Speedy homolog A (Xenopus laevis) (Spdya)

Restricted Expression:

testis [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

brain; eye; testis; mixed; inner ear

NCBI

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Finding cDNAs

UGID:387917 UniGene Rn.19576 Rattus norvegicus (Norway rat) Spdya

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Speedy homolog A (Xenopus laevis) (Spdya)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_620210.1	speedy homolog A	R. norvegicus	100.0	311
XP_001481231.1	PREDICTED: spermatogenesis related protein Gs4	M. musculus	95.5	309
NP_001136106.1	speedy homolog A isoform 1	H. sapiens	93.3	312
NP_001006091.1	speedy 1	D. rerio	72.0	275
NP_001081714.1	p33 ringo	X. laevis	56.3	279

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	6
Map position:	6q13
UniSTS entry:		RH138243
UniSTS entry:		(n/a)
UniSTS entry:		RH133497

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AF492385.1	Rattus norvegicus GS4 mRNA, complete cds	PA
NM_138855.1	Rattus norvegicus speedy homolog A (Xenopus laevis) (Spdya), mRNA	PA
BC078729.1	Rattus norvegicus speedy homolog A (Drosophila), mRNA (cDNA clone MGC:93178 IMAGE:7134092), complete cds	PA

EST sequences (15)

AI071025.1	Clone UI-R-C1-ln-e-06-0-UI	mixed	3' read	A
AI101556.1	Clone RBRBS23	brain	3' read	A
AW526793.1	Clone UI-R-BO1-aje-b-02-0-UI	brain	3' read	A
AW529523.1	Clone UI-R-BT1-akl-c-05-0-UI	mixed	3' read	A
BF563673.1	Clone UI-R-BT1-akl-c-05-0-UI	mixed	5' read
BG374544.1	Clone UI-R-CV1-bsr-f-05-0-UI	eye	3' read	A
BI298558.1	Clone UI-R-CV2-chk-g-10-0-UI	eye	3' read	A
BI301099.1	Clone UI-R-CV2-cgm-h-03-0-UI	eye	3' read	A
CB705218.1	Clone nrhy4-00137-c11	brain	5' read
CK596198.1	Clone IMAGE:7133907	testis	5' read	P
CK603504.1	Clone IMAGE:7134465	testis	5' read	P
CK603924.1	Clone IMAGE:7134092	testis	5' read	P
CK595279.1	Clone IMAGE:7112687	testis	5' read	P
CX570410.1		inner ear	5' read
DY317229.1	Clone IMAGE:8371140	brain	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria