BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SAG0017
(447 letters)
Database: nr
1,487,057 sequences; 479,114,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22536202|ref|NP_687053.1| pcsB protein [Streptococcus agalact... 552 e-156
gi|15341186|gb|AAK94503.1| glucan-binding protein B [Streptococc... 271 2e-71
gi|15341184|gb|AAK94502.1| glucan-binding protein B [Streptococc... 270 5e-71
gi|15341188|gb|AAK94504.1| glucan-binding protein B [Streptococc... 258 1e-67
gi|15341180|gb|AAK94500.1| glucan-binding protein B [Streptococc... 254 2e-66
gi|19745214|ref|NP_606350.1| putative secreted protein [Streptoc... 219 1e-55
gi|15674263|ref|NP_268436.1| putative secreted protein [Streptoc... 208 2e-52
gi|24378550|ref|NP_720505.1| putative secreted antigen GbpB/SagA... 189 1e-46
gi|12802877|gb|AAK08104.1|AF338445_1 immunodominant glycoprotein... 188 1e-46
gi|4098503|gb|AAD00288.1| putative secreted protein [Streptococc... 162 1e-38
gi|15902020|ref|NP_346624.1| secreted 45 kd protein [Streptococc... 158 1e-37
gi|25011844|ref|NP_736239.1| Unknown [Streptococcus agalactiae N... 130 5e-29
gi|14571814|dbj|BAB61101.1| hypothetical protein [Streptococcus ... 129 9e-29
gi|24378864|ref|NP_720819.1| hypothetical protein [Streptococcus... 129 1e-28
gi|22537901|ref|NP_688752.1| conserved hypothetical protein [Str... 125 1e-27
gi|30024649|dbj|BAC75703.1| hypothetical protein [Streptococcus ... 125 2e-27
gi|30024626|dbj|BAC75682.1| hypothetical protein [Streptococcus ... 125 2e-27
gi|24379291|ref|NP_721246.1| hypothetical protein [Streptococcus... 123 8e-27
gi|30024637|dbj|BAC75692.1| hypothetical protein [Streptococcus ... 122 9e-27
gi|129375|sp|P13692|P54_ENTFC P54 protein precursor 118 2e-25
gi|9367038|gb|AAF87093.1|AF167576_1 secreted antigen SagBb [Ente... 117 4e-25
gi|22992773|ref|ZP_00037398.1| hypothetical protein [Enterococcu... 115 1e-24
gi|18921406|gb|AAL82566.1| LcoB [Lactococcus lactis] 113 7e-24
gi|79973|pir||S05542 hypothetical protein, 54K - Enterococcus fa... 109 9e-23
gi|29375030|ref|NP_814183.1| secreted antigen, putative [Enteroc... 102 2e-20
gi|29377518|ref|NP_816672.1| secreted lipase, putative [Enteroco... 100 8e-20
gi|15674211|ref|NP_268386.1| hypothetical protein [Lactococcus l... 99 1e-19
gi|97960|pir||JN0097 secreted 45K protein precursor - Lactococcu... 99 2e-19
gi|1351383|sp|P22865|US45_LACLC Secreted 45 kDa protein precurso... 97 7e-19
gi|16801710|ref|NP_471978.1| peptidoglycan lytic protein P45 [Li... 82 3e-14
gi|20086385|dbj|BAB88830.1| hypothetical protein [Streptococcus ... 74 5e-12
gi|27467455|ref|NP_764092.1| conserved hypothetical protein [Sta... 74 6e-12
gi|20086383|dbj|BAB88829.1| hypothetical protein [Streptococcus ... 73 8e-12
gi|23099946|ref|NP_693412.1| hypothetical protein [Oceanobacillu... 72 1e-11
gi|16804543|ref|NP_466028.1| peptidoglycan lytic protein P45 [Li... 72 3e-11
gi|15923745|ref|NP_371279.1| conserved hypothetical protein [Sta... 72 3e-11
gi|20086381|dbj|BAB88828.1| hypothetical protein [Streptococcus ... 71 4e-11
gi|21282446|ref|NP_645534.1| conserved hypothetical protein [Sta... 71 5e-11
gi|20086387|dbj|BAB88831.1| hypothetical protein [Streptococcus ... 70 6e-11
gi|12957015|emb|CAC29185.1| hypothetical protein [Enterococcus f... 70 9e-11
gi|27469026|ref|NP_765663.1| secretory antigen precursor SsaA [S... 69 2e-10
gi|15925534|ref|NP_373068.1| hypothetical protein [Staphylococcu... 66 1e-09
gi|27468794|ref|NP_765431.1| secretory antigen precursor SsaA [S... 66 1e-09
gi|22324223|emb|CAD44387.1| hypothetical protein [Enterococcus f... 66 1e-09
gi|11559696|gb|AAG38044.1|AF295925_9 Orf28 [Streptococcus pneumo... 65 3e-09
gi|16080533|ref|NP_391360.1| alternate gene name: yzkA~similar t... 64 4e-09
gi|23466023|ref|NP_696626.1| possible TraG-related protein [Bifi... 64 5e-09
gi|32470414|ref|NP_863630.1| putative membrane protein TraG [Sta... 63 1e-08
gi|27468407|ref|NP_765044.1| secretory antigen SsaA-like protein... 63 1e-08
gi|27469237|ref|NP_765874.1| autolysin (N-acetylmuramoyl-L-alani... 62 2e-08
gi|1361348|pir||H36891 transfer complex protein trsG - Staphyloc... 62 2e-08
gi|27467351|ref|NP_763988.1| secretory antigen SsaA-like protein... 61 5e-08
gi|29376366|ref|NP_815520.1| N-acetylmuramoyl-L-alanine amidase,... 60 6e-08
gi|30023229|ref|NP_834860.1| N-acetylmuramoyl-L-alanine amidase ... 60 1e-07
gi|15893601|ref|NP_346950.1| Cell wall-associated hydrolase [Clo... 59 1e-07
gi|27467788|ref|NP_764425.1| secretory antigen SsaA [Staphylococ... 59 2e-07
gi|11968242|ref|NP_072029.1| traG-related protein [Enterococcus ... 59 2e-07
gi|18104297|gb|AAL59482.1|AF343839_1 conjugation protein [Entero... 59 3e-07
gi|29377838|ref|NP_816966.1| conserved hypothetical protein [Ent... 58 3e-07
gi|21397656|ref|NP_653641.1| NLPC_P60, NLP/P60 family [Bacillus ... 58 3e-07
gi|29375119|ref|NP_814272.1| conserved domain protein [Enterococ... 58 3e-07
gi|15616162|ref|NP_244467.1| cell wall-binding protein [Bacillus... 58 4e-07
gi|25011401|ref|NP_735796.1| Unknown [Streptococcus agalactiae N... 56 1e-06
gi|29374894|ref|NP_814047.1| N-acetylmuramoyl-L-alanine amidase,... 56 1e-06
gi|16804542|ref|NP_466027.1| similar to cell wall binding protei... 56 1e-06
gi|6782409|emb|CAB70620.1| transfer protein [Streptococcus therm... 55 2e-06
gi|23099858|ref|NP_693324.1| hypothetical protein [Oceanobacillu... 55 2e-06
gi|22537435|ref|NP_688286.1| Tn5252, Orf28 [Streptococcus agalac... 54 4e-06
gi|15893600|ref|NP_346949.1| Cell wall-associated hydrolase [Clo... 54 7e-06
gi|23099869|ref|NP_693335.1| hypothetical protein [Oceanobacillu... 54 7e-06
gi|21282356|ref|NP_645444.1| ORFID:MW0627~secretory antigen SsaA... 53 9e-06
gi|15675799|ref|NP_269973.1| M protein type 1 [Streptococcus py... 53 1e-05
gi|1084196|pir||S46489 M1 protein precursor - Streptococcus pyog... 53 1e-05
gi|15923655|ref|NP_371189.1| secretory antigen SsaA homologue [S... 53 1e-05
gi|23336459|ref|ZP_00121675.1| hypothetical protein [Bifidobacte... 53 1e-05
gi|30525885|gb|AAP32473.1| M protein [Streptococcus pyogenes] 52 2e-05
gi|18309260|ref|NP_561194.1| conserved hypothetical protein [Clo... 52 2e-05
gi|15902008|ref|NP_346612.1| choline binding protein D [Streptoc... 52 2e-05
gi|29347202|ref|NP_810705.1| putative cell surface protein [Bact... 52 2e-05
gi|15675802|ref|NP_269976.1| immunogenic secreted protein precur... 52 2e-05
gi|23465747|ref|NP_696350.1| hypothetical protein with weak C-te... 52 3e-05
gi|1399011|gb|AAB52379.1| immunogenic secreted protein precursor 52 3e-05
gi|23335787|ref|ZP_00121020.1| hypothetical protein [Bifidobacte... 52 3e-05
gi|421440|pir||S35401 M1 protein precursor - Streptococcus pyoge... 51 3e-05
gi|24378708|ref|NP_720663.1| putative transfer protein [Streptoc... 51 3e-05
gi|25011184|ref|NP_735579.1| unknown [Streptococcus agalactiae N... 51 3e-05
gi|15904047|ref|NP_359597.1| Choline binding protein D [Streptoc... 51 4e-05
gi|21911267|ref|NP_665535.1| immunogenic secreted protein precur... 51 4e-05
gi|19746914|ref|NP_608050.1| immunogenic secreted protein precur... 51 5e-05
gi|486711|pir||S34978 M1.1 protein precursor - Streptococcus pyo... 50 7e-05
gi|28209994|ref|NP_780938.1| putative cell wall-associated hydro... 50 8e-05
gi|21693270|gb|AAM75217.1|AF454824_11 EF0011 [Enterococcus faeca... 50 8e-05
gi|15673889|ref|NP_268064.1| N-acetylmuramidase [Lactococcus lac... 50 9e-05
gi|30018861|ref|NP_830492.1| Cell wall-binding protein [Bacillus... 50 9e-05
>gi|22536202|ref|NP_687053.1| pcsB protein [Streptococcus agalactiae
2603V/R]
gi|25010091|ref|NP_734486.1| PcsB protein [Streptococcus agalactiae
NEM316]
gi|12667037|emb|CAC28144.1| PcsB protein [Streptococcus agalactiae]
gi|22533020|gb|AAM98925.1|AE014192_1 pcsB protein [Streptococcus
agalactiae 2603V/R]
gi|23094442|emb|CAD45661.1| PcsB protein [Streptococcus agalactiae
NEM316]
Length = 447
Score = 552 bits (1422), Expect = e-156
Identities = 447/447 (100%), Positives = 447/447 (100%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQV 60
MKKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQV
Sbjct: 1 MKKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQV 60
Query: 61 GALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTNYINT 120
GALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTNYINT
Sbjct: 61 GALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTNYINT 120
Query: 121 ILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAIE 180
ILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAIE
Sbjct: 121 ILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAIE 180
Query: 181 NNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEAKAQ 240
NNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEAKAQ
Sbjct: 181 NNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEAKAQ 240
Query: 241 AEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATATN 300
AEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATATN
Sbjct: 241 AEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATATN 300
Query: 301 EPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGN 360
EPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGN
Sbjct: 301 EPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGN 360
Query: 361 YWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNY 420
YWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNY
Sbjct: 361 YWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNY 420
Query: 421 AGNMSIGNYRGSFNPSASGSVYYIYPN 447
AGNMSIGNYRGSFNPSASGSVYYIYPN
Sbjct: 421 AGNMSIGNYRGSFNPSASGSVYYIYPN 447
>gi|15341186|gb|AAK94503.1| glucan-binding protein B [Streptococcus
mutans]
Length = 432
Score = 271 bits (692), Expect = 2e-71
Identities = 268/450 (59%), Positives = 315/450 (69%), Gaps = 21/450 (4%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKKRILSAVLVSGVTL +A V ADDFD++IA+ DS IN L+ QQ AAQ QV I+G
Sbjct: 1 MKKRILSAVLVSGVTLSSATTLSAVKADDFDAQIASQDSKINNLTAQQQAAQAQVNTIQG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGN-LTNY 117
QV AL++QQ+EL+A+N +LEA S LGQ+IQTLS+KIVARNESLK+Q RSAQK N T+Y
Sbjct: 61 QVSALQTQQAELQAENQRLEAQSATLGQQIQTLSSKIVARNESLKQQARSAQKSNAATSY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
IN I+NSKSVSDA+NRV AIREVVSANEKML QQE DKAA+E K ENQ AINTVAAN++
Sbjct: 121 INAIINSKSVSDAINRVSAIREVVSANEKMLHQQEQDKAAVEQKHQENQAAINTVAANQE 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEA 237
I N AL TQ+AQLEAAQL L A+LTT Q++KA+L+ KA AEEAAR+AA AQAAAEA
Sbjct: 181 TIAQNTNALNTQQAQLEAAQLNLQAELTTAQDQKATLVAQKAAAEEAARQAAAAQAAAEA 240
Query: 238 KAQAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTAT 297
KA AEAKA E A+AQAAA + A + Q + + T S+ + A
Sbjct: 241 KAAAEAKALQEQAAQAQAAANNNNTQATDASDQQAAAADNTQAAQTGDSTDQSAAQAVNN 300
Query: 298 ATNEPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASW 357
+ E + + + + AV ++T S+NTYP GQCTWG KS+A W
Sbjct: 301 SDQESTTATAAQPSASSASTAAVAANT------------SSANTYPAGQCTWGVKSLAPW 348
Query: 358 VGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVME 417
VGNYWGN QW ASA AAGY VG+TP GAVAVW + GGYGHVA VT V IQV E
Sbjct: 349 VGNYWGNGGQWAASAAAAGYRVGSTPSAGAVAVW--NDGGYGHVAYVTGV-QGGQIQVQE 405
Query: 418 SNYAGNMSIGNYRGSFNPSASGSVYYIYPN 447
+NYAGN SIGNYRG FNP GSV YIYPN
Sbjct: 406 ANYAGNQSIGNYRGWFNP---GSVSYIYPN 432
>gi|15341184|gb|AAK94502.1| glucan-binding protein B [Streptococcus
mutans]
Length = 432
Score = 270 bits (689), Expect = 5e-71
Identities = 268/450 (59%), Positives = 316/450 (69%), Gaps = 21/450 (4%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKKRILSAVLVSGVTL +A + ADDFD++IA+ DS IN L+ QQ AAQ QV I+G
Sbjct: 1 MKKRILSAVLVSGVTLSSATTLSAIKADDFDAQIASQDSKINNLTAQQQAAQAQVNTIQG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGN-LTNY 117
QV AL++QQ+EL+A+N +LEA S LGQ+IQTLS+KIVARNESLK+Q RSAQK N T+Y
Sbjct: 61 QVSALQTQQAELQAENQRLEAQSATLGQQIQTLSSKIVARNESLKQQARSAQKSNAATSY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
IN I+NSKSVSDA+NRV AIREVVSANEKML QQE DKAA+E KQ ENQ AINTVAAN++
Sbjct: 121 INAIINSKSVSDAINRVSAIREVVSANEKMLQQQEQDKAAVEQKQQENQAAINTVAANQE 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEA 237
I N AL TQ+AQLEAAQL L A+LTT Q++KA+L+ KA AEEAAR+AA AQAAAEA
Sbjct: 181 TIAQNTNALNTQQAQLEAAQLNLQAELTTAQDQKATLVAQKAAAEEAARQAAAAQAAAEA 240
Query: 238 KAQAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTAT 297
KA AEAKA E A+AQAAA + A + Q + + T S+ + A
Sbjct: 241 KAAAEAKALQEQAAQAQAAANNNNTQATDASDQQAAAADNTQAAQTGDSTDQSAAQAVNN 300
Query: 298 ATNEPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASW 357
+ E + + + + AV ++T S+NTYP GQCTWG KS+A W
Sbjct: 301 SDQESTTATAAQPSASSASTAAVAANT------------SSANTYPAGQCTWGVKSLAPW 348
Query: 358 VGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVME 417
VGNYWGN QW ASA AAGY VG+TP GAVAVW + GGYGHVA VT V IQV E
Sbjct: 349 VGNYWGNGGQWAASAAAAGYRVGSTPSAGAVAVW--NDGGYGHVAYVTGV-QGGQIQVQE 405
Query: 418 SNYAGNMSIGNYRGSFNPSASGSVYYIYPN 447
+NYAGN SIGNYRG FNP GSV YIYPN
Sbjct: 406 ANYAGNQSIGNYRGWFNP---GSVSYIYPN 432
>gi|15341188|gb|AAK94504.1| glucan-binding protein B [Streptococcus
mutans]
Length = 431
Score = 258 bits (660), Expect = 1e-67
Identities = 254/450 (56%), Positives = 299/450 (66%), Gaps = 22/450 (4%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKKRILSAVLVSGVTL +A V ADDFD++IA+ DS IN L+ QQ AAQ QV I+G
