Vibrio fischeri ES114 chromosome I

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174278-174377 (1-100) 174378-174477 (101-200) 174478-174577 (201-300) 174578-174677 (301-400) 174678-174777 (401-500)
174778-174877 (501-600) 174878-174977 (601-700) 174978-175077 (701-800) 175078-175177 (801-900) 175178-175277 (901-1000)
[175278-175377 (1001-1100)] 175378-175477 (1101-1200) 175478-175577 (1201-1300) 175578-175677 (1301-1400) 175678-175777 (1401-1500)
175778-175877 (1501-1600) 175878-175977 (1601-1700) 175978-176077 (1701-1800) 176078-176177 (1801-1900) 176178-176277 (1901-2000)
176278-176377 (2001-2100) 176378-176477 (2101-2200) 176478-176577 (2201-2300) 176578-176677 (2301-2400) 176678-176777 (2401-2500)
176778-176852 (2501-2575)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
175278 hypothetical VF1001 hypothetical protein genbank 59711608 YP_204384.1 583 1108295 1110046
175279 hypothetical VF1002 hypothetical protein genbank 59711609 YP_204385.1 141 1110043 1110468
175280 hypothetical VF1003 hypothetical protein genbank 59711610 YP_204386.1 491 1110558 1112033
175281 hypothetical VF1004 hypothetical cytosolic protein genbank 59711611 YP_204387.1 166 1112037 1112537
175282 hypothetical VF1005 Flagellar L-ring protein FlgH genbank 59711612 YP_204388.1 516 1112553 1114103
175283 hypothetical VF1006 hypothetical protein genbank 59711613 YP_204389.1 68 1114326 1114532
175284 hypothetical VF1007 primosomal replication protein N' genbank 59711614 YP_204390.1 183 1114525 1115076
175285 hypothetical VF1008 hypothetical membrane spanning protein genbank 59711615 YP_204391.1 256 1115087 1115857
175286 hypothetical VF1009 ATP-dependent helicase, DinG family genbank 59711616 YP_204392.1 694 1115926 1118010
175287 hypothetical VF1010 hypothetical protein genbank 59711617 YP_204393.1 368 1118447 1119553
175288 hypothetical VF1011 hypothetical protein genbank 59711618 YP_204394.1 352 1120191 1121249
175289 hisG hypothetical VF1012 ATP phosphoribosyltransferase
catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
genbank 59711619 YP_204395.1 298 1121714 1122610
175290 hypothetical VF1013 histidinol dehydrogenase
catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis
genbank 59711620 YP_204396.1 439 1122616 1123935
175291 hypothetical VF1014 histidinol-phosphate aminotransferase
catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
genbank 59711621 YP_204397.1 346 1123945 1124985
175292 hypothetical VF1015 imidazole glycerol-phosphate dehydratase/histidinol phosphatase
catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate
genbank 59711622 YP_204398.1 357 1125223 1126296
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
175293 hypothetical VF1016 imidazole glycerol phosphate synthase subunit HisH
catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamide and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide and glutamate
genbank 59711623 YP_204399.1 204 1126305 1126919
175294 hypothetical VF1017 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
genbank 59711624 YP_204400.1 245 1127034 1127771
175295 hypothetical VF1018 imidazole glycerol phosphate synthase subunit HisF
catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerolphosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts a
genbank 59711625 YP_204401.1 257 1127753 1128526
175296 hypothetical VF1019 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesi
genbank 59711626 YP_204402.1 206 1128523 1129143
175297 hypothetical VF1020 tRNA pseudouridine synthase A genbank 59711627 YP_204403.1 228 1129252 1129938
175298 hypothetical VF1021 methyltransferase genbank 59711628 YP_204404.1 316 1129935 1130885
175299 hypothetical VF1022 hypothetical protein genbank 59711629 YP_204405.1 132 1130959 1131357
175300 hypothetical VF1023 protein YciI genbank 59711630 YP_204406.1 100 1131383 1131685
175301 hypothetical VF1024 acyl-CoA hydrolase genbank 59711631 YP_204407.1 143 1131790 1132221
175302 hypothetical VF1025 putative intracellular septation protein
Involved in cell division; probably involved in intracellular septation
genbank 59711632 YP_204408.1 181 1132294 1132839
175303 hypothetical VF1026 proton glutamate symport protein genbank 59711633 YP_204409.1 418 1133009 1134265
175304 trpA hypothetical VF1027 tryptophan synthase subunit alpha
converts serine and 1-(indol-3-yl)glycerol 3-phosphate to tryptophan and glyceraldehyde 3-phosphate; functions in trytophan synthesis from chorismate; forms a tetramer of alpha(2)beta(2)
