15 proteins |
R | COG2118 | DNA-binding protein | Help | |
---|---|---|---|---|---|
1 from | query genome Thermoplasma acidophilum (Thermoplasmatales | Thermoplasmata) | ||||
![]() | Ta0052 |
124 letters 0
0 610 = |||Ta0052 (124) = 0
0 511 = |||TVN0008 (124) = -12
-2 229 = |MTH1615 (111) = -4
3 225 = SSO0352 (118) = -9
-2 222 = |AF2068 (111) = -10
1 210 = |MK1619 (117) = -5
-2 208 = |MA4116 (122) = -7
-2 205 = APE1088a (115) = -13
-2 204 = |MJ0691 (109) = -8
-3 190 = |PAB0620 (115) = 308
229 92 |MA0627 (656) 122
-51 83 YNL061w_1 (195) 29
294 80 alr2338_1 (449) 140
80 79 BBQ47 (345) 89
156 78 _ HI0383 (372) COG3064 83
609 76 _ ECs4049 (890) COG0532 292
206 76 ECU08g0030 (619) 292
206 76 ECU01g1510 (619) 292
206 76 ECU01g0100 (619) -11
82 76 VCA0171_3 (205) 70
-1 75 TP0470_2 (195) 140
136 73 BBL40 (378) 20
13 73 HP0528_2 (157) 21
78 72 BH2836 (239) 222
43 71 _ VC2370_1 (391) COG2202 20
13 70 jhp0477_2 (157) 126
748 67 _ YDR283c_1 (1000) COG0515 173
98 67 YAL035w_1 (398) 283
-41 66 _ sll1672_1 (366) COG3447 707
-78 66 _ YPL009c_1 (753) COG1293 496
-38 60 _ |MJ1505_1 (580) COG1111 -7
222 59 _ lin2629_2 (341) COG3595 -23
181 58 _ slr1147_2 (282) COG0642
BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ta0052 (124 letters) Database: myva 192,987 sequences; 59,019,183 total letters Score E Sequences producing significant alignments: (bits) Value Ta0052 239 7e-64 TVN0008 201 2e-52 MTH1615 93 1e-19 SSO0352 91 3e-19 AF2068 90 7e-19 MK1619 86 2e-17 MA4116 85 3e-17 APE1088a 84 7e-17 MJ0691 83 9e-17 PAB0620 78 4e-15 MA0627 40 8e-04 YNL061w_1 37 0.009 alr2338_1 35 0.021 BBQ47 35 0.027 HI0383 35 0.035 ECs4049 34 0.060 ECU08g0030 34 0.060 ECU01g1510 34 0.060 ECU01g0100 34 0.060 VCA0171_3 34 0.060 TP0470_2 33 0.079 BBL40 33 0.13 HP0528_2 33 0.13 BH2836 32 0.18 VC2370_1 32 0.23 jhp0477_2 32 0.30 YDR283c_1 30 0.67 YAL035w_1 30 0.67 sll1672_1 30 0.87 YPL009c_1 30 0.87 MJ1505_1 28 4.3 lin2629_2 27 5.6 slr1147_2 27 7.4 # >Ta0052 # Length = 124 # # Score = 239 bits (610), Expect = 7e-64 # Identities = 124/124 (100%), Positives = 124/124 (100%) # # Query: 1 MASHPKVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILD 60 # MASHPKVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILD # Sbjct: 1 MASHPKVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILD 60 # # Query: 61 PSARERLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIE 120 # PSARERLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIE # Sbjct: 61 PSARERLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIE 120 # # Query: 121 RRSK 124 # RRSK # Sbjct: 121 RRSK 124 # # # >TVN0008 # Length = 124 # # Score = 201 bits (511), Expect = 2e-52 # Identities = 103/124 (83%), Positives = 113/124 (91%) # # Query: 1 MASHPKVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILD 60 # M + KV+ M DDEELE+IRR+Q+E +QRQAMQ QM EE+EKQRE E+ARRQQILRQILD # Sbjct: 1 MRNSYKVIEMSDDEELEKIRRRQMEELQRQAMQRQMAEEEEKQREIEKARRQQILRQILD 60 # # Query: 61 PSARERLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIE 120 # PSARERLNNVRLVRPDLADNVENQLIQLASMGRINR++ E DIIDILSKLTENKREPKIE # Sbjct: 61 PSARERLNNVRLVRPDLADNVENQLIQLASMGRINRIIKESDIIDILSKLTENKREPKIE 120 # # Query: 121 RRSK 124 # RRSK # Sbjct: 121 RRSK 124 # # # >MTH1615 # Length = 111 # # Score = 92.8 bits (229), Expect = 1e-19 # Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 1/109 (0%) # # Query: 15 ELERIRRQQLESMQRQAMQEQMREE-QEKQREAERARRQQILRQILDPSARERLNNVRLV 73 # +LE IRR+++ +Q++A Q+ M E QE+ R+ +++QI+ QIL P AR RL N+RL # Sbjct: 3 DLEEIRRKKMLELQQKAQQQAMEAEAQEQMRQQLEMQKKQIMMQILTPEARSRLANLRLT 62 # # Query: 74 RPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIERR 122 # RPD + +E QLIQLA MGR+ +++ + ++L ++ KRE KI R+ # Sbjct: 63 RPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKRVAGKKREIKISRK 111 # # # >SSO0352 # Length = 118 # # Score = 91.3 bits (225), Expect = 3e-19 # Identities = 50/115 (43%), Positives = 82/115 (70%), Gaps = 9/115 (7%) # # Query: 12 DDEELERIRRQQLESMQRQAMQEQMREEQEKQREAE-RARRQQILRQILDPSARERLNNV 70 # DDEELE E ++R+A QEQ R E+E++R+AE ++++ ILR IL P AR+RL N+ # Sbjct: 8 DDEELE-------ELLRRKAAQEQKRIEEERKRKAELESQKESILRVILTPEARQRLTNI 60 # # Query: 71 RLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLT-ENKREPKIERRSK 124 # +LV+P+ A+++ENQLI LA GRI +++ ++ IL +++ +N+R+ KI+ R + # Sbjct: 61 KLVKPEFAESLENQLIALAQSGRIKIPITDEELKQILEQISQQNRRDFKIQIRER 115 # # # >AF2068 # Length = 111 # # Score = 90.1 bits (222), Expect = 7e-19 # Identities = 46/109 (42%), Positives = 79/109 (72%), Gaps = 2/109 (1%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARERLNNVRLV 73 # ++LE IRR++L +QRQ E++++E E +R+ E A+++ ILR IL+P A+ERL+ ++L # Sbjct: 5 DDLEEIRRRKLMELQRQKELEELQKE-EMRRQVE-AQKKAILRAILEPEAKERLSRLKLA 62 # # Query: 74 RPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIERR 122 # P++A+ VENQLI LA GRI ++++ +++IL ++ KRE +I R+ # Sbjct: 63 HPEIAEAVENQLIYLAQAGRIQSKITDKMLVEILKRVQPKKRETRIIRK 111 # # # >MK1619 # Length = 117 # # Score = 85.5 bits (210), Expect = 2e-17 # Identities = 46/106 (43%), Positives = 70/106 (65%), Gaps = 2/106 (1%) # # Query: 13 DEELERIRRQQLESMQR--QAMQEQMREEQEKQREAERARRQQILRQILDPSARERLNNV 70 # D ELERIRR+++ +QR + QE+ EE+ +++ E A+R+ +LR+IL P ARERL V # Sbjct: 3 DPELERIRRKKIMELQRKLEESQEKKVEEEREKKALEEAQRRAMLRRILTPEARERLARV 62 # # Query: 71 RLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKRE 116 # RL RP LA VEN L+QLA G++ + E + IL ++++ R+ # Sbjct: 63 RLARPQLAQAVENYLLQLAQTGQLKEKIDEDQLKRILKQVSDATRK 108 # # # >MA4116 # Length = 122 # # Score = 84.7 bits (208), Expect = 3e-17 # Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 5/114 (4%) # # Query: 13 DEELERIRRQQLESMQRQAMQEQMRE-----EQEKQREAERARRQQILRQILDPSARERL 67 # D+ELE IR+++L +QRQ Q+Q + +QE+ R A++Q ILRQIL P ARERL # Sbjct: 8 DDELEEIRKRRLAEIQRQQAQQQPSDVQAAYQQEQARAEMEAQKQAILRQILTPEARERL 67 # # Query: 68 NNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIER 121 # +++ RP L + +E QLI LA GR+ + + + +L ++ KR+ I R # Sbjct: 68 TTLKMSRPALGEQLEMQLISLAQSGRLKAQIDDEQLKTLLMRMQPKKRKTSITR 121 # # # >APE1088a # Length = 115 # # Score = 83.6 bits (205), Expect = 7e-17 # Identities = 47/118 (39%), Positives = 77/118 (64%), Gaps = 6/118 (5%) # # Query: 8 MHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARERL 67 # M + D+ELE IRR+++ +QR+ +E+ REE++ + RA++ ILR++L ARERL # Sbjct: 1 MSYEYDDELEEIRRRKMLELQRRLEEERRREEEQARL---RAQKDAILRRLLTSKARERL 57 # # Query: 68 NNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKR---EPKIERR 122 # N+RLVRP++A+ EN +IQL GRI + + ++ IL +L + R E +I+R+ # Sbjct: 58 ANLRLVRPEIAEAAENAVIQLVQTGRITPPVDDDTLVQILLELDRSTRRDFEIRIKRK 115 # # # >MJ0691 # Length = 109 # # Score = 83.2 bits (204), Expect = 9e-17 # Identities = 46/111 (41%), Positives = 75/111 (67%), Gaps = 6/111 (5%) # # Query: 15 ELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARERLNNVRLVR 74 # ++E I+R++L +Q++ ++Q +EE + E ++ + +LR+IL P ARERL +RL R # Sbjct: 2 DVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQK---RALLRKILTPEARERLERIRLAR 58 # # Query: 75 PDLADNVENQLIQLASMGRINRMLSERD---IIDILSKLTENKREPKIERR 122 # P+ A+ VE QLIQLA +GR+ LS+ D +++ +S LT+ KRE KI R+ # Sbjct: 59 PEFAEAVEVQLIQLAQLGRLPIPLSDEDFKALLERISALTKRKREIKIVRK 109 # # # >PAB0620 # Length = 115 # # Score = 77.8 bits (190), Expect = 4e-15 # Identities = 45/109 (41%), Positives = 73/109 (66%), Gaps = 2/109 (1%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQEKQREAE-RARRQQILRQILDPSARERLNNVRL 72 # E++E IRR++L +QR+ +++Q +E+E +++A A+ Q ILR+IL P ARERL VRL # Sbjct: 6 EDIEEIRRRKLLELQRKYLEQQKAQEEEARQQALIEAQIQAILRKILTPEARERLARVRL 65 # # Query: 73 VRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKL-TENKREPKIE 120 # VRP+LA VE L+QL G+I + + + IL+++ +RE +I+ # Sbjct: 66 VRPELARQVELILVQLYQAGQITERIDDAKLKKILAQIEARTRREFRIK 114 # # # >MA0627 # Length = 656 # # Score = 40.0 bits (92), Expect = 8e-04 # Identities = 31/116 (26%), Positives = 58/116 (49%), Gaps = 19/116 (16%) # # Query: 13 DEELERIRRQQLES-------MQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARE 65 # +E+L ++ +QQ+E +R A E+ R E E+Q EAER R Q+ ++ + +E # Sbjct: 321 EEKLSQLEKQQMEKEKQAKAERERLAQLERERIEAERQAEAERKRLAQLESELQEARRQE 380 # # Query: 66 RLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIER 121 # V +E +L ++ + I R ER ++ + + TE +R+ ++ER # Sbjct: 381 ETERV--------TRLEKELKEVQAQEEIRR---ER-LVQLERECTEARRQAEVER 424 # # # # Score = 30.0 bits (66), Expect = 0.87 # Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 18/104 (17%) # # Query: 17 ERIRRQQLESMQRQAMQEQMREEQEK----QREAERA---RRQQILRQILDPSARERLNN 69 # E IRR++L ++R+ + + + E E+ Q E+ER RR ++ R+ L RER # Sbjct: 399 EEIRRERLVQLERECTEARRQAEVEREGLAQLESERTEVERRAEVERERLAQLERERTEV 458 # # Query: 70 VRLVR------PDL--ADNVE-NQLIQLA--SMGRINRMLSERD 102 # R V PD A+ ++ ++++ A +GRI+ ++ + D # Sbjct: 459 ERRVEAAGKEIPDFLSANTIKTDRVVNTAGEDLGRIDELMIDLD 502 # # # >YNL061w_1 # Length = 195 # # Score = 36.6 bits (83), Expect = 0.009 # Identities = 17/65 (26%), Positives = 32/65 (49%) # # Query: 3 SHPKVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPS 62 # +HP DD+ +LE + Q +E++ ++ +E+ E +E + E A Q IL # Sbjct: 125 