WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract
RepeatMasker repeats found in sequence:No Repeats Found.Reference: Gish, Warren (1994-1997). unpublished. Gish, Warren and David J. States (1993). Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-72.Notice: statistical significance is estimated under the assumption that the equivalent of one entire reading frame in the query sequence codes for protein and that significant alignments will involve only coding reading frames.
Query= SSH6F08.SEQ(1>485) (457 letters)
Translating both strands of query sequence in all 6 reading framesDatabase: nr 505,245 sequences; 158,518,215 total letters.Observed Numbers of Database Sequences Satisfying Various EXPECTation Thresholds (E parameter values) Histogram units: = 4 Sequences : less than 4 sequences EXPECTation Threshold (E parameter) | V Observed Counts--> 10000 831 194 |================================================ 6310 637 110 |=========================== 3980 527 130 |================================ 2510 397 121 |============================== 1580 276 62 |=============== 1000 214 63 |=============== 631 151 44 |=========== 398 107 15 |=== 251 92 16 |==== 158 76 15 |=== 100 61 7 |= 63.1 54 0 | 39.8 54 4 |= 25.1 50 3 |: 15.8 47 3 |: >>>>>>>>>>>>>>>>>>>>> Expect = 10.0, Observed = 44 <<<<<<<<<<<<<<<<< 10.0 44 2 |: 6.31 42 0 | 3.98 42 1 |: 2.51 41 0 | 1.58 41 0 | 1.00 41 0 | 0.63 41 0 | 0.40 41 0 | 0.25 41 0 | 0.16 41 1 |: 0.10 40 0 | 0.063 40 2 |: 0.040 38 0 | 0.025 38 0 | 0.016 38 0 | 0.010 38 0 | 0.0063 38 0 | 0.0040 38 0 | 0.0025 38 1 |: Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N gi|4733959|gb|AAD28643.1|AC007294_2(AC007294) GIDA-li... +2 548 5.1e-52 1 gi|2494736|sp|Q55694|GIDA_SYNY3GLUCOSE INHIBITED DIVI... +2 297 1.4e-24 1 gi|7674053|sp|Q9WYA1|GIDA_THEMAGLUCOSE INHIBITED DIVI... +2 228 4.0e-17 1 gi|121187|sp|P25812|GIDA_BACSUGLUCOSE INHIBITED DIVIS... +2 225 8.4e-17 1 gi|121189|sp|P25756|GIDA_PSEPUGLUCOSE INHIBITED DIVIS... +2 204 1.5e-14 1 gi|7674051|sp|O84506|GIDA_CHLTRGLUCOSE INHIBITED DIVI... +2 202 2.4e-14 1 gi|2851497|sp|P17112|GIDA_ECOLIGLUCOSE INHIBITED DIVI... +2 200 4.1e-14 1 gi|7190812|gb|AAF39588.1|(AE002346) glucose inhibited... +2 184 5.3e-14 2 gi|1707903|sp|P53362|GIDA_BORBUGLUCOSE INHIBITED DIVI... +2 194 1.8e-13 1 gi|2494733|sp|P94613|GIDA_COXBUGLUCOSE INHIBITED DIVI... +2 194 1.8e-13 1 gi|7443701|pir||B70122glucose-inhibited division prot... +2 194 1.8e-13 1 gi|1169896|sp|P44763|GIDA_HAEINGLUCOSE INHIBITED DIVI... +2 190 4.9e-13 1 gi|43257|emb|CAA25773.1|(X01631) gidA protein [Escher... +2 189 6.3e-13 1 gi|7674055|sp|Q9Z7T7|GIDA_CHLPNGLUCOSE INHIBITED DIVI... +2 186 1.3e-12 1 gi|7225413|gb|AAF40650.1|(AE002376) glucose inhibited... +2 182 3.6e-12 1 gi|7378847|emb|CAB83390.1|(AL162752) glucose inhibite... +2 181 4.6e-12 1 gi|3913737|sp|O51879|GIDA_BUCAPGLUCOSE INHIBITED DIVI... +2 170 7.0e-11 1 gi|7471928|pir||D75569gidA protein - Deinococcus radi... +2 160 7.7e-10 1 gi|3913739|sp|O66962|GIDA_AQUAEGLUCOSE INHIBITED DIVI... +2 156 2.2e-09 1 gi|7657947|emb|CAB89205.1|(AJ277593) putative glucose... +2 150 9.0e-09 1 gi|7674054|sp|Q9XBF8|GIDA_CAUCRGLUCOSE INHIBITED DIVI... +2 149 1.2e-08 1 gi|5731953|emb|CAB52589.1|(AJ245515) glucose inhibite... +2 136 2.3e-08 1 gi|7109686|gb|AAF36757.1|(L35043) glucose inhibited d... +2 143 5.3e-08 1 gi|6016130|sp|O83084|GIDA_TREPAGLUCOSE INHIBITED DIVI... +2 128 8.4e-08 2 gi|94582|pir||S21554division protein gidA - Lyme dise... +2 128 1.6e-07 1 gi|6225445|sp|Q9ZE90|GIDA_RICPRGLUCOSE INHIBITED DIVI... +2 138 1.9e-07 1 gi|2119962|pir||I40083division protein - Lyme disease... +2 126 2.7e-07 1 gi|5672641|dbj|BAA82679.1|(AB013492) 77%-identity [Ba... +2 132 7.5e-07 1 gi|7674056|sp|Q9ZML9|GIDA_HELPJGLUCOSE INHIBITED DIVI... +2 131 1.1e-06 1 gi|2258459|gb|AAB63296.1|(AF008565) GidA [Helicobacte... +2 124 5.9e-06 1 gi|2494734|sp|P56138|GIDA_HELPYGLUCOSE INHIBITED DIVI... +2 121 1.2e-05 1 gi|6321202ref|NP_011278.1| Mto1p >gi|1723974|sp|P5307... +2 119 2.3e-05 1 gi|6912300ref|NP_036255.1| CGI-02 protein >gi|7674427... +2 117 3.3e-05 1 gi|6898986|gb|AAF30444.1|AE002103_9(AE002103) glucose... +2 115 5.4e-05 1 gi|7291427|gb|AAF46854.1|(AE003457) CG4610 gene produ... +2 112 0.00012 1 gi|1346131|sp|P47619|GIDA_MYCGEGLUCOSE INHIBITED DIVI... +2 108 0.00091 1 gi|2494735|sp|P75221|GIDA_MYCPNGLUCOSE INHIBITED DIVI... +2 108 0.00091 1 gi|3122147|sp|O32806|GIDA_LACLCGLUCOSE INHIBITED DIVI... +2 106 0.0025 1 gi|6968621|emb|CAB73442.1|(AL139077) glucose inhibite... +2 99 0.042 1 gi|2494737|sp|Q20680|YT32_CAEELHYPOTHETICAL 71.7 KD P... +2 99 0.043 1 gi|3915337|sp|O13670|Y079_SCHPOHYPOTHETICAL 74.2 KD P... +2 96 0.12 1 gi|3900934|emb|CAA10141.1|(AJ012715) Pet100 protein [... +2 62 0.96 1 gi|160045|gb|AAA63420.1|(M63819) malaria antigen [Pla... +2 59 0.9992 1 gi|1742415|dbj|BAA15130.1|(D90789) Outer membrane pro... +2 59 0.9992 1 Locally-aligned regions (HSPs) with respect to query sequence: Locus_ID Frame 2 Hits gi|4733959 |__________________________________________________ gi|2494736 |__________________________________________________ gi|7674053 | _________________________________________________ gi|121187 |__________________________________________________ gi|121189 |__________________________________________________ gi|7674051 |__________________________________________________ gi|2851497 |__________________________________________________ gi|7190812 | _____ _____________________________________ gi|1707903 |__________________________________________________ gi|2494733 |__________________________________________________ gi|7443701 |__________________________________________________ gi|1169896 |__________________________________________________ gi|43257 |__________________________________________________ gi|7674055 | _____________________________________ gi|7225413 |__________________________________________________ gi|7378847 |__________________________________________________ gi|3913737 |__________________________________________________ gi|7471928 | _________________________________________ gi|3913739 | ___________________________ gi|7657947 | ______________________________________________ gi|7674054 | __________________________ gi|5731953 |____________________________________________ gi|7109686 | _____________________________________ gi|6016130 | ______ __________________________ gi|94582 | ______________________ gi|6225445 |__________________________________________________ gi|2119962 | ______________________ gi|5672641 |___________________________________ gi|7674056 |__________________________________________________ gi|2258459 |__________________________________________________ gi|2494734 |__________________________________________________ gi|6321202 | __________________________ gi|6912300 | __________________________ gi|6898986 | _________________________________________ gi|7291427 | _____________________________ gi|1346131 | _______________________________________________ gi|2494735 | __________________________________________ gi|3122147 |____________________________ gi|6968621 | __________________________________________ gi|2494737 | _________________________________ gi|3915337 | _________________________ gi|3900934 | ___________________ gi|160045 | _____________________ gi|1742415 | ___________________ __________________________________________________ Query sequence: | | | | | 153 0 50 100 150
