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BUILD 129
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SNP linked to Gene PIGW(geneID:284098) Via Contig Annotation
rs# on all gene models to Batch Query
all rs# to file.

  Gene Model (mRNA alignment) information from genome sequence back to top
Total gene model (contig mRNA transcript): 1
mrnatranscriptproteinmrna orientationContigContig LabelList SNP
NM_178517.3plus strandNP_848612.2forwardNT_078100.1reference<- currently shown

Include clinically associated in gene region cSNP has frequency double hit

gene model
(contig mRNA transcript):
Contig LabelContigmrnaproteinmrna orientationtranscriptsnp count
referenceNT_078100.1NM_178517.3NP_848612.2forwardplus strand4, coding

Color Legend

Region Contig
position
mRNA
pos
dbSNP rs#
cluster id
Hetero-
zygosity
Validation 3D Clinically
Associated
Function dbSNP
allele
Protein
residue
Codon
pos
Amino acid
pos
PubMed
exon_116710356start codon1
exon_2167710663 rs12952744 N.D.withHapMapFreq nonsenseA [Ter[*]]2203
contig referenceTLeu [L]2203
167721674 rs36149024 N.D. frame shiftGGly [G]1207
contig reference-1207
167725678 rs36126803 N.D. missenseGArg [R]2208
contig referenceCPro [P]2208
167870823 rs35139532 N.D. synonymousCPhe [F]3256
contig referenceTPhe [F]3256

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Revised: May 25, 2006 1:38 PM .