AHPIFSDDDDEADLEELNAQNMEALSKKLDEEEAEEAEEAEMELVEAENMQPRADILPTE 184 # # Query: 63 ARERL 67 # +E + # Sbjct: 185 EQEEM 189 # # # >alr2338_1 # Length = 449 # # Score = 35.4 bits (80), Expect = 0.021 # Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%) # # Query: 17 ERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQIL-RQILDPSARERLNNVRLVRP 75 # E I++ Q E + +Q+ EE+E +E R QQ+L RQ+ + A+ + ++ # Sbjct: 46 EEIKKLQTEKDRLTDEVQQLIEEKEHLQEVRRITEQQVLIRQLSEALAKHICSQLQSSLA 105 # # Query: 76 DLADNVENQLIQLASMGRINRMLSERDIID-ILSKLTEN 113 # +A+ E+Q+ L S I + + ++ +L L +N # Sbjct: 106 KIANQTESQIAALKSAQSIGPAIENNEQVEKMLGSLDDN 144 # # # >BBQ47 # Length = 345 # # Score = 35.0 bits (79), Expect = 0.027 # Identities = 17/45 (37%), Positives = 33/45 (72%), Gaps = 3/45 (6%) # # Query: 11 DDDEELERIRRQQLESMQ--RQAMQEQMREEQEKQREAERARRQQ 53 # +D EE+E+ ++Q++E Q +Q +E+ R++QE+Q E +R R++Q # Sbjct: 151 EDKEEIEK-QKQEVEKAQERKQRQEEKKRKKQEQQEEKKRKRQEQ 194 # # # # Score = 29.3 bits (64), Expect = 1.5 # Identities = 11/36 (30%), Positives = 25/36 (68%) # # Query: 17 ERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQ 52 # ER +RQ+ + ++Q QE+ + ++++QR+ RA+ + # Sbjct: 168 ERKQRQEEKKRKKQEQQEEKKRKRQEQRKERRAKNK 203 # # # # Score = 27.7 bits (60), Expect = 4.3 # Identities = 16/72 (22%), Positives = 38/72 (52%), Gaps = 7/72 (9%) # # Query: 11 DDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARERLNNV 70 # ++DE+ E I +Q+ E + QE+ + ++EK+R+ + + ++ ++ R N + # Sbjct: 148 EEDEDKEEIEKQKQEV---EKAQERKQRQEEKKRKKQEQQEEKKRKRQEQRKERRAKNKI 204 # # Query: 71 RLVRPDLADNVE 82 # + LAD ++ # Sbjct: 205 K----KLADKID 212 # # # >HI0383 # Length = 372 # # Score = 34.7 bits (78), Expect = 0.035 # Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 3/51 (5%) # # Query: 6 KVMHMDDDEELERIRRQQLESMQRQA--MQEQMREEQ-EKQREAERARRQQ 53 # ++ H + + E ++RQQ + Q++ QEQ R+E EKQ++AE A+ +Q # Sbjct: 95 EIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQEALEKQKQAEEAKAKQ 145 # # # # Score = 30.0 bits (66), Expect = 0.87 # Identities = 12/45 (26%), Positives = 28/45 (61%) # # Query: 13 DEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQ 57 # +E+ +++++ Q QE+++ +QE+QR+ E ++Q+ RQ # Sbjct: 85 EEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQ 129 # # # # Score = 26.6 bits (57), Expect = 9.6 # Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%) # # Query: 17 ERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSAR 64 # E+ R+Q+++ Q QA QE + E+Q++ EA+ + + + D A+ # Sbjct: 113 EQQRQQEIKKQQEQARQEAL-EKQKQAEEAKAKQAAEAAKLKADAEAK 159 # # # # Score = 26.6 bits (57), Expect = 9.6 # Identities = 12/34 (35%), Positives = 21/34 (61%) # # Query: 24 LESMQRQAMQEQMREEQEKQREAERARRQQILRQ 57 # +E + QE+++ +QE QR+ E R+Q+ RQ # Sbjct: 84 VEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQ 117 # # # >ECs4049 # Length = 890 # # Score = 33.9 bits (76), Expect = 0.060 # Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 19/119 (15%) # # Query: 12 DDEELERI------RRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARE 65 # D +E ER+ +R+ E +R+A + RE Q+K AER +Q R+ + + RE # Sbjct: 95 DPQEAERLAAEEQAQREAEEQARREAEESAKREAQQK---AEREAAEQAKREAAEQAKRE 151 # # Query: 66 RLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIERRSK 124 # D V NQ + + + E++ ++ K E R K+E ++ # Sbjct: 152 AAEK---------DKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARR-KLEEEAR 200 # # # # Score = 29.6 bits (65), Expect = 1.1 # Identities = 21/56 (37%), Positives = 32/56 (56%), Gaps = 6/56 (10%) # # Query: 2 ASHPKVMHMDDD----EELERIRRQQ-LESMQRQAMQEQMRE-EQEKQREAERARR 51 # A KV + DD + E+ RR+Q ++R+A +E R+ E+E +R AE ARR # Sbjct: 153 AEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARR 208 # # # >ECU08g0030 # Length = 619 # # Score = 33.9 bits (76), Expect = 0.060 # Identities = 17/55 (30%), Positives = 32/55 (57%), Gaps = 3/55 (5%) # # Query: 12 DDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARER 66 # DDE + R E +R+ ++E E+ K+RE ERA+ ++ L ++++ RE+ # Sbjct: 304 DDESINNAVR---EVRERKRLEEMREMEERKRREEERAKNEEELLRMVEREEREK 355 # # # >ECU01g1510 # Length = 619 # # Score = 33.9 bits (76), Expect = 0.060 # Identities = 17/55 (30%), Positives = 32/55 (57%), Gaps = 3/55 (5%) # # Query: 12 DDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARER 66 # DDE + R E +R+ ++E E+ K+RE ERA+ ++ L ++++ RE+ # Sbjct: 304 DDESINNAVR---EVRERKRLEEMREMEERKRREEERAKNEEELLRMVEREEREK 355 # # # >ECU01g0100 # Length = 619 # # Score = 33.9 bits (76), Expect = 0.060 # Identities = 17/55 (30%), Positives = 32/55 (57%), Gaps = 3/55 (5%) # # Query: 12 DDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSARER 66 # DDE + R E +R+ ++E E+ K+RE ERA+ ++ L ++++ RE+ # Sbjct: 304 DDESINNAVR---EVRERKRLEEMREMEERKRREEERAKNEEELLRMVEREEREK 355 # # # >VCA0171_3 # Length = 205 # # Score = 33.9 bits (76), Expect = 0.060 # Identities = 13/50 (26%), Positives = 35/50 (70%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDPSA 63 # ++ ++ ++QQ + Q+Q Q+Q +++Q++Q++ ++ ++QQ +Q D S+ # Sbjct: 3 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQDSSS 52 # # # # Score = 28.5 bits (62), Expect = 2.5 # Identities = 9/47 (19%), Positives = 29/47 (61%) # # Query: 2 ASHPKVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAER 48 # A+ + ++ ++ ++QQ + Q+Q Q+Q +++Q++Q++ ++ # Sbjct: 1 AAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 47 # # # # Score = 28.1 bits (61), Expect = 3.3 # Identities = 9/47 (19%), Positives = 28/47 (59%) # # Query: 2 ASHPKVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAER 48 # A + ++ ++ ++QQ + Q+Q Q+Q +++Q++Q++ ++ # Sbjct: 2 AQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 48 # # # # Score = 27.3 bits (59), Expect = 5.6 # Identities = 10/40 (25%), Positives = 26/40 (65%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQ 53 # ++ ++ ++QQ + Q+Q Q+Q +++Q++Q + A Q+ # Sbjct: 19 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQDSSSGASGQE 58 # # # # Score = 26.9 bits (58), Expect = 7.4 # Identities = 9/32 (28%), Positives = 24/32 (74%) # # Query: 26 SMQRQAMQEQMREEQEKQREAERARRQQILRQ 57 # + Q+Q Q+Q +++Q++Q++ ++ ++QQ +Q # Sbjct: 2 AQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 33 # # # >TP0470_2 # Length = 195 # # Score = 33.5 bits (75), Expect = 0.079 # Identities = 22/91 (24%), Positives = 41/91 (44%), Gaps = 2/91 (2%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQE--KQREAERARRQQILRQILDPSARERLNNVR 71 # +E E RR++ E +R+ +E R+E E +++EAE ARR++ + R # Sbjct: 84 KEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAE 143 # # Query: 72 LVRPDLADNVENQLIQLASMGRINRMLSERD 102 # R A+ + + ++ R R+ D # Sbjct: 144 EARRKEAEEARRKEAEFEALKRALRLKQAED 174 # # # # Score = 32.7 bits (73), Expect = 0.13 # Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQE--KQREAERARRQQ 53 # +E E RR++ E +R+ +E R+E E +++EAE ARR++ # Sbjct: 52 KEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKE 93 # # # # Score = 32.7 bits (73), Expect = 0.13 # Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQE--KQREAERARRQQ 53 # +E E RR++ E +R+ +E R+E E +++EAE ARR++ # Sbjct: 20 KEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKE 61 # # # # Score = 32.7 bits (73), Expect = 0.13 # Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQE--KQREAERARRQQ 53 # +E E RR++ E +R+ +E R+E E +++EAE ARR++ # Sbjct: 76 KEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKE 117 # # # # Score = 32.7 bits (73), Expect = 0.13 # Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQE--KQREAERARRQQ 53 # +E E RR++ E +R+ +E R+E E +++EAE ARR++ # Sbjct: 44 KEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKE 85 # # # # Score = 32.7 bits (73), Expect = 0.13 # Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQE--KQREAERARRQQ 53 # +E E RR++ E +R+ +E R+E E +++EAE ARR++ # Sbjct: 36 KEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKE 77 # # # # Score = 32.7 bits (73), Expect = 0.13 # Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQE--KQREAERARRQQ 53 # +E E RR++ E +R+ +E R+E E +++EAE ARR++ # Sbjct: 60 KEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKE 101 # # # # Score = 26.6 bits (57), Expect = 9.6 # Identities = 15/41 (36%), Positives = 26/41 (62%), Gaps = 2/41 (4%) # # Query: 15 ELERIRRQQLESMQRQAMQEQMREEQEKQR--EAERARRQQ 53 # E++R+ + +QR+ +E R+E E+ R EAE ARR++ # Sbjct: 5 EVQRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKE 45 # # # >BBL40 # Length = 378 # # Score = 32.7 bits (73), Expect = 0.13 # Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 6/95 (6%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMR--EEQEKQREAERARRQQILRQILDPSARERLNNVR 71 # EE ++ R+ + E +R+ QE+ + EEQE++ +AE+ +++ RQ + + + R # Sbjct: 154 EEEQQKRKAEQEKQKREEEQERQKREEEQERKAKAEKEAKEKAERQKQEEQQKRKAEKER 213 # # Query: 72 LVRPDLAD--NVENQLIQLASMGRINRMLSERDII 104 # + A+ V+N++ L G+I+ + D+I # Sbjct: 214 EEQRKEAEKRQVDNEIRTLT--GKIDEINRNIDVI 246 # # # # Score = 31.2 bits (69), Expect = 0.39 # Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%) # # Query: 11 DDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAER--ARRQQILRQI 58 # ++ E + ++ E +RQ +EQ + + EK+RE +R A ++Q+ +I # Sbjct: 180 