R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|4733959|gb|AAD28643.1|AC007294_2 (AC007294) GIDA-like protein [Arabidopsis
thaliana]
Length = 723
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 723
0 150 300 450 600
Plus Strand HSPs:
Score = 548 (192.9 bits), Expect = 5.1e-52, P = 5.1e-52
Identities = 108/151 (71%), Positives = 134/151 (88%), Frame = +2
Query: 5 QDKRARISEEKKRLKSVRISG--GDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDK 178
Q+K+ARISEEKKRLK+V+IS GDLAAEV+++S QPVK+ +TLESLLKKPHI Y++L+K
Sbjct: 534 QEKQARISEEKKRLKTVKISVAVGDLAAEVSSVSSQPVKESATLESLLKKPHIHYKLLEK 593
Query: 179 HDFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEA 358
H FG+++LSRMEK+CVEIDIKYEGFI+RQQ+QLQQ+V +QHR LP+DLDYY+MTTLS E
Sbjct: 594 HGFGNETLSRMEKDCVEIDIKYEGFIVRQQNQLQQMVHQQHRRLPDDLDYYSMTTLSHEG 653
Query: 359 REKLPKVRPQTIGQXAN*VGLSPADITALFL 451
REKL KVRP+TIGQ + G+SPADITAL +
Sbjct: 654 REKLSKVRPETIGQASRVGGVSPADITALLI 684
>gi|2494736|sp|Q55694|GIDA_SYNY3 GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443706|pir||S76371 hypothetical protein - Synechocystis sp.
(strain PCC 6803) >gi|1001595|dbj|BAA10223.1| (D64000) glucose
inhibited division protein A [Synechocystis sp.]
Length = 635
Frame 2 hits (HSPs): ____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 635
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 14..54
BLOCKS BL01280B: Glucose inhibited division pro 73..124
BLOCKS BL01280C: Glucose inhibited division pro 144..194
BLOCKS BL01280D: Glucose inhibited division pro 203..219
BLOCKS BL01280E: Glucose inhibited division pro 246..278
BLOCKS BL01280F: Glucose inhibited division pro 280..307
BLOCKS BL01280G: Glucose inhibited division pro 352..398
BLOCKS BL01280H: Glucose inhibited division pro 424..470
BLOCKS BL01280I: Glucose inhibited division pro 576..622
PFAM GIDA: Glucose inhibited division protein 13..629
PRODOM PD003738: GIDA(14) 13..625
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 399..406
PROSITE GIDA_1: Glucose inhibited division prote 280..294
PROSITE GIDA_2: Glucose inhibited division prote 375..398
__________________
Plus Strand HSPs:
Score = 297 (104.5 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 65/150 (43%), Positives = 93/150 (62%), Frame = +2
Query: 5 QDKRARISEEKKRLKSVRISGGD-LAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181
Q K+A I+ EK+RL S RI D + E+ + + Q +K L LL++P Y L+K
Sbjct: 474 QTKQANITAEKERLYSTRIKEQDAVGKEIVDYTQQKIKGSIVLAELLRRPGFHYPDLEKF 533
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361
G++ L EK VEI+IKY G+I RQQ+Q++Q+ + LP L+Y A+ TLS+EAR
Sbjct: 534 QLGNEELKPEEKTSVEIEIKYSGYIKRQQTQIEQVSRHSQKRLPPGLNYMAIETLSMEAR 593
Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451
EKL + +P TIGQ G++PADI AL +
Sbjct: 594 EKLTQFQPLTIGQAGRIGGVNPADINALLV 623
>gi|7674053|sp|Q9WYA1|GIDA_THEMA GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443705|pir||F72400 glucose-inhibited division protein A -
Thermotoga maritima (strain MSB8)
>gi|4980759|gb|AAD35351.1|AE001708_19 (AE001708) glucose-inhibited
division protein A [Thermotoga maritima]
Length = 629
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 629
0 150 300 450 600
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 54/144 (37%), Positives = 87/144 (60%), Frame = +2
Query: 20 RISEEKKRLKSVRISGGDLAAEV-TNLSGQPVKDFSTLESLLKKPHIQY---EILDKHDF 187
RI+EE +RLK V + D ++ T+L P+K+ + LLK+P + Y + LD +
Sbjct: 479 RINEEIERLKKVIVKPSDRVNDLLTSLRTSPLKEPVSFYQLLKRPQLSYSALKFLDPNPI 538
Query: 188 GDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREK 367
D + E VEI++KYEG+I + ++ ++ +P DLDY A+ LS EAR+K
Sbjct: 539 DDPEVV----EQVEINVKYEGYIQKMFEEVAVFEKYENYEIPHDLDYDAVPNLSTEARDK 594
Query: 368 LPKVRPQTIGQXAN*VGLSPADITALFL 451
L K+RP++IGQ G++P+DI+ L +
Sbjct: 595 LKKIRPRSIGQAMRIPGINPSDISNLII 622
>gi|121187|sp|P25812|GIDA_BACSU GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|279710|pir||BWBSGA glucose-inhibited division protein gidA -
Bacillus subtilis >gi|40026|emb|CAA44404.1| (X62539) homologous to
E.coli gidA [Bacillus subtilis] >gi|467385|dbj|BAA05231.1| (D26185)
unknown [Bacillus subtilis] >gi|2636648|emb|CAB16138.1| (Z99124)
glucose-inhibited division protein [Bacillus subtilis]
Length = 628
Frame 2 hits (HSPs): ____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 628
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 9..49
BLOCKS BL01280B: Glucose inhibited division pro 68..119
BLOCKS BL01280C: Glucose inhibited division pro 138..188
BLOCKS BL01280D: Glucose inhibited division pro 197..213
BLOCKS BL01280E: Glucose inhibited division pro 239..271
BLOCKS BL01280F: Glucose inhibited division pro 273..300
BLOCKS BL01280G: Glucose inhibited division pro 345..391
BLOCKS BL01280H: Glucose inhibited division pro 417..463
BLOCKS BL01280I: Glucose inhibited division pro 569..615
DOMO DM02963: GIDAPROTEIN 5..162
DOMO DM01921: GIDAPROTEIN 164..628
PFAM GIDA: Glucose inhibited division protein 8..622
PRODOM PD003738: GIDA(14) 8..618
PROSITE GIDA_1: Glucose inhibited division prote 273..287
PROSITE GIDA_2: Glucose inhibited division prote 368..391
__________________
Plus Strand HSPs:
Score = 225 (79.2 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 52/150 (34%), Positives = 87/150 (58%), Frame = +2
Query: 5 QDKRARISEEKKRLKSVRISGGDLAAE-VTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181
+ K+A I EKKRL SV I E + +L G +KD L+K+P + YE + K
Sbjct: 467 EKKKAAIEAEKKRLHSVIIKPSPENQEYIRSLGGSELKDGVRGTDLMKRPEMNYETVTKL 526
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361
+ + + E VEI +KYEG+I + Q+++L +++ +P+ +DY A+ ++ EAR
Sbjct: 527 APPEVPVPQDVAEQVEIQVKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEAR 586
Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451
+KL VRP ++ Q + G++PADI+ L +
Sbjct: 587 QKLKNVRPLSVAQASRISGVNPADISILLV 616
>gi|121189|sp|P25756|GIDA_PSEPU GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|279709|pir||BWPSAP gidA protein - Pseudomonas putida
>gi|581463|emb|CAA44419.1| (X62540) homologous to E.coli gidA
[Pseudomonas putida]
Length = 630
Frame 2 hits (HSPs): ____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 630
