BLASTX+BEAUTY Search Results

WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.

BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.

BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract

Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract

processing output:
cycle 1
cycle 2
cycle 3
cycle 4
Repeat sequence:
   SW  perc perc perc  query                position in query    matching repeat         position in  repeat
score  div. del. ins.  sequence             begin  end (left)    repeat   class/family   begin  end (left)  ID

   21   0.0  0.0  0.0  'E05A11_A11_02.ab1'    417  437  (246) +  AT_rich  Low_complexity     1   21    (0)      

Alignments:
21  0.00  0.00  0.00  'E05A11_A11_02.ab1'  417  437  (246)  AT_rich#Low_complexity  1  21  (279)  5

  'E05A11_A11_02.    417 TTAATAATTTTATAATTTTTA 437    
                         vv  vv vvv  v vvv v  
  AT_rich#Low_com      1 AAAAATAAAATAAATAATATA 21

Transitions / transversions = 0.00 (0 / 12)
Gap_init rate = 0.00 (0 / 21), avg. gap size = 0.00 (0 / 0)  

Masked Sequence:
>'E05A11_A11_02.ab1'
TTACGGCCGGGACCCATGGGACACAGAATTTCTGGAGAAACCTATTGAGA
AGAAAATTGATCCGAAAATCAGAGGAAAGATTGCACCCGATTGTTGGAAA
GTCATTAAAGATATCACACAAAGATGTGCGAAGTTGGAGCCAGATGAGCG
ACCAACAATGGGTGAAGTAGAGGTGGAACTTGAGCATGCTCTGTCATTAC
AAGAACAAGCAGATATAGTAAACACCAACGCTGATTATACCTTAATGTCC
AAAACCGTTATATTCCGCCGGATCCATTTTGCTTTGCCCCCCGATTCAGA
TTGAAAAGAATGAAGGAAATTAGATGCCTACAAATCAGTAATGATAGAAA
CCCCGTGCTCCTGTCTATAATTTTTTCTTAGCAAAGGCTTCGCTGGTTCT
CTGACTCTTTTGTTGGNNNNNNNNNNNNNNNNNNNNNCTTGTTAAAGTAC
TTATAGTGCTTTCGAAATACGTTATGTTCCTTACTTTGAATCACTGTGCC
CTTATGTACCCTATTTTCCTCCACCATTATTCCCAACTACCAACCGCAGG
ACCAATCGCCGGTTAGACAGACTGAACCACTGAACTTGGGATACAGTGAT
ACAGATTCTGAACAAAGTATTGAAATCCATAGGTGATTTTATTAGGTAAG
CTGAAATTAAGGGTAGTGTTTTGAGTCAAAAGA

Summary:
==================================================
file name: /repeatmasker/tmp/RM2seq
sequences:            1
total length:       683 bp
GC level:         39.53 %
bases masked:        21 bp (  3.07 %)
==================================================
               number of      length   percentage
               elements*    occupied  of sequence
--------------------------------------------------
SINEs:                0            0 bp     0.00 %
      ALUs            0            0 bp     0.00 %
      MIRs            0            0 bp     0.00 %

LINEs:                0            0 bp     0.00 %
      LINE1           0            0 bp     0.00 %
      LINE2           0            0 bp     0.00 %
      L3/CR1          0            0 bp     0.00 %

LTR elements:         0            0 bp     0.00 %
      MaLRs           0            0 bp     0.00 %
      ERVL            0            0 bp     0.00 %
      ERV_classI      0            0 bp     0.00 %
      ERV_classII     0            0 bp     0.00 %

DNA elements:         0            0 bp     0.00 %
      MER1_type       0            0 bp     0.00 %
      MER2_type       0            0 bp     0.00 %

Unclassified:         0            0 bp     0.00 %

Total interspersed repeats:        0 bp     0.00 %


Small RNA:            0            0 bp     0.00 %

Satellites:           0            0 bp     0.00 %
Simple repeats:       0            0 bp     0.00 %
Low complexity:       1           21 bp     3.07 %
==================================================

* most repeats fragmented by insertions or deletions
  have been counted as one element

The sequence(s) were assumed to be of primate origin.
RepeatMasker version 07/16/2000               default
ProcessRepeats version 07/16/2000
Repbase version 03/31/2000


Reference:  Gish, Warren (1994-1997).  unpublished.
Gish, Warren and David J. States (1993).  Identification of protein coding
regions by database similarity search.  Nat. Genet. 3:266-72.

Notice:  statistical significance is estimated under the assumption that the
equivalent of one entire reading frame in the query sequence codes for protein
and that significant alignments will involve only coding reading frames.

Query=  'E05A11_A11_02.ab1'
        (683 letters)
  Translating both strands of query sequence in all 6 reading frames

Database:  nr
           625,274 sequences; 197,782,623 total letters.


     Observed Numbers of Database Sequences Satisfying
    Various EXPECTation Thresholds (E parameter values)

        Histogram units:      = 3 Sequences     : less than 3 sequences

 EXPECTation Threshold
 (E parameter)
    |
    V   Observed Counts-->
  10000 982 155 |===================================================
   6310 827 125 |=========================================
   3980 702 173 |=========================================================
   2510 529 134 |============================================
   1580 395  96 |================================
   1000 299  87 |=============================
    631 212  58 |===================
    398 154  29 |=========
    251 125  35 |===========
    158  90  16 |=====
    100  74  12 |====
   63.1  62  12 |====
   39.8  50   6 |==
   25.1  44   2 |:
   15.8  42   4 |=
 >>>>>>>>>>>>>>>>>>>>>  Expect = 10.0, Observed = 38  <<<<<<<<<<<<<<<<<
   10.0  38   2 |:
   6.31  36   6 |==
   3.98  30   2 |:
   2.51  28   2 |:
   1.58  26   2 |:
   1.00  24   2 |:
   0.63  22   2 |:
   0.40  20   1 |:
   0.25  19   2 |:
   0.16  17   2 |:
   0.10  15   4 |=
  0.063  11   0 |
  0.040  11   0 |
  0.025  11   4 |=
  0.016   7   2 |:
  0.010   5   2 |:


                                                                     Smallest
                                                                       Sum
                                                     Reading  High  Probability
Sequences producing High-scoring Segment Pairs:        Frame Score  P(N)      N
gi|9796478|gb|AAF98554.1|AF153441_1(AF153441) serine ... +2   299  1.5e-25   1
gi|6175184|gb|AAF04910.1|AC011437_25(AC011437) putati... +2   126  0.00033   1
gi|11346402|pir||T45786receptor-protein kinase-like p... +2   124  0.00059   1
gi|626010|pir||A49332disease resistance protein kinas... +2   109  0.0077    1
gi|8547235|gb|AAF76310.1|AF220603_2(AF220603) LescPth... +2   108  0.0099    1
gi|4539330|emb|CAB38831.1|(AL035679) putative recepto... +2   111  0.011     1
gi|8547228|gb|AAF76304.1|AF220602_2(AF220602) LpimPth... +2   107  0.013     1
gi|9758836|dbj|BAB09508.1|(AB006705) receptor-like pr... +2   111  0.018     1
gi|7488247|pir||T08559protein kinase homolog F19H22.2... +2   111  0.019     1
gi|6498463|dbj|BAA87852.1|(AP000816) Similar to putat... +2   111  0.020     1
gi|7434331|pir||T07412serine/threonine protein kinase... +2   105  0.021     1
gi|8547236|gb|AAF76311.1|AF220603_3(AF220603) LescPth... +2   101  0.066     1
gi|9757856|dbj|BAB08490.1|(AB010073) receptor protein... +2   106  0.067     1
gi|7434330|pir||T07416serine/threonine protein kinase... +2   100  0.083     1
gi|8547239|gb|AAF76314.1|(AF220603) Fen kinase [Lycop... +2   100  0.083     1
gi|8547229|gb|AAF76305.1|AF220602_3(AF220602) LpimPth... +2    99  0.11      1
gi|4567279|gb|AAD23692.1|AC006841_25(AC006841) putati... +2   103  0.15      1
gi|9758225|dbj|BAB08724.1|(AB009056) receptor-protein... +2   102  0.17      1
gi|557882|gb|AAC48932.1|(U13923) putative serine/thre... +2    97  0.17      1
gi|11346432|pir||T45686receptor-like protein kinase h... +2    98  0.26      1
gi|11346415|pir||T49270receptor protein kinase-like -... +2    98  0.43      1
gi|12322736|gb|AAG51360.1|AC012562_21(AC012562) putat... +2    96  0.43      1
gi|5679841|emb|CAB51834.1|(AJ243961) contains eukaryo... +2    97  0.52      1
gi|7488333|pir||T00512serine/threonine-specific prote... +2    96  0.61      1
gi|4587513|gb|AAD25744.1|AC007060_2(AC007060) Contain... +2    95  0.71      1
gi|7488330|pir||T00546serine/threonine-specific prote... +2    94  0.78      1
gi|6554482|gb|AAF16664.1|AC012394_13(AC012394) putati... +2    90  0.81      1
gi|3406615|gb|AAC29427.1|(AF077754) tyrosine kinase p... +2    67  0.90      1
gi|4803956|gb|AAD29828.1|AC006202_6(AC006202) putativ... +2    88  0.98      1
gi|7532412|gb|AAD20910.2|(AC006234) putative LRR rece... +2    90  0.98      1
gi|7486276|pir||T04856hypothetical protein F28A21.50 ... +2    89  0.99      1
gi|7268658|emb|CAB78866.1|(AL161549) putative protein... +2    89  0.99      1
gi|7269844|emb|CAB79703.1|(AL161575) serine/threonine... +2    90  0.991     1
gi|2117808|pir||I51149protein-tyrosine kinase (EC 2.7... +2    64  0.993     1
gi|2160137|gb|AAB60759.1|(AC000375) Similar to Arabid... +2    88  0.996     1
gi|7687911|gb|AAB19353.2|(S43579) pp60c-src [Gallus g... +2    63  0.998     1
gi|2967840|gb|AAC05835.1|(AF052430) c-Src kinase [Xen... +2    85  0.9995    1
gi|7446423|pir||T02728serine/threonine-specific prote... +2    88  0.9997    1

Use the  and  icons to retrieve links to Entrez:
E = Retrieve Entrez links (e.g., Medline abstracts, FASTA-formatted sequence reports).
R = Retrieve links to Related sequences (neighbors).

Use the  icon (if present) to retrieve links to the Sequence Retrieval System (SRS).

Use the  icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .

Use the  icon (if present) to retrieve links to the Protein Data Bank database.


 >gi|9796478|gb|AAF98554.1|AF153441_1  (AF153441) serine threonine kinase homolog
            COK-4 [Phaseolus vulgaris]
            Length = 369

Frame  2 hits (HSPs):                                         ___________ 
                        __________________________________________________
Database sequence:     |                    |                   |         | 369
                       0                  150                 300

  Plus Strand HSPs:

 Score = 299 (105.3 bits), Expect = 1.5e-25, P = 1.5e-25
 Identities = 53/79 (67%), Positives = 68/79 (86%), Frame = +2

Query:    26 EFLEKPIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             E LE P+E++IDP I+GKIAPDCW+V  D+   C K EPDERPT+GEVEV+LEHALS+QE
Sbjct:   283 ECLENPVEERIDPIIKGKIAPDCWQVFVDMMVSCLKYEPDERPTIGEVEVQLEHALSMQE 342

Query:   206 QADIVNTNADYTLMSKTVI 262
             Q+DI N+N++YTL+SKT+I
Sbjct:   343 QSDITNSNSEYTLLSKTII 361


 >gi|6175184|gb|AAF04910.1|AC011437_25  (AC011437) putative protein kinase
            [Arabidopsis thaliana]
            Length = 850

