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BUILD 129
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SNP linked to Gene C17orf47(geneID:284083) Via Contig Annotation
rs# on all gene models to Batch Query
all rs# to file.

  Gene Model (mRNA alignment) information from genome sequence back to top
Total gene model (contig mRNA transcript): 1
mrnatranscriptproteinmrna orientationContigContig LabelList SNP
NM_001038704.1minus strandNP_001033793.1reverseNT_010783.14reference<- currently shown

Include clinically associated in gene region cSNP has frequency double hit

gene model
(contig mRNA transcript):
Contig LabelContigmrnaproteinmrna orientationtranscriptsnp count
referenceNT_010783.14NM_001038704.1NP_001033793.1reverseminus strand6, coding

Color Legend

Region Contig
position
mRNA
pos
dbSNP rs#
cluster id
Hetero-
zygosity
Validation 3D Clinically
Associated
Function dbSNP
allele
Protein
residue
Codon
pos
Amino acid
pos
PubMed
exon_2152725311772 rs16943091 0.037byClusterbyFreqwithHapMapFreq missenseGGly [G]1546
contig referenceTCys [C]1546
exon_1152734451517 rs17822735 0.309byClusterbyFreqwithHapMapFreq missenseASer [S]1461
contig referenceGGly [G]1461
152737791183 rs17222523 0.317byClusterbyFreq synonymousCHis [H]3349
contig referenceTHis [H]3349
15274145817 rs17222537 0.028byFreq synonymousTHis [H]3227
contig referenceCHis [H]3227
15274564398 rs8071623 0.183byClusterbyFreqwithHapMapFreq missenseAThr [T]188
contig referenceCPro [P]188
15274637325 rs6503867 0.184byClusterbyFreqwithHapMapFreq synonymousGSer [S]363
contig referenceASer [S]363
exon_115274825137start codon1

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Revised: May 25, 2006 1:38 PM .