genbank 59711634 YP_204410.1 268 1134546 1135352
175305 hypothetical VF1028 tryptophan synthase subunit beta
catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
genbank 59711635 YP_204411.1 396 1135352 1136542
175306 hypothetical VF1029 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase
monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate
genbank 59711636 YP_204412.1 470 1136553 1137965
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
175307 hypothetical VF1030 anthranilate phosphoribosyltransferase genbank 59711637 YP_204413.1 184 1137970 1138524
175308 hypothetical VF1031 anthranilate phosphoribosyltransferase genbank 59711638 YP_204414.1 170 1138464 1138976
175309 hypothetical VF1032 anthranilate synthase component II
catalyzes the formation of anthranilate and glutamate from chorismate and glutamine
genbank 59711639 YP_204415.1 200 1138987 1139589
175310 hypothetical VF1033 anthranilate synthase component I
catalyzes the formation of anthranilate and glutamate from chorismate and glutamine
genbank 59711640 YP_204416.1 291 1139589 1140464
175311 hypothetical VF1034 PHP domain containing protein (TRPH) genbank 59711641 YP_204417.1 279 1141601 1142440
175312 hypothetical VF1035 Sua5/YciO/YrdC/YwlC family protein genbank 59711642 YP_204418.1 206 1142514 1143134
175313 hypothetical VF1036 autoinducer regulatory protein AinR genbank 59711643 YP_204419.1 819 1143189 1145648
175314 hypothetical VF1037 autoinducer synthase AinS genbank 59711644 YP_204420.1 380 1145660 1146802
175315 hypothetical VF1038 ribosomal large subunit pseudouridine synthase B genbank 59711645 YP_204421.1 354 1147183 1148247
175316 hypothetical VF1039 short chain dehydrogenase genbank 59711646 YP_204422.1 246 1148332 1149072
175317 hypothetical VF1040 possible protease SohB genbank 59711647 YP_204423.1 353 1149236 1150297
175318 hypothetical VF1041 hypothetical protein genbank 59711648 YP_204424.1 138 1150664 1151080
175319 hypothetical VF1042 hypothetical protein genbank 59711649 YP_204425.1 326 1151171 1152151
175320 hypothetical VF1043 hypothetical protein genbank 59711650 YP_204426.1 386 1152318 1153478
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
175321 hypothetical VF1044 RNA-directed DNA polymerase genbank 59711651 YP_204427.1 395 1153921 1155108
175322 hypothetical VF1045 hypothetical protein genbank 59711652 YP_204428.1 241 1155098 1155823
175323 hypothetical VF1046 hypothetical protein genbank 59711653 YP_204429.1 196 1155934 1156524
175324 hypothetical VF1047 hypothetical protein genbank 59711654 YP_204430.1 156 1156657 1157127
175325 hypothetical VF1048 hypothetical protein genbank 59711655 YP_204431.1 172 1158432 1158950
175326 hypothetical VF1049 putative DNA methylase genbank 59711656 YP_204432.1 285 1159028 1159885
175327 hypothetical VF1050 Protein YciN genbank 59711657 YP_204433.1 81 1160337 1160582
175328 hypothetical VF1051 DNA topoisomerase I
catalyzes the ATP-dependent breakage of signle-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
genbank 59711658 YP_204434.1 876 1161017 1163647
175329 hypothetical VF1052 transporter, divalent anion:sodium symporter family genbank 59711659 YP_204435.1 486 1163795 1165255
175330 hypothetical VF1053 sensory transduction protein kinase genbank 59711660 YP_204436.1 446 1165259 1166599
175331 hypothetical VF1054 hypothetical protein genbank 59711661 YP_204437.1 157 1166586 1167059
175332 hypothetical VF1055 D-lactate dehydrogenase
Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes
genbank 59711662 YP_204438.1 331 1167110 1168105
175333 hypothetical VF1056 phosphoglucomutase
phosphomannomutase
genbank 59711663 YP_204439.1 569 1168354 1170063
175334 hypothetical VF1057 lysine exporter protein genbank 59711664 YP_204440.1 211 1170109 1170744
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
175335 hypothetical VF1058 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase
genbank 59711665 YP_204441.1 204 1170914 1171528
175336 hypothetical VF1059 basic endochitinase genbank 59711666 YP_204442.1 555 1171809 1173476
175337 hypothetical VF1060 peptidase T
catalyzes the release of the N-terminal amino acid from a tripeptide
genbank 59711667 YP_204443.1 409 1173642 1174871
175338 hypothetical VF1061 anaerobic C4-dicarboxylate transporter genbank 59711668 YP_204444.1 455 1174874 1176241
