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Finding cDNAs
UGID:255968     UniGene Mm.622     Mus musculus (mouse)   Supt4h1 Order cDNA clone, Links
Suppressor of Ty 4 homolog 1 (S. cerevisiae) (Supt4h1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001476474.1 PREDICTED: hypothetical protein M. musculus 100.0 116
NP_001099298.2 suppressor of Ty 4 homolog 1 R. norvegicus 100.0 116
XP_001106749.1 PREDICTED: similar to Transcription elongation factor SPT4 1 (DRB sensitivity-inducing factor small subunit 1) (DSIF small subunit 1) M. mulatta 100.0 116
XP_523811.2 PREDICTED: hypothetical protein isoform 4 P. troglodytes 100.0 116
NP_003159.1 suppressor of Ty 4 homolog 1 H. sapiens 100.0 116
XP_853156.1 PREDICTED: similar to Transcription initiation protein SPT4 homolog 1 isoform 1 C. lupus familiaris 100.0 116
XP_001503750.1 PREDICTED: similar to suppressor of Ty 4 homolog 1 E. caballus 100.0 116
NP_001029964.1 suppressor of Ty 4 homolog 1 B. taurus 100.0 116
NP_001089206.1 hypothetical protein LOC734253 X. laevis 98.3 116
NP_610802.1 spt4 D. melanogaster 66.1 112
NP_497135.1 SPT transcription factor family member (spt-4) C. elegans 58.1 105

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mammary gland; prostate; thymus; mixed; brain; testis; heart; eye; kidney; uncharacterized tissue; spleen; muscle; blood; stomach; uterus; bone marrow; intestine; ovary; extraembryonic tissue; thyroid; joint; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11 C|11 49.0 cM
UniSTS entry: Chr 11 RH125346
UniSTS entry: Chr 11 (n/a)
UniSTS entry: Chr 11 (n/a)
UniSTS entry: Chr 10 Supt4h
UniSTS entry: (n/a)
UniSTS entry: (n/a)
UniSTS entry: (n/a)
UniSTS entry: (n/a)
UniSTS entry: D10Mit157.2
UniSTS entry: (n/a)
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AK002990.1 Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710005G07 product:suppressor of Ty 4 homolog (S. cerevisiae), full insert sequence P
BC057949.1 Mus musculus suppressor of Ty 4 homolog 1 (S. cerevisiae), mRNA (cDNA clone IMAGE:5343741), with apparent retained intron PA
BC061174.1 Mus musculus suppressor of Ty 4 homolog 1 (S. cerevisiae), mRNA (cDNA clone MGC:74311 IMAGE:6592996), complete cds PA
BC087923.1 Mus musculus suppressor of Ty 4 homolog 1 (S. cerevisiae), mRNA (cDNA clone MGC:107273 IMAGE:30308013), complete cds PA
AK146235.1 Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730038A02 product:suppressor of Ty 4 homolog (S. cerevisiae), full insert sequence P
AK168229.1 Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730069J19 product:suppressor of Ty 4 homolog (S. cerevisiae), full insert sequence P
AK167941.1 Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730042K05 product:suppressor of Ty 4 homolog (S. cerevisiae), full insert sequence P
BC141092.1 Mus musculus suppressor of Ty 4 homolog 1 (S. cerevisiae), mRNA (cDNA clone MGC:176053 IMAGE:9055704), complete cds P
U43154.1 Mus musculus Supt4h mRNA, complete cds PA
NM_009296.1 Mus musculus suppressor of Ty 4 homolog 1 (S. cerevisiae) (Supt4h1), mRNA P
NM_011509.1 Mus musculus predicted gene, 100041294 (100041294), mRNA P
BC024391.1 Mus musculus suppressor of Ty 4 homolog 1 (S. cerevisiae), mRNA (cDNA clone MGC:36170 IMAGE:5011064), complete cds PA

EST sequences (10 of 210) [Show all sequences]

BY041642.1 Clone I730020A14 thymus 5' read P
BY041647.1 Clone I730020A20 mixed 5' read P
BY043221.1 Clone I730027K16 spleen 5' read P
BY043921.1 Clone I730030I01 thymus 5' read P
BY045512.1 Clone I730038A02 spleen 5' read
BY052384.1 Clone I730069J19 spleen 5' read P
BY054247.1 Clone I730077C09 thymus 5' read P
BY057643.1 Clone I730093F15 mixed 5' read P
BY058448.1 Clone I730096L06 spleen 5' read P
BY091826.1 Clone K630088L16 thymus 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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