Superoxide dismutase 2, mitochondrial (sod2)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:104299 UniGene Dr.6314 Danio rerio (zebrafish) sod2

Order cDNA clone, Links

Superoxide dismutase 2, mitochondrial (sod2)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_956270.1	superoxide dismutase 2, mitochondrial precursor	D. rerio	100.0	223
NP_038699.2	superoxide dismutase 2, mitochondrial	M. musculus	87.8	221
NP_000627.2	manganese superoxide dismutase isoform A precursor	H. sapiens	87.7	219
NP_001083968.1	manganese superoxide dismutase	X. laevis	87.0	223
NP_492290.1	SOD (superoxide dismutase) family member (sod-2)	C. elegans	71.8	215
NP_476925.1	superoxide dismutase 2 (Mn)	D. melanogaster	71.5	206
XP_001699077.1	superoxide dismutase [Mn]	C. reinhardtii	66.8	222
NP_187703.1	MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1); manganese superoxide dismutase	A. thaliana	59.4	228
XP_329919.1	hypothetical protein	N. crassa	54.7	211
NP_011872.1	Mitochondrial superoxide dismutase, protects cells against oxygen toxicity; phosphorylated; Sod2p	S. cerevisiae	47.7	215

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	brain; heart; reproductive system; eye; whole body; olfactory rosettes; mixed; uncharacterized tissue; gills; fin; liver

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	20
	UniSTS entry:	Chr 20	fj33b01.x1	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC060895.1	Danio rerio superoxide dismutase 2, mitochondrial, mRNA (cDNA clone MGC:73051 IMAGE:4144057), complete cds	PA
NM_199976.1	Danio rerio superoxide dismutase 2, mitochondrial (sod2), nuclear gene encoding mitochondrial protein, mRNA	PA
AY195857.1	Danio rerio manganese superoxide dismutase mRNA, complete cds	PA

EST sequences (10 of 187) [Show all sequences]

AI353425.1		heart	5' read	P
AW076961.1		brain	3' read	PA
AW077209.1		brain	5' read	P
BE016959.1		fin	5' read	P
BG304790.1	Clone IMAGE:4144057	eye	5' read	P
BG306113.1	Clone IMAGE:4199077	eye	3' read	P
BG307749.1	Clone IMAGE:4199077	eye	5' read	P
BG308450.1	Clone IMAGE:4144080	eye	3' read	P
BI563269.1	Clone IMAGE:4968017	brain	5' read	P
BI534423.1	Clone IMAGE:4968017	brain	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria