Xylella fastidiosa 9a5c

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178039-178138 (1-100) 178139-178238 (101-200) 178239-178338 (201-300) 178339-178438 (301-400) [178439-178538 (401-500)]
178539-178638 (501-600) 178639-178738 (601-700) 178739-178838 (701-800) 178839-178938 (801-900) 178939-179038 (901-1000)
179039-179138 (1001-1100) 179139-179238 (1101-1200) 179239-179338 (1201-1300) 179339-179438 (1301-1400) 179439-179538 (1401-1500)
179539-179638 (1501-1600) 179639-179738 (1601-1700) 179739-179838 (1701-1800) 179839-179938 (1801-1900) 179939-180038 (1901-2000)
180039-180138 (2001-2100) 180139-180238 (2101-2200) 180239-180338 (2201-2300) 180339-180438 (2301-2400) 180439-180538 (2401-2500)
180539-180638 (2501-2600) 180639-180738 (2601-2700) 180739-180804 (2701-2766)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178439 hypothetical XF0404 hypothetical protein
similar to GI|2688141 (percent identity: 25 %/query alignment coverage: 65.6 %/subject alignment coverage: 54.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837006 NP_297694.1 154 413314 413778
178440 hypothetical XF0405 hypothetical protein
similar to SP|P45344 (percent identity: 66 %/query alignment coverage: 83.6 %/subject alignment coverage: 93.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837007 NP_297695.1 128 413813 414199
178441 hypothetical XF0406 export protein
similar to SP|P42601 (percent identity: 54 %/query alignment coverage: 96.6 %/subject alignment coverage: 96.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837008 NP_297696.1 319 414291 415250
178442 hypothetical XF0407 hypothetical protein
similar to SP|P75876 (percent identity: 34 %/query alignment coverage: 92.8 %/subject alignment coverage: 98.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837009 NP_297697.1 389 415519 416688
178443 hypothetical XF0408 amino acid transporter
similar to GI|2226202 (percent identity: 43 %/query alignment coverage: 92.7 %/subject alignment coverage: 101.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 77747501 NP_297698.2 480 417063 418505
178444 hypothetical XF0409 hypothetical protein genbank 15837011 NP_297699.1 51 418692 418847
178445 hypothetical XF0410 hypothetical protein genbank 15837012 NP_297700.1 54 418822 418986
178446 hypothetical XF0411 ABC transporter nitrate permease
similar to SP|Q51881 (percent identity: 26 %/query alignment coverage: 31.8 %/subject alignment coverage: 66.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837013 NP_297701.1 584 419259 421013
178447 hypothetical XF0412 nitrate ABC transporter ATP-binding protein
similar to SP|P73265 (percent identity: 46 %/query alignment coverage: 51.3 %/subject alignment coverage: 83.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837014 NP_297702.1 433 421059 422360
178448 hypothetical XF0413 hypothetical protein
similar to SP|P27850 (percent identity: 22 %/query alignment coverage: 94.3 %/subject alignment coverage: 90.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837015 NP_297703.1 456 422702 424072
178449 hypothetical XF0414 hypothetical protein genbank 15837016 NP_297704.1 64 424311 424505
178450 hypothetical XF0415 hypothetical protein genbank 15837017 NP_297705.1 66 424508 424708
178451 hypothetical XF0416 lipoprotein precursor
similar to SP|P43262 (percent identity: 36 %/query alignment coverage: 60.1 %/subject alignment coverage: 84.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837018 NP_297706.1 351 424760 425815
178452 hypothetical XF0417 hypothetical protein genbank 15837019 NP_297707.1 101 425830 426135
178453 hypothetical XF0418 toluene tolerance protein
similar to GI|4336801 (percent identity: 24 %/query alignment coverage: 84.9 %/subject alignment coverage: 86.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837020 NP_297708.1 218 426125 426781
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178454 hypothetical XF0419 toluene tolerance protein
similar to GI|4336800 (percent identity: 41 %/query alignment coverage: 83.1 %/subject alignment coverage: 91.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837021 NP_297709.1 178 426778 427314
178455 hypothetical XF0420 toluene tolerance protein
similar to GI|4336799 (percent identity: 42 %/query alignment coverage: 98.4 %/subject alignment coverage: 92.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837022 NP_297710.1 249 427456 428205
178456 hypothetical XF0421 toluene tolerance protein
similar to GI|4336798 (percent identity: 50 %/query alignment coverage: 93.6 %/subject alignment coverage: 91.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837023 NP_297711.1 264 428205 428999
178457 hypothetical XF0422 exodeoxyribonuclease V gamma chain
similar to SP|P07648 (percent identity: 29 %/query alignment coverage: 103.7 %/subject alignment coverage: 103.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837024 NP_297712.1 1121 429245 432610
178458 hypothetical XF0423 exodeoxyribonuclease V beta chain
similar to SP|P08394 (percent identity: 30 %/query alignment coverage: 94.3 %/subject alignment coverage: 96.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837025 NP_297713.1 1212 432697 436335
178459 hypothetical XF0424 hypothetical protein genbank 15837026 NP_297714.1 80 436326 436568
178460 hypothetical XF0425 exodeoxyribonuclease V alpha chain
similar to SP|P04993 (percent identity: 38 %/query alignment coverage: 93.1 %/subject alignment coverage: 97.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837027 NP_297715.1 639 436565 438484
178461 hypothetical XF0426 hypothetical protein genbank 15837028 NP_297716.1 52 438577 438735
178462 hypothetical XF0427 hypothetical protein genbank 15837029 NP_297717.1 60 438786 438968
178463 hypothetical XF0428 tryptophanyl-tRNA synthetase
catalyzes a two-step reaction; first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
genbank 15837030 NP_297718.1 434 439143 440447
178464 hypothetical XF0429 hypothetical protein genbank 15837031 NP_297719.1 63 440656 440847
178465 hypothetical XF0430 DNA primase
synthesizes RNA primers at the replication forks
genbank 15837032 NP_297720.1 577 440844 442577
178466 hypothetical XF0431 hypothetical protein genbank 15837033 NP_297721.1 56 442591 442761
178467 hypothetical XF0432 BrkB protein
similar to GI|6460437 (percent identity: 33 %/query alignment coverage: 95.9 %/subject alignment coverage: 61.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837034 NP_297722.1 269 442832 443641
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178468 hypothetical XF0433 hypothetical protein
similar to GI|1575483 (percent identity: 48 %/query alignment coverage: 99.3 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837035 NP_297723.1 148 443954 444400
178469 hypothetical XF0434 30S ribosomal protein S21
Interacts with residues in the 16S gene, protecting the stem-loop structure
genbank 15837036 NP_297724.1 71 444587 444802
178470 hypothetical XF0435 O-sialoglycoprotein endopeptidase
similar to GI|882587 (percent identity: 63 %/query alignment coverage: 97.4 %/subject alignment coverage: 100.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837037 NP_297725.1 348 444975 446021
178471 hypothetical XF0436 dihydroneopterin aldolase
similar to SP|P31055 (percent identity: 50 %/query alignment coverage: 95.0 %/subject alignment coverage: 93.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837038 NP_297726.1 120 446104 446466
178472 hypothetical XF0437 hypothetical protein
similar to SP|P39455 (percent identity: 50 %/query alignment coverage: 62.7 %/subject alignment coverage: 71.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837039 NP_297727.1 472 446580 447998
178473 hypothetical XF0438 hypothetical protein genbank 15837040 NP_297728.1 38 448138 448254
178474 hypothetical XF0439 beta-glucosidase
similar to SP|P33363 (percent identity: 41 %/query alignment coverage: 100.3 %/subject alignment coverage: 97.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837041 NP_297729.1 740 448471 450693
178475 hypothetical XF0440 hypothetical protein genbank 15837042 NP_297730.1 82 450905 451153
178476 hypothetical XF0441 ribosomal-protein-alanine acetyltransferase
similar to SP|P09453 (percent identity: 38 %/query alignment coverage: 92.3 %/subject alignment coverage: 97.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837043 NP_297731.1 156 451421 451891
178477 hypothetical XF0442 phosphatidyltransferase
similar to GI|2199520 (percent identity: 37 %/query alignment coverage: 91.0 %/subject alignment coverage: 98.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837044 NP_297732.1 256 452314 453084
178478 hypothetical XF0443 hypothetical protein genbank 15837045 NP_297733.1 50 453138 453290
178479 hypothetical XF0444 hypothetical protein genbank 15837046 NP_297734.1 116 453277 453627
178480 hypothetical XF0445 prolyl-tRNA synthetase
catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
genbank 77747502 NP_297735.2 564 453712 455406
178481 hypothetical XF0446 DNA-binding protein
similar to GI|4107150 (percent identity: 33 %/query alignment coverage: 94.4 %/subject alignment coverage: 95.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837048 NP_297736.1 124 455556 455930
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178482 hypothetical XF0447 hypothetical protein genbank 15837049 NP_297737.1 66 456269 456469
178483 hypothetical XF0448 hypothetical protein genbank 15837050 NP_297738.1 35 456635 456742
178484 hypothetical XF0449 hypothetical protein
similar to GI|6458527 (percent identity: 52 %/query alignment coverage: 96.6 %/subject alignment coverage: 98.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837051 NP_297739.1 116 457038 457388
178485 hypothetical XF0450 two-component system, regulatory protein
similar to SP|P43501 (percent identity: 50 %/query alignment coverage: 90.9 %/subject alignment coverage: 99.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -12
genbank 15837052 NP_297740.1 132 457972 458370
178486 hypothetical XF0451 hypothetical protein
similar to SP|P26646 (percent identity: 40 %/query alignment coverage: 88.7 %/subject alignment coverage: 99.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837053 NP_297741.1 363 458451 459542
178487 hypothetical XF0452 integral membrane protease
similar to SP|P25662 (percent identity: 33 %/query alignment coverage: 101.3 %/subject alignment coverage: 91.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837054 NP_297742.1 379 459602 460741
178488 hypothetical XF0453 integral membrane proteinase
similar to SP|P44545 (percent identity: 36 %/query alignment coverage: 102.8 %/subject alignment coverage: 100.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837055 NP_297743.1 287 460738 461601
178489 hypothetical XF0454 hypothetical protein
hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 18
genbank 15837056 NP_297744.1 88 461680 461946
178490 hypothetical XF0455 adenylosuccinate synthetase
catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
genbank 15837057 NP_297745.1 440 462109 463431
178491 hypothetical XF0456 hypothetical protein genbank 15837058 NP_297746.1 58 463737 463913
178492 hypothetical XF0457 glyceraldehyde-3-phosphate dehydrogenase
similar to SP|P06977 (percent identity: 68 %/query alignment coverage: 97.9 %/subject alignment coverage: 98.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -63
genbank 15837059 NP_297747.1 334 463948 464952
178493 hypothetical XF0458 nucleoside diphosphate kinase
catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
genbank 15837060 NP_297748.1 141 466482 466907
178494 hypothetical XF0459 hypothetical protein
similar to SP|Q51385 (percent identity: 57 %/query alignment coverage: 94.1 %/subject alignment coverage: 100.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837061 NP_297749.1 406 466918 468138
178495 hypothetical XF0460 hypothetical protein
similar to SP|P43988 (percent identity: 27 %/query alignment coverage: 67.5 %/subject alignment coverage: 92.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 90
genbank 15837062 NP_297750.1 246 468194 468934
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178496 hypothetical XF0461 hypothetical protein
similar to SP|P27434 (percent identity: 29 %/query alignment coverage: 94.3 %/subject alignment coverage: 59.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837063 NP_297751.1 211 468941 469576
178497 hypothetical XF0462 hypothetical protein genbank 15837064 NP_297752.1 73 469587 469808
178498 hypothetical XF0463 hypothetical protein genbank 15837065 NP_297753.1 218 469869 470525
178499 hypothetical XF0464 hypothetical protein
similar to SP|P77774 (percent identity: 32 %/query alignment coverage: 98.0 %/subject alignment coverage: 101.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837066 NP_297754.1 407 470538 471761
178500 hypothetical XF0465 GTP-binding protein EngA
similar to SP|P77254 (percent identity: 46 %/query alignment coverage: 105.2 %/subject alignment coverage: 97.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837067 NP_297755.1 465 471787 473184
178501 hypothetical XF0466 molybdopterin biosynthesis protein MoeB
ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
genbank 15837068 NP_297756.1 379 473417 474556
178502 hypothetical XF0467 hypothetical protein genbank 15837069 NP_297757.1 42 474553 474681
178503 hypothetical XF0468 hypothetical protein genbank 15837070 NP_297758.1 61 474935 475120
178504 hypothetical XF0469 hypothetical protein genbank 15837071 NP_297759.1 86 475196 475456
178505 hypothetical XF0470 hypothetical protein
similar to SP|P32701 (percent identity: 29 %/query alignment coverage: 97.0 %/subject alignment coverage: 97.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 77747503 NP_297760.2 522 475480 477048
178506 hypothetical XF0471 hypothetical protein genbank 15837073 NP_297761.1 42 477158 477286
178507 hypothetical XF0472 hypothetical protein
similar to SP|P37350 (percent identity: 52 %/query alignment coverage: 97.3 %/subject alignment coverage: 96.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837074 NP_297762.1 449 477566 478915
178508 hypothetical XF0473 hypothetical protein genbank 15837075 NP_297763.1 170 479061 479573
178509 hypothetical XF0474 hypothetical protein genbank 15837076 NP_297764.1 162 479564 480052
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178510 hypothetical XF0475 hypothetical protein genbank 15837077 NP_297765.1 416 480055 481305
178511 hypothetical XF0476 hypothetical protein genbank 15837078 NP_297766.1 164 481305 481799
178512 hypothetical XF0477 hypothetical protein genbank 15837079 NP_297767.1 57 481796 481969
178513 hypothetical XF0478 fimbrial assembly protein
similar to GI|1246302 (percent identity: 33 %/query alignment coverage: 41.8 %/subject alignment coverage: 53.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837080 NP_297768.1 1472 481950 486368
178514 hypothetical XF0479 type IV pilin
similar to GI|3002996 (percent identity: 35 %/query alignment coverage: 103.2 %/subject alignment coverage: 86.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837081 NP_297769.1 125 486443 486820
178515 hypothetical XF0480 hypothetical protein genbank 15837082 NP_297770.1 390 487057 488229
178516 hypothetical XF0481 hypothetical protein genbank 15837083 NP_297771.1 90 488229 488501
178517 hypothetical XF0482 single-strand DNA-binding protein
binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
genbank 15837084 NP_297772.1 148 488523 488969
178518 hypothetical XF0483 hypothetical protein genbank 15837085 NP_297773.1 156 488953 489423
178519 hypothetical XF0484 hypothetical protein genbank 15837086 NP_297774.1 68 489416 489622
178520 hypothetical XF0485 hypothetical protein
similar to GI|2105134 (percent identity: 34 %/query alignment coverage: 120.4 %/subject alignment coverage: 98.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837087 NP_297775.1 181 489619 490164
178521 hypothetical XF0486 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
similar to GI|3328653 (percent identity: 31 %/query alignment coverage: 83.3 %/subject alignment coverage: 47.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837088 NP_297776.1 203 490161 490772
178522 hypothetical XF0487 fimbrillin
similar to GI|1073087 (percent identity: 37 %/query alignment coverage: 91.9 %/subject alignment coverage: 125.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837089 NP_297777.1 185 490847 491404
178523 hypothetical XF0488 hypothetical protein genbank 15837090 NP_297778.1 88 491516 491782
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178524 hypothetical XF0489 hypothetical protein genbank 15837091 NP_297779.1 164 491768 492262
178525 hypothetical XF0490 hypothetical protein genbank 15837092 NP_297780.1 149 492272 492721
178526 hypothetical XF0491 hypothetical protein genbank 15837093 NP_297781.1 154 492718 493182
178527 hypothetical XF0492 hypothetical protein genbank 15837094 NP_297782.1 131 493179 493574
178528 hypothetical XF0493 hypothetical protein genbank 15837095 NP_297783.1 132 493571 493969
178529 hypothetical XF0494 hypothetical protein genbank 15837096 NP_297784.1 117 494079 494432
178530 hypothetical XF0495 hypothetical protein genbank 15837097 NP_297785.1 100 494469 494771
178531 hypothetical XF0496 hypothetical protein
similar to GI|2113948 (percent identity: 27 %/query alignment coverage: 99.7 %/subject alignment coverage: 94.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837098 NP_297786.1 391 495057 496232
178532 hypothetical XF0497 hypothetical protein
similar to GI|2113947 (percent identity: 30 %/query alignment coverage: 103.2 %/subject alignment coverage: 104.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837099 NP_297787.1 155 496232 496699
178533 hypothetical XF0498 hypothetical protein genbank 15837100 NP_297788.1 43 496758 496889
178534 hypothetical XF0499 hypothetical protein genbank 15837101 NP_297789.1 176 497039 497569
178535 hypothetical XF0500 phage-related repressor protein
similar to SP|P76062 (percent identity: 50 %/query alignment coverage: 80.4 %/subject alignment coverage: 72.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837102 NP_297790.1 143 497606 498037
178536 hypothetical XF0501 hypothetical protein
similar to SP|P76063 (percent identity: 59 %/query alignment coverage: 82.7 %/subject alignment coverage: 87.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837103 NP_297791.1 104 498096 498410
178537 hypothetical XF0502 hypothetical protein genbank 15837104 NP_297792.1 101 498442 498747
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178538 hypothetical XF0503 hypothetical protein
hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -87
genbank 15837105 NP_297793.1 200 498826 499428


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