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 8..48
BLOCKS BL01280B: Glucose inhibited division pro 67..118
BLOCKS BL01280C: Glucose inhibited division pro 137..187
BLOCKS BL01280D: Glucose inhibited division pro 196..212
BLOCKS BL01280E: Glucose inhibited division pro 239..271
BLOCKS BL01280F: Glucose inhibited division pro 273..300
BLOCKS BL01280G: Glucose inhibited division pro 345..391
BLOCKS BL01280H: Glucose inhibited division pro 417..463
BLOCKS BL01280I: Glucose inhibited division pro 568..614
DOMO DM02963: GIDAPROTEIN 4..161
DOMO DM01921: GIDAPROTEIN 163..630
PFAM GIDA: Glucose inhibited division protein 7..621
PRODOM PD003738: GIDA(14) 7..618
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 50..57
PROSITE GIDA_1: Glucose inhibited division prote 273..287
PROSITE GIDA_2: Glucose inhibited division prote 368..391
__________________
Plus Strand HSPs:
Score = 204 (71.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 52/147 (35%), Positives = 82/147 (55%), Frame = +2
Query: 11 KRARISEEKKRLKSVRISGG-DLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDF 187
KR I E++RLKS + + + + G P+ +L +LL +P I Y L +
Sbjct: 469 KRDGIEREEQRLKSTWVRPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEAT- 527
Query: 188 GDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREK 367
G +++ E VEI KY G+I RQQ ++ +L A + LP D+DY ++ LS E + K
Sbjct: 528 GGEAIDPQVAEQVEIRTKYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGK 587
Query: 368 LPKVRPQTIGQXAN*VGLSPADITALFL 451
L + RPQT+GQ + G++PA I+ L +
Sbjct: 588 LSQTRPQTLGQASRIPGVTPAAISLLLI 615
>gi|7674051|sp|O84506|GIDA_CHLTR GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443703|pir||H71503 probable fad-dependent oxidoreductase -
Chlamydia trachomatis (serotype D, strain UW3/Cx)
>gi|3328935|gb|AAC68099.1| (AE001323) FAD-dependent oxidoreductase
[Chlamydia trachomatis]
Length = 610
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | || 610
0 150 300 450 600
Plus Strand HSPs:
Score = 202 (71.1 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 52/149 (34%), Positives = 82/149 (55%), Frame = +2
Query: 5 QDKRARISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHD 184
Q+++A I +EK+RL GD +T + +P + L L + P D D
Sbjct: 468 QEQKACIEQEKERLSKTFRKYGDTVVPLTKVLCRPEVSYQQL--LTEFP------ADVRD 519
Query: 185 FGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEARE 364
G + +E++IKY G+I RQQ+ ++ + ++ +PED+DY++++ LSLEARE
Sbjct: 520 LGP-----VVGASLEMEIKYSGYISRQQTLIRSMERSENISIPEDIDYHSISALSLEARE 574
Query: 365 KLPKVRPQTIGQXAN*VGLSPADITALFL 451
KL K P+TIG A G+S ADI L +
Sbjct: 575 KLSKFTPRTIGSAARISGISVADIQVLMV 603
>gi|2851497|sp|P17112|GIDA_ECOLI GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7429007|pir||BVECQA glucose inhibited division protein -
Escherichia coli >gi|2367273|gb|AAC76764.1| (AE000451)
glucose-inhibited division; chromosome replication? [Escherichia
coli]
Length = 629
Frame 2 hits (HSPs): ____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 629
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 8..48
BLOCKS BL01280B: Glucose inhibited division pro 67..118
BLOCKS BL01280C: Glucose inhibited division pro 137..187
BLOCKS BL01280D: Glucose inhibited division pro 196..212
BLOCKS BL01280E: Glucose inhibited division pro 239..271
BLOCKS BL01280F: Glucose inhibited division pro 273..300
BLOCKS BL01280G: Glucose inhibited division pro 345..391
BLOCKS BL01280H: Glucose inhibited division pro 417..463
BLOCKS BL01280I: Glucose inhibited division pro 570..616
DOMO DM02963: GIDAPROTEIN 4..161
DOMO DM01921: GIDAPROTEIN 163..628
PFAM GIDA: Glucose inhibited division protein 7..623
PRODOM PD003738: GIDA(14) 7..620
PROSITE GIDA_1: Glucose inhibited division prote 273..287
PROSITE GIDA_2: Glucose inhibited division prote 368..391
__________________
Plus Strand HSPs:
Score = 200 (70.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 51/150 (34%), Positives = 81/150 (54%), Frame = +2
Query: 8 DKRARISEEKKRLKSVRIS-GGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDK-H 181
+K I E++RLKS ++ + AAEV P+ ++ E LL++P + YE L
Sbjct: 468 EKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLT 527
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361
F E VEI +KYEG+I RQQ ++++ + ++ LP LDY ++ LS E
Sbjct: 528 PFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVI 587
Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451
KL +P +IGQ + G++PA I+ L +
Sbjct: 588 AKLNDHKPASIGQASRISGVTPAAISILLV 617
>gi|7190812|gb|AAF39588.1| (AE002346) glucose inhibited division protein A
[Chlamydia muridarum]
Length = 610
Frame 2 hits (HSPs): __ __________
__________________________________________________
Database sequence: | | | | || 610
0 150 300 450 600
Plus Strand HSPs:
Score = 184 (64.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 40/109 (36%), Positives = 66/109 (60%), Frame = +2
Query: 128 LESLLKKPHIQYE-ILDKHDFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHR 304
L +L +P + Y+ +L + K + +E++IKY G+I RQQ+ ++ + ++
Sbjct: 495 LTKILCRPEVSYQQLLTEFPEDVKDWGPIIGASLEMEIKYSGYISRQQTLIRSMEKAENT 554
Query: 305 PLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADITALFL 451
+PE +DY++++ LSLEAREKL K P+TIG A G+S ADI L +
Sbjct: 555 LIPEGIDYHSISALSLEAREKLSKFTPRTIGSAARISGISVADIQVLMV 603
Score = 38 (13.4 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 8/12 (66%), Positives = 10/12 (83%), Frame = +2
Query: 68 GDLAAEVTNLSG 103
G + AEVT+LSG
Sbjct: 68 GGVMAEVTDLSG 79
>gi|1707903|sp|P53362|GIDA_BORBU GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|1200212|emb|CAA78149.1| (Z12160) gidA [Borrelia burgdorferi]
>gi|2689170|emb|CAA06005.1| (AJ003222) glucose inhibited division
protein A [Borrelia burgdorferi]
Length = 621
Frame 2 hits (HSPs): ____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 621
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 4..44
BLOCKS BL01280B: Glucose inhibited division pro 63..114
BLOCKS BL01280C: Glucose inhibited division pro 135..185
BLOCKS BL01280D: Glucose inhibited division pro 194..210
BLOCKS BL01280E: Glucose inhibited division pro 236..268
BLOCKS BL01280F: Glucose inhibited division pro 270..297
BLOCKS BL01280G: Glucose inhibited division pro 342..388
BLOCKS BL01280H: Glucose inhibited division pro 414..460
BLOCKS BL01280I: Glucose inhibited division pro 559..605
DOMO DM02963: GIDAPROTEIN 1..159
DOMO DM01921: GIDAPROTEIN 161..621
PFAM GIDA: Glucose inhibited division protein 3..612
PRODOM PD003738: GIDA(14) 3..609
PROSITE GIDA_1: Glucose inhibited division prote 270..284
PROSITE GIDA_2: Glucose inhibited division prote 365..388
__________________
Plus Strand HSPs:
Score = 194 (68.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 55/147 (37%), Positives = 80/147 (54%), Frame = +2
Query: 11 KRARISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFG 190
K +R+ E K+ LK R+S D+ E L KDF +LK P I + L K D
Sbjct: 466 KESRVEEIKELLKQRRLSLKDVVDE--QLKKHVSKDFY---HILKDPSISLDNLIKID-P 519
Query: 191 DKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKL 370
S S++ E VE+D+KYEG+I RQ+ +++L + LP D +Y + LS EAREK
Sbjct: 520 SLSDSKVILEQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKF 579
Query: 371 PKVRPQTIGQXAN*VGLSPADITALFL 451
K++P T+ Q + G+ DIT L +
Sbjct: 580 SKIQPATLAQASRIPGIRSTDITVLLI 606
>gi|2494733|sp|P94613|GIDA_COXBU GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|1780760|emb|CAA71459.1| (Y10436) orf627; translated orf
similarity to SWISS-PROT: GIDA_ECOLI and GIDA_PSEPU glucose
inhibited division protein A of E.coli and Pseudomonas putida
[Coxiella burnetii]
Length = 627
Frame 2 hits (HSPs): _____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 627
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 9..49
BLOCKS BL01280B: Glucose inhibited division pro 68..119
BLOCKS BL01280C: Glucose inhibited division pro 138..188
BLOCKS BL01280D: Glucose inhibited division pro 197..213
BLOCKS BL01280E: Glucose inhibited division pro 240..272
BLOCKS BL01280F: Glucose inhibited division pro 274..301
BLOCKS BL01280G: Glucose inhibited division pro 346..392
BLOCKS BL01280H: Glucose inhibited division pro 418..464
BLOCKS BL01280I: Glucose inhibited division pro 571..617
PFAM GIDA: Glucose inhibited division protein 8..624
PRODOM PD003738: GIDA(14) 8..623
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 51..58
PROSITE GIDA_1: Glucose inhibited division prote 274..288
PROSITE GIDA_2: Glucose inhibited division prote 369..392
__________________
Plus Strand HSPs:
Score = 194 (68.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 48/149 (32%), Positives = 81/149 (54%), Frame = +2
Query: 11 KRARISEEKKRLKSVRISGGDLAAEVTNLSGQPV--KDFSTLESLLKKPHIQYEILDK-H 181
K+ I +E++RLK RI A+ Q + +D+S ++ LL++P I Y L +
Sbjct: 470 KKETIEKEQQRLKKQRIWPKSTVAKAIESRFQQLLERDYSAMD-LLRRPEINYPALMQIE 528
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361
+ G L E ++I KYEG++ Q +++ + Q +P LDY +T LS E R
Sbjct: 529 ELGPAVLEPSVAEQIDIQAKYEGYLTHQLAEIARQKKYQTAQIPSSLDYNQVTGLSNEVR 588
Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451
+KL + +P T+GQ + G++PA I+ L +
Sbjct: 589 QKLNETKPTTLGQASRIPGITPAAISLLLV 618
>gi|7443701|pir||B70122 glucose-inhibited division protein A (gidA) - Lyme
disease spirochete >gi|2688059|gb|AAC66557.1| (AE001128) glucose
inhibited division protein A (gidA) [Borrelia burgdorferi]
Length = 627
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 627
0 150 300 450 600
Plus Strand HSPs:
Score = 194 (68.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 55/147 (37%), Positives = 80/147 (54%), Frame = +2
Query: 11 KRARISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFG 190
K +R+ E K+ LK R+S D+ E L KDF +LK P I + L K D
Sbjct: 472 KESRVEEIKELLKQRRLSLKDVVDE--QLKKHVSKDFY---HILKDPSISLDNLIKID-P 525
Query: 191 DKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKL 370
S S++ E VE+D+KYEG+I RQ+ +++L + LP D +Y + LS EAREK
Sbjct: 526 SLSDSKVILEQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKF 585
Query: 371 PKVRPQTIGQXAN*VGLSPADITALFL 451
K++P T+ Q + G+ DIT L +
Sbjct: 586 SKIQPATLAQASRIPGIRSTDITVLLI 612
>gi|1169896|sp|P44763|GIDA_HAEIN GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|1074129|pir||I64078 gidA protein - Haemophilus influenzae
(strain Rd KW20) >gi|1573570|gb|AAC22240.1| (U32739) glucose
inhibited division protein (gidA) [Haemophilus influenzae Rd]
Length = 629
Frame 2 hits (HSPs): ____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 629
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 8..48
BLOCKS BL01280B: Glucose inhibited division pro 67..118
BLOCKS BL01280C: Glucose inhibited division pro 137..187
BLOCKS BL01280D: Glucose inhibited division pro 196..212
BLOCKS BL01280E: Glucose inhibited division pro 239..271
BLOCKS BL01280F: Glucose inhibited division pro 273..300
BLOCKS BL01280G: Glucose inhibited division pro 345..391
BLOCKS BL01280H: Glucose inhibited division pro 417..463
BLOCKS BL01280I: Glucose inhibited division pro 570..616
PFAM GIDA: Glucose inhibited division protein 7..623
PRODOM PD003738: GIDA(14) 7..620
PROSITE GIDA_1: Glucose inhibited division prote 273..287
PROSITE GIDA_2: Glucose inhibited division prote 368..391
__________________
Plus Strand HSPs:
Score = 190 (66.9 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 46/149 (30%), Positives = 83/149 (55%), Frame = +2
Query: 11 KRARISEEKKRLKSVRISG-GDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDF 187
K I +E++RL+S+ + + E + G P+ ++ E LL++P + Y+IL
Sbjct: 469 KMENIEQERQRLRSIWLHPRSEYLEEANKVLGSPLVREASGEDLLRRPEMTYDILTSLTP 528
Query: 188 GDKSLSRMEK-ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEARE 364
++ E E VEI IKY+G+I QQ ++++ ++ +P + DY ++ LS E R
Sbjct: 529 YKPAMEDKEAVEQVEIAIKYQGYIEHQQEEIEKQKRHENTAIPANFDYSKVSGLSNEVRA 588
Query: 365 KLPKVRPQTIGQXAN*VGLSPADITALFL 451
KL + RP +IGQ + G++PA I+ + +
Sbjct: 589 KLEQHRPVSIGQASRISGITPAAISIILV 617
>gi|43257|emb|CAA25773.1| (X01631) gidA protein [Escherichia coli]
>gi|290590|gb|AAA62093.1| (L10328) glucose inhibited division
protein [Escherichia coli]
Length = 628
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 628
0 150 300 450 600
Plus Strand HSPs:
Score = 189 (66.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 51/149 (34%), Positives = 80/149 (53%), Frame = +2