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>gi|4733959|gb|AAD28643.1|AC007294_2 (AC007294) GIDA-like protein [Arabidopsis thaliana] Length = 723 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | | | 723 0 150 300 450 600 Plus Strand HSPs: Score = 548 (192.9 bits), Expect = 5.1e-52, P = 5.1e-52 Identities = 108/151 (71%), Positives = 134/151 (88%), Frame = +2 Query: 5 QDKRARISEEKKRLKSVRISG--GDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDK 178 Q+K+ARISEEKKRLK+V+IS GDLAAEV+++S QPVK+ +TLESLLKKPHI Y++L+K Sbjct: 534 QEKQARISEEKKRLKTVKISVAVGDLAAEVSSVSSQPVKESATLESLLKKPHIHYKLLEK 593 Query: 179 HDFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEA 358 H FG+++LSRMEK+CVEIDIKYEGFI+RQQ+QLQQ+V +QHR LP+DLDYY+MTTLS E Sbjct: 594 HGFGNETLSRMEKDCVEIDIKYEGFIVRQQNQLQQMVHQQHRRLPDDLDYYSMTTLSHEG 653 Query: 359 REKLPKVRPQTIGQXAN*VGLSPADITALFL 451 REKL KVRP+TIGQ + G+SPADITAL + Sbjct: 654 REKLSKVRPETIGQASRVGGVSPADITALLI 684 >gi|2494736|sp|Q55694|GIDA_SYNY3 GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443706|pir||S76371 hypothetical protein - Synechocystis sp. (strain PCC 6803) >gi|1001595|dbj|BAA10223.1| (D64000) glucose inhibited division protein A [Synechocystis sp.] Length = 635 Frame 2 hits (HSPs): ____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 635 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 14..54 BLOCKS BL01280B: Glucose inhibited division pro 73..124 BLOCKS BL01280C: Glucose inhibited division pro 144..194 BLOCKS BL01280D: Glucose inhibited division pro 203..219 BLOCKS BL01280E: Glucose inhibited division pro 246..278 BLOCKS BL01280F: Glucose inhibited division pro 280..307 BLOCKS BL01280G: Glucose inhibited division pro 352..398 BLOCKS BL01280H: Glucose inhibited division pro 424..470 BLOCKS BL01280I: Glucose inhibited division pro 576..622 PFAM GIDA: Glucose inhibited division protein 13..629 PRODOM PD003738: GIDA(14) 13..625 PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 399..406 PROSITE GIDA_1: Glucose inhibited division prote 280..294 PROSITE GIDA_2: Glucose inhibited division prote 375..398 __________________ Plus Strand HSPs: Score = 297 (104.5 bits), Expect = 1.4e-24, P = 1.4e-24 Identities = 65/150 (43%), Positives = 93/150 (62%), Frame = +2 Query: 5 QDKRARISEEKKRLKSVRISGGD-LAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181 Q K+A I+ EK+RL S RI D + E+ + + Q +K L LL++P Y L+K Sbjct: 474 QTKQANITAEKERLYSTRIKEQDAVGKEIVDYTQQKIKGSIVLAELLRRPGFHYPDLEKF 533 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361 G++ L EK VEI+IKY G+I RQQ+Q++Q+ + LP L+Y A+ TLS+EAR Sbjct: 534 QLGNEELKPEEKTSVEIEIKYSGYIKRQQTQIEQVSRHSQKRLPPGLNYMAIETLSMEAR 593 Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451 EKL + +P TIGQ G++PADI AL + Sbjct: 594 EKLTQFQPLTIGQAGRIGGVNPADINALLV 623 >gi|7674053|sp|Q9WYA1|GIDA_THEMA GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443705|pir||F72400 glucose-inhibited division protein A - Thermotoga maritima (strain MSB8) >gi|4980759|gb|AAD35351.1|AE001708_19 (AE001708) glucose-inhibited division protein A [Thermotoga maritima] Length = 629 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | 629 0 150 300 450 600 Plus Strand HSPs: Score = 228 (80.3 bits), Expect = 4.0e-17, P = 4.0e-17 Identities = 54/144 (37%), Positives = 87/144 (60%), Frame = +2 Query: 20 RISEEKKRLKSVRISGGDLAAEV-TNLSGQPVKDFSTLESLLKKPHIQY---EILDKHDF 187 RI+EE +RLK V + D ++ T+L P+K+ + LLK+P + Y + LD + Sbjct: 479 RINEEIERLKKVIVKPSDRVNDLLTSLRTSPLKEPVSFYQLLKRPQLSYSALKFLDPNPI 538 Query: 188 GDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREK 367 D + E VEI++KYEG+I + ++ ++ +P DLDY A+ LS EAR+K Sbjct: 539 DDPEVV----EQVEINVKYEGYIQKMFEEVAVFEKYENYEIPHDLDYDAVPNLSTEARDK 594 Query: 368 LPKVRPQTIGQXAN*VGLSPADITALFL 451 L K+RP++IGQ G++P+DI+ L + Sbjct: 595 LKKIRPRSIGQAMRIPGINPSDISNLII 622 >gi|121187|sp|P25812|GIDA_BACSU GLUCOSE INHIBITED DIVISION PROTEIN A >gi|279710|pir||BWBSGA glucose-inhibited division protein gidA - Bacillus subtilis >gi|40026|emb|CAA44404.1| (X62539) homologous to E.coli gidA [Bacillus subtilis] >gi|467385|dbj|BAA05231.1| (D26185) unknown [Bacillus subtilis] >gi|2636648|emb|CAB16138.1| (Z99124) glucose-inhibited division protein [Bacillus subtilis] Length = 628 Frame 2 hits (HSPs): ____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 628 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 9..49 BLOCKS BL01280B: Glucose inhibited division pro 68..119 BLOCKS BL01280C: Glucose inhibited division pro 138..188 BLOCKS BL01280D: Glucose inhibited division pro 197..213 BLOCKS BL01280E: Glucose inhibited division pro 239..271 BLOCKS BL01280F: Glucose inhibited division pro 273..300 BLOCKS BL01280G: Glucose inhibited division pro 345..391 BLOCKS BL01280H: Glucose inhibited division pro 417..463 BLOCKS BL01280I: Glucose inhibited division pro 569..615 DOMO DM02963: GIDAPROTEIN 5..162 DOMO DM01921: GIDAPROTEIN 164..628 PFAM GIDA: Glucose inhibited division protein 8..622 PRODOM PD003738: GIDA(14) 8..618 PROSITE GIDA_1: Glucose inhibited division prote 273..287 PROSITE GIDA_2: Glucose inhibited division prote 368..391 __________________ Plus Strand HSPs: Score = 225 (79.2 bits), Expect = 8.4e-17, P = 8.4e-17 Identities = 52/150 (34%), Positives = 87/150 (58%), Frame = +2 Query: 5 QDKRARISEEKKRLKSVRISGGDLAAE-VTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181 + K+A I EKKRL SV I E + +L G +KD L+K+P + YE + K Sbjct: 467 EKKKAAIEAEKKRLHSVIIKPSPENQEYIRSLGGSELKDGVRGTDLMKRPEMNYETVTKL 526 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361 + + + E VEI +KYEG+I + Q+++L +++ +P+ +DY A+ ++ EAR Sbjct: 527 APPEVPVPQDVAEQVEIQVKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEAR 586 Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451 +KL VRP ++ Q + G++PADI+ L + Sbjct: 587 QKLKNVRPLSVAQASRISGVNPADISILLV 616 >gi|121189|sp|P25756|GIDA_PSEPU GLUCOSE INHIBITED DIVISION PROTEIN A >gi|279709|pir||BWPSAP gidA protein - Pseudomonas putida >gi|581463|emb|CAA44419.1| (X62540) homologous to E.coli gidA [Pseudomonas putida] Length = 630 Frame 2 hits (HSPs): ____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 630 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 8..48 BLOCKS BL01280B: Glucose inhibited division pro 67..118 BLOCKS BL01280C: Glucose inhibited division pro 137..187 BLOCKS BL01280D: Glucose inhibited division pro 196..212 BLOCKS BL01280E: Glucose inhibited division pro 239..271 BLOCKS BL01280F: Glucose inhibited division pro 273..300 BLOCKS BL01280G: Glucose inhibited division pro 345..391 BLOCKS BL01280H: Glucose inhibited division pro 417..463 BLOCKS BL01280I: Glucose inhibited division pro 568..614 DOMO DM02963: GIDAPROTEIN 4..161 DOMO DM01921: GIDAPROTEIN 163..630 PFAM GIDA: Glucose inhibited division protein 7..621 PRODOM PD003738: GIDA(14) 7..618 PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 50..57 PROSITE GIDA_1: Glucose inhibited division prote 273..287 PROSITE GIDA_2: Glucose inhibited division prote 368..391 __________________ Plus Strand HSPs: Score = 204 (71.8 bits), Expect = 1.5e-14, P = 1.5e-14 Identities = 52/147 (35%), Positives = 82/147 (55%), Frame = +2 Query: 11 KRARISEEKKRLKSVRISGG-DLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDF 187 KR I E++RLKS + + + + G P+ +L +LL +P I Y L + Sbjct: 469 KRDGIEREEQRLKSTWVRPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEAT- 527 Query: 188 GDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREK 367 G +++ E VEI KY G+I RQQ ++ +L A + LP D+DY ++ LS E + K Sbjct: 528 GGEAIDPQVAEQVEIRTKYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGK 587 Query: 368 LPKVRPQTIGQXAN*VGLSPADITALFL 451 L + RPQT+GQ + G++PA I+ L + Sbjct: 588 LSQTRPQTLGQASRIPGVTPAAISLLLI 615 >gi|7674051|sp|O84506|GIDA_CHLTR GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443703|pir||H71503 probable fad-dependent oxidoreductase - Chlamydia trachomatis (serotype D, strain UW3/Cx) >gi|3328935|gb|AAC68099.1| (AE001323) FAD-dependent oxidoreductase [Chlamydia trachomatis] Length = 610 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | || 610 0 150 300 450 600 Plus Strand HSPs: Score = 202 (71.1 bits), Expect = 2.4e-14, P = 2.4e-14 Identities = 52/149 (34%), Positives = 82/149 (55%), Frame = +2 Query: 5 QDKRARISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHD 184 Q+++A I +EK+RL GD +T + +P + L L + P D D Sbjct: 468 QEQKACIEQEKERLSKTFRKYGDTVVPLTKVLCRPEVSYQQL--LTEFP------ADVRD 519 Query: 185 FGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEARE 364 G + +E++IKY G+I RQQ+ ++ + ++ +PED+DY++++ LSLEARE Sbjct: 520 LGP-----VVGASLEMEIKYSGYISRQQTLIRSMERSENISIPEDIDYHSISALSLEARE 574 Query: 365 KLPKVRPQTIGQXAN*VGLSPADITALFL 451 KL K P+TIG A G+S ADI L + Sbjct: 575 KLSKFTPRTIGSAARISGISVADIQVLMV 603 >gi|2851497|sp|P17112|GIDA_ECOLI GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7429007|pir||BVECQA glucose inhibited division protein - Escherichia coli >gi|2367273|gb|AAC76764.1| (AE000451) glucose-inhibited division; chromosome replication? [Escherichia coli] Length = 629 Frame 2 hits (HSPs): ____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 629 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 8..48 BLOCKS BL01280B: Glucose inhibited division pro 67..118 BLOCKS BL01280C: Glucose inhibited division pro 137..187 BLOCKS BL01280D: Glucose inhibited division pro 196..212 BLOCKS BL01280E: Glucose inhibited division pro 239..271 BLOCKS BL01280F: Glucose inhibited division pro 273..300 BLOCKS BL01280G: Glucose inhibited division pro 345..391 BLOCKS BL01280H: Glucose inhibited division pro 417..463 BLOCKS BL01280I: Glucose inhibited division pro 570..616 DOMO DM02963: GIDAPROTEIN 4..161 DOMO DM01921: GIDAPROTEIN 163..628 PFAM GIDA: Glucose inhibited division protein 7..623 PRODOM PD003738: GIDA(14) 7..620 PROSITE GIDA_1: Glucose inhibited division prote 273..287 PROSITE GIDA_2: Glucose inhibited division prote 368..391 __________________ Plus Strand HSPs: Score = 200 (70.4 bits), Expect = 4.1e-14, P = 4.1e-14 Identities = 51/150 (34%), Positives = 81/150 (54%), Frame = +2 Query: 8 DKRARISEEKKRLKSVRIS-GGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDK-H 181 +K I E++RLKS ++ + AAEV P+ ++ E LL++P + YE L Sbjct: 468 EKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLT 527 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361 F E VEI +KYEG+I RQQ ++++ + ++ LP LDY ++ LS E Sbjct: 528 PFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVI 587 Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451 KL +P +IGQ + G++PA I+ L + Sbjct: 588 AKLNDHKPASIGQASRISGVTPAAISILLV 617 >gi|7190812|gb|AAF39588.1| (AE002346) glucose inhibited division protein A [Chlamydia muridarum] Length = 610 Frame 2 hits (HSPs): __ __________ __________________________________________________ Database sequence: | | | | || 610 0 150 300 450 600 Plus Strand HSPs: Score = 184 (64.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14 Identities = 40/109 (36%), Positives = 66/109 (60%), Frame = +2 Query: 128 LESLLKKPHIQYE-ILDKHDFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHR 304 L +L +P + Y+ +L + K + +E++IKY G+I RQQ+ ++ + ++ Sbjct: 495 LTKILCRPEVSYQQLLTEFPEDVKDWGPIIGASLEMEIKYSGYISRQQTLIRSMEKAENT 554 Query: 305 PLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADITALFL 451 +PE +DY++++ LSLEAREKL K P+TIG A G+S ADI L + Sbjct: 555 LIPEGIDYHSISALSLEAREKLSKFTPRTIGSAARISGISVADIQVLMV 603 Score = 38 (13.4 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14 Identities = 8/12 (66%), Positives = 10/12 (83%), Frame = +2 Query: 68 GDLAAEVTNLSG 103 G + AEVT+LSG Sbjct: 68 GGVMAEVTDLSG 79 >gi|1707903|sp|P53362|GIDA_BORBU GLUCOSE INHIBITED DIVISION PROTEIN A >gi|1200212|emb|CAA78149.1| (Z12160) gidA [Borrelia burgdorferi] >gi|2689170|emb|CAA06005.1| (AJ003222) glucose inhibited division protein A [Borrelia burgdorferi] Length = 621 Frame 2 hits (HSPs): ____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 621 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 4..44 BLOCKS BL01280B: Glucose inhibited division pro 63..114 BLOCKS BL01280C: Glucose inhibited division pro 135..185 BLOCKS BL01280D: Glucose inhibited division pro 194..210 BLOCKS BL01280E: Glucose inhibited division pro 236..268 BLOCKS BL01280F: Glucose inhibited division pro 270..297 BLOCKS BL01280G: Glucose inhibited division pro 342..388 BLOCKS BL01280H: Glucose inhibited division pro 414..460 BLOCKS BL01280I: Glucose inhibited division pro 559..605 DOMO DM02963: GIDAPROTEIN 1..159 DOMO DM01921: GIDAPROTEIN 161..621 PFAM GIDA: Glucose inhibited division protein 3..612 PRODOM PD003738: GIDA(14) 3..609 PROSITE GIDA_1: Glucose inhibited division prote 270..284 PROSITE GIDA_2: Glucose inhibited division prote 365..388 __________________ Plus Strand HSPs: Score = 194 (68.3 bits), Expect = 1.8e-13, P = 1.8e-13 Identities = 55/147 (37%), Positives = 80/147 (54%), Frame = +2 Query: 11 KRARISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFG 190 K +R+ E K+ LK R+S D+ E L KDF +LK P I + L K D Sbjct: 466 KESRVEEIKELLKQRRLSLKDVVDE--QLKKHVSKDFY---HILKDPSISLDNLIKID-P 519 Query: 191 DKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKL 370 S S++ E VE+D+KYEG+I RQ+ +++L + LP D +Y + LS EAREK Sbjct: 520 SLSDSKVILEQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKF 579 Query: 371 PKVRPQTIGQXAN*VGLSPADITALFL 451 K++P T+ Q + G+ DIT L + Sbjct: 580 SKIQPATLAQASRIPGIRSTDITVLLI 606 >gi|2494733|sp|P94613|GIDA_COXBU GLUCOSE INHIBITED DIVISION PROTEIN A >gi|1780760|emb|CAA71459.1| (Y10436) orf627; translated orf similarity to SWISS-PROT: GIDA_ECOLI and GIDA_PSEPU glucose inhibited division protein A of E.coli and Pseudomonas putida [Coxiella burnetii] Length = 627 Frame 2 hits (HSPs): _____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 627 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 9..49 BLOCKS BL01280B: Glucose inhibited division pro 68..119 BLOCKS BL01280C: Glucose inhibited division pro 138..188 BLOCKS BL01280D: Glucose inhibited division pro 197..213 BLOCKS BL01280E: Glucose inhibited division pro 240..272 BLOCKS BL01280F: Glucose inhibited division pro 274..301 BLOCKS BL01280G: Glucose inhibited division pro 346..392 BLOCKS BL01280H: Glucose inhibited division pro 418..464 BLOCKS BL01280I: Glucose inhibited division pro 571..617 PFAM GIDA: Glucose inhibited division protein 8..624 