EEQERKAKAEKEAKEKAERQKQEEQQKRKAEKEREEQRKEAEKRQVDNEI 229 # # # # Score = 30.4 bits (67), Expect = 0.67 # Identities = 13/58 (22%), Positives = 35/58 (59%), Gaps = 3/58 (5%) # # Query: 12 DDEELERIRRQQLESMQRQAMQEQMREEQEKQ---REAERARRQQILRQILDPSARER 66 # ++ + + +Q+ E +R+A QE+ + E+E++ RE E+ R+ + ++ + + R++ # Sbjct: 143 EERNKQELAKQEEEQQKRKAEQEKQKREEEQERQKREEEQERKAKAEKEAKEKAERQK 200 # # # # Score = 26.6 bits (57), Expect = 9.6 # Identities = 11/48 (22%), Positives = 27/48 (55%) # # Query: 6 KVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQ 53 # KV + E + +++ E +Q + +Q E+Q+++ E E+ +R++ # Sbjct: 124 KVEESEAKVEGKEEKQENTEERNKQELAKQEEEQQKRKAEQEKQKREE 171 # # # >HP0528_2 # Length = 157 # # Score = 32.7 bits (73), Expect = 0.13 # Identities = 25/120 (20%), Positives = 64/120 (52%), Gaps = 4/120 (3%) # # Query: 7 VMHMDDDEELERIRRQ-QLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDP-SAR 64 # ++ D +ELE ++ + E ++ Q+ ++++EK++E ERA+ + L + + S # Sbjct: 27 IVDAPDPKELEEQKKALEKEKEAKEQAQKAQKDKREKRKE-ERAKNRANLENLTNAMSNP 85 # # Query: 65 ERLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIERRSK 124 # + L+N + + + EN+L Q+ + + ++ + + + +L + + E I++R+K # Sbjct: 86 QNLSNNKNLSEFIKQQRENELDQMERLEDMQEQ-AQANALKQIEELNKKQAEETIKQRAK 144 # # # >BH2836 # Length = 239 # # Score = 32.3 bits (72), Expect = 0.18 # Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 24/138 (17%) # # Query: 6 KVMHMDDDEELERIRRQQLESMQRQAMQEQMREEQE--------------------KQRE 45 # +V+H + + E RIR ++ E+ M +++++E E K+RE # Sbjct: 27 RVIHAEAELEKYRIRVKKYENDYYYGMIDELKQENEALSAQLSKYERLEELVTEMTKERE 86 # # Query: 46 AERARRQQILRQILDPSARERLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIID 105 # RA ++ Q+ + ARE++ V V + ++V+ + I+ A E + ++ # Sbjct: 87 RLRATIVELEEQLENMQAREKVAEVESVE-ERVEDVQQEAIEDAGQ---EEKSHEGEAVE 142 # # Query: 106 ILSKLTENKREPKIERRS 123 # + E K EP+++ + # Sbjct: 143 STEGVKEQKVEPQLDNET 160 # # # >VC2370_1 # Length = 391 # # Score = 32.0 bits (71), Expect = 0.23 # Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%) # # Query: 32 MQEQMREEQEKQREAE--RARRQQILRQILDPS 62 # MQ Q+REE EK+R+ E A+R IL+ IL+ S # Sbjct: 254 MQRQLREEMEKRRDTEVALAQRDTILQNILESS 286 # # # >jhp0477_2 # Length = 157 # # Score = 31.6 bits (70), Expect = 0.30 # Identities = 24/120 (20%), Positives = 63/120 (52%), Gaps = 4/120 (3%) # # Query: 7 VMHMDDDEELERIRRQ-QLESMQRQAMQEQMREEQEKQREAERARRQQILRQILDP-SAR 64 # ++ D +ELE ++ + E ++ Q+ ++++EK++E ERA+ + L + + S # Sbjct: 27 IVDAPDPKELEEQKKALEKEKEAKEQAQKAQKDKREKRKE-ERAKNRANLENLTNAMSNP 85 # # Query: 65 ERLNNVRLVRPDLADNVENQLIQLASMGRINRMLSERDIIDILSKLTENKREPKIERRSK 124 # + L+N + + + EN+L Q+ + + ++ + + + +L + + E + +R+K # Sbjct: 86 QNLSNNKNLSELIKQQRENELDQMERLEDMQEQ-AQANALKQIEELNKKQAEEAVRQRAK 144 # # # >YDR283c_1 # Length = 1000 # # Score = 30.4 bits (67), Expect = 0.67 # Identities = 12/45 (26%), Positives = 30/45 (66%), Gaps = 2/45 (4%) # # Query: 12 DDEELERIR--RQQLESMQRQAMQEQMREEQEKQREAERARRQQI 54 # +D+ L+RI+ ++QLE +R+ QE +++ ++QR + ++++ # Sbjct: 138 EDDRLQRIKETKEQLEKEEREKQQETIKKRSDEQRRIDEIVQREL 182 # # # >YAL035w_1 # Length = 398 # # Score = 30.4 bits (67), Expect = 0.67 # Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 3/47 (6%) # # Query: 10 MDDDEELERIRRQQLESMQ--RQAMQEQMREE-QEKQREAERARRQQ 53 # +++ E+LER ++LE + R A +E+M+EE + ++E E+A+R++ # Sbjct: 183 LEEQEKLEREEEERLEKEEEERLANEEKMKEEAKAAKKEKEKAKREK 229 # # # >sll1672_1 # Length = 366 # # Score = 30.0 bits (66), Expect = 0.87 # Identities = 17/41 (41%), Positives = 24/41 (58%) # # Query: 15 ELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQIL 55 # E ER + Q + Q Q Q +E +QRE ERA+R++IL # Sbjct: 298 ENERSKNQLFTTNQILIEQNQKLQELYQQRELERAQREKIL 338 # # # >YPL009c_1 # Length = 753 # # Score = 30.0 bits (66), Expect = 0.87 # Identities = 12/35 (34%), Positives = 22/35 (62%) # # Query: 11 DDDEELERIRRQQLESMQRQAMQEQMREEQEKQRE 45 # DD+EE E ++ E + + +E+ +EE+EK+ E # Sbjct: 718 DDEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEE 752 # # # # Score = 28.1 bits (61), Expect = 3.3 # Identities = 14/43 (32%), Positives = 23/43 (52%), Gaps = 6/43 (13%) # # Query: 11 DDDEELERIRRQQLESMQRQAMQEQMREEQEKQREAERARRQQ 53 # DDDEE E E + + +E+ EE+E+++E E +Q # Sbjct: 717 DDDEEEEE------EEEEEEEEEEEEEEEEEEEKEEEEKEEEQ 753 # # # >MJ1505_1 # Length = 580 # # Score = 27.7 bits (60), Expect = 4.3 # Identities = 12/32 (37%), Positives = 24/32 (74%), Gaps = 2/32 (6%) # # Query: 14 EELERIRRQQLESMQRQAMQEQMREEQEKQRE 45 # EE E I+ +++ES + A++E+ +EE+EK ++ # Sbjct: 510 EETEEIKEKEIES--KTAVKEETKEEEEKTKK 539 # # # >lin2629_2 # Length = 341 # # Score = 27.3 bits (59), Expect = 5.6 # Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%) # # Query: 12 DDEELERIRRQQLESMQRQAMQEQMREE-QEKQREAERARRQQILR-QILDPSARERLNN 69 # ++E LER RR+ E +R A + + R+E +E R + RQ+ +R + + AR + # Sbjct: 5 NEEVLERHRRRVDEKRRRHADRNEARQEVREAMRNSRHHNRQKPVRPEPIHHGARRKEAR 64 # # Query: 70 VRLVR 74 # R VR # Sbjct: 65 PRPVR 69 # # # >slr1147_2 # Length = 282 # # Score = 26.9 bits (58), Expect = 7.4 # Identities = 16/60 (26%), Positives = 29/60 (47%) # # Query: 28 QRQAMQEQMREEQEKQREAERARRQQILRQILDPSARERLNNVRLVRPDLADNVENQLIQ 87 # Q+Q Q EEQ +Q + ER +L Q+ +P + + L++ DN Q+++ # Sbjct: 5 QQQDWYRQAWEEQNQQYQWERQHWADLLHQLRNPLTALKTFSKLLLKRWHGDNKSQQVVE 64 # # Database: myva Posted date: Sep 17, 2002 10:27 AM Number of letters in database: 59,019,183 Number of sequences in database: 192,987 Lambda K H 0.316 0.130 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,316,993 Number of Sequences: 192987 Number of extensions: 368287 Number of successful extensions: 4510 Number of sequences better than 10.0: 371 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 189 Number of HSP's that attempted gapping in prelim test: 3252 Number of HSP's gapped (non-prelim): 887 length of query: 124 length of database: 59,019,183 effective HSP length: 100 effective length of query: 24 effective length of database: 39,720,483 effective search space: 953291592 effective search space used: 953291592 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 57 (26.6 bits) S2: 57 (26.6 bits)