Query: 8 DKRARISEEKKRLKSVRIS-GGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDK-H 181
+K I E++RLKS ++ + AAEV P+ ++ E LL+ P + YE L
Sbjct: 468 EKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLR-PEMTYEKLTTLT 526
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361
F E VEI +KYEG+I RQQ ++++ + ++ LP LDY ++ LS E
Sbjct: 527 PFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVI 586
Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451
KL +P +IGQ + G++PA I+ L +
Sbjct: 587 AKLNDHKPASIGQASRISGVTPAAISILLV 616
>gi|7674055|sp|Q9Z7T7|GIDA_CHLPN GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443704|pir||E72056 fad-dependent oxidoreductase - Chlamydia
pneumoniae (strain CWL029) >gi|4376914|gb|AAD18756.1| (AE001646)
FAD-dependent oxidoreductase [Chlamydophila pneumoniae]
>gi|7189065|gb|AAF38013.1| (AE002174) glucose inhibited division
protein A [Chlamydophila pneumoniae AR39]
Length = 611
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | || 611
0 150 300 450 600
Plus Strand HSPs:
Score = 186 (65.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 41/110 (37%), Positives = 65/110 (59%), Frame = +2
Query: 125 TLESLLKKPHIQYEILDKHDFGD-KSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQH 301
+L L +P + Y++L + D + L + +E++IKY G+I RQ+ +Q L +
Sbjct: 494 SLAKALSRPEVSYDMLREAFPNDIRDLGAVLNASLEMEIKYSGYIDRQKILIQSLEKAES 553
Query: 302 RPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADITALFL 451
+PEDLDY +T LSLEA+EKL K P+T+G + G++ ADI L +
Sbjct: 554 LLIPEDLDYKQITALSLEAQEKLAKFTPRTLGSASRISGIASADIQVLMI 603
>gi|7225413|gb|AAF40650.1| (AE002376) glucose inhibited division protein A
[Neisseria meningitidis MC58]
Length = 631
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 631
0 150 300 450 600
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 48/151 (31%), Positives = 83/151 (54%), Frame = +2
Query: 8 DKRARISEEKKRLKSVRISGGDLA-AEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHD 184
+KR + E +RLK+ + LA E + GQ + + L LL++P++ Y L +
Sbjct: 471 EKREAVEREIQRLKTTWYTPQKLAEGEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLE 530
Query: 185 --FGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEA 358
++LS E VEI +KY+G+I RQ ++ + LP+ +DY + LS E
Sbjct: 531 GAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEV 590
Query: 359 REKLPKVRPQTIGQXAN*VGLSPADITALFLV 454
++KL + +P+T+GQ + G++PA + AL +V
Sbjct: 591 QQKLNQHKPETVGQASRISGVTPAAV-ALLMV 621
>gi|7378847|emb|CAB83390.1| (AL162752) glucose inhibited division protein A
homolog [Neisseria meningitidis]
Length = 628
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 628
0 150 300 450 600
Plus Strand HSPs:
Score = 181 (63.7 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 48/151 (31%), Positives = 83/151 (54%), Frame = +2
Query: 8 DKRARISEEKKRLKSVRISGGDLAA-EVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHD 184
+KR + E +RLK+ + LA E + GQ + + L LL++P++ Y L +
Sbjct: 468 EKREAVEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLE 527
Query: 185 --FGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEA 358
++LS E VEI +KY+G+I RQ ++ + LP+ +DY + LS E
Sbjct: 528 GAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPDGIDYGKVKGLSAEV 587
Query: 359 REKLPKVRPQTIGQXAN*VGLSPADITALFLV 454
++KL + +P+T+GQ + G++PA + AL +V
Sbjct: 588 QQKLNQHKPETVGQASRISGVTPAAV-ALLMV 618
>gi|3913737|sp|O51879|GIDA_BUCAP GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|2827025|gb|AAC38117.1| (AF008210) putative chromosome
replication protein [Buchnera aphidicola]
Length = 631
Frame 2 hits (HSPs): ____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 631
0 150 300 450 600
__________________
Annotated Domains:
PFAM GIDA: Glucose inhibited division protein 9..625
PRODOM PD003738: GIDA(14) 9..622
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 52..59
PROSITE GIDA_1: Glucose inhibited division prote 275..289
PROSITE GIDA_2: Glucose inhibited division prote 370..393
__________________
Plus Strand HSPs:
Score = 170 (59.8 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 50/150 (33%), Positives = 79/150 (52%), Frame = +2
Query: 8 DKRARISEEKKRLKSVRISGGDLAAEVTNLSGQPV--KDFSTLESLLKKPHIQYEILDKH 181
+K IS EK RLK ++I + + N V K+ + L +LLK+P I YE L
Sbjct: 470 EKVLNISNEKNRLKKIKIYPKSSDSTILNQLFNIVLTKEINIL-NLLKRPEITYENLKYL 528
Query: 182 DFGDKSLSRMEKEC-VEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEA 358
+S +E +E +IKYEG+I RQ ++ + + ++ PL DY + LS EA
Sbjct: 529 KNFKVGISDLEAAGQIENEIKYEGYIKRQLEEINRHLKNENTPLLPTYDYNKIKGLSHEA 588
Query: 359 REKLPKVRPQTIGQXAN*VGLSPADITALFL 451
KL +P ++GQ + G++PA I+ L +
Sbjct: 589 VLKLNDYKPVSVGQASRISGITPATISILLI 619
>gi|7471928|pir||D75569 gidA protein - Deinococcus radiodurans (strain R1)
>gi|6457686|gb|AAF09619.1|AE001866_6 (AE001866) gidA protein
[Deinococcus radiodurans]
Length = 600
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 600
0 150 300 450
Plus Strand HSPs:
Score = 160 (56.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 43/122 (35%), Positives = 70/122 (57%), Frame = +2
Query: 86 VTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFG---DKSLSRMEKECVEIDIKYEGFI 256
+ +LS Q ++ T ++ L++P + + D G L E+E VEI +KY G+I
Sbjct: 471 IKSLSKQRMQG-QTADAWLRRPELS--LADVETLGATLPAELGASEREAVEIRVKYAGYI 527
Query: 257 LRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADI 436
R +SQL+ AK +++ +T LS EAREKL +++PQT+ Q + G+ ADI
Sbjct: 528 ARAESQLRS-EAKARELSLSGVNFAGITALSNEAREKLTRLQPQTVEQASRISGVRHADI 586
Query: 437 TALFL 451
+AL +
Sbjct: 587 SALLV 591
>gi|3913739|sp|O66962|GIDA_AQUAE GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443702|pir||G70366 glucose inhibited division protein A -
Aquifex aeolicus >gi|2983328|gb|AAC06917.1| (AE000706) glucose
inhibited division protein A [Aquifex aeolicus]
Length = 617
Frame 2 hits (HSPs): _______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 617
0 150 300 450 600
__________________
Annotated Domains:
PFAM GIDA: Glucose inhibited division protein 8..617
PRODOM PD003738: GIDA(14) 8..614
PROSITE GIDA_1: Glucose inhibited division prote 280..294
__________________
Plus Strand HSPs:
Score = 156 (54.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/79 (43%), Positives = 51/79 (64%), Frame = +2
Query: 215 KECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTI 394
KE VEI +KYE +I R++ ++L + +P D+DY + L+ EAREKL K +P T+
Sbjct: 533 KEEVEIQLKYEPYIERERKLNEKLKKLEDTKIPPDIDYDKIPGLTKEAREKLKKFKPITV 592
Query: 395 GQXAN*VGLSPADITALFL 451
GQ + G++PA ITAL +
Sbjct: 593 GQASRIDGITPAAITALLV 611
>gi|7657947|emb|CAB89205.1| (AJ277593) putative glucose inhibited division
protein A [Thermus thermophilus]
Length = 596
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 596
0 150 300 450
Plus Strand HSPs:
Score = 150 (52.8 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 43/137 (31%), Positives = 72/137 (52%), Frame = +2
Query: 35 KKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFGDKSLSRME 214
K+ L+ V +AAE+ L V+ S L+ L++P Y L + + LS E
Sbjct: 453 KEDLERVEAKYRRVAAELRRLQALRVEGVSGLQ-WLRRPENTYRALAERFPPSEPLSPEE 511
Query: 215 KECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTI 394
VE+ KY G+I RQ+ +++ + +PE +D+ + LS EA EKL + RP+++
Sbjct: 512 AYQVEVRAKYAGYIERQERLREKMKDLEAFRIPEGMDFPKVPGLSREAAEKLSRHRPKSL 571
Query: 395 GQXAN*VGLSPADITAL 445
+ A G+ +D+TAL
Sbjct: 572 AEAARIPGVRDSDLTAL 588
>gi|7674054|sp|Q9XBF8|GIDA_CAUCR GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|5174778|gb|AAD40695.1| (U87804) GidA [Caulobacter crescentus]
Length = 618
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 618
0 150 300 450 600
Plus Strand HSPs:
Score = 149 (52.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 32/77 (41%), Positives = 48/77 (62%), Frame = +2
Query: 215 KECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTI 394
+E +EI+ Y G++ RQ++ + L + LP DLDY + +LS E R KL +VRP T+
Sbjct: 532 REQIEIEAAYAGYLDRQRADAESLRKDEDLRLPADLDYAEIGSLSNEVRGKLARVRPLTL 591
Query: 395 GQXAN*VGLSPADITAL 445
GQ A G++P +TAL
Sbjct: 592 GQAARIEGVTPGALTAL 608
>gi|5731953|emb|CAB52589.1| (AJ245515) glucose inhibited division protein A,
putative [Sweet potato little leaf phytoplasma]
Length = 183
Frame 2 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | | 183
0 50 100 150
Plus Strand HSPs:
Score = 136 (47.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/132 (27%), Positives = 72/132 (54%), Frame = +2
Query: 5 QDKRARISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHD 184
++K+ +I+ K++L + + L N + + +L LLK+ ++ +IL+
Sbjct: 58 KNKQMQINYLKEKLHNFYLDADSLYKFNINSDSRRI----SLYQLLKRSDLKEDILNNFF 113
Query: 185 FGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEARE 364
S+ +E+ V I IKYE +IL+ + ++++ + + +P ++DY + LS EA+E
Sbjct: 114 ASQYSVDVLEQ--VGIQIKYEDYILKSEKEVKKNSHLEEKVIPNNIDYKIIKNLSQEAKE 171
Query: 365 KLPKVRPQTIGQ 400
KL K++P I Q
Sbjct: 172 KLTKIKPFNIAQ 183
>gi|7109686|gb|AAF36757.1| (L35043) glucose inhibited division protein A
[Mycoplasma gallisepticum]
Length = 611
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | || 611
0 150 300 450 600
Plus Strand HSPs:
Score = 143 (50.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 37/110 (33%), Positives = 64/110 (58%), Frame = +2
Query: 116 DFSTLESLLKKPHIQY-EILD--KHDFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQL 286
+FS E LK+P I+ E+L + D+ + L ++ +EI +KYEG+I ++ + L
Sbjct: 494 NFSLYE-FLKRPEIKLIELLKLIEFDYSNYDLELLKN--IEITVKYEGYIKKESRLVNSL 550
Query: 287 VAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADITAL 445
+ +P+DL Y + LS+EA +KL K++P + Q G++ ADI +L
Sbjct: 551 KNLESIKIPQDLIYDKVQNLSIEAIDKLNKIKPLNLAQAQRISGINLADIISL 603
>gi|6016130|sp|O83084|GIDA_TREPA GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443700|pir||C71374 probable glucose inhibited division protein
A (gidA) - syphilis spirochete >gi|3322299|gb|AAC65038.1|
(AE001189) glucose inhibited division protein A (gidA) [Treponema
pallidum]
Length = 630
Frame 2 hits (HSPs): __ _______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 630
0 150 300 450 600
__________________
Annotated Domains:
PFAM GIDA: Glucose inhibited division protein 8..630
PRODOM PD003738: GIDA(14) 8..628
PROSITE GIDA_2: Glucose inhibited division prote 377..400
__________________
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 26/76 (34%), Positives = 44/76 (57%), Frame = +2
Query: 218 ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIG 397
+ V ++I+YE +I Q ++ Q+ + +P DY ++ LS+E+R +L VRP TIG
Sbjct: 549 QSVGVEIRYEHYIAAQDQRIAQVEKMEGIKIPAHFDYARISGLSVESRTRLEHVRPDTIG 608
Query: 398 QXAN*VGLSPADITAL 445
Q G+ P+D+ L
Sbjct: 609 QVGRMRGIRPSDVMLL 624
Score = 36 (12.7 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 8/17 (47%), Positives = 12/17 (70%), Frame = +2
Query: 122 STLESLLKKPHIQYEIL 172
S +E+L KK ++EIL
Sbjct: 476 SAVETLQKKMRTKHEIL 492
>gi|94582|pir||S21554 division protein gidA - Lyme disease spirochete
(fragment)
Length = 65
Frame 2 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | | 65
0 20 40 60
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/63 (42%), Positives = 41/63 (65%), Frame = +2
Query: 218 ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIG 397
E VE+D+KYEG+I RQ+ +++L + LP D +Y + LS EAREK K++P T+
Sbjct: 1 EQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGLSREAREKFSKIQPATLA 60
Query: 398 QXA 406
Q +
Sbjct: 61 QAS 63
>gi|6225445|sp|Q9ZE90|GIDA_RICPR GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443699|pir||H71713 glucose inhibited division protein A (gidA)
RP056 - Rickettsia prowazekii >gi|3860626|emb|CAA14527.1|
(AJ235270) GLUCOSE INHIBITED DIVISION PROTEIN A (gidA) [Rickettsia
prowazekii]
Length = 621
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 621
0 150 300 450 600
Plus Strand HSPs:
Score = 138 (48.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 40/154 (25%), Positives = 80/154 (51%), Frame = +2
Query: 8 DKRARISEEK-KRLKSVRISGGDLAAEVTNLS--G-QPVKD--FSTLESLLKKPHIQYEI 169
+KR + +K K ++ ++ +L+ + L+ G Q +D + T+ L K P E
Sbjct: 456 EKRKKFFTKKCKNIEKTKLLLNNLSLTTSKLAKMGIQVAQDGKYKTILDLFKIPSFNVEQ 515
Query: 170 LDKHDFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLS 349
K K + + + I+ KY ++ RQ + + +++ + +P+++DY+ + ++S
Sbjct: 516 AIKIFPILKKQNNNILQLLYIEAKYASYLTRQYADINLFQSEEIQLIPKNIDYFKIPSIS 575
Query: 350 LEAREKLPKVRPQTIGQXAN*VGLSPADITALFL 451