Frame  2 hits (HSPs):                                              ____   
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 850
                       0      150      300      450      600      750

  Plus Strand HSPs:

 Score = 126 (44.4 bits), Expect = 0.00033, P = 0.00033
 Identities = 27/57 (47%), Positives = 34/57 (59%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQAD 214
             +E  IDP ++GKI  +C K   D  ++C      ERPTMG+V   LE AL LQE AD
Sbjct:   742 LEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLEFALQLQETAD 798


 >gi|11346402|pir||T45786  receptor-protein kinase-like protein - Arabidopsis
            thaliana >gi|6572076|emb|CAB63019.1| (AL133452) receptor-protein
            kinase-like protein [Arabidopsis thaliana]
            Length = 895

Frame  2 hits (HSPs):                                             ____    
                        __________________________________________________
Database sequence:     |        |       |        |       |       |        | 895
                       0      150     300      450     600     750

  Plus Strand HSPs:

 Score = 124 (43.7 bits), Expect = 0.00059, P = 0.00059
 Identities = 23/57 (40%), Positives = 37/57 (64%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQAD 214
             +++ +DP ++GKI P+C+K   +   +C   +  ERP+MG+V   LE AL LQE A+
Sbjct:   762 LDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQESAE 818


 >gi|626010|pir||A49332  disease resistance protein kinase (EC 2.7.1.-) Pto -
            tomato >gi|430992|gb|AAC48914.1| (U02271) protein kinase
            [Lycopersicon pimpinellifolium] >gi|1809261|gb|AAB47423.1| (U59315)
            serine/threonine protein kinase Pto [Lycopersicon pimpinellifolium]
            >gi|8547230|gb|AAF76306.1| (AF220602) Pto kinase [Lycopersicon
            pimpinellifolium] >gi|1096879|prf||2112354A Pto gene [Lycopersicon
            esculentum]
            Length = 321

Frame  2 hits (HSPs):                                            _________
Annotated Domains:           _____________________________________________
                        __________________________________________________
Database sequence:     |       |       |       |      |       |       |   | 321
                       0      50     100     150    200     250     300
__________________

Annotated Domains:
   DOMO                 DM00004: PROTEINKINASEDOMAIN             43..302
   Entrez               domain: protein kinase homology #label K 39..317
   PROSITE              PROTEIN_KINASE_ST: Serine/Threonine prot 160..172
__________________


  Plus Strand HSPs:

 Score = 109 (38.4 bits), Expect = 0.0078, P = 0.0077
 Identities = 21/54 (38%), Positives = 34/54 (62%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             +E+ +DP +  KI P+  +   D   +C  L  ++RP+MG+V  +LE+AL LQE
Sbjct:   265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318


 >gi|8547235|gb|AAF76310.1|AF220603_2  (AF220603) LescPth3 [Lycopersicon
            esculentum]
            Length = 319

Frame  2 hits (HSPs):                                            _________
                        __________________________________________________
Database sequence:     |       |       |       |       |       |      |   | 319
                       0      50     100     150     200     250    300

  Plus Strand HSPs:

 Score = 108 (38.0 bits), Expect = 0.010, P = 0.0099
 Identities = 20/54 (37%), Positives = 34/54 (62%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             +E+ +DP +  KI P+  +   +   +C  L  ++RP+MG+V  +LE+AL LQE
Sbjct:   263 LEQMVDPNLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVLWKLEYALRLQE 316


 >gi|4539330|emb|CAB38831.1|  (AL035679) putative receptor-like protein kinase
            (fragment) [Arabidopsis thaliana]
            Length = 573

Frame  2 hits (HSPs):                                        _______      
                        __________________________________________________
Database sequence:     |             |            |            |          | 573
                       0           150          300          450

  Plus Strand HSPs:

 Score = 111 (39.1 bits), Expect = 0.011, P = 0.011
 Identities = 25/64 (39%), Positives = 37/64 (57%), Frame = +2

Query:    17 WDTEFLEKPI-EKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHAL 193
             W  ++  K + EK IDP + G I P+  K   +  ++C +    +RPTMG+V   LE+AL
Sbjct:   435 WAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLEYAL 494

Query:   194 SLQE 205
              LQE
Sbjct:   495 QLQE 498


 >gi|8547228|gb|AAF76304.1|AF220602_2  (AF220602) LpimPth3 [Lycopersicon
            pimpinellifolium]
            Length = 319

Frame  2 hits (HSPs):                                            _________
                        __________________________________________________
Database sequence:     |       |       |       |       |       |      |   | 319
                       0      50     100     150     200     250    300

  Plus Strand HSPs:

 Score = 107 (37.7 bits), Expect = 0.013, P = 0.013
 Identities = 21/54 (38%), Positives = 34/54 (62%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             +E+ IDP +  KI P+  +   +   +C  L  ++RP+MG+V  +LE+AL LQE
Sbjct:   263 LEQIIDPNLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVLWKLEYALRLQE 316


 >gi|9758836|dbj|BAB09508.1|  (AB006705) receptor-like protein kinase
            [Arabidopsis thaliana]
            Length = 829

Frame  2 hits (HSPs):                                            _____    
                        __________________________________________________
Database sequence:     |        |         |        |        |        |    | 829
                       0      150       300      450      600      750

  Plus Strand HSPs:

 Score = 111 (39.1 bits), Expect = 0.018, P = 0.018
 Identities = 25/64 (39%), Positives = 38/64 (59%), Frame = +2

Query:    17 WDTEFLEK-PIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHAL 193
             W  ++ +K  +E  IDP +RGKI PD  +   +  ++C      +RP+MG+V   LE+AL
Sbjct:   697 WAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYAL 756