175339 hypothetical VF1062 adenylosuccinate synthetase genbank 59711669 YP_204445.1 418 1176332 1177588
175340 hypothetical VF1063 transcriptional regulator genbank 59711670 YP_204446.1 298 1177718 1178614
175341 hypothetical VF1064 glutamate decarboxylase genbank 59711671 YP_204447.1 464 1178890 1180284
175342 hypothetical VF1065 integral membrane protein with TrkA domains genbank 59711672 YP_204448.1 625 1180375 1182252
175343 hypothetical VF1066 transcriptional regulators, LysR family genbank 59711673 YP_204449.1 300 1182263 1183165
175344 hypothetical VF1067 transporter genbank 59711674 YP_204450.1 130 1183318 1183710
175345 hypothetical VF1068 pirin genbank 59711675 YP_204451.1 288 1183720 1184586
175346 hypothetical VF1069 hypothetical protein genbank 59711676 YP_204452.1 65 1184617 1184814
175347 hypothetical VF1070 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase genbank 59711677 YP_204453.1 492 1184962 1186440
175348 hypothetical VF1071 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase genbank 59711678 YP_204454.1 532 1186465 1188063
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
175349 hypothetical VF1072 transcriptional regulators, LysR family genbank 59711679 YP_204455.1 312 1188228 1189166
175350 hypothetical VF1073 hypothetical protein genbank 59711680 YP_204456.1 317 1189141 1190094
175351 hypothetical VF1074 transcriptional regulator, AraC family genbank 59711681 YP_204457.1 273 1190184 1191005
175352 hypothetical VF1075 transporter, LysE family genbank 59711682 YP_204458.1 200 1191008 1191610
175353 hypothetical VF1076 sulfite-dehydrogenase genbank 59711683 YP_204459.1 213 1191620 1192261
175354 hypothetical VF1077 NirV precursor genbank 59711684 YP_204460.1 252 1192275 1193033
175355 hypothetical VF1078 hypothetical protein genbank 59711685 YP_204461.1 134 1193030 1193434
175356 hypothetical VF1079 hypothetical protein genbank 59711686 YP_204462.1 219 1193407 1194066
175357 hypothetical VF1080 hypothetical protein genbank 59711687 YP_204463.1 157 1194251 1194724
175358 hypothetical VF1081 transcriptional regulator, TetR family genbank 59711688 YP_204464.1 194 1194818 1195402
175359 hypothetical VF1082 glutathione S-transferase genbank 59711689 YP_204465.1 230 1195547 1196239
175360 hypothetical VF1083 glutathione S-transferase genbank 59711690 YP_204466.1 286 1196284 1197144
175361 hypothetical VF1084 branched-chain amino acid transport system carrier protein genbank 59711691 YP_204467.1 441 1197578 1198903
175362 hypothetical VF1085 hypothetical protein genbank 59711692 YP_204468.1 218 1198980 1199636
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
175363 hypothetical VF1086 hypothetical protein genbank 59711693 YP_204469.1 285 1199931 1200788
175364 hypothetical VF1087 hypothetical protein genbank 59711694 YP_204470.1 159 1200779 1201258
175365 hypothetical VF1088 anaerobic C4-dicarboxylate transporter
functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB
genbank 59711695 YP_204471.1 437 1201531 1202844
175366 hypothetical VF1089 immunogenic protein genbank 59711696 YP_204472.1 310 1203087 1204019
175367 hypothetical VF1090 transporter genbank 59711697 YP_204473.1 636 1204106 1206016
175368 hypothetical VF1091 methyl-accepting chemotaxis protein genbank 59711698 YP_204474.1 524 1206090 1207664
175369 hypothetical VF1092 toxin corregulated pilus biosynthesis protein I genbank 59711699 YP_204475.1 668 1207990 1209996
175370 hypothetical VF1093 glutamate-gated potassium channel genbank 59711700 YP_204476.1 366 1210387 1211487
175371 hypothetical VF1094 SAM-dependent methyltransferase genbank 59711701 YP_204477.1 233 1211576 1212277
175372 hypothetical VF1095 transcriptional regulators, LysR family genbank 59711702 YP_204478.1 311 1212339 1213274
175373 hypothetical VF1096 nucleoside permease NupC genbank 59711703 YP_204479.1 401 1213545 1214750
175374 hypothetical VF1097 BAX protein genbank 59711704 YP_204480.1 302 1214891 1215799
175375 hypothetical VF1098 peptidyl-prolyl cis-trans isomerase genbank 59711705 YP_204481.1 179 1215945 1216484
175376 hypothetical VF1099 beta-lactamase genbank 59711706 YP_204482.1 283 1216453 1217304
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
175377 hypothetical VF1100 D-cysteine desulfhydrase homolog genbank 59711707 YP_204483.1 262 1217355 1218143


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UCRL-WEB-219375