LE +EKL +P TIG G++PA ITA+ +
Sbjct: 576 LEIQEKLSYHKPATIGVARRISGITPASITAIII 609
>gi|2119962|pir||I40083 division protein - Lyme disease spirochete (fragment)
Length = 65
Frame 2 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | | 65
0 20 40 60
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 26/63 (41%), Positives = 41/63 (65%), Frame = +2
Query: 218 ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIG 397
E VE+D+KYEG+I RQ+ +++L + LP D +Y + +S EAREK K++P T+
Sbjct: 1 EQVELDVKYEGYINRQKDLIKRLDNLELVKLPFDFNYEIIEGMSREAREKFSKIQPATLA 60
Query: 398 QXA 406
Q +
Sbjct: 61 QAS 63
>gi|5672641|dbj|BAA82679.1| (AB013492) 77%-identity [Bacillus halodurans]
Length = 579
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 579
0 150 300 450
Plus Strand HSPs:
Score = 132 (46.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 33/107 (30%), Positives = 58/107 (54%), Frame = +2
Query: 8 DKRARISEEKKRLKSVRISGG-DLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH- 181
+K+A+I+ EKKRL+S+ + ++ A + + P+K+ LK+P + YE + K
Sbjct: 468 EKKAQIAAEKKRLESITVKPSKEVNALLEEVGSAPLKEAVQANVFLKRPEVTYEHVAKVI 527
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDL 322
++ LS E VEI IKYEG+I + Q+++ + +P L
Sbjct: 528 PAPEQELSADVAEQVEIQIKYEGYISKMLQQVERAKKMNDKKIPRRL 574
>gi|7674056|sp|Q9ZML9|GIDA_HELPJ GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443707|pir||D71961 glucose inhibited division protein A -
Helicobacter pylori (strain J99) >gi|4154720|gb|AAD05783.1|
(AE001458) GLUCOSE INHIBITED DIVISION PROTEIN A [Helicobacter
pylori J99]
Length = 621
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 621
0 150 300 450 600
Plus Strand HSPs:
Score = 131 (46.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/149 (27%), Positives = 72/149 (48%), Frame = +2
Query: 5 QDKRARISEEKKRLKS-VRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181
+DK+A I E KRLK V ++ + L P+ D SLL + E +
Sbjct: 465 KDKQA-IQENLKRLKECVLTPSKEVLKRLNELGENPINDKMDGVSLLARDSFNLEKMRSF 523
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361
L+ E ++I+ KY +I +Q + ++ + +P+ + + LSLEA
Sbjct: 524 FSFLVPLNERVLEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAV 583
Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451
EKL K RP+++ + + G++PA++ L L
Sbjct: 584 EKLEKFRPKSLFEASEISGITPANLDVLHL 613
>gi|2258459|gb|AAB63296.1| (AF008565) GidA [Helicobacter pylori]
Length = 621
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 621
0 150 300 450 600
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 40/149 (26%), Positives = 70/149 (46%), Frame = +2
Query: 5 QDKRARISEEKKRLKS-VRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181
+DK+ I + KRLK V L + L P+ D SLL + E +
Sbjct: 465 KDKQ-EIQDNLKRLKECVLTPSKKLLKRLNELDENPINDKVNGVSLLARDSFNAEKMRSF 523
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361
L+ E ++I+ KY +I +Q + ++ + +P+ + + LSLEA
Sbjct: 524 FSFLAPLNERVLEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAV 583
Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451
EKL K RP+++ + + G++PA++ L L
Sbjct: 584 EKLEKFRPKSLFEASEISGITPANLDVLHL 613
>gi|2494734|sp|P56138|GIDA_HELPY GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|7443708|pir||E64546 glucose inhibited division protein -
Helicobacter pylori (strain 26695) >gi|2313303|gb|AAD07281.1|
(AE000541) glucose inhibited division protein (gidA) [Helicobacter
pylori 26695]
Length = 621
Frame 2 hits (HSPs): _____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 621
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 6..46
BLOCKS BL01280B: Glucose inhibited division pro 65..116
BLOCKS BL01280C: Glucose inhibited division pro 135..185
BLOCKS BL01280D: Glucose inhibited division pro 194..210
BLOCKS BL01280E: Glucose inhibited division pro 236..268
BLOCKS BL01280F: Glucose inhibited division pro 270..297
BLOCKS BL01280G: Glucose inhibited division pro 342..388
BLOCKS BL01280H: Glucose inhibited division pro 414..460
BLOCKS BL01280I: Glucose inhibited division pro 566..612
PFAM GIDA: Glucose inhibited division protein 5..621
PRODOM PD003738: GIDA(14) 6..619
PROSITE GIDA_1: Glucose inhibited division prote 270..284
PROSITE GIDA_2: Glucose inhibited division prote 365..388
__________________
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/149 (25%), Positives = 72/149 (48%), Frame = +2
Query: 5 QDKRARISEEKKRLKSVRISGG-DLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKH 181
+DK+ I + KRLK ++ ++ + L P+ D SLL + E +
Sbjct: 465 KDKQ-EIQDNLKRLKEYILTPSKEVLKRLDELDENPINDKVDGVSLLARDSFNAEKMRSF 523
Query: 182 DFGDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAR 361
L+ E ++I+ KY +I +Q + ++ + +P+ + + LSLEA
Sbjct: 524 FSFLAPLNERVLEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAV 583
Query: 362 EKLPKVRPQTIGQXAN*VGLSPADITALFL 451
EKL K RP+++ + + G++PA++ L L
Sbjct: 584 EKLEKFRPKSLFEASEISGITPANLDVLHL 613
>gi|6321202 ref|NP_011278.1| Mto1p >gi|1723974|sp|P53070|YGY6_YEAST
HYPOTHETICAL 75.4 KD PROTEIN IN HAP2-ADE5,6 INTERGENIC REGION
>gi|2131633|pir||S64258 hypothetical protein YGL236c - yeast
(Saccharomyces cerevisiae) >gi|1322897|emb|CAA96953.1| (Z72758) ORF
YGL236c [Saccharomyces cerevisiae]
Length = 679
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | 679
0 150 300 450 600
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/77 (35%), Positives = 44/77 (57%), Frame = +2
Query: 224 VEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQX 403
+ I KYE +I++Q ++ A ++ LP+D DY + TLS E + L +V+P TIGQ
Sbjct: 584 INIQGKYEPYIVKQNQFVKAFQADENMLLPQDYDYRQLPTLSTECKLLLNRVQPLTIGQA 643
Query: 404 AN*VGLSPADITALFLV 454
G++ A + L+ V
Sbjct: 644 RRIQGITAAALFELYRV 660
>gi|6912300 ref|NP_036255.1| CGI-02 protein >gi|7674427|sp|Q9Y2Z2|YC02_HUMAN
HYPOTHETICAL PROTEIN CGI-02 >gi|4680645|gb|AAD27712.1|AF132937_1
(AF132937) CGI-02 protein [Homo sapiens]
Length = 618
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 618
0 150 300 450 600
Plus Strand HSPs:
Score = 117 (41.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 29/78 (37%), Positives = 44/78 (56%), Frame = +2
Query: 218 ECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSL--EAREKLPKVRPQT 391
E ++I+ YE + Q +++ + + LP+DLDY + +SL E REKL RPQT
Sbjct: 506 ERLKIEATYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQT 565
Query: 392 IGQXAN*VGLSPADITAL 445
IG + G++PA I L
Sbjct: 566 IGAASRIPGVTPAAIINL 583
>gi|6898986|gb|AAF30444.1|AE002103_9 (AE002103) glucose inhibited division
protein [Ureaplasma urealyticum]
Length = 614
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 614
0 150 300 450 600
Plus Strand HSPs:
Score = 115 (40.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 34/121 (28%), Positives = 62/121 (51%), Frame = +2
Query: 83 EVTNLSGQPVKDFSTLESLLKKPHIQY-EILDKHDFGDKSLSRMEKECVEIDIKYEGFIL 259
++ +L +K S L LK+P I+ ++L + + K V+I +K+EG+I
Sbjct: 485 QIDDLKFTTLKTNSYLIDYLKRPEIKLNDLLIYCPIKIEDEQIINK--VQIQVKFEGYIK 542
Query: 260 RQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADIT 439
Q+ L+QL + L +DY + +SLE +KL K++P + Q + G++ DI
Sbjct: 543 NQEENLKQLKRLNNIKLHAIVDYKEVPNISLETIDKLNKIKPLDLEQASRISGVNLTDIA 602
Query: 440 AL 445
+
Sbjct: 603 MI 604
>gi|7291427|gb|AAF46854.1| (AE003457) CG4610 gene product [Drosophila
melanogaster]
Length = 661
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 661
0 150 300 450 600
Plus Strand HSPs:
Score = 112 (39.4 bits), Expect = 0.00012, P = 0.00012
Identities = 25/86 (29%), Positives = 52/86 (60%), Frame = +2
Query: 188 GDKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMT-TLSLEARE 364
G+++L+ E ++I+ Y F+ QQ ++ + ++ +P D+DY++ + +LS E R+
Sbjct: 567 GERNLA----ERLKIEALYSFFVDEQQRDVEDVRREERLSIPADIDYFSKSLSLSNEERQ 622
Query: 365 KLPKVRPQTIGQXAN*VGLSPADITAL 445
KL ++PQTI + G++P+ I +
Sbjct: 623 KLTLIQPQTIAAASRIQGVTPSTIVRI 649
>gi|1346131|sp|P47619|GIDA_MYCGE GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|1361514|pir||I64241 glucose inhibited division protein A
homolog - Mycoplasma genitalium >gi|3844967|gb|AAC71606.1| (U39719)
glucose-inhibited division protein A (gidA) [Mycoplasma genitalium]
Length = 612
Frame 2 hits (HSPs): _____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 612
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 4..44
BLOCKS BL01280B: Glucose inhibited division pro 63..114
BLOCKS BL01280C: Glucose inhibited division pro 133..183
BLOCKS BL01280D: Glucose inhibited division pro 192..208
BLOCKS BL01280E: Glucose inhibited division pro 236..268
BLOCKS BL01280F: Glucose inhibited division pro 270..297
BLOCKS BL01280G: Glucose inhibited division pro 342..388
BLOCKS BL01280H: Glucose inhibited division pro 414..460
BLOCKS BL01280I: Glucose inhibited division pro 559..605
DOMO DM01921: GIDAPROTEIN 329..612
PFAM GIDA: Glucose inhibited division protein 3..612
PRODOM PD003738: GIDA(14) 3..608
PROSITE GIDA_1: Glucose inhibited division prote 270..284
PROSITE GIDA_2: Glucose inhibited division prote 365..388
__________________
Plus Strand HSPs:
Score = 108 (38.0 bits), Expect = 0.00091, P = 0.00091
Identities = 35/141 (24%), Positives = 62/141 (43%), Frame = +2
Query: 23 ISEEKKRLKSVRISGGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFGDK-S 199
+ +EKK+ + + +V L +L K+ I + L K D +K
Sbjct: 464 LKKEKKKQELISFLKNTQVGKVKALKFTNKNTAQSLYDFNKRSEINLDKLIK-DLPEKYQ 522
Query: 200 LSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKV 379
L + +EI+IKYEG+I + + + L +P DY+ + L+ EA KL
Sbjct: 523 LDSETLKQIEIEIKYEGYIKKNEKYFKGLDKLSKIKIPHTFDYHKVKNLASEAIFKLSNF 582
Query: 380 RPQTIGQXAN*VGLSPADITAL 445
+P + + G++ DI A+
Sbjct: 583 KPSNLAIASQIAGVNFNDIIAI 604
>gi|2494735|sp|P75221|GIDA_MYCPN GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|2146132|pir||S73611 glucose inhibited division protein gidA -
Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1673956|gb|AAB95933.1| (AE000027) Mycoplasma pneumoniae,
glucose inhibited division protein; similar to Swiss-Prot Accession
Number P17112 and P03816, from E. coli
Length = 612
Frame 2 hits (HSPs): ___________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 612
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL01280A: Glucose inhibited division pro 4..44
BLOCKS BL01280B: Glucose inhibited division pro 63..114
BLOCKS BL01280C: Glucose inhibited division pro 133..183
BLOCKS BL01280D: Glucose inhibited division pro 192..208
BLOCKS BL01280E: Glucose inhibited division pro 236..268
BLOCKS BL01280F: Glucose inhibited division pro 270..297
BLOCKS BL01280G: Glucose inhibited division pro 342..388
BLOCKS BL01280H: Glucose inhibited division pro 414..460
BLOCKS BL01280I: Glucose inhibited division pro 559..605
PFAM GIDA: Glucose inhibited division protein 3..612
PRODOM PD003738: GIDA(14) 3..609
PROSITE GIDA_1: Glucose inhibited division prote 270..284
PROSITE GIDA_2: Glucose inhibited division prote 365..388
__________________
Plus Strand HSPs:
Score = 108 (38.0 bits), Expect = 0.00091, P = 0.00091
Identities = 35/126 (27%), Positives = 63/126 (50%), Frame = +2
Query: 68 GDLAAEVTNL--SGQPVKDFSTLESLLKKPHIQYEILDKHDFGDKSLSRMEKECVEIDIK 241
G +AA N + Q + DF T + +K + + + D +SL++ ++IDIK
Sbjct: 483 GQIAALKLNFKNTAQTLFDF-TKRAEIKLVDLVQLLPKRFDLDVQSLNQ-----IDIDIK 536
Query: 242 YEGFILRQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGL 421
Y G+I + + + L +P L+Y+ + L+ EA KL K+RP + + G+
Sbjct: 537 YAGYIKKSEKYFKSLNNLSSVKIPLKLNYHKVPNLASEAIVKLSKIRPTDLSVASQVAGI 596
Query: 422 SPADITAL 445
+ DI A+
Sbjct: 597 NFNDILAI 604
>gi|3122147|sp|O32806|GIDA_LACLC GLUCOSE INHIBITED DIVISION PROTEIN A
>gi|2281305|gb|AAC45494.1| (U80409) glucose inhibited division
protein homolog GidA [Lactococcus lactis subsp. cremoris]
Length = 535
Frame 2 hits (HSPs): ________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 535
0 150 300 450
__________________
Annotated Domains:
PFAM GIDA: Glucose inhibited division protein 11..535
PROSITE GIDA_1: Glucose inhibited division prote 257..271
PROSITE GIDA_2: Glucose inhibited division prote 352..375
__________________
Plus Strand HSPs:
Score = 106 (37.3 bits), Expect = 0.0025, P = 0.0025
Identities = 27/85 (31%), Positives = 42/85 (49%), Frame = +2
Query: 5 QDKRARISEEKKRLKSVRISG-GDLAAEVTNLSGQPVKDFSTLESLLKKPHIQY-EILDK 178
Q K A+ E KRL S ++ D ++ L P+KD T LK+P + Y E++D
Sbjct: 451 QAKMAQFDREMKRLNSEKLKPLPDTQEKLGKLGFGPIKDALTGAEFLKRPEVNYDEVIDF 510