Query:   194 SLQE 205
              LQE
Sbjct:   757 QLQE 760


 >gi|7488247|pir||T08559  protein kinase homolog F19H22.210 - Arabidopsis
            thaliana >gi|4914423|emb|CAB43626.1| (AL050351) putative
            receptor-like protein kinase [Arabidopsis thaliana]
            >gi|7270894|emb|CAB80574.1| (AL161594) putative receptor-like
            protein kinase [Arabidopsis thaliana]
            Length = 878

Frame  2 hits (HSPs):                                             ____    
                        __________________________________________________
Database sequence:     |        |        |       |        |       |       | 878
                       0      150      300     450      600     750

  Plus Strand HSPs:

 Score = 111 (39.1 bits), Expect = 0.019, P = 0.019
 Identities = 25/64 (39%), Positives = 37/64 (57%), Frame = +2

Query:    17 WDTEFLEKPI-EKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHAL 193
             W  ++  K + EK IDP + G I P+  K   +  ++C +    +RPTMG+V   LE+AL
Sbjct:   740 WAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLEYAL 799

Query:   194 SLQE 205
              LQE
Sbjct:   800 QLQE 803


 >gi|6498463|dbj|BAA87852.1|  (AP000816) Similar to putative Ser/Thr protein
            kinase. (AC004218) [Oryza sativa] >gi|7106536|dbj|BAA92221.1|
            (AP001278) Similar to Arabidopsis thaliana chromosome II BAC F12L6
            genomic sequence, putative protein kinase. (AC004218) [Oryza
            sativa]
            Length = 898

Frame  2 hits (HSPs):                                              ____   
                        __________________________________________________
Database sequence:     |        |       |        |       |       |        | 898
                       0      150     300      450     600     750

  Plus Strand HSPs:

 Score = 111 (39.1 bits), Expect = 0.020, P = 0.020
 Identities = 22/53 (41%), Positives = 30/53 (56%), Frame = +2

Query:    56 IDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQAD 214
             +DP IR +IAP+C     D  ++C      ERPTMG+V   LE A+  Q+  D
Sbjct:   777 VDPAIRDQIAPECLAKFADTAEKCLSENGTERPTMGDVLWNLESAMHFQDAFD 829


 >gi|7434331|pir||T07412  serine/threonine protein kinase (EC 2.7.1.-) pto -
            tomato >gi|1809257|gb|AAB47421.1| (U59316) serine/threonine protein
            kinase Pto [Lycopersicon esculentum] >gi|8547238|gb|AAF76313.1|
            (AF220603) Pto kinase [Lycopersicon esculentum]
            Length = 311

Frame  2 hits (HSPs):                                           __________
                        __________________________________________________
Database sequence:     |       |       |       |       |        |       | | 311
                       0      50     100     150     200      250     300

  Plus Strand HSPs:

 Score = 105 (37.0 bits), Expect = 0.021, P = 0.021
 Identities = 20/54 (37%), Positives = 34/54 (62%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             +E+ +DP +  KI P+  +   +   +C  L  ++RP+MG+V  +LE+AL LQE
Sbjct:   255 LEQIVDPNLADKIRPESLRKFGETAVKCLALSSEDRPSMGDVLWKLEYALRLQE 308


 >gi|8547236|gb|AAF76311.1|AF220603_3  (AF220603) LescPth2 [Lycopersicon
            esculentum]
            Length = 323

Frame  2 hits (HSPs):                                           __________
                        __________________________________________________
Database sequence:     |       |       |       |      |       |       |   | 323
                       0      50     100     150    200     250     300

  Plus Strand HSPs:

 Score = 101 (35.6 bits), Expect = 0.068, P = 0.066
 Identities = 22/64 (34%), Positives = 37/64 (57%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQADIVN 223
             +E+ +DP I  KI P+  ++  +   +C     + RP+MG+V  +LE+AL LQE   I+ 
Sbjct:   262 LEQIVDPTIVAKIRPESLRMFGETAVKCLASSSENRPSMGDVLWKLEYALHLQEP--IIQ 319

Query:   224 TNAD 235
              N +
Sbjct:   320 DNPE 323


 >gi|9757856|dbj|BAB08490.1|  (AB010073) receptor protein kinase-like protein
            [Arabidopsis thaliana]
            Length = 842

Frame  2 hits (HSPs):                                               _____ 
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 842
                       0      150      300      450      600      750

  Plus Strand HSPs:

 Score = 106 (37.3 bits), Expect = 0.069, P = 0.067
 Identities = 26/69 (37%), Positives = 39/69 (56%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQADIVN 223
             +EK IDPKI G I+    +   +  ++C      +RP MG+V   LE+AL LQE +  V+
Sbjct:   755 LEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEASAQVD 814

Query:   224 TNADYTLMS 250
              + D T M+
Sbjct:   815 LSEDKTTMN 823


 >gi|7434330|pir||T07416  serine/threonine protein kinase (EC 2.7.1.-) Fen -
            tomato >gi|1809259|gb|AAB47422.1| (U59318) serine/threonine protein
            kinase Fen [Lycopersicon esculentum]
            Length = 320

Frame  2 hits (HSPs):                                           _________ 
                        __________________________________________________
Database sequence:     |       |       |       |       |      |       |   | 320
                       0      50     100     150     200    250     300

  Plus Strand HSPs:

 Score = 100 (35.2 bits), Expect = 0.087, P = 0.083
 Identities = 20/54 (37%), Positives = 32/54 (59%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             +E+ +DP I  KI P+  ++  +   +C       RP+MG+V  +LE+AL LQE
Sbjct:   259 LEQIVDPAIAAKIRPESLRMFGETAMKCLAPSSKNRPSMGDVLWKLEYALCLQE 312


 >gi|8547239|gb|AAF76314.1|  (AF220603) Fen kinase [Lycopersicon esculentum]
            Length = 320

Frame  2 hits (HSPs):                                           _________ 
                        __________________________________________________
Database sequence:     |       |       |       |       |      |       |   | 320
                       0      50     100     150     200    250     300

  Plus Strand HSPs:

 Score = 100 (35.2 bits), Expect = 0.087, P = 0.083
 Identities = 20/54 (37%), Positives = 32/54 (59%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             +E+ +DP I  KI P+  ++  +   +C       RP+MG+V  +LE+AL LQE
Sbjct:   259 LEQIVDPAIAAKIRPESLRMFGETAMKCLAPSSKNRPSMGDVLWKLEYALCLQE 312


 >gi|8547229|gb|AAF76305.1|AF220602_3  (AF220602) LpimPth2 [Lycopersicon
            pimpinellifolium]
            Length = 323

Frame  2 hits (HSPs):                                           __________
                        __________________________________________________
Database sequence:     |       |       |       |      |       |       |   | 323
                       0      50     100     150    200     250     300

  Plus Strand HSPs:

 Score = 99 (34.8 bits), Expect = 0.11, P = 0.11
 Identities = 22/64 (34%), Positives = 36/64 (56%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQADIVN 223
             +E+ +DP I  KI P+  ++  +    C     + RP+MG+V  +LE+AL LQE   I+ 
Sbjct:   262 LEQIVDPTIVAKIRPESLRMFGETAVNCLASSSENRPSMGDVLWKLEYALRLQEP--IIQ 319

Query:   224 TNAD 235
              N +
Sbjct:   320 DNPE 323


 >gi|4567279|gb|AAD23692.1|AC006841_25  (AC006841) putative protein kinase
            [Arabidopsis thaliana]
            Length = 871

Frame  2 hits (HSPs):                                             ____    
                        __________________________________________________
Database sequence:     |        |        |       |        |       |       | 871
                       0      150      300     450      600     750

  Plus Strand HSPs:

 Score = 103 (36.3 bits), Expect = 0.16, P = 0.15
 Identities = 22/54 (40%), Positives = 32/54 (59%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             +EK IDP + G + P+  K   +  ++C      +RPTMG+V   LE+AL LQE
Sbjct:   749 LEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLEYALQLQE 802


 >gi|9758225|dbj|BAB08724.1|  (AB009056) receptor-protein kinase-like protein
            [Arabidopsis thaliana]
            Length = 824

Frame  2 hits (HSPs):                                             ______  
                        __________________________________________________
Database sequence:     |         |        |        |        |        |    | 824
                       0       150      300      450      600      750

  Plus Strand HSPs:

 Score = 102 (35.9 bits), Expect = 0.19, P = 0.17
 Identities = 24/75 (32%), Positives = 37/75 (49%), Frame = +2

Query:    17 WDTEFLEKP-IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHAL 193
             W  E+  K  +++ +DP I  +I P   K   +  ++C      +RPT+G+V   LEH L
Sbjct:   704 WAIEWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLEHVL 763

Query:   194 SLQEQADIVNTNADY 238
              LQE   +     DY
Sbjct:   764 QLQESGPLNIPEEDY 778


 >gi|557882|gb|AAC48932.1|  (U13923) putative serine/threonine protein kinase;
            similar to product encoded by Lycopersicon pimpinellifolium Pto
            gene, GenBank Accession Number U02271; Fen is a member of the Pto
            gene family >gi|1809263|gb|AAB47424.1| (U59317) serine/threonine
            protein kinase Fen [Lycopersicon pimpinellifolium]
            >gi|8547231|gb|AAF76307.1| (AF220602) Fen kinase [Lycopersicon
            pimpinellifolium] >gi|1096880|prf||2112354B Fen gene [Lycopersicon
            esculentum] >gi|1098334|prf||2115395A Fen gene [Lycopersicon
            esculentum]
            Length = 318

Frame  2 hits (HSPs):                                           _________ 
                        __________________________________________________
Database sequence:     |       |       |       |       |       |       |  | 318
                       0      50     100     150     200     250     300

  Plus Strand HSPs:

 Score = 97 (34.1 bits), Expect = 0.19, P = 0.17
 Identities = 20/54 (37%), Positives = 32/54 (59%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQE 205
             +E+ +DP I  KI P+  ++  +   +C       RP+MG+V  +LE+AL LQE
Sbjct:   257 LEQIVDPTIAAKIRPESLRMFGETAIKCLAPSSKNRPSMGDVLWKLEYALCLQE 310


 >gi|11346432|pir||T45686  receptor-like protein kinase homolog - Arabidopsis
            thaliana >gi|6522608|emb|CAB62020.1| (AL133298) receptor-like
            protein kinase homolog [Arabidopsis thaliana]
            Length = 512

Frame  2 hits (HSPs):                                        _______      
                        __________________________________________________
Database sequence:     |              |              |             |      | 512
                       0            150            300           450

  Plus Strand HSPs:

 Score = 98 (34.5 bits), Expect = 0.30, P = 0.26
 Identities = 22/64 (34%), Positives = 37/64 (57%), Frame = +2

Query:    17 WDTEFLEK-PIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHAL 193
             W  ++ +K  +++ ID  +RG I PD  +   +  ++C      +RP+MG+V   LE+AL
Sbjct:   382 WAMKWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNLEYAL 441

Query:   194 SLQE 205
              LQE
Sbjct:   442 QLQE 445


 >gi|11346415|pir||T49270  receptor protein kinase-like - Arabidopsis thaliana
            >gi|7799017|emb|CAB90956.1| (AL355775) receptor protein kinase-like
            [Arabidopsis thaliana]
            Length = 830

Frame  2 hits (HSPs):                                             ____    
                        __________________________________________________
Database sequence:     |        |         |        |        |        |    | 830
                       0      150       300      450      600      750

  Plus Strand HSPs:

 Score = 98 (34.5 bits), Expect = 0.55, P = 0.43
 Identities = 22/64 (34%), Positives = 37/64 (57%), Frame = +2

Query:    17 WDTEFLEK-PIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHAL 193
             W  ++ +K  +++ ID  +RG I PD  +   +  ++C      +RP+MG+V   LE+AL
Sbjct:   700 WAMKWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNLEYAL 759

Query:   194 SLQE 205
              LQE
Sbjct:   760 QLQE 763


 >gi|12322736|gb|AAG51360.1|AC012562_21  (AC012562) putative protein kinase;
            70907-69052 [Arabidopsis thaliana]
            Length = 557

Frame  2 hits (HSPs):                                      ______         
                        __________________________________________________
Database sequence:     |             |            |             |         | 557
                       0           150          300           450

  Plus Strand HSPs:

 Score = 96 (33.8 bits), Expect = 0.57, P = 0.43
 Identities = 19/58 (32%), Positives = 31/58 (53%), Frame = +2

Query:    17 WDTEFLEKPIEKKI--DPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELE 184
             W   FL       +  DP+++G+      + I DI Q+C ++EP ERPTM  +  +L+
Sbjct:   396 WSRAFLADDCRLSLIMDPQLKGRFPAKAARSIADIAQKCLQVEPSERPTMRNIVDQLK 453


 >gi|5679841|emb|CAB51834.1|  (AJ243961) contains eukaryotic protein kinase
            domain PF|00069 [Oryza sativa]
            Length = 844

Frame  2 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 844
                       0      150      300      450      600      750

  Plus Strand HSPs:

 Score = 97 (34.1 bits), Expect = 0.73, P = 0.52
 Identities = 23/85 (27%), Positives = 44/85 (51%), Frame = +2

Query:    35 EKPIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQAD 214
             ++ ++  +DP++ G  + +  K   +I ++C   +   RP+MGEV   LE+ L L E   
Sbjct:   739 QRSLDAIVDPRLDGDFSSESLKKFGEIAEKCLADDGRSRPSMGEVLWHLEYVLQLHEAYK 798

Query:   215 IVNTNADYTLMSKTVIFRRIHFALP 289
               N + + +  S  + F  + F+LP
Sbjct:   799 RNNVDCE-SFGSSELGFADMSFSLP 822


 >gi|7488333|pir||T00512  serine/threonine-specific protein kinase homolog
            T20D16.17 - Arabidopsis thaliana >gi|2642445|gb|AAB87113.1|
            (AC002391) putative protein kinase [Arabidopsis thaliana]
            Length = 834

Frame  2 hits (HSPs):                                             ____    
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 834
                       0      150      300      450      600      750

  Plus Strand HSPs:

 Score = 96 (33.8 bits), Expect = 0.93, P = 0.61
 Identities = 20/53 (37%), Positives = 33/53 (62%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQ 202
             I++ +DP + G+I  +  K   +I ++C K   DERP+M +V  +LE+ L LQ
Sbjct:   713 IDEILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLEYVLQLQ 765


 >gi|4587513|gb|AAD25744.1|AC007060_2  (AC007060) Contains eukaryotic protein
            kinase domain PF|00069. [Arabidopsis thaliana]
            Length = 849

Frame  2 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 849
                       0      150      300      450      600      750

  Plus Strand HSPs:

 Score = 95 (33.4 bits), Expect = 1.2, P = 0.71
 Identities = 26/89 (29%), Positives = 43/89 (48%), Frame = +2

Query:    35 EKPIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQAD 214
             ++ +E  ID  +RG  +P+  +   +I ++C   E   RP MGEV   LE+ L + E A 
Sbjct:   742 QRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLEYVLQIHE-AW 800

Query:   215 IVNTNADYTLMSKTVIFRRIH-FALPPDSD 301
             +   N + +  S   +      F LP  S+
Sbjct:   801 LRKQNGENSFSSSQAVEEAPESFTLPACSN 830


 >gi|7488330|pir||T00546  serine/threonine-specific protein kinase homolog
            F12L6.2 - Arabidopsis thaliana >gi|3355465|gb|AAC27827.1|
            (AC004218) putative protein kinase [Arabidopsis thaliana]
            Length = 815

Frame  2 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |         |        |        |        |        |    | 815
                       0       150      300      450      600      750

  Plus Strand HSPs:

 Score = 94 (33.1 bits), Expect = 1.5, P = 0.78
 Identities = 25/87 (28%), Positives = 47/87 (54%), Frame = +2

Query:    17 WDTEFLEK-PIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHAL 193
             W  + ++K  +E  IDP + GK+  +  K   ++T++C      ERP MG++   LE  L
Sbjct:   703 WAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNLEFML 762

Query:   194 SLQ---EQADIVNTNADYTLMSKTVIF 265
              +Q   E+A +V+   + +++  T+ F
Sbjct:   763 QVQAKDEKAAMVDDKPEASVVGSTMQF 789


 >gi|6554482|gb|AAF16664.1|AC012394_13  (AC012394) putative protein kinase;
            55222-56801 [Arabidopsis thaliana]
            Length = 381

Frame  2 hits (HSPs):                                         _________   
                        __________________________________________________
Database sequence:     |                   |                   |          | 381
                       0                 150                 300

  Plus Strand HSPs:

 Score = 90 (31.7 bits), Expect = 1.6, P = 0.81
 Identities = 22/62 (35%), Positives = 32/62 (51%), Frame = +2

Query:    17 WDTEFLEKPIEKK----IDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELE 184
             W   +L+ P  KK    +DP +RGK +  C      IT+ C   E + RP +G+V V  E
Sbjct:   292 WARPYLKDP--KKFGLLVDPLLRGKFSKRCLNYAISITEMCLNDEANHRPKIGDVVVAFE 349

Query:   185 HALS 196
             +  S
Sbjct:   350 YIAS 353


 >gi|3406615|gb|AAC29427.1|  (AF077754) tyrosine kinase pp60c-src [Homo sapiens]
            Length = 68