Sbjct: 1 MKKRILSAVLVSGVTLSSATTLSAVKADDFDAQIASQDSKINNLTAQQQAAQAQVNTIQG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGN-LTNY 117
QV AL++QQ+EL+A+N +LEA S LGQ+IQTLS+KIVARNESLK+Q RSAQK N T+Y
Sbjct: 61 QVSALQTQQAELQAENQRLEAQSATLGQQIQTLSSKIVARNESLKQQARSAQKSNAATSY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
IN I+NSKSVSDA+NRV AIREVVSANEKML QQE DKAA+E KQ ENQ AINTVAAN++
Sbjct: 121 INAIINSKSVSDAINRVSAIREVVSANEKMLQQQEQDKAAVEQKQQENQAAINTVAANQE 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEA 237
I N AL TQ+AQLEAAQL L A+LTT Q++KA+L+ +A A A A A
Sbjct: 181 TIAQNTNALNTQQAQLEAAQLNLQAELTTAQDQKATLV--AQKAAAEEAARQAAAAQAAA 238
Query: 238 KAQAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTAT 297
+A+A A+A+A AQA A + T T+ Q S A
Sbjct: 239 EAKAAAEAKALQEQAAQAQAAANNNTQATDASDQQAAAADNTQAAQTGDSTEQSAAQAVN 298
Query: 298 ATNEPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASW 357
+++ T A A AVV++ + S+NTYP GQCTWG KS+A W
Sbjct: 299 NSDQESTTATEAQPSASSASTAVVTA-----------NTSSANTYPAGQCTWGVKSLAPW 347
Query: 358 VGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVME 417
VGNYWGN QW ASA AAGY VG+TP GAVAVW + GGYGHVA VT V IQV E
Sbjct: 348 VGNYWGNGGQWAASAAAAGYRVGSTPSAGAVAVW--NDGGYGHVAYVTGV-QGGQIQVQE 404
Query: 418 SNYAGNMSIGNYRGSFNPSASGSVYYIYPN 447
+NYAGN SIGNYRG FNP GSV YIYPN
Sbjct: 405 ANYAGNQSIGNYRGWFNP---GSVSYIYPN 431
>gi|15341180|gb|AAK94500.1| glucan-binding protein B [Streptococcus
mutans]
Length = 431
Score = 254 bits (649), Expect = 2e-66
Identities = 265/450 (58%), Positives = 312/450 (68%), Gaps = 22/450 (4%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKKRILSAVLVSGVTL +A V ADDFD++IA+ DS IN L+ QQ AAQ QV I+G
Sbjct: 1 MKKRILSAVLVSGVTLSSATTLSAVKADDFDAQIASQDSKINNLTAQQQAAQAQVNTIQG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGN-LTNY 117
QV AL++QQ+EL+A+N +LEA S LGQ+IQTLS+KIVARNESLK+Q RSAQK N T+Y
Sbjct: 61 QVSALQTQQAELQAENQRLEAQSATLGQQIQTLSSKIVARNESLKQQARSAQKSNAATSY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
IN I+NSKSVSDA+NRV AIREVVSANEKML QQE DKAA+E KQ ENQ AINTVAAN++
Sbjct: 121 INAIINSKSVSDAINRVSAIREVVSANEKMLQQQEQDKAAVEQKQQENQAAINTVAANQE 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEA 237
I N AL TQ+AQLEAAQL L A+LTT Q++KA+L+ KA AEEAAR+AA AQAAAEA
Sbjct: 181 TIAQNTNALNTQQAQLEAAQLNLQAELTTAQDQKATLVAQKAAAEEAARQAAAAQAAAEA 240
Query: 238 KAQAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTAT 297
KA AEAKA E A+AQ AA + A + Q + + T S+ + A
Sbjct: 241 KAAAEAKALQEQAAQAQVAAN-NNTQATDASDQQAAAADNTQAAQTGDSTEQSAAQAVNN 299
Query: 298 ATNEPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASW 357
+ E + + + + AV ++T A + P GQCTWG KS+A W
Sbjct: 300 SDQESTTATEAQPSASSASTAAVAANTSSANTYPA------------GQCTWGVKSLAPW 347
Query: 358 VGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVME 417
VGNYWGN QW ASA AAGY VG+TP GAVAVW + GGYGHVA VT V IQV E
Sbjct: 348 VGNYWGNGGQWAASAAAAGYRVGSTPSAGAVAVW--NDGGYGHVAYVTGV-QGGQIQVQE 404
Query: 418 SNYAGNMSIGNYRGSFNPSASGSVYYIYPN 447
+NYAGN SIGNYRG FNP GSV YIYPN
Sbjct: 405 ANYAGNQSIGNYRGWFNP---GSVSYIYPN 431
>gi|19745214|ref|NP_606350.1| putative secreted protein
[Streptococcus pyogenes MGAS8232]
gi|21909550|ref|NP_663818.1| putative secreted protein
[Streptococcus pyogenes MGAS315]
gi|28894927|ref|NP_801277.1| putative secreted protein
Streptputative secreted protein [Streptococcus pyogenes
SSI-1]
gi|19747305|gb|AAL96849.1| putative secreted protein [Streptococcus
pyogenes MGAS8232]
gi|21903730|gb|AAM78621.1| putative secreted protein [Streptococcus
pyogenes MGAS315]
gi|28810172|dbj|BAC63110.1| putative secreted protein
Streptputative secreted protein [Streptococcus pyogenes
SSI-1]
Length = 398
Score = 219 bits (557), Expect = 1e-55
Identities = 208/448 (46%), Positives = 275/448 (60%), Gaps = 51/448 (11%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQV 60
MKKRILSAVLVSGVTLG AA TV A+D +KIA DS+I+ L+ +Q AAQNQV+A++ QV
Sbjct: 1 MKKRILSAVLVSGVTLG-AATTVGAEDLSTKIAKQDSIISNLTTEQKAAQNQVSALQAQV 59
Query: 61 GALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTN-YIN 119
+L+S+Q +L A+N +LEA+S++ QEI+ L+++IVARNE LK Q RSA K N T+ YIN
Sbjct: 60 SSLQSEQDKLTARNTELEALSKRFEQEIKALTSQIVARNEKLKNQARSAYKNNETSGYIN 119
Query: 120 TILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAI 179
+LNSKS+SD VNR+VAI VSAN K+L QQ+ADK +LE KQ NQ AINT+AAN
Sbjct: 120 ALLNSKSISDVVNRLVAINRAVSANAKLLEQQKADKVSLEEKQAANQTAINTIAANMAMA 179
Query: 180 ENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEAKA 239
E N+ L TQ+A LEAA L+ QL + +KA+L+ K AE+AA +A + AA+ KA
Sbjct: 180 EENQNTLRTQQANLEAATANLALQLASATEDKANLVAQKEAAEKAAAEALAQEQAAKVKA 239
Query: 240 QAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATAT 299
Q +A QA SV A++A AP T Q I+P+ LTA ++ + T+ ++
Sbjct: 240 QEQAAQQAASVEAAKSAI----TPAPQATPAAQSSNAIEPAALTAPAAPSARPQTSYDSS 295
Query: 300 NEPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVG 359
N V Q + K++ P WG
Sbjct: 296 NTYPVGQCTWGAKSLA---------------------------PWAGNNWG--------- 319
Query: 360 NYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESN 419
N QW SA+AAGY G+TP VGA+AVW + GGYGHVAVV V + SSI+VMESN
Sbjct: 320 ----NGGQWAYSAQAAGYRTGSTPMVGAIAVW--NDGGYGHVAVVVEVQSASSIRVMESN 373
Query: 420 YAGNMSIGNYRGSFNPSASGSVYYIYPN 447
Y+G I ++RG FNP+ V +IYP+
Sbjct: 374 YSGRQYIADHRGWFNPTG---VTFIYPH 398
>gi|15674263|ref|NP_268436.1| putative secreted protein
[Streptococcus pyogenes]
gi|13621340|gb|AAK33158.1| putative secreted protein [Streptococcus
pyogenes M1 GAS]
gi|18478356|gb|AAL73135.1| secreted protein SibA precursor
[Streptococcus pyogenes]
Length = 398
Score = 208 bits (529), Expect = 2e-52
Identities = 205/448 (45%), Positives = 272/448 (59%), Gaps = 51/448 (11%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQV 60
MKKRILSAVLVSGVTLG AA TV A+D +KIA DS+I+ L+ +Q AAQNQV+A++ QV
Sbjct: 1 MKKRILSAVLVSGVTLG-AATTVGAEDLSTKIAKQDSIISNLTTEQKAAQNQVSALQAQV 59
Query: 61 GALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTN-YIN 119
+L+S+Q +L A+N +LEA+S++ QEI+ L+++IVARNE LK Q RSA K N T+ YIN
Sbjct: 60 SSLQSEQDKLTARNTELEALSKRFEQEIKALTSQIVARNEKLKNQARSAYKNNETSGYIN 119
Query: 120 TILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAI 179
+LNSKS+SD VNR+VAI VSAN K+L QQ+ADK +LE KQ NQ AINT+AAN
Sbjct: 120 ALLNSKSISDVVNRLVAINRAVSANAKLLEQQKADKVSLEEKQAANQTAINTIAANMAMA 179
Query: 180 ENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEAKA 239
E N+ L TQ+A L AA L+ QL + +KA+L+ K AE+AA +A + AA+ KA
Sbjct: 180 EENQNTLRTQQANLVAATANLALQLASATEDKANLVAQKEAAEKAAAEALAQEQAAKVKA 239
Query: 240 QAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATAT 299
Q +A QA SV A++A AP T Q I+P+ LTA ++ + T+ ++
Sbjct: 240 QEQAAQQAASVEAAKSAI----TPAPQATPAAQSSNAIEPAALTAPAAPSAGPQTSYDSS 295
Query: 300 NEPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVG 359
N V Q + K++ P WG G
Sbjct: 296 NTYPVGQCTWGAKSLA---------------------------PWAGNNWGN-------G 321
Query: 360 NYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESN 419
W + Q AAGY G+TP VGA+AVW + GGYGHVAVV V + SSI+VMESN
Sbjct: 322 GQWAYSAQ------AAGYRTGSTPMVGAIAVW--NDGGYGHVAVVVEVQSASSIRVMESN 373
Query: 420 YAGNMSIGNYRGSFNPSASGSVYYIYPN 447
Y+G I ++RG FNP+ V +IYP+
Sbjct: 374 YSGRQYIADHRGWFNPTG---VTFIYPH 398
>gi|24378550|ref|NP_720505.1| putative secreted antigen GbpB/SagA;
putative peptidoglycan hydrolase [Streptococcus mutans
UA159]
gi|24376400|gb|AAN57811.1|AE014855_1 putative secreted antigen
GbpB/SagA; putative peptidoglycan hydrolase
[Streptococcus mutans UA159]
Length = 431
Score = 189 bits (480), Expect = 1e-46
Identities = 151/218 (69%), Positives = 178/218 (81%), Gaps = 3/218 (1%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKKRILSAVLVSGVTL +A V ADDFD++IA+ DS IN L+ QQ AAQ QV I+G
Sbjct: 1 MKKRILSAVLVSGVTLSSATTLSAVKADDFDAQIASQDSKINNLTAQQQAAQAQVNTIQG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGN-LTNY 117
QV AL++QQ+EL+A+N +LEA S LGQ+IQTLS+KIVARNESLK+Q RSAQK N T+Y
Sbjct: 61 QVSALQTQQAELQAENQRLEAQSATLGQQIQTLSSKIVARNESLKQQARSAQKSNAATSY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
IN I+NSKSVSDA+NRV AIREVVSANEKML QQE DKAA+E KQ ENQ AINTVAAN++
Sbjct: 121 INAIINSKSVSDAINRVSAIREVVSANEKMLQQQEQDKAAVEQKQQENQAAINTVAANQE 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLI 215
I N AL TQ+AQLEAAQL L A+LTT Q++KA+L+
Sbjct: 181 TIAQNTNALNTQQAQLEAAQLNLQAELTTAQDQKATLV 218
>gi|12802877|gb|AAK08104.1|AF338445_1 immunodominant glycoprotein
IDG-60; general stress protein GSP-781 [Streptococcus
mutans]
gi|15341182|gb|AAK94501.1| glucan-binding protein B [Streptococcus
mutans]
Length = 431
Score = 188 bits (478), Expect = 1e-46
Identities = 151/218 (69%), Positives = 178/218 (81%), Gaps = 3/218 (1%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKKRILSAVLVSGVTL +A V ADDFD++IA+ DS IN L+ QQ AAQ QV I+G
Sbjct: 1 MKKRILSAVLVSGVTLSSATTLSAVKADDFDAQIASQDSKINNLTAQQQAAQAQVNTIQG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGN-LTNY 117
QV AL++QQ+EL+A+N +LEA S LGQ+IQTLS+KIVARNESLK+Q RSAQK N T+Y
Sbjct: 61 QVSALQTQQAELQAENQRLEAQSATLGQQIQTLSSKIVARNESLKQQARSAQKSNAATSY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
IN I+NSKSVSDA+NRV AIREVVSANEKML QQE DKAA+E KQ ENQ AINTVAAN++
Sbjct: 121 INAIINSKSVSDAINRVSAIREVVSANEKMLQQQEQDKAAVEQKQQENQAAINTVAANQE 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLI 215
I N AL TQ+AQLEAAQL L A+LTT Q++KA+L+
Sbjct: 181 TIAQNTNALNTQQAQLEAAQLNLQAELTTAQDQKATLV 218
>gi|4098503|gb|AAD00288.1| putative secreted protein [Streptococcus
mutans]
Length = 211
Score = 162 bits (410), Expect = 1e-38
Identities = 143/211 (67%), Positives = 170/211 (79%), Gaps = 3/211 (1%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKKRILSAVLVSGVTL +A V ADDFD++IA+ DS IN L+ QQ ++++ I+G
Sbjct: 1 MKKRILSAVLVSGVTLSSATTLSAVKADDFDAQIASQDSKINNLTAQQQQHKHKLITIQG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGN-LTNY 117
QV AL++QQ+EL+A+N +LEA S LGQ+IQTLS+KIVARNESLK+Q RSAQK N T+Y
Sbjct: 61 QVSALQTQQAELQAENQRLEAQSATLGQQIQTLSSKIVARNESLKQQARSAQKSNAATSY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
IN I+NSKSVSDA+NRV AIREVVSANEKML QQE DKAA+E KQ ENQ AINTVAAN++
Sbjct: 121 INAIINSKSVSDAINRVSAIREVVSANEKMLQQQEQDKAAVEQKQQENQAAINTVAANQE 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQ 208
I N AL TQ+AQLEAAQL L A+LTT Q
Sbjct: 181 TIAQNTNALNTQQAQLEAAQLNLQAELTTAQ 211
>gi|15902020|ref|NP_346624.1| secreted 45 kd protein [Streptococcus
pneumoniae TIGR4]
gi|15904062|ref|NP_359612.1| General stress protein GSP-781
[Streptococcus pneumoniae R6]
gi|25389634|pir||G95258 secreted 45 kd protein [imported] -
Streptococcus pneumoniae (strain TIGR4)
gi|25509428|pir||B98124 general stress protein GSP-781 [imported] -
Streptococcus pneumoniae (strain R6)
gi|14973726|gb|AAK76264.1| secreted 45 kd protein [Streptococcus
pneumoniae TIGR4]
gi|15459727|gb|AAL00823.1| General stress protein GSP-781
[Streptococcus pneumoniae R6]
Length = 392
Score = 158 bits (400), Expect = 1e-37
Identities = 140/308 (45%), Positives = 199/308 (64%), Gaps = 13/308 (4%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKK+IL+++L+S V + AV T +A+ D KIAA D+ I+ L+ QQ AQ QV I+
Sbjct: 1 MKKKILASLLLSTVMVSQVAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQE 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNY 117
QV A++++QS L+A+N +L+A S++L EI LS IV+RN+SL+KQ RSAQ G +T+Y
Sbjct: 61 QVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAVTSY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
INTI+NSKS+++A++RV A+ E+VSAN KML QQ+ADK A+ KQ+ N +AINTV AN+Q
Sbjct: 121 INTIVNSKSITEAISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQ 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQ---AA 234
+ ++ AL T++A+L+AA+L L+A+ T + EKASL++ KA AE AR AA A+
Sbjct: 181 KLADDAQALTTKQAELKAAELSLAAEKATAEGEKASLLEQKAAAEAEARAAAVAEAAYKE 240
Query: 235 AEAKAQAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATT 294
A Q A A + AQ A ESA AP R +++P+ T SS T
Sbjct: 241 KRASQQQSVLASANTNLTAQVQAVSESAAAPV-------RAKVRPTYSTNASSYPIGECT 293
Query: 295 TATATNEP 302
T P
Sbjct: 294 WGVKTLAP 301
>gi|25011844|ref|NP_736239.1| Unknown [Streptococcus agalactiae
NEM316]
gi|24413385|emb|CAD47464.1| Unknown [Streptococcus agalactiae
NEM316]
Length = 169
Score = 130 bits (326), Expect = 5e-29
Identities = 67/125 (53%), Positives = 88/125 (69%), Gaps = 6/125 (4%)
Query: 327 AVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSVGTTPRVG 386
A ++ + +++ +SNT+P+GQCTWG K MA+W GN+WGN W ASA +AGY+VGT PRVG
Sbjct: 47 ASAEEIAQAHPASNTFPLGQCTWGVKEMATWAGNWWGNGGDWAASAASAGYTVGTQPRVG 106
Query: 387 AVAVWPYDGGGYGHVAVVTSV-ANNSSIQVMESNYAGNMSIGNYRGSFNP---SASGSVY 442
++ W G YGHVA VT+V + IQV+ESNYAG+ I NYRG F+P + G V
Sbjct: 107 SIVCW--TDGSYGHVAYVTAVDPVTNKIQVLESNYAGHQWIDNYRGWFDPQNTATPGVVS 164
Query: 443 YIYPN 447
YIYPN
Sbjct: 165 YIYPN 169
>gi|14571814|dbj|BAB61101.1| hypothetical protein [Streptococcus
intermedius]
Length = 226
Score = 129 bits (324), Expect = 9e-29
Identities = 83/201 (41%), Positives = 114/201 (56%), Gaps = 15/201 (7%)
Query: 260 ESATAPTETVQ-------TQPRTEIKPSNLTATSSAT---TVATTTATATNEPKVTQPSV 309
+ A A T TVQ + + P +L A + T T+ N + V
Sbjct: 28 QQANADTYTVQYGDSFYAIATKYGMSPYDLAAKNGKTIYDTILPGDVLQVNGARANTYQV 87
Query: 310 VTKAVEAPKAVVSSTPRAVSKPVVRSYDSS--NTYPMGQCTWGAKSMASWVGNYWGNANQ 367
+A A +S + ++ VV + ++ N+YP+GQCTWG KS+A W N+WGNA
Sbjct: 88 SNQATTAQATNANSGADSDTENVVLNTPTATGNSYPIGQCTWGVKSLAPWASNWWGNAKD 147
Query: 368 WGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIG 427
W +A +G+ +GTTP+VGA+AVW +GG YGHVA VT+VANN +IQV+ESNY I
Sbjct: 148 WATNAAYSGFRIGTTPQVGAIAVW--NGGQYGHVAYVTAVANNRAIQVLESNYKRQKQIN 205
Query: 428 NYRGSFNPSA-SGSVYYIYPN 447
NYRG F+P+ G V YIYPN
Sbjct: 206 NYRGWFDPTTFYGKVTYIYPN 226
>gi|24378864|ref|NP_720819.1| hypothetical protein [Streptococcus
mutans UA159]
gi|24376743|gb|AAN58125.1|AE014884_3 hypothetical protein
[Streptococcus mutans UA159]
Length = 211
Score = 129 bits (324), Expect = 1e-28
Identities = 61/113 (53%), Positives = 80/113 (69%), Gaps = 5/113 (4%)
Query: 338 SSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGG 397
++NTYP+GQCTWG K++A+W G++WGN W +SA A GY+VG TP VG++ W GG
Sbjct: 101 NANTYPVGQCTWGVKAVATWAGDWWGNGGDWASSASAQGYTVGNTPAVGSIMCW--TDGG 158
Query: 398 YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSAS---GSVYYIYPN 447
YGHVA VT+V + +QV+ESNY + NYRG F+P+ S GSV YIYPN
Sbjct: 159 YGHVAYVTAVGEDGKVQVLESNYKDQQWVDNYRGWFDPNNSGTPGSVSYIYPN 211
>gi|22537901|ref|NP_688752.1| conserved hypothetical protein
[Streptococcus agalactiae 2603V/R]
gi|22534798|gb|AAN00625.1|AE014271_20 conserved hypothetical
protein [Streptococcus agalactiae 2603V/R]
Length = 169
Score = 125 bits (315), Expect = 1e-27
Identities = 66/125 (52%), Positives = 87/125 (68%), Gaps = 6/125 (4%)
Query: 327 AVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSVGTTPRVG 386
A ++ + +++ +SNT+P+GQCTWG K MA+W GN+WGN W ASA +A Y+VGT PRVG
Sbjct: 47 ASAEEIAQAHPASNTFPLGQCTWGVKEMATWAGNWWGNGGDWAASAASADYTVGTQPRVG 106
Query: 387 AVAVWPYDGGGYGHVAVVTSV-ANNSSIQVMESNYAGNMSIGNYRGSFNPSAS---GSVY 442
++ W G YGHVA VT+V + IQV+ESNYAG+ I NYRG F+P + G V
Sbjct: 107 SIVCW--TDGSYGHVAYVTAVDPVTNKIQVLESNYAGHQWIDNYRGWFDPQNTVTPGVVS 164
Query: 443 YIYPN 447
YIYPN
Sbjct: 165 YIYPN 169
>gi|30024649|dbj|BAC75703.1| hypothetical protein [Streptococcus
mutans]
Length = 544
Score = 125 bits (314), Expect = 2e-27
Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 6/130 (4%)
Query: 320 VVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSV 379
+V P AV + + NTYP+GQCTWG K +A W+ N+ GN QW ++A G+ +
Sbjct: 419 IVHYQPSAVR--ITAYMNEKNTYPVGQCTWGVKELAPWIPNWLGNGGQWASTAAVKGFKI 476
Query: 380 GTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSAS- 438
GT P+VGA+A W GGYGHVA VT V +N+ IQV E+NY I N+RG F+P+AS
Sbjct: 477 GTVPKVGAIACW--SDGGYGHVAYVTHVESNNRIQVKEANYKNQQYISNFRGWFDPTASY 534
Query: 439 -GSVYYIYPN 447
G + YIYP+
Sbjct: 535 LGRLTYIYPD 544
>gi|30024626|dbj|BAC75682.1| hypothetical protein [Streptococcus
mutans]
Length = 544
Score = 125 bits (313), Expect = 2e-27
Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 6/130 (4%)
Query: 320 VVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSV 379
+V P AV + + NTYP+GQCTWG K +A W+ N+ GN QW ++A G+ +
Sbjct: 419 IVHYQPSAVR--ITAYMNEKNTYPVGQCTWGVKELAPWIPNWLGNGGQWASTAAVKGFKI 476
Query: 380 GTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSAS- 438
GT P+VGA+A W GGYGHVA VT V +N+ IQV E+NY I N+RG F+P+AS
Sbjct: 477 GTVPKVGAIACW--SDGGYGHVAYVTHVESNNRIQVKEANYKNQQYISNFRGWFDPTASY 534
Query: 439 -GSVYYIYPN 447
G + YIYP+
Sbjct: 535 LGRLTYIYPD 544
>gi|24379291|ref|NP_721246.1| hypothetical protein [Streptococcus
mutans UA159]
gi|24377211|gb|AAN58552.1|AE014925_3 hypothetical protein
[Streptococcus mutans UA159]
Length = 544
Score = 123 bits (308), Expect = 8e-27
Identities = 60/130 (46%), Positives = 81/130 (62%), Gaps = 6/130 (4%)
Query: 320 VVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSV 379
+V P AV + + NTYP+GQCTWG K +A W+ N+ GN QW ++ G+ +
Sbjct: 419 IVHYQPSAVR--ITAYMNEKNTYPVGQCTWGVKELAPWIPNWLGNGGQWASTVAVKGFKI 476
Query: 380 GTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSAS- 438
GT P+VGA+A W GGYGHVA VT V +N+ IQV E+NY I N+RG F+P+ S
Sbjct: 477 GTVPKVGAIACW--SDGGYGHVAYVTHVESNNRIQVKEANYKNQQYISNFRGWFDPTTSY 534
Query: 439 -GSVYYIYPN 447
G + YIYP+
Sbjct: 535 LGRLTYIYPD 544
>gi|30024637|dbj|BAC75692.1| hypothetical protein [Streptococcus
mutans]
Length = 544
Score = 122 bits (307), Expect = 9e-27
Identities = 60/130 (46%), Positives = 82/130 (62%), Gaps = 6/130 (4%)
Query: 320 VVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSV 379
+V P AV + + NTYP+GQCTWG K +A W+ N+ GN QW ++A G+ +
Sbjct: 419 IVHYQPSAVR--ITAYMNEKNTYPVGQCTWGVKELAPWIPNWLGNGGQWASTAAVKGFKI 476
Query: 380 GTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSAS- 438
GT P++GA+A W GGYGHVA VT V +N+ IQV E+NY I N+RG F+P+A
Sbjct: 477 GTVPKIGAIACW--SDGGYGHVAYVTHVESNNRIQVKEANYKNQQYISNFRGWFDPTAPY 534
Query: 439 -GSVYYIYPN 447
G + YIYP+
Sbjct: 535 LGRLTYIYPD 544
>gi|129375|sp|P13692|P54_ENTFC P54 protein precursor
Length = 516
Score = 118 bits (295), Expect = 2e-25
Identities = 92/236 (38%), Positives = 146/236 (60%), Gaps = 4/236 (1%)
Query: 1 MKKRILSAVLVSGVTLGT--AAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKK +LSAV++S + L + + ADDFDS+I D I L QQA+AQ+Q+ A++G
Sbjct: 1 MKKSLLSAVMLSSIALTAVGSPIAAAADDFDSQIQQQDKKIADLQNQQASAQSQIEALEG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNY 117
QV A+ ++ +L + L S QL QEI+ L +I R +++KQ R Q K +NY
Sbjct: 61 QVSAINTKAQDLLTKQDTLRKESAQLKQEIKDLQERIEKREATIQKQARETQVKNTSSNY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
I+ +LN+ S++DAV R+ A+ +V AN+ ++ QQ+ DK A+EAK+ EN+ +A N+
Sbjct: 121 IDAVLNADSLADAVGRIQAMSTIVKANQDLVQQQKEDKQAVEAKKAENEAKQKELADNQA 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAE-EAARKAAEAQ 232
A+E+ K L ++A L + L+A+ T +++KA L + KA+AE E AR +A+
Sbjct: 181 ALESQKGDLLAKQADLNVLKTSLAAEQATAEDKKADLNRKKAEAEAEQARIREQAR 236
>gi|9367038|gb|AAF87093.1|AF167576_1 secreted antigen SagBb
[Enterococcus hirae]
Length = 576
Score = 117 bits (293), Expect = 4e-25
Identities = 92/236 (38%), Positives = 146/236 (60%), Gaps = 4/236 (1%)
Query: 1 MKKRILSAVLVSGVTLGT--AAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKK +LSAV++S + L + + ADDFDS+I D I L QQA+AQ+Q+ A++G
Sbjct: 1 MKKSLLSAVMLSSIALTAVGSPIAAAADDFDSQIQQQDKKIADLQNQQASAQSQIEALEG 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNY 117
QV A+ ++ +L + L S QL QEI+ L +I R +++KQ R Q K +NY
Sbjct: 61 QVSAINTKAQDLLTKQDTLRKESAQLKQEIKDLQERIEKREATIQKQARETQVKNTSSNY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
I+ +LN+ S++DAV R+ A+ +V AN+ ++ QQ+ DK A+EAK+ EN+ +A N+
Sbjct: 121 IDAVLNADSLADAVGRIQAMSTIVKANQDLVQQQKEDKQAVEAKKAENEAKQKELADNQA 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAE-EAARKAAEAQ 232
A+E+ K L ++A L + L+A+ T +++KA L + KA+AE E AR +A+
Sbjct: 181 ALESQKGDLLAKQADLNVLKTSLAAEQATAEDKKADLNRKKAEAEAEQARIREQAR 236
>gi|22992773|ref|ZP_00037398.1| hypothetical protein [Enterococcus
faecium]
gi|9246950|gb|AAF86217.1|AF242196_3 SagA [Enterococcus faecium]
gi|9367036|gb|AAF87092.1|AF167575_2 secreted antigen SagA
[Enterococcus faecium]
Length = 524
Score = 115 bits (288), Expect = 1e-24
Identities = 88/235 (37%), Positives = 141/235 (59%), Gaps = 3/235 (1%)
Query: 1 MKKRILSAVLVSGVTL--GTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKK ++SAV+V +TL + + ADDFDS+I D I L QQA AQ+Q+ A++
Sbjct: 1 MKKSLISAVMVCSMTLTAVASPIAAAADDFDSQIQQQDQKIADLKNQQADAQSQIDALES 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNL-TNY 117
QV + +Q +L A+ L S QL ++I L +I R ++++KQ R AQ N +NY
Sbjct: 61 QVSEINTQAQDLLAKQDTLRQESAQLVKDIADLQERIEKREDTIQKQAREAQVSNTSSNY 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
I+ +LN+ S++DA+ RV A+ +V AN ++ QQ+ DK A+E K+ EN + +A N+
Sbjct: 121 IDAVLNADSLADAIGRVQAMTTMVKANNDLMEQQKQDKKAVEDKKAENDAKLKELAENQA 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQ 232
A+E+ K L +++A L + L+A+ T +++KA L + KA+AE + E Q
Sbjct: 181 ALESQKGDLLSKQADLNVLKTSLAAEQATAEDKKADLNRQKAEAEAEQARIREQQ 235
>gi|18921406|gb|AAL82566.1| LcoB [Lactococcus lactis]
Length = 470
Score = 113 bits (282), Expect = 7e-24
Identities = 125/464 (26%), Positives = 214/464 (45%), Gaps = 32/464 (6%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNA-DDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQ 59
MKK+++S++++S + L + + D + IA + I ++ AQ+QV +I+ +
Sbjct: 1 MKKKLISSLVISTIILSVVSPSYEGVADTSADIANQEVTIANAQSEKDKAQSQVDSIQIK 60
Query: 60 VGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTN-YI 118
+ L QQ + + ++ ++ L Q+I+ LS I R SL+ Q RSAQ N +N
Sbjct: 61 IDNLIKQQKNTKKKIEDIKNEARALNQQIENLSQSIADRTNSLEAQARSAQVNNSSNSSF 120
Query: 119 NTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQA 178
+T++NSKS+++A+ R+ AI V SAN++M+ +Q ++ AL + N K+
Sbjct: 121 DTVINSKSLTEAIQRITAIATVSSANKQMIDEQIKEQKALNKTSDTVKQNYNQYENLKKN 180
Query: 179 IENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAE-------EAARKAAEA 231
++ L+TQ+A L A L A + Q++KA LI+ + AE E ARK AE
Sbjct: 181 LDAQANDLSTQQANLRVATLNYQATIEAAQDKKAKLIKQRIAAEEIAKKEAEKARKVAEV 240
Query: 232 QAAAEAKAQAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTV 291
QA AE + + + E+V+ + V S ++ ++ T + S + SS+T+
Sbjct: 241 QAVAEETYKQQTRFVKENVSSTK---NVSSTSSFNDSTSTGSKESSSTSTDSKESSSTST 297
Query: 292 ATTTATATNEPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSS---NTYPMGQCT 348
+ +++T+ S T + E+ S + + ++ + N Y G CT
Sbjct: 298 DSKESSSTSTDSKESSSTSTDSKESSSTSTDSKESSDNNSIIPPKTGTPGYNPYAGGGCT 357
Query: 349 WGAKSMASWVGNYW-----GNANQWGASARAAGYSVGTTPRVGAVAVWPYD--------- 394
+ G Y GN WG + G T G +A D
Sbjct: 358 DYVWQFFAAKGIYIANIVNGNGGFWGTNGVTQGVLRRTALAPGVIASGFTDQFTGYGTST 417
Query: 395 ---GGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNP 435
YGHVAVVT+V + + V E+ Y G GN R + +P
Sbjct: 418 TSGSSPYGHVAVVTAVHPDGTFDVQEAGYGGAFPWGNVRKNLSP 461
>gi|79973|pir||S05542 hypothetical protein, 54K - Enterococcus
faecium
gi|43334|emb|CAA34442.1| unnamed protein product [Enterococcus
faecium]
Length = 507
Score = 109 bits (273), Expect = 9e-23
Identities = 88/230 (38%), Positives = 141/230 (61%), Gaps = 5/230 (2%)
Query: 5 ILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQVGALE 64
+LS++ ++ V AA ADDFDS+I D I L QQA+AQ+Q+ A++GQV A+
Sbjct: 1 MLSSIALTAVGSPIAAA---ADDFDSQIQQQDKKIADLQNQQASAQSQIEALEGQVSAIN 57
Query: 65 SQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNYINTILN 123
++ +L + L S QL QEI+ L +I R +++KQ R Q K +NYI+ +LN
Sbjct: 58 TKAQDLLTKQDTLRKESAQLKQEIKDLQERIEKREATIQKQARETQVKNTSSNYIDAVLN 117
Query: 124 SKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAIENNK 183
+ S++DAV R+ A+ +V AN+ ++ QQ+ DK A+EAK+ EN+ +A N+ A+E+ K
Sbjct: 118 ADSLADAVGRIQAMSTIVKANQDLVQQQKEDKQAVEAKKAENEAKQKELADNQAALESQK 177
Query: 184 AALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAE-EAARKAAEAQ 232
L ++A L + L+A+ T +++KA L + KA+AE E AR +A+
Sbjct: 178 GDLLAKQADLNVLKTSLAAEQATAEDKKADLNRKKAEAEAEQARIREQAR 227
>gi|29375030|ref|NP_814183.1| secreted antigen, putative
[Enterococcus faecalis V583]
gi|14906082|gb|AAK72498.1| SalB antigen [Enterococcus faecalis]
gi|29342489|gb|AAO80254.1| secreted antigen, putative [Enterococcus
faecalis V583]
Length = 449
Score = 102 bits (253), Expect = 2e-20
Identities = 69/217 (31%), Positives = 127/217 (57%), Gaps = 3/217 (1%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKKR+ ++VL+ +TL A AD+ D KI + I++L +Q +QV++++
Sbjct: 1 MKKRLFASVLLCSLTLSAIATPSIALADNVDKKIEEKNQEISSLKAKQGDLASQVSSLEA 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNY 117
+V ++ + L Q L+A S+QL QEI L+ +I RNE++K Q R Q G T
Sbjct: 61 EVSSVFDESMALREQKQTLKAKSEQLQQEITNLNQRIEKRNEAIKNQARDVQVNGQSTTM 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
++ +L++ SV+DA++RV A+ +VSAN ++ QQ+ DK A+ K+ EN+ + + A +
Sbjct: 121 LDAVLDADSVADAISRVQAVSTIVSANNDLMQQQKEDKQAVVDKKAENEKKVKQLEATEA 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASL 214
+E + L +++++L + L+ + ++ ++ KA L
Sbjct: 181 ELETKRQDLLSKQSELNVMKASLALEQSSAESSKAGL 217
>gi|29377518|ref|NP_816672.1| secreted lipase, putative
[Enterococcus faecalis V583]
gi|14906074|gb|AAK72497.1| SalA antigen [Enterococcus faecalis]
gi|29344985|gb|AAO82742.1| secreted lipase, putative [Enterococcus
faecalis V583]
Length = 482
Score = 99.8 bits (247), Expect = 8e-20
Identities = 75/226 (33%), Positives = 125/226 (55%), Gaps = 3/226 (1%)
Query: 1 MKKRILSAVLVSGVTLGTAAV--TVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKG 58
MKK +LSA++V +TL + A+ AD++D+KI D IN L+ Q + A+ +V AI+
Sbjct: 1 MKKSVLSALMVCSITLTSVALPSAAFADEYDTKIQQQDQKINALTSQMSDAEAKVAAIEN 60
Query: 59 QVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNY 117
+ Q L A+ +L + +L EI L+ +I R + KQ R Q G +
Sbjct: 61 DMVETAKQIDTLTAKKNKLSSEVSKLYSEISDLNVRIQKREVQMTKQARDVQVNGQSDSI 120
Query: 118 INTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQ 177
I+ +L++ SV+DA+ RV A+ ++SAN ++L QQ+ DKA +E K + I + A +
Sbjct: 121 IDAVLDADSVADAIGRVQAVSTMMSANNELLEQQKEDKATVEKKTKNVEKQIAELEAATK 180
Query: 178 AIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEE 223
+ + +L T + Q E A+ +L AQ + Q +K I+ K +AE+
Sbjct: 181 ELNDKTESLKTLKIQQEVAKNDLEAQRSEEQGKKDGFIKQKKEAEK 226
>gi|15674211|ref|NP_268386.1| hypothetical protein [Lactococcus
lactis subsp. lactis]
gi|25402176|pir||E86903 hypothetical protein usp45 [imported] -
Lactococcus lactis subsp. lactis (strain IL1403)
gi|12725296|gb|AAK06327.1|AE006451_8 HYPOTHETICAL PROTEIN
[Lactococcus lactis subsp. lactis]
Length = 456
Score = 99.0 bits (245), Expect = 1e-19
Identities = 78/217 (35%), Positives = 135/217 (61%), Gaps = 2/217 (0%)
Query: 1 MKKRILSAVLVSGVTLGTAA-VTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQ 59
MKK+I+SA+L+S V L AA ++ D +S IA D+ I++ +A AQ QV +++ +
Sbjct: 1 MKKKIISAILMSTVVLSAAAPLSGVYADTNSDIAKQDATISSAQSAKAQAQAQVDSLQSK 60
Query: 60 VGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNYI 118
V +L+ +Q+ +AQ A++E+ ++ L +I TL+ I R ++L+ Q RSAQ + TNY+
Sbjct: 61 VDSLQQKQASTKAQIAKIESEAKALNAQIATLNESIAERTKTLEAQARSAQVNSSATNYM 120
Query: 119 NTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQA 178
+ ++NSKS++D + +V AI V SAN++ML QQE ++ L K + N + Q+
Sbjct: 121 DAVVNSKSLTDVIQKVTAIATVSSANKQMLEQQEKEQKELSQKSETVKKNYNQFVSLSQS 180
Query: 179 IENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLI 215
+++ L +Q+A+L+ A L A + T Q++K SL+
Sbjct: 181 LDSQAQELTSQQAELKVATLNYQATIATAQDKKQSLL 217
>gi|97960|pir||JN0097 secreted 45K protein precursor - Lactococcus
lactis
Length = 461
Score = 99.0 bits (245), Expect = 2e-19
Identities = 77/217 (35%), Positives = 135/217 (61%), Gaps = 2/217 (0%)
Query: 1 MKKRILSAVLVSGVTLGTAA-VTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQ 59
MKK+I+SA+L+S V L AA ++ D +S IA D+ I++ +A AQ QV +++ +
Sbjct: 1 MKKKIISAILMSTVILSAAAPLSGVYADTNSDIAKQDATISSAQSAKAQAQAQVDSLQSK 60
Query: 60 VGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNYI 118
V +L+ +Q+ +AQ A++E+ ++ L +I TL+ I R ++L+ Q RSAQ + TNY+
Sbjct: 61 VDSLQQKQTSTKAQIAKIESEAKALNAQIATLNESIKERTKTLEAQARSAQVNSSATNYM 120
Query: 119 NTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQA 178
+ ++NSKS++D + +V AI V SAN++ML QQE ++ L K + N + Q+
Sbjct: 121 DAVVNSKSLTDVIQKVTAIATVSSANKQMLEQQEKEQKELSQKSETVKKNYNQFVSLSQS 180
Query: 179 IENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLI 215
+++ L +Q+A+L+ A L A + T Q++K +L+
Sbjct: 181 LDSQAQELTSQQAELKVATLNYQATIATAQDKKQALL 217
>gi|1351383|sp|P22865|US45_LACLC Secreted 45 kDa protein precursor
gi|149525|gb|AAA25230.1| secreted protein
Length = 461
Score = 96.7 bits (239), Expect = 7e-19
Identities = 76/217 (35%), Positives = 134/217 (61%), Gaps = 2/217 (0%)
Query: 1 MKKRILSAVLVSGVTLGTAA-VTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQ 59
MKK+I+SA+L+S V L AA ++ D +S IA D+ I++ +A AQ QV +++ +
Sbjct: 1 MKKKIISAILMSTVILSAAAPLSGVYADTNSDIAKQDATISSAQSAKAQAQAQVDSLQSK 60
Query: 60 VGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNYI 118
V +L+ +Q+ +AQ A++E+ + L +I TL+ I R ++L+ Q RSAQ + TNY+
Sbjct: 61 VDSLQQKQTSTKAQIAKIESELKALNAQIATLNESIKERTKTLEAQARSAQVNSSATNYM 120
Query: 119 NTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQA 178
+ ++NSKS++D + +V AI V SAN+++L QQE ++ L K + N + Q+
Sbjct: 121 DAVVNSKSLTDVIQKVTAIATVSSANKQILEQQEKEQKELSQKSETVKKNYNQFVSLSQS 180
Query: 179 IENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLI 215
+++ L +Q+A+L+ A L A + T Q++K +L+
Sbjct: 181 LDSQAQELTSQQAELKVATLNYQATIATAQDKKQALL 217
>gi|16801710|ref|NP_471978.1| peptidoglycan lytic protein P45
[Listeria innocua]
gi|25514739|pir||AC1763 peptidoglycan lytic protein P45 [imported]
- Listeria innocua (strain Clip11262)
gi|16415185|emb|CAC97875.1| peptidoglycan lytic protein P45
[Listeria innocua]
Length = 398
Score = 81.6 bits (200), Expect = 3e-14
Identities = 67/263 (25%), Positives = 132/263 (49%), Gaps = 2/263 (0%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNA-DDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQ 59
MKK A+ ++ V T A T N D ++ I D IN + ++ Q+ ++++
Sbjct: 1 MKKNTFIAISLAAVISLTPAFTTNVFADVNTDIQNQDKKINDIKSKKTGLQSDLSSLVAD 60
Query: 60 VGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTN-YI 118
+ + + L+ + Q +QL Q+I+ ++ +I R LK++ R+ QK + +N Y+
Sbjct: 61 LEKAQEKAKSLQGEFDQTGKELKQLNQDIKDINERIKERETVLKERARAMQKTSNSNAYL 120
Query: 119 NTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQA 178
IL+++++SD V RV A+ ++V +++ +L Q+ D+ AL+ KQ + A
Sbjct: 121 EVILDAENLSDLVGRVSAVNQLVDSDKSILEDQQKDEKALKTKQTAVKKKQEEQATAIHE 180
Query: 179 IENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEAK 238
E + + Q+A+ EA +L+A + +NEKA L+ + +A + A A A A
Sbjct: 181 FEAQQNKIEAQKAEKEAIVAQLAADQASAENEKAGLVSERDKAAKEATARATALREATDA 240
Query: 239 AQAEAKAQAESVAKAQAAAQVES 261
+ + + ++ + +VES
Sbjct: 241 NVGQQTTNTNASSNSKTSNKVES 263
>gi|20086385|dbj|BAB88830.1| hypothetical protein [Streptococcus
mutans]
Length = 125
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/59 (55%), Positives = 45/59 (75%), Gaps = 1/59 (1%)
Query: 338 SSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGG 396
++NTYP+GQCTWG K++A+W G++WGN W +SA A GY+VG TP VG++ W DGG
Sbjct: 68 NANTYPVGQCTWGVKAVATWAGDWWGNGGDWASSASAQGYTVGNTPAVGSIMCWT-DGG 125
>gi|27467455|ref|NP_764092.1| conserved hypothetical protein
[Staphylococcus epidermidis ATCC 12228]
gi|27314998|gb|AAO04134.1|AE016745_233 conserved hypothetical
protein [Staphylococcus epidermidis ATCC 12228]
Length = 266
Score = 73.6 bits (179), Expect = 6e-12
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 337 DSSNTYPMGQCTWGA----KSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAV---A 389
+S N Y GQCT+ A + +G+ WGNA+ W SA AG++V TP VGAV
Sbjct: 154 NSGNLYTTGQCTYYAFDRRAELGKPIGSLWGNASNWAYSANQAGFNVDHTPEVGAVFQSG 213
Query: 390 VWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVY 442
G YGHV VV S+ +N S+ V E N+ G +++ +YR NP++ ++
Sbjct: 214 PGQNGAGAYGHVGVVESINSNGSVTVSEMNWNGGVNVKSYRTISNPNSYNYIH 266
>gi|20086383|dbj|BAB88829.1| hypothetical protein [Streptococcus
ratti]
Length = 125
Score = 73.2 bits (178), Expect = 8e-12
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 322 SSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSVGT 381
+ P A S ++ D NTYP+GQCTWG K +ASW G++WGN W ASA A GYSVG
Sbjct: 53 TQAPAADSTEAAQAAD-GNTYPVGQCTWGVKEVASWAGDWWGNGGDWAASAAAQGYSVGN 111
Query: 382 TPRVGAVAVWPYDGG 396
TP VG++ W DGG
Sbjct: 112 TPAVGSIMCWT-DGG 125
>gi|23099946|ref|NP_693412.1| hypothetical protein [Oceanobacillus
iheyensis HTE831]
gi|22778177|dbj|BAC14447.1| hypothetical conserved protein
[Oceanobacillus iheyensis HTE831]
Length = 460
Score = 72.4 bits (176), Expect = 1e-11
Identities = 55/224 (24%), Positives = 108/224 (47%), Gaps = 3/224 (1%)
Query: 34 ATDSVINTLSGQQAAAQNQVTAIKGQVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSN 93
+ ++ IN++ + Q Q+ + ++ + + L + +L+ ++L +EI+ L
Sbjct: 73 SVETEINSIDSELEDTQKQIETKQTEIDNTNDEINSLTEKVEELKERMKELEEEIKLLKE 132
Query: 94 KIVARNESLKKQVRSAQK-GNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQE 152
+I R+E LK ++ S Q+ G Y+ I + S D ++R A+ ++ +++++ +QE
Sbjct: 133 RIEKRDELLKNRLLSIQQNGGDIKYLEVIFGASSFGDFISRSTAVNTIMDQDKEIMEEQE 192
Query: 153 ADKAALEAKQIENQNAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKA 212
DK LE + E + V K +E K +L Q +L A + +L+ Q+ + A
Sbjct: 193 RDKQTLEENKKEVVASKEEVEEKKLTVEEKKKSLEGQHDELLALKDKLNDQVAEKETLMA 252
Query: 213 SLIQAKAQAEEAARKAAEAQAAAEAKAQAEAKAQAESVAKAQAA 256
L+ + EE A E Q +A AK QA +A+ + A
Sbjct: 253 ELVDEHEELEEIKLSAEEEQQLIS--DEAAAKEQAIKLAQEKQA 294
>gi|16804543|ref|NP_466028.1| peptidoglycan lytic protein P45
[Listeria monocytogenes EGD-e]
gi|25517670|pir||AI1387 peptidoglycan lytic protein P45 [imported]
- Listeria monocytogenes (strain EGD-e)
gi|6624719|emb|CAB63842.1| P45 [Listeria monocytogenes]
gi|16411993|emb|CAD00583.1| peptidoglycan lytic protein P45
[Listeria monocytogenes]
Length = 401
Score = 71.6 bits (174), Expect = 3e-11
Identities = 62/244 (25%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNA-DDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQ 59
MKK A+ ++ V T A T N D ++ I D IN + ++ Q+ ++ +
Sbjct: 1 MKKNTFIAISLAAVISLTPAFTTNVFADVNTDIQNQDKKINDIKSKKTDLQSDLSGLVAD 60
Query: 60 VGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTN-YI 118
+ + + L+ + + ++L ++I++++ +I R LK++ R+ QK + +N Y+
Sbjct: 61 LEKAQEKAKSLQGEFDKTGKELKKLNEDIKSINERIKERETVLKERARAMQKTSNSNAYL 120
Query: 119 NTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQA 178
IL+++++SD V RV A+ ++V +++ +L Q+ D+ AL+ KQ + A
Sbjct: 121 EVILDAENLSDLVGRVSAVNQLVDSDKSILEDQQNDEKALKTKQTAVKKKQEDQATAIHE 180
Query: 179 IENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLI--QAKAQAEEAARKAAEAQAAAE 236
E + + Q+A+ EA +L++ + +N KA L+ + KA E AR A +A +
Sbjct: 181 YEAQQNKIEAQKAEKEAIVAQLASDQASAENAKAGLVSERDKAAKEATARATALREATSS 240
Query: 237 AKAQ 240
Q
Sbjct: 241 NVGQ 244
>gi|15923745|ref|NP_371279.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus Mu50]
gi|15926432|ref|NP_373965.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus N315]
gi|25506729|pir||D89848 conserved hypothetical protein SA0710
[imported] - Staphylococcus aureus (strain N315)
gi|13700646|dbj|BAB41943.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus N315]
gi|14246524|dbj|BAB56917.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus Mu50]
Length = 279
Score = 71.6 bits (174), Expect = 3e-11
Identities = 64/191 (33%), Positives = 89/191 (46%), Gaps = 26/191 (13%)
Query: 265 PTETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSVVTKAVEAPKAVVSST 324
P + + P+ ++K + A S A+ +P V Q S +APK V+ T
Sbjct: 88 PGDVISLVPQNKVKQTK--AVKSPVRKASQAKKVVKQP-VQQASKKVVVKQAPKQAVAKT 144
Query: 325 ------PRAVSK-----PVVRSYDSS-----NTYPMGQCTWGA----KSMASWVGNYWGN 364
P V K PV +Y+ S N Y G CT+ A + +G+ WGN
Sbjct: 145 VNVAYKPAQVQKSVPTVPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGN 204
Query: 365 ANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNM 424
AN W +A+ AG+ V TP VG A++ G YGHV VV SV N +I V E NYAG
Sbjct: 205 ANNWNYAAKVAGFKVDKTPEVG--AIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAG-F 261
Query: 425 SIGNYRGSFNP 435
++ + R NP
Sbjct: 262 NVKSSRTILNP 272
>gi|20086381|dbj|BAB88828.1| hypothetical protein [Streptococcus
criceti]
Length = 132
Score = 70.9 bits (172), Expect = 4e-11
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 279 PSNLTATSSATTVATTTATATNEPKVTQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDS 338
P L A + T +T T E + + AP A + + P + + +
Sbjct: 18 PYQLAANNGMTISSTILPGQTIEVDGSTQAAAPAQEAAPVAEAPADQGQAAAPALDT--A 75
Query: 339 SNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGG 396
NTYP GQCTWG K + W G++WGN W ASA + GY+VG+TP+VG++ W DGG
Sbjct: 76 VNTYPTGQCTWGVKQVTGWAGDWWGNGGDWAASAASDGYTVGSTPQVGSIICWS-DGG 132
>gi|21282446|ref|NP_645534.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus MW2]
gi|21203883|dbj|BAB94582.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus MW2]
Length = 279
Score = 70.9 bits (172), Expect = 5e-11
Identities = 63/191 (32%), Positives = 89/191 (45%), Gaps = 26/191 (13%)
Query: 265 PTETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSVVTKAVEAPKAVVSST 324
P + + P+ ++K + A + A+ +P V Q S +APK V+ T
Sbjct: 88 PGDVISLVPQNKVKQTK--AVKTPVRKASQAKKVVKQP-VQQASKKVVVKQAPKQAVAKT 144
Query: 325 ------PRAVSK-----PVVRSYDSS-----NTYPMGQCTWGA----KSMASWVGNYWGN 364
P V K PV +Y+ S N Y G CT+ A + +G+ WGN
Sbjct: 145 VNVAYKPAQVQKSVPTVPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGN 204
Query: 365 ANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNM 424
AN W +A+ AG+ V TP VG A++ G YGHV VV SV N +I V E NYAG
Sbjct: 205 ANNWNYAAKVAGFKVDKTPEVG--AIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAG-F 261
Query: 425 SIGNYRGSFNP 435
++ + R NP
Sbjct: 262 NVKSSRTILNP 272
>gi|20086387|dbj|BAB88831.1| hypothetical protein [Streptococcus
sobrinus]
Length = 128
Score = 70.5 bits (171), Expect = 6e-11
Identities = 30/58 (51%), Positives = 41/58 (69%), Gaps = 1/58 (1%)
Query: 339 SNTYPMGQCTWGAKSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGG 396
+NTYP+GQCTWG K + W G++WGN W SA +GY+VG +P+VG++ W DGG
Sbjct: 72 ANTYPVGQCTWGVKQVTGWAGDWWGNGGDWAGSAANSGYTVGNSPQVGSIICWT-DGG 128
>gi|12957015|emb|CAC29185.1| hypothetical protein [Enterococcus
faecalis]
Length = 368
Score = 69.7 bits (169), Expect = 9e-11
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 335 SYDSSNTYPMGQCTWGAKSMASWVG----NYWGNANQWGASARAAGYSVGTTPRVGAVAV 390
+Y++S +YP GQCTW A + + +G ++ GN +WG +A GY V P+VG
Sbjct: 251 NYNTSGSYPFGQCTWYAFNRMAQIGKPVDDFMGNGGEWGYKGKALGYKVTNKPKVGTAIS 310
Query: 391 WPYDGGG----YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYIY 445
+P G YGHVA V V + ++ V E N S G+ S+S S Y Y
Sbjct: 311 FPPGSFGSDPVYGHVAFVEVVNADGTLLVSECNVVNPGS-----GTIKLSSSASFYCKY 364
>gi|27469026|ref|NP_765663.1| secretory antigen precursor SsaA
[Staphylococcus epidermidis ATCC 12228]
gi|27316575|gb|AAO05750.1|AE016751_45 secretory antigen precursor
SsaA [Staphylococcus epidermidis ATCC 12228]
Length = 143
Score = 68.6 bits (166), Expect = 2e-10
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 335 SYDSSNTYPMGQCTWGA----KSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAV 390
S+ + N Y QCTW A + V N WGNA W ++AR +GY+ G PR AV
Sbjct: 33 SHAAHNYYGKKQCTWWAFKRRAQLGKPVSNRWGNAKNWYSNARRSGYATGHKPR--KYAV 90
Query: 391 WPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYIY 445
G YGHVAVV V N I++ E NY N+ +G + S++ + YIY
Sbjct: 91 MQSTRGYYGHVAVVEKVYKNGKIKISEYNY--NVPLGYGTRIISKSSARNYNYIY 143
>gi|15925534|ref|NP_373068.1| hypothetical protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|15928123|ref|NP_375656.1| hypothetical protein, similar to
secretory antigen precursor SsaA [Staphylococcus aureus
subsp. aureus N315]
gi|21284194|ref|NP_647282.1| ORFID:MW2465~hypothetical protein,
similar to secretory antigen precursor SsaA
[Staphylococcus aureus subsp. aureus MW2]
gi|25506078|pir||A99959 hypothetical protein SA2332 [imported] -
Staphylococcus aureus (strain N315)
gi|13702494|dbj|BAB43635.1| SA2332 [Staphylococcus aureus subsp.
aureus N315]
gi|14248318|dbj|BAB58706.1| hypothetical protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|21205637|dbj|BAB96330.1| MW2465 [Staphylococcus aureus subsp.
aureus MW2]
Length = 143
Score = 66.2 bits (160), Expect = 1e-09
Identities = 40/91 (43%), Positives = 49/91 (52%), Gaps = 6/91 (6%)
Query: 334 RSYDSSNTYPMGQCTWGAKSMASWVG----NYWGNANQWGASARAAGYSVGTTPRVGAVA 389
+S+ + N Y QCTW A + VG N WGNA W +AR + Y+ G TPR A
Sbjct: 32 QSHAAVNYYSKNQCTWWAFKRRAQVGKPVSNRWGNAKNWYYNARKSKYATGRTPR--KFA 89
Query: 390 VWPYDGGGYGHVAVVTSVANNSSIQVMESNY 420
V G YGHVAVV V N SI+V E N+
Sbjct: 90 VMQSTAGYYGHVAVVEQVYKNGSIKVSEYNF 120
>gi|27468794|ref|NP_765431.1| secretory antigen precursor SsaA
[Staphylococcus epidermidis ATCC 12228]
gi|27316342|gb|AAO05517.1|AE016750_122 secretory antigen precursor
SsaA [Staphylococcus epidermidis ATCC 12228]
Length = 157
Score = 66.2 bits (160), Expect = 1e-09
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 337 DSSNTYPMGQCTWGA-KSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDG 395
+S N Y GQCTW +G+ WGNAN W +A+AAG++V TP GA+
Sbjct: 49 NSGNLYTSGQCTWYVYDKTGGKIGSTWGNANSWATAAQAAGFTVNNTPEEGAIM--QSSE 106
Query: 396 GGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYIYPN 447
G +GHVA V SV N+ SI V E NY G + R + + S + S YI+ N
Sbjct: 107 GAFGHVAFVESVNNDGSITVSEMNYDGGPFAISTR-TISASEASSYNYIHLN 157
>gi|22324223|emb|CAD44387.1| hypothetical protein [Enterococcus
faecalis]
Length = 369
Score = 65.9 bits (159), Expect = 1e-09
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 335 SYDSSNTYPMGQCTWGAKSMASWVG----NYWGNANQWGASARAAGYSVGTTPRVGAVAV 390
+Y++S +YP GQCTW A + + +G ++ GN +WG +A GY V P+VG
Sbjct: 251 NYNTSGSYPFGQCTWYAFNRMAQIGKPVDDFMGNGGEWGYKGKALGYKVTNKPKVGTAIS 310
Query: 391 WPYDGGG----YGHVAVVTSVANNSSIQVMESN 419
+P G YGHVA V V + ++ V E N
Sbjct: 311 FPPGSFGSDPVYGHVAFVEVVNADGTLLVSECN 343
>gi|11559696|gb|AAG38044.1|AF295925_9 Orf28 [Streptococcus
pneumoniae]
Length = 371
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 22/105 (20%)
Query: 342 YPMGQCTWGAKSMASWVG--------------NYWGNANQWGASARAAGYSVGTTPRVGA 387
Y GQCTWG + + +G N GN W A++ + G G+TPR GA
Sbjct: 245 YAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATSSSLGGETGSTPRAGA 304
Query: 388 VAVWPYDGG------GYGHVAVVTSVANNSSIQVMESNYAGNMSI 426
+ + GG YGHVA V V ++ S V E+NY GN++I
Sbjct: 305 IV--SFVGGTHGTPASYGHVAFVEKVYDDGSFLVSETNYGGNLTI 347
>gi|16080533|ref|NP_391360.1| alternate gene name: yzkA~similar to
cell wall-binding protein [Bacillus subtilis]
gi|7531281|sp|P40767|YVCE_BACSU Hypothetical protein yvcE (PSPA2)
gi|7474490|pir||F70031 cell wall-binding protein homolog yvcE -
Bacillus subtilis
gi|1945646|emb|CAB08053.1| hypothetical protein [Bacillus subtilis]
gi|2635993|emb|CAB15485.1| yvcE [Bacillus subtilis subsp. subtilis
str. 168]
Length = 473
Score = 64.3 bits (155), Expect = 4e-09
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 14/247 (5%)
Query: 30 SKIAATDSVINTLSGQQAAAQNQVTAIKGQVGALESQQSELEAQNAQLEAVSQQLGQEIQ 89
S I A + + L Q+ + ++ I + ++ + + +N + + ++L +EI+
Sbjct: 49 SSIEAKEKELTELQENQSKIEKELKDINDKALDTSNKIEDKKEENDKTKEEIKKLKKEIK 108
Query: 90 TLSNKIVARNESLKKQVRSAQK-GNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKML 148
+I RNE LKK+VRS Q+ G YI+ +L S S D ++R A+ +V A++ ++
Sbjct: 109 ETEARIEKRNEILKKRVRSLQESGGSQGYIDVLLGSTSFGDFISRATAVSSIVDADKDLI 168
Query: 149 AQQEADKAALEAKQIENQNAINTVAANKQAIENNKAALATQRA-------QLEAAQLELS 201
QQE DKA LE + + + + V A +E + L Q + +A+Q + +
Sbjct: 169 KQQEQDKAKLEDSEADLNDKLKEVQAALAKLETMQKDLDKQLNEKDKLFDEAKASQKKTA 228
Query: 202 AQLTTVQNEKASLIQAKAQAE-EAARKAAEAQAAAEAKAQAEAKAQAESVAKAQAAAQVE 260
++ +++E + L KA E E AR E +AAA A K Q E+ + +
Sbjct: 229 KAISELKSEASELANQKANTEAEQARIKKEQEAAA-----ALIKKQEEAQKASDETQTDD 283
Query: 261 SATAPTE 267
S TA TE
Sbjct: 284 SQTATTE 290
>gi|23466023|ref|NP_696626.1| possible TraG-related protein
[Bifidobacterium longum NCC2705]
gi|23326743|gb|AAN25262.1|AE014777_5 possible TraG-related protein
[Bifidobacterium longum NCC2705]
Length = 486
Score = 63.9 bits (154), Expect = 5e-09
Identities = 43/116 (37%), Positives = 58/116 (49%), Gaps = 13/116 (11%)
Query: 342 YPMGQCTWGA----KSMASWVGNYWGNANQWGASARAAGY-SVGTTPRVGAVAVWPYDGG 396
YP GQCTW A + VG+YWGN W ASA AAG+ + T P G++ +P
Sbjct: 209 YPDGQCTWWACMRGHKIGLDVGSYWGNGGDWAASATAAGWKTTRTDPVAGSIVSYPPGVA 268
Query: 397 G----YGHVAVVTSVANNS-SIQVMESNYAGNMSIGNYRGSFNPSASGSVYYIYPN 447
YGHVAVV +V + ++ + E N G + I N+R + YI PN
Sbjct: 269 DADTLYGHVAVVEAVDRTAGTVTISEMNGRGGLGIVNHR---THRINVGAVYILPN 321
>gi|32470414|ref|NP_863630.1| putative membrane protein TraG
[Staphylococcus aureus]
gi|33416247|ref|NP_877993.1| TraG [Staphylococcus aureus]
gi|3676441|gb|AAC61959.1| putative membrane protein TraG
[Staphylococcus aureus]
gi|33390931|gb|AAQ17137.1| TraG [Staphylococcus aureus]
gi|739962|prf||2004267H traG protein
Length = 358
Score = 62.8 bits (151), Expect = 1e-08
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 334 RSYDSSNTYPMGQCTWGAKSMASWVGN----YWGNANQWGASARAAGYSVGTTPRVGA-V 388
+S + +YP GQCTW +G WGN WG +A+A G+ VG+ P+ GA
Sbjct: 239 KSKYNGQSYPWGQCTWYVHQRRKEIGKPVPLTWGNGGDWGDNAKAQGWEVGSKPKAGAGA 298
Query: 389 AVWPYDGGG---YGHVAVVTSVANNSSIQVMESNYAG 422
+V P + G YGH+ V V + I V E+N G
Sbjct: 299 SVKPGNFGAPPPYGHIMFVEKVKKDGGIVVSEANVKG 335
>gi|27468407|ref|NP_765044.1| secretory antigen SsaA-like protein
[Staphylococcus epidermidis ATCC 12228]
gi|27315954|gb|AAO05088.1|AE016749_34 secretory antigen SsaA-like
protein [Staphylococcus epidermidis ATCC 12228]
Length = 356
Score = 62.8 bits (151), Expect = 1e-08
Identities = 38/96 (39%), Positives = 46/96 (47%), Gaps = 22/96 (22%)
Query: 340 NTYPMGQCTWGAKSMASWVGN-----------YWGNANQWGASARAAGYSVGTTPRVGAV 388
N Y QCTW WV N ++GN WG++A + GYSVG P GA
Sbjct: 243 NAYAFRQCTW-------WVYNRRLELGLPCDPFFGNGGDWGSTAPSKGYSVGKKPVQGAA 295
Query: 389 AVW-PYDG--GGYGHVAVVTSVAN-NSSIQVMESNY 420
W PY G GGYGHVA V V + I + E N+
Sbjct: 296 VSWPPYVGGAGGYGHVAFVEKVLDGGKKIHISEHNW 331
>gi|27469237|ref|NP_765874.1| autolysin (N-acetylmuramoyl-L-alanine
amidase [Staphylococcus epidermidis ATCC 12228]
gi|27316786|gb|AAO05961.1|AE016751_256 autolysin
(N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis ATCC 12228]
Length = 324
Score = 62.0 bits (149), Expect = 2e-08
Identities = 38/98 (38%), Positives = 55/98 (55%), Gaps = 9/98 (9%)
Query: 335 SYDSSNTYPMGQCTWGAKSMASWVG----NYWGNANQWGASARAAGYSVGTTPRVGAVAV 390
+++ N Y GQCTW + + +G YW NAN W ++ A GY++ P VG++A
Sbjct: 213 TFNHQNLYTWGQCTWHVFNRRAEIGKGISTYWWNANNWDNASAADGYTIDYRPTVGSIA- 271
Query: 391 WPYDGGGYGHVAVVTSVANNSSIQVMESNYA---GNMS 425
D G YGHVA V V ++ SI V E N++ GNM+
Sbjct: 272 -QTDAGYYGHVAFVERVNSDGSILVSEMNWSAAPGNMT 308
>gi|1361348|pir||H36891 transfer complex protein trsG -
Staphylococcus aureus
gi|310614|gb|AAA71958.1| putative [Staphylococcus aureus]
Length = 358
Score = 61.6 bits (148), Expect = 2e-08
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 334 RSYDSSNTYPMGQCTWGAKSMASWVGN----YWGNANQWGASARAAGYSVGTTPRVG-AV 388
+S + +YP GQCTW +G WGN WG +A+A G+ VG+ P+ G
Sbjct: 239 KSKYNGQSYPWGQCTWYVHQRRKEIGKPVPLTWGNGGDWGDNAKAQGWEVGSKPKAGRGA 298
Query: 389 AVWPYDGGG---YGHVAVVTSVANNSSIQVMESNYAG 422
+V P + G YGH+ V V + I V E+N G
Sbjct: 299 SVKPGNFGAPPPYGHIMFVEKVKKDGGIVVSEANVKG 335
>gi|27467351|ref|NP_763988.1| secretory antigen SsaA-like protein
[Staphylococcus epidermidis ATCC 12228]
gi|27314894|gb|AAO04030.1|AE016745_129 secretory antigen SsaA-like
protein [Staphylococcus epidermidis ATCC 12228]
Length = 266
Score = 60.8 bits (146), Expect = 5e-08
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 335 SYDSSNTYPMGQCTWGAKSMASWVG----NYWGNANQWGASARAAGYSVGTTPRVGAVAV 390
S++ N Y GQCTW S G YW +A W ++A GY V TP VGA+
Sbjct: 155 SFNHQNLYTEGQCTWYVFDKRSQAGKPISTYWSDAKYWASNAANDGYQVDNTPSVGAIM- 213
Query: 391 WPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYR 430
G YGHVA V + + SI + E NYA NYR
Sbjct: 214 -QSTPGPYGHVAYVERINGDGSILISEMNYANGPYNMNYR 252
>gi|29376366|ref|NP_815520.1| N-acetylmuramoyl-L-alanine amidase,
family 4 [Enterococcus faecalis V583]
gi|29343829|gb|AAO81590.1| N-acetylmuramoyl-L-alanine amidase,
family 4 [Enterococcus faecalis V583]
Length = 652
Score = 60.5 bits (145), Expect = 6e-08
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 335 SYDSSNTYPMGQCTWGA----KSMASWVGNYWGNANQWGASARAAGYSVGTTPRVG-AVA 389
+Y+ S +YP+GQCTW K + + V + GN + WG RA GY V + P+ G A++
Sbjct: 534 NYNRSGSYPVGQCTWYVYNRFKQLGTSVDEFMGNGSDWGRKGRALGYQVSSLPKAGRAIS 593
Query: 390 VWPYDGGG---YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYR 430
P G YGHVA V +V ++ I + ESN + +I +YR
Sbjct: 594 FQPGVAGADNQYGHVAFVEAVTSDGII-ISESNVINDQTI-SYR 635
>gi|30023229|ref|NP_834860.1| N-acetylmuramoyl-L-alanine amidase
[Bacillus cereus ATCC 14579]
gi|29898789|gb|AAP12061.1| N-acetylmuramoyl-L-alanine amidase
[Bacillus cereus ATCC 14579]
Length = 435
Score = 59.7 bits (143), Expect = 1e-07
Identities = 57/246 (23%), Positives = 116/246 (46%), Gaps = 21/246 (8%)
Query: 2 KKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQVG 61
K ++ S LV+G+ V A+D KI+ S INT + Q + ++ Q+
Sbjct: 3 KLKMASCALVAGLMFSGLTPNVFAED---KISDVKSQINTQNDTLHKQQQERDELQKQMN 59
Query: 62 ALE--------------SQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVR 107
L ++ E + A E + ++ ++I L KI R E L+K++
Sbjct: 60 DLNKTIQGLDKSVQENAAKLDETTKKVADTEQLIEKKNKDIAELQTKIAKREELLRKRLV 119
Query: 108 SAQKGNLTNYINTIL-NSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQ 166
+ Q+ TN + +L NSK+V+D V+R+ ++ +++ ++E ++ Q+ D+A+++ +
Sbjct: 120 ALQEQPNTNVVTEVLVNSKNVADLVDRLTSVSKILESDEDIMKTQQEDQASVKKDVATVK 179
Query: 167 NAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAAR 226
+ + IE K L ++ + A +LS ++ TV S+ + Q +E +
Sbjct: 180 EKQKELKEAQAQIETAKKELDAEKEKKATAVNDLSGKMDTVV---TSMTSTEGQLKELEK 236
Query: 227 KAAEAQ 232
+A + Q
Sbjct: 237 QALQLQ 242
>gi|15893601|ref|NP_346950.1| Cell wall-associated hydrolase
[Clostridium acetobutylicum]
gi|25500446|pir||G96937 cell wall-associated hydrolase [imported] -
Clostridium acetobutylicum
gi|15023152|gb|AAK78290.1|AE007545_7 Cell wall-associated hydrolase
[Clostridium acetobutylicum]
Length = 371
Score = 59.3 bits (142), Expect = 1e-07
Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 33/278 (11%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQV 60
M ++ L+A++ G+T+ + V A + + +N++ A+ Q+
Sbjct: 1 MHRKFLTALIALGITVSCSGNIVFASPLQDQYNQSQQQYQNALKSVQDIENKIEALDNQI 60
Query: 61 GALESQQSELEA---QNAQLEAVSQ-QLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTN 116
G L + ++ + ++ Q A++Q ++ Q Q ++N+ E L+ + G
Sbjct: 61 GELNNSINDTDKRINESKQNMAITQGKIDQAKQNITNQQEIYGERLRAMYVN---GTTAQ 117
Query: 117 YINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANK 176
YI IL S+S SD ++R+ A+++V++ ++ + IN K
Sbjct: 118 YIGVILESQSFSDLISRLDAVKDVINYDKGI---------------------INNFKTQK 156
Query: 177 QAIENNKAALATQRAQLEAAQLELSAQLTTVQNEK---ASLIQAKAQAEEAARKAAEAQA 233
Q +EN + LA Q ++L A Q E +L + N+K SLI A +E A+ E Q
Sbjct: 157 QEVENQQKILADQNSKLVALQNENHKKLDDLNNKKNTQNSLIVAA--KDEEAKHTNEMQQ 214
Query: 234 AAEAKAQAEAKAQAESVAKAQAAAQVESATAPTETVQT 271
+A + K +A +V+ V T+ T+Q+
Sbjct: 215 IQKAMDDEKKKIEALNVSTNIQLKPVSKTTSQNTTIQS 252
>gi|27467788|ref|NP_764425.1| secretory antigen SsaA [Staphylococcus
epidermidis ATCC 12228]
gi|27315332|gb|AAO04467.1|AE016746_257 secretory antigen SsaA
[Staphylococcus epidermidis ATCC 12228]
Length = 156
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 340 NTYPMGQCTW----GAKSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDG 395
NTY GQCT+ K+ + + N W +A W A GY V P+ G++
Sbjct: 45 NTYKKGQCTYYVFERVKNDGNKINNTWSDAKHWDKKAIDDGYIVDRNPKKGSIL--QSSK 102
Query: 396 GGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYIYP 446
G YGHVA + ++ + S+QV E NY I + + + + YYI+P
Sbjct: 103 GKYGHVAYIETINEDGSMQVSEMNYTQPYEIT--KRTIHTYDIKNYYYIHP 151
>gi|11968242|ref|NP_072029.1| traG-related protein [Enterococcus
faecalis]
gi|11767462|gb|AAG40447.1| traG-related protein [Enterococcus
faecalis]
Length = 423
Score = 58.5 bits (140), Expect = 2e-07
Identities = 57/170 (33%), Positives = 72/170 (41%), Gaps = 17/170 (10%)
Query: 267 ETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSV---VTKAVEAPKAVVSS 323
E +Q K S L + T + N V VT AP V S
Sbjct: 224 EAIQKYGNAPFKKSELVPNIPGKSPITNEKSGKNSDCVVTSDTSDQVTGQNTAPSLEVPS 283
Query: 324 TPRA-VSKPVVRSYD-SSNTYPMGQCTWGAKSMASWVGN--YW-----GNANQWGASARA 374
+ ++ P + S D + N YP GQCTW A + + +G W GN W SARA
Sbjct: 284 AYKGKLTLPPIDSNDYAGNNYPFGQCTWYAYNRMAQIGKPIEWFSGDGGNGAGWANSARA 343
Query: 375 AGYS-VGTTPRVGAVAVWPYDGGG----YGHVAVVTSVANNSSIQVMESN 419
GY+ V P VG A GG YGHVAVV V ++ SI V E+N
Sbjct: 344 KGYTVVKGKPSVGWAASMQGGIGGSAPPYGHVAVVEYVNSDGSILVSEAN 393
>gi|18104297|gb|AAL59482.1|AF343839_1 conjugation protein
[Enterococcus faecalis]
Length = 423
Score = 58.5 bits (140), Expect = 3e-07
Identities = 57/170 (33%), Positives = 72/170 (41%), Gaps = 17/170 (10%)
Query: 267 ETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSV---VTKAVEAPKAVVSS 323
E +Q K S L + T + N V VT AP V S
Sbjct: 224 EAIQKYGNAPFKKSELVPNIPGKSPITNEKSGKNSDCVVTSDTSDQVTGQNTAPSLEVPS 283
Query: 324 TPRA-VSKPVVRSYD-SSNTYPMGQCTWGAKSMASWVGN--YW-----GNANQWGASARA 374
+ ++ P + S D + N YP GQCTW A + + +G W GN W SARA
Sbjct: 284 AYKGKLTLPPIDSNDYAGNNYPFGQCTWYAYNRMAQIGKPIEWFSGDGGNGAGWANSARA 343
Query: 375 AGYS-VGTTPRVGAVAVWPYDGGG----YGHVAVVTSVANNSSIQVMESN 419
GY+ V P VG A GG YGHVAVV V ++ SI V E+N
Sbjct: 344 KGYTVVKGKPSVGWAASMQGGIGGSAPPYGHVAVVEYVNSDGSILVSEAN 393
>gi|29377838|ref|NP_816966.1| conserved hypothetical protein
[Enterococcus faecalis V583]
gi|29345290|gb|AAO83037.1| conserved hypothetical protein
[Enterococcus faecalis V583]
Length = 423
Score = 58.2 bits (139), Expect = 3e-07
Identities = 57/170 (33%), Positives = 71/170 (41%), Gaps = 17/170 (10%)
Query: 267 ETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSV---VTKAVEAPKAVVSS 323
E +Q K S L + T N V VT AP V S
Sbjct: 224 EAIQKYGNAPFKKSELVLNIPGKSPITNEKYGKNSDCVVTSDTSDQVTGQNTAPSLEVPS 283
Query: 324 TPRA-VSKPVVRSYD-SSNTYPMGQCTWGAKSMASWVGN--YW-----GNANQWGASARA 374
+ ++ P + S D + N YP GQCTW A + + +G W GN W SARA
Sbjct: 284 AYKGKLTLPPIDSNDYAGNNYPFGQCTWYAYNRMAQIGKPIEWFSGDGGNGAGWANSARA 343
Query: 375 AGYS-VGTTPRVGAVAVWPYDGGG----YGHVAVVTSVANNSSIQVMESN 419
GY+ V P VG A GG YGHVAVV V ++ SI V E+N
Sbjct: 344 KGYTVVKVKPSVGWAASMQGGIGGSAPPYGHVAVVEYVNSDGSILVSEAN 393
>gi|21397656|ref|NP_653641.1| NLPC_P60, NLP/P60 family [Bacillus
anthracis A2012]
gi|30265218|ref|NP_847595.1| endopeptidase lytE, putative [Bacillus
anthracis str. Ames]
gi|30259895|gb|AAP29081.1| endopeptidase lytE, putative [Bacillus
anthracis str. Ames]
Length = 436
Score = 58.2 bits (139), Expect = 3e-07
Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 23/247 (9%)
Query: 2 KKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQVG 61
K ++ S LV+G+ A+D KI+ S INT + Q + ++ Q+
Sbjct: 3 KLKMASCALVAGLMFSGLTPNAFAED---KISDVKSQINTQNDTLHKQQQERDELQKQMN 59
Query: 62 ALE--------------SQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVR 107
L ++ E + A E + ++ ++I L KI R E L+K++
Sbjct: 60 DLNKTIQGLDKSVQENAAKLDETTKKVADTEQLIEKKNKDIAELQTKIAKREELLRKRLV 119
Query: 108 SAQKGNLTNYINTIL-NSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQ 166
+ Q+ TN + +L NSK+V+D V+R+ ++ +++ ++E ++ Q+ D+A ++ K +E
Sbjct: 120 ALQEQPNTNVVTEVLVNSKNVADLVDRLTSVSKILESDEDIMKTQQEDQANVK-KDVETV 178
Query: 167 NAINTVAANKQA-IENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAA 225
QA IE K L ++A+ A +LS ++ TV S+ ++Q ++
Sbjct: 179 KTKQKELKEAQAQIETAKKELDAEKAKKATAVNDLSGKMDTVV---TSMTSTESQLKDLE 235
Query: 226 RKAAEAQ 232
++A + Q
Sbjct: 236 KQALQLQ 242
>gi|29375119|ref|NP_814272.1| conserved domain protein [Enterococcus
faecalis V583]
gi|29342578|gb|AAO80343.1| conserved domain protein [Enterococcus
faecalis V583]
Length = 423
Score = 58.2 bits (139), Expect = 3e-07
Identities = 57/170 (33%), Positives = 71/170 (41%), Gaps = 17/170 (10%)
Query: 267 ETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSV---VTKAVEAPKAVVSS 323
E +Q K S L + T N V VT AP V S
Sbjct: 224 EAIQKYGNAPFKKSELVLNIPGKSPITNEKYGKNSDCVVTSDTSDQVTGQNTAPSLEVPS 283
Query: 324 TPRA-VSKPVVRSYD-SSNTYPMGQCTWGAKSMASWVGN--YW-----GNANQWGASARA 374
+ ++ P + S D + N YP GQCTW A + + +G W GN W SARA
Sbjct: 284 AYKGKLTLPPIDSNDYAGNNYPFGQCTWYAYNRMAQIGKPIEWFSGDGGNGAGWANSARA 343
Query: 375 AGYS-VGTTPRVGAVAVWPYDGGG----YGHVAVVTSVANNSSIQVMESN 419
GY+ V P VG A GG YGHVAVV V ++ SI V E+N
Sbjct: 344 KGYTVVKVKPSVGWAASMQGGIGGSAPPYGHVAVVEYVNSDGSILVSEAN 393
>gi|15616162|ref|NP_244467.1| cell wall-binding protein [Bacillus
halodurans]
gi|25486782|pir||H84099 cell wall-binding protein BH3600 [imported]
- Bacillus halodurans (strain C-125)
gi|10176224|dbj|BAB07319.1| cell wall-binding protein [Bacillus
halodurans]
Length = 461
Score = 57.8 bits (138), Expect = 4e-07
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 61 GALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSA-QKGNLTNYIN 119
G ++ ++ E+E A++E +L ++I+ L +I R+E LK + R+ Q G +Y+
Sbjct: 85 GKIQEKREEIEEVQAEIE----ELKEQIEILEERIAERDELLKDRARAMYQNGGSIDYLE 140
Query: 120 TILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAI 179
IL +KS D ++RV A+ + + +L D LE + + + + T+ + +
Sbjct: 141 VILGAKSFGDFLDRVSALSVIAEQDRGILEAHIEDHRLLEEAKAQVEEKLETLEGHLVEL 200
Query: 180 ENNKAALATQR-------AQLEAAQLELSAQLTTVQNEKASLIQAKAQAEE 223
EN A L Q+ +L + + EL L +++N++ L Q + +E
Sbjct: 201 ENLMAQLEEQQKEKEKVMGELASREDELHGDLESLENDEELLRQQEKALQE 251
>gi|25011401|ref|NP_735796.1| Unknown [Streptococcus agalactiae
NEM316]
gi|24412939|emb|CAD47018.1| Unknown [Streptococcus agalactiae
NEM316]
Length = 931
Score = 56.2 bits (134), Expect = 1e-06
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 342 YPMGQCTWGAKSMASWVG--------------NYWGNANQWGASARAAGYSVGTTPRVGA 387
Y GQCTWG + + +G N GN W +A + G G+TP+ GA
Sbjct: 810 YAYGQCTWGVAARLNQLGLKLKGRNGEKISIINTMGNGQDWVRTAASLGGETGSTPKAGA 869
Query: 388 VAVWPYDGGG----YGHVAVVTSVANNSSIQVMESNYAGN 423
+ + G G YGHVA + V + S + E+NY GN
Sbjct: 870 IVSFVGGGHGSPAEYGHVAFLEKVYPDGSFLISETNYNGN 909
>gi|29374894|ref|NP_814047.1| N-acetylmuramoyl-L-alanine amidase,
family 4 [Enterococcus faecalis V583]
gi|29342352|gb|AAO80118.1| N-acetylmuramoyl-L-alanine amidase,
family 4 [Enterococcus faecalis V583]
Length = 503
Score = 56.2 bits (134), Expect = 1e-06
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 334 RSYDSSNTYPMGQCTWGAKSMASWVGN----YWGNANQWGASARAAGYSVGTTPRVGAVA 389
++YD+ N+Y G CT + + +G GN WG + RA GY V TP+ GA
Sbjct: 382 KNYDTFNSYAWGNCTQYVYNRITQLGKRVDLTMGNGQDWGETGRARGYKVSRTPKAGAAV 441
Query: 390 VWPYDGGG----YGHVAVVTSVANNSSIQVMESNYAG 422
+P G YGHVA V V + SI + E N G
Sbjct: 442 SFPAGVLGADNTYGHVAFVEKVFKDGSILISEMNVKG 478
>gi|16804542|ref|NP_466027.1| similar to cell wall binding proteins
[Listeria monocytogenes EGD-e]
gi|25517230|pir||AH1387 cell wall binding proteins homolog lmo2504
[imported] - Listeria monocytogenes (strain EGD-e)
gi|16411992|emb|CAD00582.1| lmo2504 [Listeria monocytogenes]
Length = 436
Score = 55.8 bits (133), Expect = 1e-06
Identities = 72/308 (23%), Positives = 139/308 (44%), Gaps = 30/308 (9%)
Query: 6 LSAVLVSGVTLGTAAVTVN------------ADDFDSKIAATDSVINTLSGQQAAAQNQV 53
LS +++S G A T+N + D I + +S +N L + A ++
Sbjct: 11 LSLLIISAPLTGAHADTINDMQKRQNEIEQKKSEIDKNIDSKNSELNHLESAEKDAAKEL 70
Query: 54 TAIKGQVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KG 112
++ + + E E + + ++L +E++ L N I R + L + R+ Q G
Sbjct: 71 ESLMKSLDDTNKKLKEQEDKVSSENEKLKKLQKEMEKLRNDIRDRQKVLDNRARAIQTTG 130
Query: 113 NLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEA------KQIENQ 166
T+Y++ I + + V+RV + +V A++ ++ Q+ D+ L+ K++EN
Sbjct: 131 TATSYLDMIFEADDFKELVDRVTVVSAIVKADQNIMQDQKDDQDKLKVAESTSEKKLENL 190
Query: 167 NAI--------NTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAK 218
+ N + + KQ + ALA ++ ++ Q L+++ + +E+ L A
Sbjct: 191 KVLAVELEVSKNNMESQKQEKNDLVMALANKKDLTKSEQTLLASEQGALTDEEKRL--AS 248
Query: 219 AQAEEAARKAAEAQAAAEAKAQAEAKAQAESVAKAQAAAQVESATAPTETVQTQPRTEIK 278
A E A++ A +AA E + Q EA A + + + A S+ TETV + IK
Sbjct: 249 NIAGEKAKQEAAIKAAEEKRMQ-EAAAASSAKSAAVVKQPSSSSNEATETVSSGGGQFIK 307
Query: 279 PSNLTATS 286
P++ TS
Sbjct: 308 PASGILTS 315
>gi|6782409|emb|CAB70620.1| transfer protein [Streptococcus
thermophilus]
gi|15485458|emb|CAC67552.1| putative transfer protein
[Streptococcus thermophilus]
Length = 370
Score = 55.5 bits (132), Expect = 2e-06
Identities = 38/112 (33%), Positives = 53/112 (46%), Gaps = 13/112 (11%)
Query: 341 TYPMGQCTW----GAKSMASWVGNYWGNANQWGASARAAGYSVGTTP-RVGAVAVWPYDG 395
+YP GQCTW K + G Y GN QW A GY TP A++ P
Sbjct: 261 SYPWGQCTWFVYNRGKEVGVSFGEYMGNGGQW---MNAPGYQTTHTPTEHSALSFSPRQA 317
Query: 396 GG---YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYI 444
G YGH+A V V ++ SI + ESN G + + +YR +F+ + Y+
Sbjct: 318 GADPTYGHIAFVEQVKSDGSILISESNVKG-LGVISYR-TFDAETAKQFTYV 367
>gi|23099858|ref|NP_693324.1| hypothetical protein [Oceanobacillus
iheyensis HTE831]
gi|22778089|dbj|BAC14359.1| hypothetical conserved protein
[Oceanobacillus iheyensis HTE831]
Length = 408
Score = 55.1 bits (131), Expect = 2e-06
Identities = 66/277 (23%), Positives = 122/277 (43%), Gaps = 38/277 (13%)
Query: 15 TLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQVGALESQQS----EL 70
TL TA V + + +A ++V L QQ+ Q + AIK + ES+ + EL
Sbjct: 8 TLTTATVVGLSSTLFTGVAQAETV-EDLESQQSQIQEERDAIKADLSDAESEIADVLIEL 66
Query: 71 EAQNAQLEAVS------------------------QQLGQEIQTLSNKIVARNESLKKQV 106
E N ++E V ++L ++I L I R E LK++
Sbjct: 67 EELNKEIERVDNALKENEEKMDETQDKIADREAEVEKLEEDIAELEEAIEKRYEILKERA 126
Query: 107 RSAQK-GNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIEN 165
S Q+ G Y+ I ++ D + RV A+ ++ ++ ++ QQEADK +E KQ E
Sbjct: 127 ISLQQSGGEITYLEVIFGAQDFGDFITRVQAVNKITDSDTSLIEQQEADKQEVETKQDEV 186
Query: 166 QNAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAE-EA 224
+ ++ + + I+ A + Q+++ + + +L + ++ +L+ K + E E
Sbjct: 187 VSKLDDLKDMEVEIKGMLATIEEQKSENDVKKDDL-------KEKENNLVAMKDELEVED 239
Query: 225 ARKAAEAQAAAEAKAQAEAKAQAESVAKAQAAAQVES 261
+R A + + A + A +VA A + ES
Sbjct: 240 SRLATLEKDVERSLNTATSPAPNTAVASASVGSNSES 276
>gi|22537435|ref|NP_688286.1| Tn5252, Orf28 [Streptococcus
agalactiae 2603V/R]
gi|22534312|gb|AAN00159.1|AE014251_3 Tn5252, Orf28 [Streptococcus
agalactiae 2603V/R]
Length = 933
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 342 YPMGQCTWGAKSMASWVG--------------NYWGNANQWGASARAAGYSVGTTPRVGA 387
Y GQCTWG + + +G + GN W +A + G GT+P+ GA
Sbjct: 812 YAYGQCTWGVAARINQLGLKLKGKNGEKIPIISTMGNGQDWVRTAASLGGETGTSPQEGA 871
Query: 388 VAVWPYDGGG----YGHVAVVTSVANNSSIQVMESNYAGN 423
+ + G G YGHVA V V + S + E+NY GN
Sbjct: 872 ILSFAGGGHGTPTEYGHVAFVEKVYPDGSFLISETNYNGN 911
>gi|15893600|ref|NP_346949.1| Cell wall-associated hydrolase
[Clostridium acetobutylicum]
gi|25499636|pir||F96937 cell wall-associated hydrolase [imported] -
Clostridium acetobutylicum
gi|15023151|gb|AAK78289.1|AE007545_6 Cell wall-associated hydrolase
[Clostridium acetobutylicum]
Length = 392
Score = 53.5 bits (127), Expect = 7e-06
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 3 KRILSAVLVSGVTLGTAAVTVNA---DDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQ 59
KRILS V+ G+ + +V A D SK A+ + L + + + Q
Sbjct: 25 KRILSTVVAFGIVASMGSTSVFAAPLQDAQSKYDASHKNVQNL-------EEDIQKMDNQ 77
Query: 60 VGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQ-KGNLTNYI 118
+ + SQ+ ++ + Q + Q +I I + +VR+ G+ +Y+
Sbjct: 78 IETIMSQRDSVDKKITQSQQNINQAQNDIAVSKENIREEKDKFADRVRALYISGSTQSYV 137
Query: 119 NTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQA 178
+ +L SKS SD ++R+ AI+++ ++K+++ + + +EAK
Sbjct: 138 DILLKSKSFSDMISRIDAIKQISDYDQKLVSNLKDSQGRIEAK----------------- 180
Query: 179 IENNKAALATQRAQLEAAQLELSAQLTTVQNEKA--SLIQAKAQAEEAARKAAE 230
K + +++ QLEA E +L + +EK+ +++ A+A+A+E ++ AAE
Sbjct: 181 ----KDKIVSEKQQLEALNKENDTKLKQLNDEKSKQNVLIAQAKADE-SKNAAE 229
>gi|23099869|ref|NP_693335.1| hypothetical protein [Oceanobacillus
iheyensis HTE831]
gi|22778100|dbj|BAC14370.1| hypothetical conserved protein
[Oceanobacillus iheyensis HTE831]
Length = 401
Score = 53.5 bits (127), Expect = 7e-06
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 21/274 (7%)
Query: 27 DFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQVGALESQQSELEAQNAQLEAVSQQLGQ 86
D + K+ T +NTLS + + Q ++ + + E + +E + LE +
Sbjct: 49 DSEQKVMDTVEELNTLSTKIDSLQVELEEKEALIDETEQKMNETMNNISDLE-------E 101
Query: 87 EIQTLSNKIVARNESLKKQVRSAQK-GNLTNYINTILNSKSVSDAVNRVVAIREVVSANE 145
EI+ L KI R + LK ++ S Q+ G Y+ I S+S D VNRV A+ ++ ++
Sbjct: 102 EIKDLEEKIEERFDILKDRLVSVQQTGGDITYLEVIFGSQSFHDFVNRVSAVNKITDSDA 161
Query: 146 KMLAQQEADKAALEAKQ---IENQNAINTVAAN----KQAIENNKAALATQRAQLEAAQL 198
++ QQE D LE + + N +N + K +E Q+++LE+ +
Sbjct: 162 ALIEQQELDMQKLEDNKQQIVVKLNDLNELKDEQDQMKADVEKKLVVQKNQQSELESKRN 221
Query: 199 ELSAQLTTVQNEKASL------IQAKAQAEEAARKAAEAQAAAEAKAQAEAKAQAESVAK 252
L A + ++ + L I+ Q EE A+ A A AE KAQA + ES
Sbjct: 222 SLQAMVEELEMSDSKLASLESNIKTDIQKEEEAKAKAIAAKEAEKKAQASKQEAPESEVL 281
Query: 253 AQAAAQVESATAPTETVQTQPRTEIKPSNLTATS 286
+ ++ E P + + + + K +TAT+
Sbjct: 282 NSSTSKDEEENKPVKPEKPEANNDNKTFTVTATA 315
>gi|21282356|ref|NP_645444.1| ORFID:MW0627~secretory antigen SsaA
homologue [Staphylococcus aureus subsp. aureus MW2]
gi|21203793|dbj|BAB94492.1| MW0627 [Staphylococcus aureus subsp.
aureus MW2]
Length = 265
Score = 53.1 bits (126), Expect = 9e-06
Identities = 50/186 (26%), Positives = 73/186 (38%), Gaps = 11/186 (5%)
Query: 249 SVAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPS 308
S A+ + ++ +A + TVQ + N+ A+ +V A + P+
Sbjct: 73 SDAQNSSNTSPQAGSASSHTVQAG-----ESLNIIASRYGVSVDQLMAANNLRGYLIMPN 127
Query: 309 VVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGA----KSMASWVGNYWGN 364
+ + T S S++ N Y GQCTW S + YW +
Sbjct: 128 QTLQIPNGGSGGTTPTATTGSNGNASSFNHQNLYTAGQCTWYVFDRRAQAGSPISTYWSD 187
Query: 365 ANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNM 424
A W +A GY V TP VG++ G YGHVA V V + SI + E NY
Sbjct: 188 AKYWAGNAANDGYQVNNTPSVGSIM--QSTPGPYGHVAYVERVNGDGSILISEMNYTYGP 245
Query: 425 SIGNYR 430
NYR
Sbjct: 246 YNMNYR 251
>gi|15675799|ref|NP_269973.1| M protein type 1 [Streptococcus
pyogenes]
gi|13623026|gb|AAK34694.1| M protein type 1 [Streptococcus
pyogenes M1 GAS]
Length = 484
Score = 53.1 bits (126), Expect = 1e-05
Identities = 74/293 (25%), Positives = 129/293 (43%), Gaps = 17/293 (5%)
Query: 39 INTLSGQQAAAQNQVTAIKGQVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVAR 98
+ T++ +Q +N + K ++ L S++ +L + A+LE Q Q+L + A
Sbjct: 193 LETITREQEINRNLLGNAKLELDQLSSEKEQLTIEKAKLEEEKQISDASRQSLRRDLDAS 252
Query: 99 NESLKKQVRSAQKGNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAAL 158
E+ KKQV NLT ++ + K +SDA + +R + A+ + Q E D A L
Sbjct: 253 REA-KKQVEK-DLANLTAELDKVKEDKQISDASRQ--GLRRDLDASREAKKQVEKDLANL 308
Query: 159 EAKQIENQNAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAK 218
A+ + + A++Q + + A + Q+E A E +++L ++ L ++K
Sbjct: 309 TAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESK 368
Query: 219 AQAEEAARKAAEAQAAAEAKAQA---EAKAQAESVAKAQAAAQVESATAPTETVQT---- 271
E ++ AE QA EA+A+A + QAE +AK +A +S T T+
Sbjct: 369 KLTE---KEKAELQAKLEAEAKALKEQLAKQAEELAKLRAGKASDSQTPDTKPGNKAVPG 425
Query: 272 ---QPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSVVTKAVEAPKAVV 321
P+ KP+ A T + T P T ++ A AVV
Sbjct: 426 KGQAPQAGTKPNQNKAPMKETKRQLPSTGETANPFFTAAALTVMATAGVAAVV 478
>gi|1084196|pir||S46489 M1 protein precursor - Streptococcus
pyogenes
Length = 484
Score = 53.1 bits (126), Expect = 1e-05
Identities = 74/293 (25%), Positives = 129/293 (43%), Gaps = 17/293 (5%)
Query: 39 INTLSGQQAAAQNQVTAIKGQVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVAR 98
+ T++ +Q +N + K ++ L S++ +L + A+LE Q Q+L + A
Sbjct: 193 LETITREQEINRNLLGNAKLELDQLSSEKEQLTIEKAKLEEEKQISDASRQSLRRDLDAS 252
Query: 99 NESLKKQVRSAQKGNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAAL 158
E+ KKQV NLT ++ + K +SDA + +R + A+ + Q E D A L
Sbjct: 253 REA-KKQVEK-DLANLTAELDKVKEDKQISDASRQ--GLRRDLDASREAKKQVEKDLANL 308
Query: 159 EAKQIENQNAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAK 218
A+ + + A++Q + + A + Q+E A E +++L ++ L ++K
Sbjct: 309 TAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESK 368
Query: 219 AQAEEAARKAAEAQAAAEAKAQA---EAKAQAESVAKAQAAAQVESATAPTETVQT---- 271
E ++ AE QA EA+A+A + QAE +AK +A +S T T+
Sbjct: 369 KLTE---KEKAELQAKLEAEAKALKEQLAKQAEELAKLRAGKASDSQTPDTKPGNKAVPG 425
Query: 272 ---QPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSVVTKAVEAPKAVV 321
P+ KP+ A T + T P T ++ A AVV
Sbjct: 426 KGQAPQAGTKPNQNKAPMKETKRQLPSTGETANPFFTAAALTVMATAGVAAVV 478
>gi|15923655|ref|NP_371189.1| secretory antigen SsaA homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|15926342|ref|NP_373875.1| secretory antigen SsaA homologue
[Staphylococcus aureus subsp. aureus N315]
gi|25506159|pir||B89837 hypothetical protein SA0620 [imported] -
Staphylococcus aureus (strain N315)
gi|13700556|dbj|BAB41853.1| SA0620 [Staphylococcus aureus subsp.
aureus N315]
gi|14246434|dbj|BAB56827.1| secretory antigen SsaA homologue
[Staphylococcus aureus subsp. aureus Mu50]
Length = 265
Score = 52.8 bits (125), Expect = 1e-05
Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 11/175 (6%)
Query: 260 ESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSVVTKAVEAPKA 319
++ +A + TVQ + N+ A+ +V A + P+ +
Sbjct: 84 QAGSASSHTVQAG-----ESLNIIASRYGVSVDQLMAANNLRGYLIMPNQTLQIPNGGSG 138
Query: 320 VVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGA----KSMASWVGNYWGNANQWGASARAA 375
+ T S S++ N Y GQCTW S + YW +A W +A
Sbjct: 139 GTTPTATTGSNGNASSFNHQNLYTAGQCTWYVFDRRAQAGSPISTYWSDAKYWAGNAAND 198
Query: 376 GYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNYAGNMSIGNYR 430
GY V TP VG++ G YGHVA V V + SI + E NY NYR
Sbjct: 199 GYQVNNTPSVGSIM--QSTPGPYGHVAYVERVNGDGSILISEMNYTYGPYNMNYR 251
>gi|23336459|ref|ZP_00121675.1| hypothetical protein
[Bifidobacterium longum DJO10A]
Length = 586
Score = 52.8 bits (125), Expect = 1e-05
Identities = 34/86 (39%), Positives = 45/86 (51%), Gaps = 8/86 (9%)
Query: 341 TYPMGQCTWGAKSMASWVGN----YWGNANQWGASARAAGYSVGTTPRVGAVAVWP--YD 394
TY GQCTW A + +G Y G+ W +SAR GY G ++G VA + Y
Sbjct: 475 TYATGQCTWWAAARRLQIGKPVDGYMGDGWMWASSARKLGYPTGGDIQLGDVASFTKGYL 534
Query: 395 GGG--YGHVAVVTSVANNSSIQVMES 418
G YGHVA+V + +N SI + ES
Sbjct: 535 GASTDYGHVAIVEEIKDNGSIVISES 560
>gi|30525885|gb|AAP32473.1| M protein [Streptococcus pyogenes]
Length = 465
Score = 52.4 bits (124), Expect = 2e-05
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 13/253 (5%)
Query: 39 INTLSGQQAAAQNQVTAIKGQVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVAR 98
+ T++ +Q +N + K ++ L S++ +L + A+LE Q Q+L + A
Sbjct: 185 LETITREQEINRNLLGNAKLELDQLSSEKEQLTIEKAKLEEEKQISDASRQSLRRDLDAS 244
Query: 99 NESLKKQVRSAQKGNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAAL 158
E+ KKQV NLT ++ + K +SDA + +R + A+ + Q E D A L
Sbjct: 245 REA-KKQVEK-DLANLTAELDKVKEDKQISDASRQ--GLRRDLDASREAKKQVEKDLANL 300
Query: 159 EAKQIENQNAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAK 218
A+ + + A++Q + + A + Q+E A E +++L A+L +
Sbjct: 301 TAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKL-------AALEKLN 353
Query: 219 AQAEEAARKAAEAQAAAEAKAQAEAKAQAESVAK-AQAAAQVESATAP-TETVQTQPRTE 276
+ EE+ + + +A +AK +AEAKA E +AK A+ A++ + A ++T T+P +
Sbjct: 354 KELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAGKASDSQTPDTKPGNK 413
Query: 277 IKPSNLTATSSAT 289
P A + T
Sbjct: 414 AVPGKGQAPQAGT 426
>gi|18309260|ref|NP_561194.1| conserved hypothetical protein
[Clostridium perfringens]
gi|18143936|dbj|BAB79984.1| conserved hypothetical protein
[Clostridium perfringens str. 13]
Length = 432
Score = 52.4 bits (124), Expect = 2e-05
Identities = 45/218 (20%), Positives = 105/218 (47%), Gaps = 4/218 (1%)
Query: 1 MKKRILSAVLVSGVTLG---TAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIK 57
MKK+I+S VL + +T G + T DD ++ + ++ + ++++ +
Sbjct: 1 MKKKIISTVLAATMTFGVGHSVFATPLTDDQKQQMEQSQDKYADINSKIRELEDKIDGLS 60
Query: 58 GQVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQK-GNLTN 116
++ L Q + + + ++ E + +I+ KI + E L +++R+ K G N
Sbjct: 61 AKIEPLFFQVEKNKEEISKTEESISTVKVQIEESKKKIEKQQEVLGQRIRATYKSGGQAN 120
Query: 117 YINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANK 176
Y+ +L+S + D ++RV AI +V+ +++++ + ++K L+++ E ++ +
Sbjct: 121 YLTALLDSNGIGDFLSRVQAISKVMGMDKQVIDELTSEKEKLDSQVKELEDKTAELNKLN 180
Query: 177 QAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASL 214
++ L +A+ E A ++ A+ V E A L
Sbjct: 181 SETQSKIDELNKMKAEQEGAIKDMKAEQEKVVGELAPL 218
>gi|15902008|ref|NP_346612.1| choline binding protein D
[Streptococcus pneumoniae TIGR4]
gi|25389630|pir||C95257 choline binding protein D [imported] -
Streptococcus pneumoniae (strain TIGR4)
gi|9454349|gb|AAF87768.1|AF278686_1 choline binding protein D; CbpD
[Streptococcus pneumoniae]
gi|14973713|gb|AAK76252.1| choline binding protein D [Streptococcus
pneumoniae TIGR4]
Length = 448
Score = 52.0 bits (123), Expect = 2e-05
Identities = 27/59 (45%), Positives = 37/59 (61%), Gaps = 3/59 (5%)
Query: 362 WGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNY 420
+GNAN+WG AR GY V TP +G++ W G YGHVA V++V + I++ E NY
Sbjct: 95 YGNANEWGHRARREGYRVDNTPTIGSI-TWS-TAGTYGHVAWVSNVMGD-QIEIEEYNY 150
>gi|29347202|ref|NP_810705.1| putative cell surface protein
[Bacteroides thetaiotaomicron VPI-5482]
gi|29339101|gb|AAO76899.1| putative cell surface protein
[Bacteroides thetaiotaomicron VPI-5482]
Length = 1008
Score = 52.0 bits (123), Expect = 2e-05
Identities = 65/265 (24%), Positives = 114/265 (42%), Gaps = 27/265 (10%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQV 60
M K+ LS +L + + V+ D+D I +++ + GQ+ +++TA++ +
Sbjct: 1 MNKKFLSVILFGALMTVSTGTFVSCKDYDDDI---NNLQEQIDGQKNDLNSKITAVESSI 57
Query: 61 GALESQQSELEAQ-NAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTNYIN 119
+L++ QS L+++ A + S+ + A E +K ++++A K ++
Sbjct: 58 SSLQTAQSSLQSEIAAAKDEASKAALAAQEAAIATAKAELEKVKAELQAADKADM----- 112
Query: 120 TILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINT----VAAN 175
+ ++ I + E+ E AAL A Q +I T V AN
Sbjct: 113 --------ATVDGKLAEISGRIQTLEQFKTTTETTLAALSAADTNLQKSITTLQADVLAN 164
Query: 176 KQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAA 235
+ I NKAA+ Q A LEA + + KA L K QA E +A A+ AA
Sbjct: 165 AEQIGRNKAAIEAQIAALEAYK---GTNDDAIAGLKADL--EKLQAGELT-EAMVAKIAA 218
Query: 236 EAKAQAEAKAQAESVAKAQAAAQVE 260
+ AK + S A ++A VE
Sbjct: 219 QVTEVVGAKLELISAAFSKAVTHVE 243
>gi|15675802|ref|NP_269976.1| immunogenic secreted protein precursor
[Streptococcus pyogenes]
gi|13623029|gb|AAK34697.1| immunogenic secreted protein precursor
[Streptococcus pyogenes M1 GAS]
Length = 541
Score = 51.6 bits (122), Expect = 2e-05
Identities = 42/114 (36%), Positives = 52/114 (44%), Gaps = 12/114 (10%)
Query: 339 SNTYPMGQCTWGA----KSMASWVGNYWGNANQWGASARAAGYSVGTTPRVG-AVAVWPY 393
S TY GQCTW A K + V Y GN W R G+ P+VG V+ P
Sbjct: 425 SETYSFGQCTWYAYNRVKELGYQVDRYMGNGGDW---QRKPGFVTTHKPKVGYVVSFAPG 481
Query: 394 DGGG---YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYI 444
G YGHVAVV + + SI + ESN G +I +YR AS Y +
Sbjct: 482 QAGADATYGHVAVVEQIKEDGSILISESNVMGLGTI-SYRTFTAEQASLLTYVV 534
>gi|23465747|ref|NP_696350.1| hypothetical protein with weak
C-terminal similarity to TraG [Bifidobacterium longum
NCC2705]
gi|23326432|gb|AAN24986.1|AE014742_7 hypothetical protein with weak
C-terminal similarity to TraG [Bifidobacterium longum
NCC2705]
Length = 453
Score = 51.6 bits (122), Expect = 3e-05
Identities = 103/421 (24%), Positives = 164/421 (38%), Gaps = 56/421 (13%)
Query: 11 VSGVTLGTAAVTVNADDF-DSKIAATDSVINTLSGQQAAAQNQVTAIKGQVGALESQQSE 69
++G + A + DD ++KI A + + + A AQ++ A G++ A + +
Sbjct: 61 LAGASQDLANKVLELDDLTNNKIVAAQAKVTQANEDAATAQDEADAASGRLSAAQKDKET 120
Query: 70 LEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTNYINTILNSKSVSD 129
LE Q Q + L AR+E N ++ ++ + + S D
Sbjct: 121 LEEQIKQTGKDYDDAHAAVAQL-----ARDE--------MHGSNASDVMSVVTGATSTQD 167
Query: 130 AVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAIENNKAALATQ 189
VN + + R+ +S NE A A + + E AI A + + KAA A
Sbjct: 168 FVNSMQS-RDALSRNEANAASSAATSLSTSKNRGERLAAIEKQIAVLKTQSDEKAASAQT 226
Query: 190 RAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEAKAQAEAKAQAES 249
A+ T Q+E+ +L + + + E + E + ++ AK A++
Sbjct: 227 AAE-------------TAQSERDALDKLRQEGET---RRNELSSMVDSLDSQSAKQAAQT 270
Query: 250 VAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSV 309
V A+QV+S + Q +A V T T VT
Sbjct: 271 VL---IASQVDSYNRQFQKEQ--------------QDAANRVDTGNQGGTPSTPVTPAPA 313
Query: 310 VTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGA----KSMASWVGNYWGNA 365
A A + +V + D N Y GQCT+ A + M +Y GN
Sbjct: 314 PAPAPAPAPAPAPAPAPSVGGQGTSNGDYGNAYAAGQCTYWAYERRRQMGIGTPSYLGNG 373
Query: 366 NQWGASARAAGYSVGTTPRVGAVAVW--PYDG--GGYGHVAVVTSVANNSSIQVMESNYA 421
W SA A G V TP+VGA + DG G YGHVAVV +V + + Q+ E N+
Sbjct: 374 GFWWRSAPAYGLRVDHTPQVGAALSFLPGQDGADGTYGHVAVVEAVYGDGTFQISEMNWG 433
Query: 422 G 422
G
Sbjct: 434 G 434
>gi|1399011|gb|AAB52379.1| immunogenic secreted protein precursor
Length = 534
Score = 51.6 bits (122), Expect = 3e-05
Identities = 42/114 (36%), Positives = 52/114 (44%), Gaps = 12/114 (10%)
Query: 339 SNTYPMGQCTWGA----KSMASWVGNYWGNANQWGASARAAGYSVGTTPRVG-AVAVWPY 393
S TY GQCTW A K + V Y GN W R G+ P+VG V+ P
Sbjct: 418 SETYSFGQCTWYAYNRVKELGYQVDRYMGNGGDW---QRKPGFVTTHKPKVGYVVSFAPG 474
Query: 394 DGGG---YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYI 444
G YGHVAVV + + SI + ESN G +I +YR AS Y +
Sbjct: 475 QAGADATYGHVAVVEQIKEDGSILISESNVMGLGTI-SYRTFTAEQASLLTYVV 527
>gi|23335787|ref|ZP_00121020.1| hypothetical protein
[Bifidobacterium longum DJO10A]
Length = 471