Query: 179 HDFGDKSLSRMEKECVEIDIKYEGF 253
+ + R E +E +I YEG+
Sbjct: 511 IGQAPEVIDRTVSELIETEITYEGY 535
>gi|6968621|emb|CAB73442.1| (AL139077) glucose inhibited division protein A
homolog [Campylobacter jejuni]
Length = 619
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 619
0 150 300 450 600
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.043, P = 0.042
Identities = 29/126 (23%), Positives = 61/126 (48%), Frame = +2
Query: 80 AEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFGDKSLSRMEKECVEIDIKYEGFIL 259
A + +L + L+ ++ + E L K D +++ + + KY +I
Sbjct: 487 AFLESLGEDKISSIVNLQKIVARASFDIEKLKKLDPIFETMDHYSLREILNEAKYYHYIS 546
Query: 260 RQQSQLQQLVAKQHRPLPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPA--D 433
Q++Q++++ +PE+ D+ +++ LS E EKL +P TI + G++PA D
Sbjct: 547 MQKAQVEKMKNLSELKIPENFDFKSVSGLSNEVVEKLNHHKPPTIFAASQISGITPAALD 606
Query: 434 ITALFL 451
I +++
Sbjct: 607 ILQIYI 612
>gi|2494737|sp|Q20680|YT32_CAEEL HYPOTHETICAL 71.7 KD PROTEIN F52H3.2 IN
CHROMOSOME II >gi|7503983|pir||T22518 hypothetical protein F52H3.2
- Caenorhabditis elegans >gi|3877390|emb|CAA91322.1| (Z66512)
similar to glucose inhibited division protein [Caenorhabditis
elegans]
Length = 638
Frame 2 hits (HSPs): ________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 638
0 150 300 450 600
__________________
Annotated Domains:
PFAM GIDA: Glucose inhibited division protein 17..631
PRODOM PD003738: GIDA(14) 18..628
PROSITE GIDA_1: Glucose inhibited division prote 283..297
PROSITE GIDA_2: Glucose inhibited division prote 377..400
__________________
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.044, P = 0.043
Identities = 27/99 (27%), Positives = 52/99 (52%), Frame = +2
Query: 158 QYEILDKHDFG----DKSLSRMEKECVEIDIKYEGFILRQQSQLQQLVAKQHRPLPEDLD 325
+Y+ LDK D DK++ E ++I+ +Y+ R +++ Q++ + +P++ D
Sbjct: 525 RYD-LDKSDLELCLKDKNIGEDILERLKIEGRYQMEHERMKAKKQEIDRESATAIPDNTD 583
Query: 326 YYAMTTLSLEAREKLPKVRPQTIGQXAN*VGLSPADITAL 445
+ M +SLE EKL + RP+ + G++P I L
Sbjct: 584 FSTMRGMSLECIEKLERARPRNLAAATRISGITPEAIVVL 623
>gi|3915337|sp|O13670|Y079_SCHPO HYPOTHETICAL 74.2 KD PROTEIN PI079
>gi|7490577|pir||T40172 Glucose inhibited division protein a -
fission yeast (Schizosaccharomyces pombe)
>gi|2257569|dbj|BAA21461.1| (AB004539) HYPOTHETICAL 75.4KD PROTEIN
IN HAP2-ADE 5,6 INTERGENIC REGION [Schizosaccharomyces pombe]
>gi|3417432|emb|CAA20319.1| (AL031262) Strong similarity to Glucose
inhibited division protein a [Schizosaccharomyces pombe]
Length = 666
Frame 2 hits (HSPs): _______
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 666
0 150 300 450 600
__________________
Annotated Domains:
PFAM GIDA: Glucose inhibited division protein 17..639
PRODOM PD003738: GIDA(14) 19..633
PRODOM PD129955: Y079_SCHPO 635..665
PROSITE GIDA_1: Glucose inhibited division prote 290..304
PROSITE GIDA_2: Glucose inhibited division prote 386..409
__________________
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.12, P = 0.12
Identities = 25/73 (34%), Positives = 37/73 (50%), Frame = +2
Query: 230 IDIKYEGFILRQQSQLQQLVAKQHRP-LPEDLDYYAMTTLSLEAREKLPKVRPQTIGQXA 406
I+ KY +I RQ +Q +QL + +P D D+ + ++S E L +RP TIGQ
Sbjct: 559 IEGKYTYYIKRQGTQNKQLNCRDESTVIPSDFDFDTLHSVSAEELMLLKTIRPATIGQLK 618
Query: 407 N*VGLSPADITAL 445
G+ P I L
Sbjct: 619 RIQGIKPGTIIRL 631
>gi|3900934|emb|CAA10141.1| (AJ012715) Pet100 protein [Candida albicans]
Length = 76
Frame 2 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | | 76
0 20 40 60
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 3.2, P = 0.96
Identities = 19/55 (34%), Positives = 28/55 (50%), Frame = +2
Query: 116 DFSTLESLLKKPH-IQYEILDKHDFGDKSLSRMEKECVEIDIKYEGFILRQQSQL 277
D STL + K+PH IQ EI + R+E++ E+ I E F QQ ++
Sbjct: 20 DPSTLNQIPKEPHEIQAEIARIKRVRLEKRKRLEEKARELGISEEDFEEEQQQEI 74
>gi|160045|gb|AAA63420.1| (M63819) malaria antigen [Plasmodium falciparum]
Length = 80
Frame 2 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | 80
0 20 40 60
Plus Strand HSPs:
Score = 59 (20.8 bits), Expect = 7.1, P = 1.0
Identities = 19/62 (30%), Positives = 36/62 (58%), Frame = +2
Query: 125 TLESLLKKPHIQYEILDKHDFGDKSLSRMEK-ECVEID-IKYE-GFILRQQSQLQQLVAK 295
T+E + K +E LD+ D K L+++ K E +I+ KYE G ++ +++Q+++
Sbjct: 11 TIEKINKSKSWFFEELDEID---KPLAKLRKREKTQINKTKYERGDVIIDNTEIQKIIRD 67
Query: 296 QHRPL 310
H L
Sbjct: 68 YHETL 72
>gi|1742415|dbj|BAA15130.1| (D90789) Outer membrane protein C precursor
(PORIN). [Escherichia coli]
Length = 69
Frame 2 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | | 69
0 20 40 60
Plus Strand HSPs:
Score = 59 (20.8 bits), Expect = 7.1, P = 1.0
Identities = 20/58 (34%), Positives = 31/58 (53%), Frame = +2
Query: 41 RLKSVRIS-GGDLAAEVTNLSGQPVKDFSTLESLLKKPHIQYEILDKHDFGDKSLSRM 211
+LK V + G LAA V + + KD + L+ K ++Y DK D GDK+ +R+
Sbjct: 2 KLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARL 59
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.352 0.152 0.529
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.319 0.137 0.379
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.372 0.164 0.647
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.357 0.158 0.565
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.350 0.150 0.523
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.346 0.151 0.513
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 151 150 10. 73 3 12 22 0.092 34
30 0.12 36
+2 0 152 150 10. 73 3 12 22 0.092 34
30 0.12 36
+1 0 152 151 10. 73 3 12 22 0.093 34
30 0.12 36
-1 0 152 151 10. 73 3 12 22 0.093 34
30 0.12 36
-2 0 152 150 10. 73 3 12 22 0.092 34
30 0.12 36
-3 0 151 151 10. 73 3 12 22 0.093 34
30 0.12 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 8:50 PM CDT May 27, 2000
Format: BLAST
# of letters in database: 158,518,215
# of sequences in database: 505,245
# of database sequences satisfying E: 44
No. of states in DFA: 592 (58 KB)
Total size of DFA: 177 KB (192 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 202.21u 1.28s 203.49t Elapsed: 00:01:03
Total cpu time: 202.29u 1.34s 203.63t Elapsed: 00:01:03
Start: Wed Feb 14 23:12:46 2001 End: Wed Feb 14 23:13:49 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000