Frame  2 hits (HSPs):   ______________________________________            
                        __________________________________________________
Database sequence:     |             |              |              |      | 68
                       0            20             40             60

  Plus Strand HSPs:

 Score = 67 (23.6 bits), Expect = 2.3, P = 0.90
 Identities = 13/51 (25%), Positives = 28/51 (54%), Frame = +2

Query:    32 LEKPIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELE 184
             + + +  +++   R    P+C + + D+  +C + EP+ERPT   ++  LE
Sbjct:     2 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 52


 >gi|4803956|gb|AAD29828.1|AC006202_6  (AC006202) putative protein kinase
            [Arabidopsis thaliana]
            Length = 486

Frame  2 hits (HSPs):                                             _____   
                        __________________________________________________
Database sequence:     |               |              |               |   | 486
                       0             150            300             450

  Plus Strand HSPs:

 Score = 88 (31.0 bits), Expect = 3.8, P = 0.98
 Identities = 16/45 (35%), Positives = 29/45 (64%), Frame = +2

Query:    35 EKPIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEV 169
             ++ IE+  DP++ GK A +  +++  + + C  L+P+ RPTM EV
Sbjct:   413 KRVIEELPDPRLNGKFAEEEMQIMAYLAKECLLLDPESRPTMREV 457


 >gi|7532412|gb|AAD20910.2|  (AC006234) putative LRR receptor protein kinase
            [Arabidopsis thaliana]
            Length = 743

Frame  2 hits (HSPs):                                                _____
                        __________________________________________________
Database sequence:     |          |         |         |         |         | 743
                       0        150       300       450       600

  Plus Strand HSPs:

 Score = 90 (31.7 bits), Expect = 3.9, P = 0.98
 Identities = 18/66 (27%), Positives = 31/66 (46%), Frame = +2

Query:    44 IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQADIVN 223
             + K +DP ++G           D+  RC + EP+ RP M EV  +L   +  + + +  N
Sbjct:   675 LAKMVDPSLKGDYPAKSLSHFADVISRCVQSEPEYRPLMSEVVQDLSDMIQREHRRNDSN 734

Query:   224 TNADYT 241
              +  YT
Sbjct:   735 GDNQYT 740


 >gi|7486276|pir||T04856  hypothetical protein F28A21.50 - Arabidopsis thaliana
            (fragment) >gi|4539383|emb|CAB37449.1| (AL035526) putative protein
            (fragment) [Arabidopsis thaliana]
            Length = 662

Frame  2 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |           |          |          |           |    | 662
                       0         150        300        450         600

  Plus Strand HSPs:

 Score = 89 (31.3 bits), Expect = 4.4, P = 0.99
 Identities = 20/67 (29%), Positives = 40/67 (59%), Frame = +2

Query:     2 YGR-DPWDTEFLEKP-IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEV 175
             YG  + W +++LEK  + + IDP ++     +  +VI D+ + C K E  +RP+M +V  
Sbjct:   571 YGSIEQWASKYLEKDDLGEMIDPSLK-TFKEEELEVICDVIRECLKTEQRQRPSMKDVAE 629

Query:   176 ELEHALSL 199
             +L+  +++
Sbjct:   630 QLKQVINI 637


 >gi|7268658|emb|CAB78866.1|  (AL161549) putative protein (fragment) [Arabidopsis
            thaliana]
            Length = 685

Frame  2 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |          |          |          |          |      | 685
                       0        150        300        450        600

  Plus Strand HSPs:

 Score = 89 (31.3 bits), Expect = 4.6, P = 0.99
 Identities = 20/67 (29%), Positives = 40/67 (59%), Frame = +2

Query:     2 YGR-DPWDTEFLEKP-IEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEV 175
             YG  + W +++LEK  + + IDP ++     +  +VI D+ + C K E  +RP+M +V  
Sbjct:   594 YGSIEQWASKYLEKDDLGEMIDPSLK-TFKEEELEVICDVIRECLKTEQRQRPSMKDVAE 652

Query:   176 ELEHALSL 199
             +L+  +++
Sbjct:   653 QLKQVINI 660


 >gi|7269844|emb|CAB79703.1|  (AL161575) serine/threonine-specific receptor
            protein kinase-like protein [Arabidopsis thaliana]
            Length = 863

Frame  2 hits (HSPs):                                                 ____
                        __________________________________________________
Database sequence:     |        |        |        |       |        |      | 863
                       0      150      300      450     600      750

  Plus Strand HSPs:

 Score = 90 (31.7 bits), Expect = 4.7, P = 0.99
 Identities = 17/58 (29%), Positives = 32/58 (55%), Frame = +2

Query:    29 FLEKPIEKKIDPKIRGKIAPD-CWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQ 202
             F  + ++  +DP +RG  + D  WK + D+   C + +   RPTM ++  EL+  L+ +
Sbjct:   798 FEARELDGVVDPLLRGDFSQDSAWKFV-DVAMSCVRDKGSNRPTMNQIVAELKQCLAAE 855


 >gi|2117808|pir||I51149  protein-tyrosine kinase (EC 2.7.1.112) src - quail
            >gi|397976|gb|AAA21568.1| (U01148) c-src protein, C terminus
            [Gallus gallus] >gi|397977|gb|AAA21569.1| (U01149) c-src protein, C
            terminus [Coturnix coturnix]
            Length = 68

Frame  2 hits (HSPs):   ______________________________________            
                        __________________________________________________
Database sequence:     |             |              |              |      | 68
                       0            20             40             60

  Plus Strand HSPs:

 Score = 64 (22.5 bits), Expect = 4.9, P = 0.99
 Identities = 12/51 (23%), Positives = 28/51 (54%), Frame = +2

Query:    32 LEKPIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELE 184
             + + +  +++   R    P+C + + D+  +C + +P+ERPT   ++  LE
Sbjct:     2 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 52