Score = 51.6 bits (122), Expect = 3e-05
Identities = 101/421 (23%), Positives = 165/421 (38%), Gaps = 60/421 (14%)
Query: 11 VSGVTLGTAAVTVNADDF-DSKIAATDSVINTLSGQQAAAQNQVTAIKGQVGALESQQSE 69
++G + A + DD ++KI A + + + A AQ++ A G++ A + +
Sbjct: 83 LAGASQDLANKVLELDDLTNNKIVAAQAKVTQANEDAATAQDEADAASGRLSAAQKDKET 142
Query: 70 LEAQNAQLEAVSQQLGQEIQTLSNKIVARNESLKKQVRSAQKGNLTNYINTILNSKSVSD 129
LE Q Q + L AR+E N ++ ++ + + S D
Sbjct: 143 LEEQIKQTGKDYDDAHAAVAQL-----ARDE--------MHGSNASDVMSVVTGATSTQD 189
Query: 130 AVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAINTVAANKQAIENNKAALATQ 189
VN + + R+ +S NE A A + + E AIE A L TQ
Sbjct: 190 FVNSMQS-RDALSRNEANAASSAATSLSTSKNRGERL----------AAIEKQIAVLKTQ 238
Query: 190 RAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAEAQAAAEAKAQAEAKAQAES 249
A +AA + +A+ T Q+E+ +L + + + E + E + ++ AK A +
Sbjct: 239 -ADEKAASAQTAAE--TAQSERDALDKLRQEGEA---RRDELSSMIDSLDSQSAKQAART 292
Query: 250 VAKAQAAAQVESATAPTETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSV 309
V A+QV+S + Q + N T S P +
Sbjct: 293 VL---IASQVDSYNRQFQKEQQDAANRVDTGNQGGTPST------------------PVI 331
Query: 310 VTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGA----KSMASWVGNYWGNA 365
A A + +V + D N Y GQCT+ A + M +Y GN
Sbjct: 332 PAPAPAPAPAPAPAPAPSVGGQGTSNGDYGNAYTAGQCTYWAYERRRQMGIGTPSYLGNG 391
Query: 366 NQWGASARAAGYSVGTTPRVGAVAVW--PYDG--GGYGHVAVVTSVANNSSIQVMESNYA 421
W SA + G V P+VGA + DG G +GHVAVV +V + + Q+ E N+
Sbjct: 392 GDWWRSAPSYGLRVDHNPQVGAALSFLPGQDGADGTWGHVAVVEAVYGDGTFQISEMNWG 451
Query: 422 G 422
G
Sbjct: 452 G 452
>gi|421440|pir||S35401 M1 protein precursor - Streptococcus pyogenes
gi|311758|emb|CAA44062.1| M protein type 1 [Streptococcus pyogenes]
Length = 484
Score = 51.2 bits (121), Expect = 3e-05
Identities = 73/293 (24%), Positives = 127/293 (42%), Gaps = 17/293 (5%)
Query: 39 INTLSGQQAAAQNQVTAIKGQVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVAR 98
++T++ +Q +N + K ++ L S++ +L + A+LE Q Q+L + A
Sbjct: 193 LDTITREQEINRNLLGNRKLELDQLSSEKEQLTIEKAKLEEEKQISDASRQSLRRDLDAS 252
Query: 99 NESLKKQVRSAQKGNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAAL 158
E+ KKQV NLT ++ + K +SDA + +R + A+ + Q E D A L
Sbjct: 253 REA-KKQVEK-DLANLTAELDKVKEDKQISDASRQ--GLRRDLDASREAKKQVEKDLANL 308
Query: 159 EAKQIENQNAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAK 218
A+ + + A++Q + + A + Q+E A E +++L ++ L ++K
Sbjct: 309 TAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESK 368
Query: 219 AQAEEAARKAAEAQAAAEAKAQA---EAKAQAESVAKAQAAAQVESATAPTETVQ----- 270
E ++ AE QA EA+A QAE +AK +A +S T T+
Sbjct: 369 KLTE---KEKAELQAKLEAEANVLKDPLAKQAEELAKLRAGKASDSQTPDTKPGNKAVPG 425
Query: 271 --TQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSVVTKAVEAPKAVV 321
P+ KP+ A T + T P T ++ A AVV
Sbjct: 426 KGQAPQAGTKPNQNKAPMKETKRQLPSTGETANPFFTAAALTVMATAGVAAVV 478
>gi|24378708|ref|NP_720663.1| putative transfer protein
[Streptococcus mutans UA159]
gi|24376573|gb|AAN57969.1|AE014870_5 putative transfer protein
[Streptococcus mutans UA159]
Length = 365
Score = 51.2 bits (121), Expect = 3e-05
Identities = 35/118 (29%), Positives = 52/118 (43%), Gaps = 11/118 (9%)
Query: 335 SYDSSNTYPMGQCTW----GAKSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAV 390
+Y+ S YP GQCTW AK + Y GN QW + GY TP+
Sbjct: 248 AYEGSENYPQGQCTWYVYNRAKQLGVSFSPYMGNGGQW---YQVQGYHSSHTPKAHTALS 304
Query: 391 WPYDGGG----YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYI 444
+ G YGHVA V +V ++ SI + E N G ++ +F+ + +Y+
Sbjct: 305 FVNGQAGSDPTYGHVAFVEAVKDDGSILISEMNVYGQPAMTVAYRTFDAETAKQFWYV 362
>gi|25011184|ref|NP_735579.1| unknown [Streptococcus agalactiae
NEM316]
gi|23095583|emb|CAD46792.1| unknown [Streptococcus agalactiae
NEM316]
Length = 896
Score = 51.2 bits (121), Expect = 3e-05
Identities = 37/114 (32%), Positives = 48/114 (41%), Gaps = 8/114 (7%)
Query: 317 PKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKSMASWVG----NYWGNANQWGASA 372
PK S S V + NTYP+GQCTW + S G N+ GN W +
Sbjct: 760 PKEYSSKLKSYPSAATVSRSLNGNTYPIGQCTWYVYNRLSEAGAPAVNWLGNGQDWVRNL 819
Query: 373 RAAGYSVGTTPRVGAVAV----WPYDGGGYGHVAVVTSVANNSSIQVMESNYAG 422
A G++ P GAV + Y YGHV+ V V + + V E N G
Sbjct: 820 VAKGWTFSNKPVAGAVCSTAGGFDYTMPTYGHVSYVEHVNGDGTFLVSECNVMG 873
>gi|15904047|ref|NP_359597.1| Choline binding protein D
[Streptococcus pneumoniae R6]
gi|25509416|pir||C98122 choline binding protein D [imported] -
Streptococcus pneumoniae (strain R6)
gi|15459711|gb|AAL00808.1| Choline binding protein D [Streptococcus
pneumoniae R6]
Length = 448
Score = 51.2 bits (121), Expect = 4e-05
Identities = 27/59 (45%), Positives = 37/59 (61%), Gaps = 3/59 (5%)
Query: 362 WGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGGYGHVAVVTSVANNSSIQVMESNY 420
+GNAN+WG AR GY V TP +G++ W G YGHVA V++V + I++ E NY
Sbjct: 95 YGNANEWGHRARREGYRVDNTPTIGSI-TWS-TAGTYGHVAWVSNVMGD-QIEIEEYNY 150
>gi|21911267|ref|NP_665535.1| immunogenic secreted protein precursor
[Streptococcus pyogenes MGAS315]
gi|28896640|ref|NP_802990.1| putative immunogenic secreted protein
precursor [Streptococcus pyogenes SSI-1]
gi|21905481|gb|AAM80338.1| immunogenic secreted protein precursor
[Streptococcus pyogenes MGAS315]
gi|28811894|dbj|BAC64823.1| putative immunogenic secreted protein
precursor [Streptococcus pyogenes SSI-1]
Length = 542
Score = 50.8 bits (120), Expect = 4e-05
Identities = 41/114 (35%), Positives = 51/114 (43%), Gaps = 12/114 (10%)
Query: 339 SNTYPMGQCTWGA----KSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYD 394
S TY GQCTW A K + V Y GN W R G+ P+VG V +
Sbjct: 426 SETYSFGQCTWYAYNRVKELGYQVDRYMGNGGDW---QRKPGFVTTHKPKVGYVVSFAPG 482
Query: 395 GGG----YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYI 444
G YGHVAVV + + SI + ESN G +I +YR AS Y +
Sbjct: 483 QAGADATYGHVAVVEQIKEDGSILISESNVMGLGTI-SYRTFTAEQASLLTYVV 535
>gi|19746914|ref|NP_608050.1| immunogenic secreted protein precursor
[Streptococcus pyogenes MGAS8232]
gi|19749161|gb|AAL98549.1| immunogenic secreted protein precursor
[Streptococcus pyogenes MGAS8232]
Length = 538
Score = 50.8 bits (120), Expect = 5e-05
Identities = 41/114 (35%), Positives = 51/114 (43%), Gaps = 12/114 (10%)
Query: 339 SNTYPMGQCTWGA----KSMASWVGNYWGNANQWGASARAAGYSVGTTPRVGAVAVWPYD 394
S TY GQCTW A K + V Y GN W R G+ P+VG V +
Sbjct: 422 SETYSFGQCTWYAYNRVKELGYQVDRYMGNGGDW---QRKPGFVTTHKPKVGYVVSFAPG 478
Query: 395 GGG----YGHVAVVTSVANNSSIQVMESNYAGNMSIGNYRGSFNPSASGSVYYI 444
G YGHVAVV + + SI + ESN G +I +YR AS Y +
Sbjct: 479 QAGADATYGHVAVVEQIKEDGSILISESNVMGLGTI-SYRTFTAEQASLLTYVV 531
>gi|486711|pir||S34978 M1.1 protein precursor - Streptococcus
pyogenes
gi|49402|emb|CAA79893.1| M1.1 protein [Streptococcus pyogenes]
Length = 484
Score = 50.1 bits (118), Expect = 7e-05
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 13/253 (5%)
Query: 39 INTLSGQQAAAQNQVTAIKGQVGALESQQSELEAQNAQLEAVSQQLGQEIQTLSNKIVAR 98
+ ++ +Q +N + K ++ L S++ +L + A+LE Q Q+L + A
Sbjct: 193 LEAITREQEINRNLLGNRKLELDQLSSEKEQLTIEKAKLEEEKQISDASRQSLRRDLDAS 252
Query: 99 NESLKKQVRSAQKGNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAAL 158
E+ KKQV NLT ++ + K +SDA + +R + A+ + Q E D A L
Sbjct: 253 REA-KKQVEK-DLANLTAELDKVKEDKQISDASRQ--GLRRDLDASREAKKQVEKDLANL 308
Query: 159 EAKQIENQNAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAK 218
A+ + + A++Q + + A + Q+E A E +++L A+L +
Sbjct: 309 TAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKL-------AALEKLN 361
Query: 219 AQAEEAARKAAEAQAAAEAKAQAEAKAQAESVAK-AQAAAQVESATAP-TETVQTQPRTE 276
+ EE+ + +A+A +AK +AEAKA E +AK A+ A++ + A ++T T+P +
Sbjct: 362 KELEESKKLTEKAKAELQAKLEAEAKALKEQLAKQAEELAKLRAGKASDSQTPDTKPGNK 421
Query: 277 IKPSNLTATSSAT 289
P A + T
Sbjct: 422 AVPGKGQAPQAGT 434
>gi|28209994|ref|NP_780938.1| putative cell wall-associated
hydrolase [Clostridium tetani E88]
gi|28202429|gb|AAO34875.1| putative cell wall-associated hydrolase
[Clostridium tetani E88]
Length = 397
Score = 50.1 bits (118), Expect = 8e-05
Identities = 48/220 (21%), Positives = 106/220 (47%), Gaps = 28/220 (12%)
Query: 1 MKKRILSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQV 60
+ K+I+SA++ G+ + ++ +TV A+ A IN ++N + +K +
Sbjct: 34 VNKKIVSALVALGLII-SSNITVFAEPLSGNRATYQQRIN-------ESRNSLQDVKSKR 85
Query: 61 GALESQQSELEAQNAQLEAVSQQLGQ----------EIQTLSNKIVARNESLKKQ----- 105
LE S++E + Q+E + ++ Q EI+ IV E++KK+
Sbjct: 86 QKLE---SDVEKMDNQIEVLMHKISQTKNKISNTKNEIKKAEKDIVKAEENIKKEQELFN 142
Query: 106 --VRSAQKGNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQI 163
VR+ + +Y++ I+ ++ +SD V++V +I+ ++ ++K+++ + ALE K+
Sbjct: 143 KRVRAMYMNGVGSYLDIIVEAEGLSDLVSKVDSIKRIMDMDKKIISDLNNKRQALEGKKQ 202
Query: 164 ENQNAINTVAANKQAIENNKAALATQRAQLEAAQLELSAQ 203
+ N + A K E+ + + ++ + + EL Q
Sbjct: 203 KLDNDNKKLLALKSENESKLSDINKKKREQDTLLAELRRQ 242
>gi|21693270|gb|AAM75217.1|AF454824_11 EF0011 [Enterococcus
faecalis]
Length = 383
Score = 50.1 bits (118), Expect = 8e-05
Identities = 51/155 (32%), Positives = 62/155 (39%), Gaps = 17/155 (10%)
Query: 267 ETVQTQPRTEIKPSNLTATSSATTVATTTATATNEPKVTQPSV---VTKAVEAPKAVVSS 323
E +Q K S L + T N V VT AP V S
Sbjct: 224 EAIQKYGNAPFKKSELVLNIPGKSPITNEKYGKNSDCVVTSDTSDQVTGQNTAPSLEVPS 283
Query: 324 TPRA-VSKPVVRSYD-SSNTYPMGQCTWGAKSMASWVGN--YW-----GNANQWGASARA 374
+ ++ P + S D + N YP GQCTW A + + +G W GN W SARA
Sbjct: 284 AYKGKLTLPPIDSNDYAGNNYPFGQCTWYAYNRMAQIGKPIEWFSGDGGNGAGWANSARA 343
Query: 375 AGYS-VGTTPRVGAVAVWPYDGGG----YGHVAVV 404
GY+ V P VG A GG YGHVAVV
Sbjct: 344 KGYTVVKVKPSVGWAASMQGGIGGSAPPYGHVAVV 378
>gi|15673889|ref|NP_268064.1| N-acetylmuramidase [Lactococcus lactis
subsp. lactis]
gi|25401989|pir||C86863 N-acetylmuramoyl-L-alanine amidase (EC
3.5.1.28) [imported] - Lactococcus lactis subsp. lactis
(strain IL1403)
gi|12724943|gb|AAK06005.1|AE006420_5 N-acetylmuramidase (EC
3.5.1.28) [Lactococcus lactis subsp. lactis]
Length = 475
Score = 50.1 bits (118), Expect = 9e-05
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 305 TQPSVVTKAVEAPKAVVSSTPRAVSKPVVRSYDSSNTYPMGQCTWGAKS----MASWVGN 360
T V +K E+P A A + Y +++Y G CT + + VG
Sbjct: 327 TTQVVDSKIPESPLAASKLDNSAYPEYNGVEYPGADSYAFGNCTQYVYNRIIQLGGLVGT 386
Query: 361 YWGNANQWGASARAAGYSVGTTPRVGAVAVWPYDGGG----YGHVAVVTSVANNSSIQVM 416
+ GN +WG +A+A GY T P G +P G YGHVA V V +++SI V
Sbjct: 387 HMGNGGEWGINAQAQGYFTTTVPTEGYAVSFPPGVAGSSSEYGHVAFVEKVYSDNSILVS 446
Query: 417 ESNYAGN 423
E N GN
Sbjct: 447 EMNVKGN 453
>gi|30018861|ref|NP_830492.1| Cell wall-binding protein [Bacillus
cereus ATCC 14579]
gi|29894403|gb|AAP07693.1| Cell wall-binding protein [Bacillus
cereus ATCC 14579]
Length = 430
Score = 50.1 bits (118), Expect = 9e-05
Identities = 61/262 (23%), Positives = 127/262 (48%), Gaps = 33/262 (12%)
Query: 6 LSAVLVSGVTLGTAAVTVNADDFDSKIAATDSVINTLSGQQAAAQNQVTAIKGQVGALES 65
+S ++++G+ ++ V V A+ D K+ + + + + A+ ++ +E+
Sbjct: 7 ISCLVLAGIIGLSSTVAVKAESNDEKLNNMQQQLQQNDAEMQKKEQEKQAVSKEIKGIEN 66
Query: 66 QQSELE---AQNAQLEAVSQ-----------QLGQEIQTLSNKIVARNESLKKQVRSAQK 111
+ L A+N + +A Q Q +EI L +K++AR + ++K++ S Q
Sbjct: 67 ELHNLNNTIAKNKEDQAAIQRKIDETHKQIEQKKEEIIVLEDKVLARKDIMRKRMVSVQN 126
Query: 112 -GNLTNYINTILNSKSVSDAVNRVVAIREVVSANEKMLAQQEADKAALEAKQIENQNAIN 170
N + + ++ SK+ +D + R+ A+ ++ A++++L QE D +QIE
Sbjct: 127 SSNTSLVVEVVVESKNFADFLQRMNAVSTILEADKEILRLQEQD-----LRQIEE----- 176
Query: 171 TVAANKQAIENNKAALATQRAQLEAAQLELSAQLTTVQNEKASLIQAKAQAEEAARKAAE 230
+K+ I+ +A+L + +L AQ EL L Q+ +L +A+ E A +
Sbjct: 177 ----DKKTIDEKEASLVVDKQKLAKAQAELQDNLKKRQD---NLQTVQAKYNEVASQLNL 229
Query: 231 AQAAAEAKAQAEAKAQAESVAK 252
A A +AK ++ KA E++A+
Sbjct: 230 A-AEEKAKIESNMKAVQETIAR 250
Database: nr
Posted date: Aug 11, 2003 9:58 AM
Number of letters in database: 479,114,161
Number of sequences in database: 1,487,057
Lambda K H
0.304 0.116 0.301
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 314,235,050
Number of Sequences: 1487057
Number of extensions: 11276776
Number of successful extensions: 116317
Number of sequences better than 1.0e-04: 731
Number of HSP's better than 0.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 704
Number of HSP's that attempted gapping in prelim test: 106384
Number of HSP's gapped (non-prelim): 3389
length of query: 447
length of database: 479,114,161
effective HSP length: 127
effective length of query: 320
effective length of database: 290,257,922
effective search space: 92882535040
effective search space used: 92882535040
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 118 (50.1 bits)