NIA Mouse Unique Gene Set Version 2

Library Description

Organism:	Mus musculus
Strain:	C57BL/6
Developmental stage:	mixed
Sex:	mixed
Vector:	pSPORT1 (Invitrogen)
Vector type:	plasmid (ampicillin resistant)
Cloning site 1:	SalI
Cloning site 2:	NotI
Lab host:	DH10B

Mouse cDNA project by the Laboratory of Genetics, National Institute on Aging (NIA), Intramural Research Program, NIH (http://lgsun.grc.nia.nih.gov/cDNA). This clone is among a rearrayed set of 11,424 clones from more than 20 cDNA libraries.

Source: Dawood B. Dudekula, National Institute on Aging/National Institutes of Health

Gene Content Analysis

4,104 ESTs from this library were grouped into 2,210 UniGene entries (putative genes) [UniGene build #178, 06-Feb-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs	TPM	UniGene Entry
32	7797	Mm.196110	Hemoglobin alpha, adult chain 1.
20	4873	Mm.476742	Eukaryotic translation elongation factor 1 alpha 1.
17	4142	Mm.185453	Eukaryotic translation initiation factor 4, gamma 2.
16	3899	Mm.288567	Hemoglobin, beta adult major chain.
15	3655	Mm.290774	Heat shock protein 8.
14	3411	Mm.425090	Ribosomal protein S6.
14	3411	Mm.280083	Ribosomal protein L4.
13	3168	Mm.335315	Eukaryotic translation elongation factor 1 alpha 1.
10	2437	Mm.28200	SLU7 splicing factor homolog (S. cerevisiae).
9	2193	Mm.6343	Nucleophosmin 1.
9	2193	Mm.328305	RIKEN cDNA 6530401D17 gene.
8	1949	Mm.426531	Transcribed locus.
8	1949	Mm.282158	Chaperonin containing Tcp1, subunit 5 (epsilon).
7	1706	Mm.78312	WW domain containing E3 ubiquitin protein ligase 1.
7	1706	Mm.4071	Ribosomal protein SA.
7	1706	Mm.399829	Ribosomal protein S3A.
7	1706	Mm.30012	High density lipoprotein (HDL) binding protein.
7	1706	Mm.24652	Family with sequence similarity 115, member A.
7	1706	Mm.237064	Heterogeneous nuclear ribonucleoprotein A1.
7	1706	Mm.23217	Transmembrane protein 33.
7	1706	Mm.1408	Adrenomedullin.
6	1462	Mm.68134	Epithelial stromal interaction 1 (breast).
6	1462	Mm.589	Glucose phosphate isomerase 1.
6	1462	Mm.45044	Serum response factor.
6	1462	Mm.439690	Tubulin, alpha 1A.
6	1462	Mm.402393	Kinesin family member 1B.
6	1462	Mm.3914	Solute carrier family 12, member 1.
6	1462	Mm.38868	Lectin, mannose-binding 2.
6	1462	Mm.379007	Ribosomal protein S6.
6	1462	Mm.331576	Zinc finger, CCHC domain containing 7.
6	1462	Mm.329655	Cofilin 1, non-muscle.
6	1462	Mm.326799	Eukaryotic translation elongation factor 2.
6	1462	Mm.29802	Family with sequence similarity 108, member A.
6	1462	Mm.284446	Aldehyde dehydrogenase 2, mitochondrial.
6	1462	Mm.281744	RIKEN cDNA 4933427D06 gene.
6	1462	Mm.277735	Collagen, type I, alpha 1.
6	1462	Mm.275216	Multiple EGF-like-domains 6.
6	1462	Mm.255877	Poly (A) polymerase alpha.
6	1462	Mm.25559	Serine/threonine kinase 17b (apoptosis-inducing).
6	1462	Mm.250508	Phosphopantothenoylcysteine decarboxylase.
6	1462	Mm.247453	Abhydrolase domain containing 10.
6	1462	Mm.2180	Heat shock protein 90 alpha (cytosolic), class B member 1.
5	1218	Mm.5291	Ribosomal protein S5.
5	1218	Mm.476735	Clathrin, heavy polypeptide (Hc).
5	1218	Mm.46749	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 6.
5	1218	Mm.4668	Myeloperoxidase.
5	1218	Mm.440507	Ribosomal protein L21.
5	1218	Mm.439827	HLA-B-associated transcript 1A.
5	1218	Mm.42203	Kinesin family member 11.
5	1218	Mm.389224	Enabled homolog (Drosophila).
5	1218	Mm.378263	Leucine zipper transcription factor-like 1.
5	1218	Mm.371546	ADP-ribosylation factor 1.
5	1218	Mm.371545	Ribosomal protein, large, P0.
5	1218	Mm.347728	RIKEN cDNA 6720469N11 gene.
5	1218	Mm.30357	Ferritin light chain 1.
5	1218	Mm.290251	Cellular nucleic acid binding protein.
5	1218	Mm.289824	Interleukin 1 receptor-like 1.
5	1218	Mm.28693	Aspartyl-tRNA synthetase.
5	1218	Mm.28128	Brix domain containing 5.
5	1218	Mm.280231	Annexin A7.
5	1218	Mm.279736	Splicing factor 3b, subunit 1.
5	1218	Mm.275831	Aldolase A, fructose-bisphosphate.
5	1218	Mm.252941	FYVE and coiled-coil domain containing 1.
5	1218	Mm.252213	Bromodomain adjacent to zinc finger domain, 2A.
5	1218	Mm.24231	RIKEN cDNA 1110004F10 gene.
5	1218	Mm.240490	Serpine1 mRNA binding protein 1.
5	1218	Mm.23834	YTH domain family 3.
5	1218	Mm.234700	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide.
5	1218	Mm.202749	Dipeptidylpeptidase 8.
5	1218	Mm.196544	Lysyl-tRNA synthetase.
5	1218	Mm.1843	Heat shock protein 90, alpha (cytosolic), class A member 1.
5	1218	Mm.181430	Dynein cytoplasmic 1 heavy chain 1.
5	1218	Mm.154378	Nucleolin.
5	1218	Mm.14802	H19 fetal liver mRNA.
5	1218	Mm.125857	RIKEN cDNA 4933403F05 gene.
4	975	Mm.843	Lymphoid-restricted membrane protein.
4	975	Mm.6712	Desmin.
4	975	Mm.56769	Decorin.
4	975	Mm.5286	Ribosomal protein, large, P0.
4	975	Mm.5088	Ataxia telangiectasia mutated homolog (human).
4	975	Mm.49689	Sarcospan.
4	975	Mm.476835	Cell division cycle 37 homolog (S. cerevisiae)-like 1.
4	975	Mm.442130	Ribosomal protein S12.
4	975	Mm.440164	Hemoglobin Y, beta-like embryonic chain.
4	975	Mm.43745	HLA-B associated transcript 5.
4	975	Mm.42944	S-phase kinase-associated protein 1A.
4	975	Mm.397111	Platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit.
4	975	Mm.39706	Cyclin Y-like 1.
4	975	Mm.396243	Ribosomal protein L3.
4	975	Mm.39487	Sal-like 2 (Drosophila).
4	975	Mm.391081	Expressed sequence AW554918.
4	975	Mm.390057	Nuclear factor of activated T-cells 5.
4	975	Mm.386323	Transcribed locus.
4	975	Mm.38378	Fras1 related extracellular matrix protein 2.
4	975	Mm.38348	Partner and localizer of BRCA2.
4	975	Mm.379939	Transcribed locus, strongly similar to NP_989488.2 eukaryotic translation elongation factor 1 alpha 1 [Gallus gallus].
4	975	Mm.379302	Ribosomal protein L31.
4	975	Mm.379004	Ribosomal protein L7.
4	975	Mm.371997	3-phosphoglycerate dehydrogenase.
4	975	Mm.360075	Eukaryotic translation elongation factor 1 alpha 1.