 >gi|2160137|gb|AAB60759.1|  (AC000375) Similar to Arabidopsis light repressible
            receptor protein kinase (gb|X97774). [Arabidopsis thaliana]
            Length = 648

Frame  2 hits (HSPs):                                              _____  
                        __________________________________________________
Database sequence:     |           |           |          |           |   | 648
                       0         150         300        450         600

  Plus Strand HSPs:

 Score = 88 (31.0 bits), Expect = 5.6, P = 1.0
 Identities = 19/50 (38%), Positives = 29/50 (58%), Frame = +2

Query:    44 IEKKIDPKIRGKI-APDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHAL 193
             IE  +DP ++GK  +   WKV+ ++   C+KL   ERP M ++  EL   L
Sbjct:   567 IESVMDPNLKGKYDSSSAWKVL-ELAMLCSKLSLAERPNMAQIVHELNEYL 616


 >gi|7687911|gb|AAB19353.2|  (S43579) pp60c-src [Gallus gallus]
            Length = 50

Frame  2 hits (HSPs):    _________________________________                
                        __________________________________________________
Database sequence:     |                   |                   |          | 50
                       0                  20                  40

  Plus Strand HSPs:

 Score = 63 (22.2 bits), Expect = 6.3, P = 1.0
 Identities = 11/33 (33%), Positives = 21/33 (63%), Frame = +2

Query:    86 PDCWKVIKDITQRCAKLEPDERPTMGEVEVELE 184
             P+C + + D+  +C + +P+ERPT   ++  LE
Sbjct:     2 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 34


 >gi|2967840|gb|AAC05835.1|  (AF052430) c-Src kinase [Xenopus laevis]
            Length = 450

Frame  2 hits (HSPs):                                              _______
                        __________________________________________________
Database sequence:     |                |                |                | 450
                       0              150              300

  Plus Strand HSPs:

 Score = 85 (29.9 bits), Expect = 7.6, P = 1.0
 Identities = 19/50 (38%), Positives = 31/50 (62%), Frame = +2

Query:    50 KKIDPKIRG--KI-APD-CWKVIKDITQRCAKLEPDERPTMGEVEVELEH 187
             K++ PK+    K+ APD C  V+ D+ ++C  L+P +RPT   +  +LEH
Sbjct:   393 KEVVPKVENGYKMDAPDGCPPVVYDLMKQCWHLDPKQRPTFRNLREQLEH 442


 >gi|7446423|pir||T02728  serine/threonine-specific protein kinase (EC 2.7.1.-)
            T9I4.4 - Arabidopsis thaliana >gi|3461838|gb|AAC33224.1| (AC005315)
            putative receptor-like protein kinase [Arabidopsis thaliana]
            Length = 879

Frame  2 hits (HSPs):                                               _____ 
                        __________________________________________________
Database sequence:     |        |        |       |        |       |       | 879
                       0      150      300     450      600     750

  Plus Strand HSPs:

 Score = 88 (31.0 bits), Expect = 8.0, P = 1.0
 Identities = 21/63 (33%), Positives = 32/63 (50%), Frame = +2

Query:    17 WDTEFLEK-PIEKKIDPKIRGKIAP-DCWKVIKDITQRCAKLEPDERPTMGEVEVELEHA 190
             W    L K  IE  +DP++     P   WK + +I   C     ++RPTM +V  EL+  
Sbjct:   786 WVGYMLTKGDIENVVDPRLNRDYEPTSVWKAL-EIAMSCVNPSSEKRPTMSQVTNELKQC 844

Query:   191 LSLQ 202
             L+L+
Sbjct:   845 LTLE 848


Parameters:
  filter=none
  matrix=BLOSUM62
  V=50
  B=50
  E=10
  gi
  H=1
  sort_by_pvalue
  echofilter

  ctxfactor=5.99

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   Std.    0   BLOSUM62                                 0.318   0.135   0.401  
   +3      0   BLOSUM62        0.318   0.135   0.401    0.362   0.164   0.610  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +2      0   BLOSUM62        0.318   0.135   0.401    0.336   0.149   0.486  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +1      0   BLOSUM62        0.318   0.135   0.401    0.359   0.161   0.575  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -1      0   BLOSUM62        0.318   0.135   0.401    0.351   0.156   0.560  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -2      0   BLOSUM62        0.318   0.135   0.401    0.351   0.157   0.572  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -3      0   BLOSUM62        0.318   0.135   0.401    0.349   0.153   0.495  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
   +3      0      227       220       10.  77 3  12 22  0.10    35
                                                    32  0.12    38
   +2      0      227       219       10.  77 3  12 22  0.10    35
                                                    32  0.12    38
   +1      0      227       220       10.  77 3  12 22  0.10    35
                                                    32  0.12    38
   -1      0      227       220       10.  77 3  12 22  0.10    35
                                                    32  0.12    38
   -2      0      227       219       10.  77 3  12 22  0.10    35
                                                    32  0.12    38
   -3      0      227       219       10.  77 3  12 22  0.10    35
                                                    32  0.12    38


Statistics:

  Database:  /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
    Title:  nr
    Release date:  unknown
    Posted date:  4:06 PM CST Feb 28, 2001
    Format:  BLAST
  # of letters in database:  197,782,623
  # of sequences in database:  625,274
  # of database sequences satisfying E:  38
  No. of states in DFA:  599 (59 KB)
  Total size of DFA:  233 KB (256 KB)
  Time to generate neighborhood:  0.01u 0.01s 0.02t  Elapsed: 00:00:00
  No. of threads or processors used:  6
  Search cpu time:  217.10u 1.09s 218.19t  Elapsed: 00:00:54
  Total cpu time:  217.11u 1.15s 218.26t  Elapsed: 00:00:54
  Start:  Fri Jan 18 13:09:59 2002   End:  Fri Jan 18 13:10:53 2002


Annotated Domains Database:   March 14, 2000 

Release Date:  March 14, 2000