PRODOM PD003738: GIDA(14) 8..623 PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 51..58 PROSITE GIDA_1: Glucose inhibited division prote 274..288 PROSITE GIDA_2: Glucose inhibited division prote 369..392 __________________ Plus Strand HSPs: Score = 194 (68.3 bits), Expect = 1.8e-13, P = 1.8e-13 Identities = 48/149 (32%), Positives = 81/149 (54%), Frame = +2 Query: 11 KRARISEEKKRLKSVRISGGDLAAEVTNLSGQPV--KDFSTLESLLKKPHIQYEILDK-H 181 K+ I +E++RLK RI A+ Q + +D+S ++ LL++P I Y L + Sbjct: 470 KKETIEKEQQRLKKQRIWPKSTVAKAIESRFQQLLERDYSAMD-LLRRPEINYPALMQIE 528 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361 + G L E ++I KYEG++ Q +++ + Q +P LDY +T LS E R Sbjct: 529 ELGPAVLEPSVAEQIDIQAKYEGYLTHQLAEIARQKKYQTAQIPSSLDYNQVTGLSNEVR 588 Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451 +KL + +P T+GQ + G++PA I+ L + Sbjct: 589 QKLNETKPTTLGQASRIPGITPAAISLLLV 618 >gi|7443701|pir||B70122 glucose-inhibited division protein A (gidA) - Lyme disease spirochete >gi|2688059|gb|AAC66557.1| (AE001128) glucose inhibited division protein A (gidA) [Borrelia burgdorferi] Length = 627 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | | | 627 0 150 300 450 600 Plus Strand HSPs: Score = 194 (68.3 bits), Expect = 1.8e-13, P = 1.8e-13 Identities = 55/147 (37%), Positives = 80/147 (54%), Frame = +2 Query: 11 KRARISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFG 190 K +R+ E K+ LK R+S D+ E L KDF +LK P I + L K D Sbjct: 472 KESRVEEIKELLKQRRLSLKDVVDE--QLKKHVSKDFY---HILKDPSISLDNLIKID-P 525 Query: 191 DKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKL 370 S S++ E VE+D+KYEG+I RQ+ +++L + LP D +Y + LS EAREK Sbjct: 526 SLSDSKVILEQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKF 585 Query: 371 PKVRPQTIGQXAN*VGLSPADITALFL 451 K++P T+ Q + G+ DIT L + Sbjct: 586 SKIQPATLAQASRIPGIRSTDITVLLI 612 >gi|1169896|sp|P44763|GIDA_HAEIN GLUCOSE INHIBITED DIVISION PROTEIN A >gi|1074129|pir||I64078 gidA protein - Haemophilus influenzae (strain Rd KW20) >gi|1573570|gb|AAC22240.1| (U32739) glucose inhibited division protein (gidA) [Haemophilus influenzae Rd] Length = 629 Frame 2 hits (HSPs): ____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 629 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 8..48 BLOCKS BL01280B: Glucose inhibited division pro 67..118 BLOCKS BL01280C: Glucose inhibited division pro 137..187 BLOCKS BL01280D: Glucose inhibited division pro 196..212 BLOCKS BL01280E: Glucose inhibited division pro 239..271 BLOCKS BL01280F: Glucose inhibited division pro 273..300 BLOCKS BL01280G: Glucose inhibited division pro 345..391 BLOCKS BL01280H: Glucose inhibited division pro 417..463 BLOCKS BL01280I: Glucose inhibited division pro 570..616 PFAM GIDA: Glucose inhibited division protein 7..623 PRODOM PD003738: GIDA(14) 7..620 PROSITE GIDA_1: Glucose inhibited division prote 273..287 PROSITE GIDA_2: Glucose inhibited division prote 368..391 __________________ Plus Strand HSPs: Score = 190 (66.9 bits), Expect = 4.9e-13, P = 4.9e-13 Identities = 46/149 (30%), Positives = 83/149 (55%), Frame = +2 Query: 11 KRARISEEKKRLKSVRISG-GDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDF 187 K I +E++RL+S+ + + E + G P+ ++ E LL++P + Y+IL Sbjct: 469 KMENIEQERQRLRSIWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTP 528 Query: 188 GDKSLSRMEK-ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEARE 364 ++ E E VEI IKY+G+I QQ ++++ ++ +P + DY ++ LS E R Sbjct: 529 YKPAMEDKEAVEQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRA 588 Query: 365 KLPKVRPQTIGQXAN*VGLSPADITALFL 451 KL + RP +IGQ + G++PA I+ + + Sbjct: 589 KLEQHRPVSIGQASRISGITPAAISIILV 617 >gi|43257|emb|CAA25773.1| (X01631) gidA protein [Escherichia coli] >gi|290590|gb|AAA62093.1| (L10328) glucose inhibited division protein [Escherichia coli] Length = 628 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | | | 628 0 150 300 450 600 Plus Strand HSPs: Score = 189 (66.5 bits), Expect = 6.3e-13, P = 6.3e-13 Identities = 51/149 (34%), Positives = 80/149 (53%), Frame = +2 Query: 8 DKRARISEEKKRLKSVRIS-GGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDK-H 181 +K I E++RLKS ++ + AAEV P+ ++ E LL+ P + YE L Sbjct: 468 EKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLR-PEMTYEKLTTLT 526 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361 F E VEI +KYEG+I RQQ ++++ + ++ LP LDY ++ LS E Sbjct: 527 PFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVI 586 Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451 KL +P +IGQ + G++PA I+ L + Sbjct: 587 AKLNDHKPASIGQASRISGVTPAAISILLV 616 >gi|7674055|sp|Q9Z7T7|GIDA_CHLPN GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443704|pir||E72056 fad-dependent oxidoreductase - Chlamydia pneumoniae (strain CWL029) >gi|4376914|gb|AAD18756.1| (AE001646) FAD-dependent oxidoreductase [Chlamydophila pneumoniae] >gi|7189065|gb|AAF38013.1| (AE002174) glucose inhibited division protein A [Chlamydophila pneumoniae AR39] Length = 611 Frame 2 hits (HSPs): __________ __________________________________________________ Database sequence: | | | | || 611 0 150 300 450 600 Plus Strand HSPs: Score = 186 (65.5 bits), Expect = 1.3e-12, P = 1.3e-12 Identities = 41/110 (37%), Positives = 65/110 (59%), Frame = +2 Query: 125 TLESLLKKPHIQYEILDKHDFGD-KSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQH 301 +L L +P + Y++L + D + L + +E++IKY G+I RQ+ +Q L + Sbjct: 494 SLAKALSRPEVSYDMLREAFPNDIRDLGAVLNASLEMEIKYSGYIDRQKILIQSLEKAES 553 Query: 302 RPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADITALFL 451 +PEDLDY +T LSLEA+EKL K P+T+G + G++ ADI L + Sbjct: 554 LLIPEDLDYKQITALSLEAQEKLAKFTPRTLGSASRISGIASADIQVLMI 603 >gi|7225413|gb|AAF40650.1| (AE002376) glucose inhibited division protein A [Neisseria meningitidis MC58] Length = 631 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | 631 0 150 300 450 600 Plus Strand HSPs: Score = 182 (64.1 bits), Expect = 3.6e-12, P = 3.6e-12 Identities = 48/151 (31%), Positives = 83/151 (54%), Frame = +2 Query: 8 DKRARISEEKKRLKSVRISGGDLA-AEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHD 184 +KR + E +RLK+ + LA E + GQ + + L LL++P++ Y L + Sbjct: 471 EKREAVEREIQRLKTTWYTPQKLAEGEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLE 530 Query: 185 --FGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEA 358 ++LS E VEI +KY+G+I RQ ++ + LP+ +DY + LS E Sbjct: 531 GAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEV 590 Query: 359 REKLPKVRPQTIGQXAN*VGLSPADITALFLV 454 ++KL + +P+T+GQ + G++PA + AL +V Sbjct: 591 QQKLNQHKPETVGQASRISGVTPAAV-ALLMV 621 >gi|7378847|emb|CAB83390.1| (AL162752) glucose inhibited division protein A homolog [Neisseria meningitidis] Length = 628 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | 628 0 150 300 450 600 Plus Strand HSPs: Score = 181 (63.7 bits), Expect = 4.6e-12, P = 4.6e-12 Identities = 48/151 (31%), Positives = 83/151 (54%), Frame = +2 Query: 8 DKRARISEEKKRLKSVRISGGDLAA-EVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHD 184 +KR + E +RLK+ + LA E + GQ + + L LL++P++ Y L + Sbjct: 468 EKREAVEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLE 527 Query: 185 --FGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEA 358 ++LS E VEI +KY+G+I RQ ++ + LP+ +DY + LS E Sbjct: 528 GAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEV 587 Query: 359 REKLPKVRPQTIGQXAN*VGLSPADITALFLV 454 ++KL + +P+T+GQ + G++PA + AL +V Sbjct: 588 QQKLNQHKPETVGQASRISGVTPAAV-ALLMV 618 >gi|3913737|sp|O51879|GIDA_BUCAP GLUCOSE INHIBITED DIVISION PROTEIN A >gi|2827025|gb|AAC38117.1| (AF008210) putative chromosome replication protein [Buchnera aphidicola] Length = 631 Frame 2 hits (HSPs): ____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 631 0 150 300 450 600 __________________ Annotated Domains: PFAM GIDA: Glucose inhibited division protein 9..625 PRODOM PD003738: GIDA(14) 9..622 PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 52..59 PROSITE GIDA_1: Glucose inhibited division prote 275..289 PROSITE GIDA_2: Glucose inhibited division prote 370..393 __________________ Plus Strand HSPs: Score = 170 (59.8 bits), Expect = 7.0e-11, P = 7.0e-11 Identities = 50/150 (33%), Positives = 79/150 (52%), Frame = +2 Query: 8 DKRARISEEKKRLKSVRISGGDLAAEVTNLSGQPV--KDFSTLESLLKKPHIQYEILDKH 181 +K IS EK RLK ++I + + N V K+ + L +LLK+P I YE L Sbjct: 470 EKVLNISNEKNRLKKIKIYPKSSDSTILNQLFNIVLTKEINIL-NLLKRPEITYENLKYL 528 Query: 182 DFGDKSLSRMEKEC-VEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEA 358 +S +E +E +IKYEG+I RQ ++ + + ++ PL DY + LS EA Sbjct: 529 KNFKVGISDLEAAGQIENEIKYEGYIKRQLEEINRHLKNENTPLLPTYDYNKIKGLSHEA 588 Query: 359 REKLPKVRPQTIGQXAN*VGLSPADITALFL 451 KL +P ++GQ + G++PA I+ L + Sbjct: 589 VLKLNDYKPVSVGQASRISGITPATISILLI 619 >gi|7471928|pir||D75569 gidA protein - Deinococcus radiodurans (strain R1) >gi|6457686|gb|AAF09619.1|AE001866_6 (AE001866) gidA protein [Deinococcus radiodurans] Length = 600 Frame 2 hits (HSPs): ___________ __________________________________________________ Database sequence: | | | | | 600 0 150 300 450 Plus Strand HSPs: Score = 160 (56.3 bits), Expect = 7.7e-10, P = 7.7e-10 Identities = 43/122 (35%), Positives = 70/122 (57%), Frame = +2 Query: 86 VTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFG---DKSLSRMEKECVEIDIKYEGFI 256 + +LS Q ++ T ++ L++P + + D G L E+E VEI +KY G+I Sbjct: 471 IKSLSKQRMQG-QTADAWLRRPELS--LADVETLGATLPAELGASEREAVEIRVKYAGYI 527 Query: 257 LRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADI 436 R +SQL+ AK +++ +T LS EAREKL +++PQT+ Q + G+ ADI Sbjct: 528 ARAESQLRS-EAKARELSLSGVNFAGITALSNEAREKLTRLQPQTVEQASRISGVRHADI 586 Query: 437 TALFL 451 +AL + Sbjct: 587 SALLV 591 >gi|3913739|sp|O66962|GIDA_AQUAE GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443702|pir||G70366 glucose inhibited division protein A - Aquifex aeolicus >gi|2983328|gb|AAC06917.1| (AE000706) glucose inhibited division protein A [Aquifex aeolicus] Length = 617 Frame 2 hits (HSPs): _______ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 617 0 150 300 450 600 __________________ Annotated Domains: PFAM GIDA: Glucose inhibited division protein 8..617 PRODOM PD003738: GIDA(14) 8..614 PROSITE GIDA_1: Glucose inhibited division prote 280..294 __________________ Plus Strand HSPs: Score = 156 (54.9 bits), Expect = 2.2e-09, P = 2.2e-09 Identities = 34/79 (43%), Positives = 51/79 (64%), Frame = +2 Query: 215 KECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTI 394 KE VEI +KYE +I R++ ++L + +P D+DY + L+ EAREKL K +P T+ Sbjct: 533 KEEVEIQLKYEPYIERERKLNEKLKKLEDTKIPPDIDYDKIPGLTKEAREKLKKFKPITV 592 Query: 395 GQXAN*VGLSPADITALFL 451 GQ + G++PA ITAL + Sbjct: 593 GQASRIDGITPAAITALLV 611 >gi|7657947|emb|CAB89205.1| (AJ277593) putative glucose inhibited division protein A [Thermus thermophilus] Length = 596 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | 596 0 150 300 450 Plus Strand HSPs: Score = 150 (52.8 bits), Expect = 9.0e-09, P = 9.0e-09 Identities = 43/137 (31%), Positives = 72/137 (52%), Frame = +2 Query: 35 KKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFGDKSLSRME 214 K+ L+ V +AAE+ L V+ S L+ L++P Y L + + LS E Sbjct: 453 KEDLERVEAKYRRVAAELRRLQALRVEGVSGLQ-WLRRPENTYRALAERFPPSEPLSPEE 511 Query: 215 KECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTI 394 VE+ KY G+I RQ+ +++ + +PE +D+ + LS EA EKL + RP+++ Sbjct: 512 AYQVEVRAKYAGYIERQERLREKMKDLEAFRIPEGMDFPKVPGLSREAAEKLSRHRPKSL 571 Query: 395 GQXAN*VGLSPADITAL 445 + A G+ +D+TAL Sbjct: 572 AEAARIPGVRDSDLTAL 588 >gi|7674054|sp|Q9XBF8|GIDA_CAUCR GLUCOSE INHIBITED DIVISION PROTEIN A >gi|5174778|gb|AAD40695.1| (U87804) GidA [Caulobacter crescentus] Length = 618 Frame 2 hits (HSPs): ________ __________________________________________________ Database sequence: | | | | | | 618 0 150 300 450 600 Plus Strand HSPs: Score = 149 (52.5 bits), Expect = 1.2e-08, P = 1.2e-08 Identities = 32/77 (41%), Positives = 48/77 (62%), Frame = +2 Query: 215 KECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTI 394 +E +EI+ Y G++ RQ++ + L + LP DLDY + +LS E R KL +VRP T+ Sbjct: 532 REQIEIEAAYAGYLDRQRADAESLRKDEDLRLPADLDYAEIGSLSNEVRGKLARVRPLTL 591 Query: 395 GQXAN*VGLSPADITAL 445 GQ A G++P +TAL Sbjct: 592 GQAARIEGVTPGALTAL 608 >gi|5731953|emb|CAB52589.1| (AJ245515) glucose inhibited division protein A, putative [Sweet potato little leaf phytoplasma] Length = 183 Frame 2 hits (HSPs): ___________________________________ __________________________________________________ Database sequence: | | | | | 183 0 50 100 150 Plus Strand HSPs: Score = 136 (47.9 bits), Expect = 2.3e-08, P = 2.3e-08 Identities = 36/132 (27%), Positives = 72/132 (54%), Frame = +2 Query: 5 QDKRARISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHD 184 ++K+ +I+ K++L + + L N + + +L LLK+ ++ +IL+ Sbjct: 58 KNKQMQINYLKEKLHNFYLDADSLYKFNINSDSRRI----SLYQLLKRSDLKEDILNNFF 113 Query: 185 FGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEARE 364 S+ +E+ V I IKYE +IL+ + ++++ + + +P ++DY + LS EA+E Sbjct: 114 ASQYSVDVLEQ--VGIQIKYEDYILKSEKEVKKNSHLEEKVIPNNIDYKIIKNLSQEAKE 171 Query: 365 KLPKVRPQTIGQ 400 KL K++P I Q Sbjct: 172 KLTKIKPFNIAQ 183 >gi|7109686|gb|AAF36757.1| (L35043) glucose inhibited division protein A [Mycoplasma gallisepticum] Length = 611 Frame 2 hits (HSPs): __________ __________________________________________________ Database sequence: | | | | || 611 0 150 300 450 600 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 5.3e-08, P = 5.3e-08 Identities = 37/110 (33%), Positives = 64/110 (58%), Frame = +2 Query: 116 DFSTLESLLKKPHIQY-EILD--KHDFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQL 286 +FS E LK+P I+ E+L + D+ + L ++ +EI +KYEG+I ++ + L Sbjct: 494 NFSLYE-FLKRPEIKLIELLKLIEFDYSNYDLELLKN--IEITVKYEGYIKKESRLVNSL 550 Query: 287 VAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADITAL 445 + +P+DL Y + LS+EA +KL K++P + Q G++ ADI +L Sbjct: 551 KNLESIKIPQDLIYDKVQNLSIEAIDKLNKIKPLNLAQAQRISGINLADIISL 603 >gi|6016130|sp|O83084|GIDA_TREPA GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443700|pir||C71374 probable glucose inhibited division protein A (gidA) - syphilis spirochete >gi|3322299|gb|AAC65038.1| (AE001189) glucose inhibited division protein A (gidA) [Treponema pallidum] Length = 630 Frame 2 hits (HSPs): __ _______ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 630 0 150 300 450 600 __________________ Annotated Domains: PFAM GIDA: Glucose inhibited division protein 8..630 PRODOM PD003738: GIDA(14) 8..628 PROSITE GIDA_2: Glucose inhibited division prote 377..400 __________________ Plus Strand HSPs: Score = 128 (45.1 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08 Identities = 26/76 (34%), Positives = 44/76 (57%), Frame = +2 Query: 218 ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIG 397 + V ++I+YE +I Q ++ Q+ + +P DY ++ LS+E+R +L VRP TIG Sbjct: 549 QSVGVEIRYEHYIAAQDQRIAQVEKMEGIKIPAHFDYARISGLSVESRTRLEHVRPDTIG 608 Query: 398 QXAN*VGLSPADITAL 445 Q G+ P+D+ L Sbjct: 609 QVGRMRGIRPSDVMLL 624 Score = 36 (12.7 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08 Identities = 8/17 (47%), Positives = 12/17 (70%), Frame = +2 Query: 122 STLESLLKKPHIQYEIL 172 S +E+L KK ++EIL Sbjct: 476 SAVETLQKKMRTKHEIL 492 >gi|94582|pir||S21554 division protein gidA - Lyme disease spirochete (fragment) Length = 65 Frame 2 hits (HSPs): ________________________________________________ __________________________________________________ Database sequence: | | | | | 65 0 20 40 60 Plus Strand HSPs: Score = 128 (45.1 bits), Expect = 1.6e-07, P = 1.6e-07 Identities = 27/63 (42%), Positives = 41/63 (65%), Frame = +2 Query: 218 ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIG 397 E VE+D+KYEG+I RQ+ +++L + LP D +Y + LS EAREK K++P T+ Sbjct: 1 EQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKFSKIQPATLA 60 Query: 398 QXA 406 Q + Sbjct: 61 QAS 63 >gi|6225445|sp|Q9ZE90|GIDA_RICPR GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443699|pir||H71713 glucose inhibited division protein A (gidA) RP056 - Rickettsia prowazekii >gi|3860626|emb|CAA14527.1| (AJ235270) GLUCOSE INHIBITED DIVISION PROTEIN A (gidA) [Rickettsia prowazekii] Length = 621 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | 621 0 150 300 450 600 Plus Strand HSPs: Score = 138 (48.6 bits), Expect = 1.9e-07, P = 1.9e-07 Identities = 40/154 (25%), Positives = 80/154 (51%), Frame = +2 Query: 8 DKRARISEEK-KRLKSVRISGGDLAAEVTNLS--G-QPVKD--FSTLESLLKKPHIQYEI 169 +KR + +K K ++ ++ +L+ + L+ G Q +D + T+ L K P E Sbjct: 456 EKRKKFFTKKCKNIEKTKLLLNNLSLTTSKLAKMGIQVAQDGKYKTILDLFKIPSFNVEQ 515 Query: 170 LDKHDFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLS 349 K K + + + I+ KY ++ RQ + + +++ + +P+++DY+ + ++S Sbjct: 516 AIKIFPILKKQNNNILQLLYIEAKYASYLTRQYADINLFQSEEIQLIPKNIDYFKIPSIS 575 Query: 350 LEAREKLPKVRPQTIGQXAN*VGLSPADITALFL 451 LE +EKL +P TIG G++PA ITA+ + Sbjct: 576 LEIQEKLSYHKPATIGVARRISGITPASITAIII 609 >gi|2119962|pir||I40083 division protein - Lyme disease spirochete (fragment) Length = 65 Frame 2 hits (HSPs): ________________________________________________ __________________________________________________ Database sequence: | | | | | 65 0 20 40 60 Plus Strand HSPs: Score = 126 (44.4 bits), Expect = 2.7e-07, P = 2.7e-07 Identities = 26/63 (41%), Positives = 41/63 (65%), Frame = +2 Query: 218 ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIG 397 E VE+D+KYEG+I RQ+ +++L + LP D +Y + +S EAREK K++P T+ Sbjct: 1 EQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGMSREAREKFSKIQPATLA 60 Query: 398 QXA 406 Q + Sbjct: 61 QAS 63 >gi|5672641|dbj|BAA82679.1| (AB013492) 77%-identity [Bacillus halodurans] Length = 579 Frame 2 hits (HSPs): __________ __________________________________________________ Database sequence: | | | | | 579 0 150 300 450 Plus Strand HSPs: Score = 132 (46.5 bits), Expect = 7.5e-07, P = 7.5e-07 Identities = 33/107 (30%), Positives = 58/107 (54%), Frame = +2 Query: 8 DKRARISEEKKRLKSVRISGG-DLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH- 181 +K+A+I+ EKKRL+S+ + ++ A + + P+K+ LK+P + YE + K Sbjct: 468 EKKAQIAAEKKRLESITVKPSKEVNALLEEVGSAPLKEAVQANVFLKRPEVTYEHVAKVI 527 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDL 322 ++ LS E VEI IKYEG+I + Q+++ + +P L Sbjct: 528 PAPEQELSADVAEQVEIQIKYEGYISKMLQQVERAKKMNDKKIPRRL 574 >gi|7674056|sp|Q9ZML9|GIDA_HELPJ GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443707|pir||D71961 glucose inhibited division protein A - Helicobacter pylori (strain J99) >gi|4154720|gb|AAD05783.1| (AE001458) GLUCOSE INHIBITED DIVISION PROTEIN A [Helicobacter pylori J99] Length = 621 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | 621 0 150 300 450 600 Plus Strand HSPs: Score = 131 (46.1 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 41/149 (27%), Positives = 72/149 (48%), Frame = +2 Query: 5 QDKRARISEEKKRLKS-VRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181 +DK+A I E KRLK V ++ + L P+ D SLL + E + Sbjct: 465 KDKQA-IQENLKRLKECVLTPSKEVLKRLNELGENPINDKMDGVSLLARDSFNLEKMRSF 523 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361 L+ E ++I+ KY +I +Q + ++ + +P+ + + LSLEA Sbjct: 524 FSFLVPLNERVLEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAV 583 Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451 EKL K RP+++ + + G++PA++ L L Sbjct: 584 EKLEKFRPKSLFEASEISGITPANLDVLHL 613 >gi|2258459|gb|AAB63296.1| (AF008565) GidA [Helicobacter pylori] Length = 621 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | 621 0 150 300 450 600 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 5.9e-06, P = 5.9e-06 Identities = 40/149 (26%), Positives = 70/149 (46%), Frame = +2 Query: 5 QDKRARISEEKKRLKS-VRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181 +DK+ I + KRLK V L + L P+ D SLL + E + Sbjct: 465 KDKQ-EIQDNLKRLKECVLTPSKKLLKRLNELDENPINDKVNGVSLLARDSFNAEKMRSF 523 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361 L+ E ++I+ KY +I +Q + ++ + +P+ + + LSLEA Sbjct: 524 FSFLAPLNERVLEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAV 583 Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451 EKL K RP+++ + + G++PA++ L L Sbjct: 584 EKLEKFRPKSLFEASEISGITPANLDVLHL 613 >gi|2494734|sp|P56138|GIDA_HELPY GLUCOSE INHIBITED DIVISION PROTEIN A >gi|7443708|pir||E64546 glucose inhibited division protein - Helicobacter pylori (strain 26695) >gi|2313303|gb|AAD07281.1| (AE000541) glucose inhibited division protein (gidA) [Helicobacter pylori 26695] Length = 621 Frame 2 hits (HSPs): _____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 621 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 6..46 BLOCKS BL01280B: Glucose inhibited division pro 65..116 BLOCKS BL01280C: Glucose inhibited division pro 135..185 BLOCKS BL01280D: Glucose inhibited division pro 194..210 BLOCKS BL01280E: Glucose inhibited division pro 236..268 BLOCKS BL01280F: Glucose inhibited division pro 270..297 BLOCKS BL01280G: Glucose inhibited division pro 342..388 BLOCKS BL01280H: Glucose inhibited division pro 414..460 BLOCKS BL01280I: Glucose inhibited division pro 566..612 PFAM GIDA: Glucose inhibited division protein 5..621 PRODOM PD003738: GIDA(14) 6..619 PROSITE GIDA_1: Glucose inhibited division prote 270..284 PROSITE GIDA_2: Glucose inhibited division prote 365..388 __________________ Plus Strand HSPs: Score = 121 (42.6 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 38/149 (25%), Positives = 72/149 (48%), Frame = +2 Query: 5 QDKRARISEEKKRLKSVRISGG-DLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181 +DK+ I + KRLK ++ ++ + L P+ D SLL + E + Sbjct: 465 KDKQ-EIQDNLKRLKEYILTPSKEVLKRLDELDENPINDKVDGVSLLARDSFNAEKMRSF 523 Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361 L+ E ++I+ KY +I +Q + ++ + +P+ + + LSLEA Sbjct: 524 FSFLAPLNERVLEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAV 583 Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451 EKL K RP+++ + + G++PA++ L L Sbjct: 584 EKLEKFRPKSLFEASEISGITPANLDVLHL 613 >gi|6321202 ref|NP_011278.1| Mto1p >gi|1723974|sp|P53070|YGY6_YEAST HYPOTHETICAL 75.4 KD PROTEIN IN HAP2-ADE5,6 INTERGENIC REGION >gi|2131633|pir||S64258 hypothetical protein YGL236c - yeast (Saccharomyces cerevisiae) >gi|1322897|emb|CAA96953.1| (Z72758) ORF YGL236c [Saccharomyces cerevisiae] Length = 679 Frame 2 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 679 0 150 300 450 600 Plus Strand HSPs: Score = 119 (41.9 bits), Expect = 2.3e-05, P = 2.3e-05 Identities = 27/77 (35%), Positives = 44/77 (57%), Frame = +2 Query: 224 VEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQX 403 + I KYE +I++Q ++ A ++ LP+D DY + TLS E + L +V+P TIGQ Sbjct: 584 INIQGKYEPYIVKQNQFVKAFQADENMLLPQDYDYRQLPTLSTECKLLLNRVQPLTIGQA 643 Query: 404 AN*VGLSPADITALFLV 454 G++ A + L+ V Sbjct: 644 RRIQGITAAALFELYRV 660 >gi|6912300 ref|NP_036255.1| CGI-02 protein >gi|7674427|sp|Q9Y2Z2|YC02_HUMAN HYPOTHETICAL PROTEIN CGI-02 >gi|4680645|gb|AAD27712.1|AF132937_1 (AF132937) CGI-02 protein [Homo sapiens] Length = 618 Frame 2 hits (HSPs): ________ __________________________________________________ Database sequence: | | | | | | 618 0 150 300 450 600 Plus Strand HSPs: Score = 117 (41.2 bits), Expect = 3.3e-05, P = 3.3e-05 Identities = 29/78 (37%), Positives = 44/78 (56%), Frame = +2 Query: 218 ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSL--EAREKLPKVRPQT 391 E ++I+ YE + Q +++ + + LP+DLDY + +SL E REKL RPQT Sbjct: 506 ERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQT 565 Query: 392 IGQXAN*VGLSPADITAL 445 IG + G++PA I L Sbjct: 566 IGAASRIPGVTPAAIINL 583 >gi|6898986|gb|AAF30444.1|AE002103_9 (AE002103) glucose inhibited division protein [Ureaplasma urealyticum] Length = 614 Frame 2 hits (HSPs): ___________ __________________________________________________ Database sequence: | | | | | | 614 0 150 300 450 600 Plus Strand HSPs: Score = 115 (40.5 bits), Expect = 5.4e-05, P = 5.4e-05 Identities = 34/121 (28%), Positives = 62/121 (51%), Frame = +2 Query: 83 EVTNLSGQPVKDFSTLESLLKKPHIQY-EILDKHDFGDKSLSRMEKECVEIDIKYEGFIL 259 ++ +L +K S L LK+P I+ ++L + + K V+I +K+EG+I Sbjct: 485 QIDDLKFTTLKTNSYLIDYLKRPEIKLNDLLIYCPIKIEDEQIINK--VQIQVKFEGYIK 542 Query: 260 RQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADIT 439 Q+ L+QL + L +DY + +SLE +KL K++P + Q + G++ DI Sbjct: 543 NQEENLKQLKRLNNIKLHAIVDYKEVPNISLETIDKLNKIKPLDLEQASRISGVNLTDIA 602 Query: 440 AL 445 + Sbjct: 603 MI 604 >gi|7291427|gb|AAF46854.1| (AE003457) CG4610 gene product [Drosophila melanogaster] Length = 661 Frame 2 hits (HSPs): ________ __________________________________________________ Database sequence: | | | | | | 661 0 150 300 450 600 Plus Strand HSPs: Score = 112 (39.4 bits), Expect = 0.00012, P = 0.00012 Identities = 25/86 (29%), Positives = 52/86 (60%), Frame = +2 Query: 188 GDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMT-TLSLEARE 364 G+++L+ E ++I+ Y F+ QQ ++ + ++ +P D+DY++ + +LS E R+ Sbjct: 567 GERNLA----ERLKIEALYSFFVDEQQRDVEDVRREERLSIPADIDYFSKSLSLSNEERQ 622 Query: 365 KLPKVRPQTIGQXAN*VGLSPADITAL 445 KL ++PQTI + G++P+ I + Sbjct: 623 KLTLIQPQTIAAASRIQGVTPSTIVRI 649 >gi|1346131|sp|P47619|GIDA_MYCGE GLUCOSE INHIBITED DIVISION PROTEIN A >gi|1361514|pir||I64241 glucose inhibited division protein A homolog - Mycoplasma genitalium >gi|3844967|gb|AAC71606.1| (U39719) glucose-inhibited division protein A (gidA) [Mycoplasma genitalium] Length = 612 Frame 2 hits (HSPs): _____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 612 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 4..44 BLOCKS BL01280B: Glucose inhibited division pro 63..114 BLOCKS BL01280C: Glucose inhibited division pro 133..183 BLOCKS BL01280D: Glucose inhibited division pro 192..208 BLOCKS BL01280E: Glucose inhibited division pro 236..268 BLOCKS BL01280F: Glucose inhibited division pro 270..297 BLOCKS BL01280G: Glucose inhibited division pro 342..388 BLOCKS BL01280H: Glucose inhibited division pro 414..460 BLOCKS BL01280I: Glucose inhibited division pro 559..605 DOMO DM01921: GIDAPROTEIN 329..612 PFAM GIDA: Glucose inhibited division protein 3..612 PRODOM PD003738: GIDA(14) 3..608 PROSITE GIDA_1: Glucose inhibited division prote 270..284 PROSITE GIDA_2: Glucose inhibited division prote 365..388 __________________ Plus Strand HSPs: Score = 108 (38.0 bits), Expect = 0.00091, P = 0.00091 Identities = 35/141 (24%), Positives = 62/141 (43%), Frame = +2 Query: 23 ISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFGDK-S 199 + +EKK+ + + +V L +L K+ I + L K D +K Sbjct: 464 LKKEKKKQELISFLKNTQVGKVKALKFTNKNTAQSLYDFNKRSEINLDKLIK-DLPEKYQ 522 Query: 200 LSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKV 379 L + +EI+IKYEG+I + + + L +P DY+ + L+ EA KL Sbjct: 523 LDSETLKQIEIEIKYEGYIKKNEKYFKGLDKLSKIKIPHTFDYHKVKNLASEAIFKLSNF 582 Query: 380 RPQTIGQXAN*VGLSPADITAL 445 +P + + G++ DI A+ Sbjct: 583 KPSNLAIASQIAGVNFNDIIAI 604 >gi|2494735|sp|P75221|GIDA_MYCPN GLUCOSE INHIBITED DIVISION PROTEIN A >gi|2146132|pir||S73611 glucose inhibited division protein gidA - Mycoplasma pneumoniae (strain ATCC 29342) >gi|1673956|gb|AAB95933.1| (AE000027) Mycoplasma pneumoniae, glucose inhibited division protein; similar to Swiss-Prot Accession Number P17112 and P03816, from E. coli Length = 612 Frame 2 hits (HSPs): ___________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | 612 0 150 300 450 600 __________________ Annotated Domains: BLOCKS BL01280A: Glucose inhibited division pro 4..44 BLOCKS BL01280B: Glucose inhibited division pro 63..114 BLOCKS BL01280C: Glucose inhibited division pro 133..183 BLOCKS BL01280D: Glucose inhibited division pro 192..208 BLOCKS BL01280E: Glucose inhibited division pro 236..268 BLOCKS BL01280F: Glucose inhibited division pro 270..297 BLOCKS BL01280G: Glucose inhibited division pro 342..388 BLOCKS BL01280H: Glucose inhibited division pro 414..460 BLOCKS BL01280I: Glucose inhibited division pro 559..605 PFAM GIDA: Glucose inhibited division protein 3..612 PRODOM PD003738: GIDA(14) 3..609 PROSITE GIDA_1: Glucose inhibited division prote 270..284 PROSITE GIDA_2: Glucose inhibited division prote 365..388 __________________ Plus Strand HSPs: Score = 108 (38.0 bits), Expect = 0.00091, P = 0.00091 Identities = 35/126 (27%), Positives = 63/126 (50%), Frame = +2 Query: 68 GDLAAEVTNL--SGQPVKDFSTLESLLKKPHIQYEILDKHDFGDKSLSRMEKECVEIDIK 241 G +AA N + Q + DF T + +K + + + D +SL++ ++IDIK Sbjct: 483 GQIAALKLNFKNTAQTLFDF-TKRAEIKLVDLVQLLPKRFDLDVQSLNQ-----IDIDIK 536 Query: 242 YEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGL 421 Y G+I + + + L +P L+Y+ + L+ EA KL K+RP + + G+ Sbjct: 537 YAGYIKKSEKYFKSLNNLSSVKIPLKLNYHKVPNLASEAIVKLSKIRPTDLSVASQVAGI 596 Query: 422 SPADITAL 445 + DI A+ Sbjct: 597 NFNDILAI 604 >gi|3122147|sp|O32806|GIDA_LACLC GLUCOSE INHIBITED DIVISION PROTEIN A >gi|2281305|gb|AAC45494.1| (U80409) glucose inhibited division protein homolog GidA [Lactococcus lactis subsp. cremoris] Length = 535 Frame 2 hits (HSPs): ________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | 535 0 150 300 450 __________________ Annotated Domains: PFAM GIDA: Glucose inhibited division protein 11..535 PROSITE GIDA_1: Glucose inhibited division prote 257..271 PROSITE GIDA_2: Glucose inhibited division prote 352..375 __________________ Plus Strand HSPs: Score = 106 (37.3 bits), Expect = 0.0025, P = 0.0025 Identities = 27/85 (31%), Positives = 42/85 (49%), Frame = +2 Query: 5 QDKRARISEEKKRLKSVRISG-GDLAAEVTNLSGQPVKDFSTLESLLKKPHIQY-EILDK 178 Q K A+ E KRL S ++ D ++ L P+KD T LK+P + Y E++D Sbjct: 451 QAKMAQFDREMKRLNSEKLKPLPDTQEKLGKLGFGPIKDALTGAEFLKRPEVNYDEVIDF 510 Query: 179 HDFGDKSLSRMEKECVEIDIKYEGF 253 + + R E +E +I YEG+ Sbjct: 511 IGQAPEVIDRTVSELIETEITYEGY 535 >gi|6968621|emb|CAB73442.1| (AL139077) glucose inhibited division protein A homolog [Campylobacter jejuni] Length = 619 Frame 2 hits (HSPs): ___________ __________________________________________________ Database sequence: | | | | | | 619 0 150 300 450 600 Plus Strand HSPs: Score = 99 (34.8 bits), Expect = 0.043, P = 0.042 Identities = 29/126 (23%), Positives = 61/126 (48%), Frame = +2 Query: 80 AEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFGDKSLSRMEKECVEIDIKYEGFIL 259 A + +L + L+ ++ + E L K D +++ + + KY +I Sbjct: 487 AFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREILNEAKYYHYIS 546 Query: 260 RQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPA--D 433 Q++Q++++ +PE+ D+ +++ LS E EKL +P TI + G++PA D Sbjct: 547 MQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAASQISGITPAALD 606 Query: 434 ITALFL 451 I +++ Sbjct: 607 ILQIYI 612 >gi|2494737|sp|Q20680|YT32_CAEEL HYPOTHETICAL 71.7 KD PROTEIN F52H3.2 IN CHROMOSOME II >gi|7503983|pir||T22518 hypothetical protein F52H3.2 - Caenorhabditis elegans >gi|3877390|emb|CAA91322.1| (Z66512) similar to glucose inhibited division protein [Caenorhabditis elegans] Length = 638 Frame 2 hits (HSPs): ________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | | | 638 0 150 300 450 600 __________________ Annotated Domains: PFAM GIDA: Glucose inhibited division protein 17..631 PRODOM PD003738: GIDA(14) 18..628 PROSITE GIDA_1: Glucose inhibited division prote 283..297 PROSITE GIDA_2: Glucose inhibited division prote 377..400 __________________ Plus Strand HSPs: Score = 99 (34.8 bits), Expect = 0.044, P = 0.043 Identities = 27/99 (27%), Positives = 52/99 (52%), Frame = +2 Query: 158 QYEILDKHDFG----DKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLD 325 +Y+ LDK D DK++ E ++I+ +Y+ R +++ Q++ + +P++ D Sbjct: 525 RYD-LDKSDLELCLKDKNIGEDILERLKIEGRYQMEHERMKAKKQEIDRESATAIPDNTD 583 Query: 326 YYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADITAL 445 + M +SLE EKL + RP+ + G++P I L Sbjct: 584 FSTMRGMSLECIEKLERARPRNLAAATRISGITPEAIVVL 623 >gi|3915337|sp|O13670|Y079_SCHPO HYPOTHETICAL 74.2 KD PROTEIN PI079 >gi|7490577|pir||T40172 Glucose inhibited division protein a - fission yeast (Schizosaccharomyces pombe) >gi|2257569|dbj|BAA21461.1| (AB004539) HYPOTHETICAL 75.4KD PROTEIN IN HAP2-ADE 5,6 INTERGENIC REGION [Schizosaccharomyces pombe] >gi|3417432|emb|CAA20319.1| (AL031262) Strong similarity to Glucose inhibited division protein a [Schizosaccharomyces pombe] Length = 666 Frame 2 hits (HSPs): _______ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | | | 666 0 150 300 450 600 __________________ Annotated Domains: PFAM GIDA: Glucose inhibited division protein 17..639 PRODOM PD003738: GIDA(14) 19..633 PRODOM PD129955: Y079_SCHPO 635..665 PROSITE GIDA_1: Glucose inhibited division prote 290..304 PROSITE GIDA_2: Glucose inhibited division prote 386..409 __________________ Plus Strand HSPs: Score = 96 (33.8 bits), Expect = 0.12, P = 0.12 Identities = 25/73 (34%), Positives = 37/73 (50%), Frame = +2 Query: 230 IDIKYEGFILRQQSQLQQLVAKQHRP-LPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXA 406 I+ KY +I RQ +Q +QL + +P D D+ + ++S E L +RP TIGQ Sbjct: 559 IEGKYTYYIKRQGTQNKQLNCRDESTVIPSDFDFDTLHSVSAEELMLLKTIRPATIGQLK 618 Query: 407 N*VGLSPADITAL 445 G+ P I L Sbjct: 619 RIQGIKPGTIIRL 631 >gi|3900934|emb|CAA10141.1| (AJ012715) Pet100 protein [Candida albicans] Length = 76 Frame 2 hits (HSPs): _____________________________________ __________________________________________________ Database sequence: | | | | | 76 0 20 40 60 Plus Strand HSPs: Score = 62 (21.8 bits), Expect = 3.2, P = 0.96 Identities = 19/55 (34%), Positives = 28/55 (50%), Frame = +2 Query: 116 DFSTLESLLKKPH-IQYEILDKHDFGDKSLSRMEKECVEIDIKYEGFILRQQSQL 277 D STL + K+PH IQ EI + R+E++ E+ I E F QQ ++ Sbjct: 20 DPSTLNQIPKEPHEIQAEIARIKRVRLEKRKRLEEKARELGISEEDFEEEQQQEI 74 >gi|160045|gb|AAA63420.1| (M63819) malaria antigen [Plasmodium falciparum] Length = 80 Frame 2 hits (HSPs): _______________________________________ __________________________________________________ Database sequence: | | | | | 80 0 20 40 60 Plus Strand HSPs: Score = 59 (20.8 bits), Expect = 7.1, P = 1.0 Identities = 19/62 (30%), Positives = 36/62 (58%), Frame = +2 Query: 125 TLESLLKKPHIQYEILDKHDFGDKSLSRMEK-ECVEID-IKYE-GFILRQQSQLQQLVAK 295 T+E + K +E LD+ D K L+++ K E +I+ KYE G ++ +++Q+++ Sbjct: 11 TIEKINKSKSWFFEELDEID---KPLAKLRKREKTQINKTKYERGDVIIDNTEIQKIIRD 67 Query: 296 QHRPL 310 H L Sbjct: 68 YHETL 72 >gi|1742415|dbj|BAA15130.1| (D90789) Outer membrane protein C precursor (PORIN). [Escherichia coli] Length = 69 Frame 2 hits (HSPs): ___________________________________________ __________________________________________________ Database sequence: | | | | | 69 0 20 40 60 Plus Strand HSPs: Score = 59 (20.8 bits), Expect = 7.1, P = 1.0 Identities = 20/58 (34%), Positives = 31/58 (53%), Frame = +2 Query: 41 RLKSVRIS-GGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFGDKSLSRM 211 +LK V + G LAA V + + KD + L+ K ++Y DK D GDK+ +R+ Sbjct: 2 KLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARL 59 Parameters: filter=none matrix=BLOSUM62 V=50 B=50 E=10 gi H=1 sort_by_pvalue echofilter ctxfactor=5.98 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H Std. 0 BLOSUM62 0.318 0.135 0.401 +3 0 BLOSUM62 0.318 0.135 0.401 0.352 0.152 0.529 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +2 0 BLOSUM62 0.318 0.135 0.401 0.319 0.137 0.379 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +1 0 BLOSUM62 0.318 0.135 0.401 0.372 0.164 0.647 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -1 0 BLOSUM62 0.318 0.135 0.401 0.357 0.158 0.565 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -2 0 BLOSUM62 0.318 0.135 0.401 0.350 0.150 0.523 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -3 0 BLOSUM62 0.318 0.135 0.401 0.346 0.151 0.513 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +3 0 151 150 10. 73 3 12 22 0.092 34 30 0.12 36 +2 0 152 150 10. 73 3 12 22 0.092 34 30 0.12 36 +1 0 152 151 10. 73 3 12 22 0.093 34 30 0.12 36 -1 0 152 151 10. 73 3 12 22 0.093 34 30 0.12 36 -2 0 152 150 10. 73 3 12 22 0.092 34 30 0.12 36 -3 0 151 151 10. 73 3 12 22 0.093 34 30 0.12 36 Statistics: Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr Title: nr Release date: unknown Posted date: 8:50 PM CDT May 27, 2000 Format: BLAST # of letters in database: 158,518,215 # of sequences in database: 505,245 # of database sequences satisfying E: 44 No. of states in DFA: 592 (58 KB) Total size of DFA: 177 KB (192 KB) Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00 No. of threads or processors used: 4 Search cpu time: 202.21u 1.28s 203.49t Elapsed: 00:01:03 Total cpu time: 202.29u 1.34s 203.63t Elapsed: 00:01:03 Start: Wed Feb 14 23:12:46 2001 End: Wed Feb 14 23:13:49 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000