R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|4530591|gb|AAD22107.1| (AF132475) heme oxygenase 1 [Arabidopsis thaliana]
>gi|4530593|gb|AAD22108.1| (AF132476) heme oxygenase 1 [Arabidopsis
thaliana] >gi|4877362|dbj|BAA77758.1| (AB021857) plastid heme
oxygenase [Arabidopsis thaliana] >gi|4877397|dbj|BAA77759.1|
(AB021858) plastid heme oxygenase [Arabidopsis thaliana]
>gi|4883666|gb|AAB95301.2| (AC003105) heme oxygenase 1 (HO1)
[Arabidopsis thaliana]
Length = 282
Frame 3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | | 282
0 50 100 150 200 250
Plus Strand HSPs:
Score = 335 (117.9 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 59/77 (76%), Positives = 69/77 (89%), Frame = +3
Query: 6 FRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYF 185
F+NTGLER+ L+ DLEWFKEQGY IPEP++PG TY+QYLKEL+ KDPQAFICHFYNIYF
Sbjct: 145 FKNTGLERAEKLSTDLEWFKEQGYEIPEPTAPGKTYSQYLKELAEKDPQAFICHFYNIYF 204
Query: 186 AHSAGGRMIGKKVTKHM 236
AHSAGGRMIG+KV + +
Sbjct: 205 AHSAGGRMIGRKVAERI 221
>gi|11935185|gb|AAG42008.1|AF327418_1 (AF327418) putative heme oxygenase 1
(HO1) protein [Arabidopsis thaliana]
Length = 240
Frame 3 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | 240
0 50 100 150 200
Plus Strand HSPs:
Score = 335 (117.9 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 59/77 (76%), Positives = 69/77 (89%), Frame = +3
Query: 6 FRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYF 185
F+NTGLER+ L+ DLEWFKEQGY IPEP++PG TY+QYLKEL+ KDPQAFICHFYNIYF
Sbjct: 103 FKNTGLERAEKLSTDLEWFKEQGYEIPEPTAPGKTYSQYLKELAEKDPQAFICHFYNIYF 162
Query: 186 AHSAGGRMIGKKVTKHM 236
AHSAGGRMIG+KV + +
Sbjct: 163 AHSAGGRMIGRKVAERI 179
>gi|12325201|gb|AAG52552.1|AC013289_19 (AC013289) putative heme oxygenase;
43724-42483 [Arabidopsis thaliana]
Length = 285
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | | 285
0 50 100 150 200 250
Plus Strand HSPs:
Score = 323 (113.7 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 57/75 (76%), Positives = 67/75 (89%), Frame = +3
Query: 6 FRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYF 185
F+NTGLER+ SL +DLEWFKEQGY IPEP +PG TY++YLK+L+ DPQAFICHFYNIYF
Sbjct: 148 FKNTGLERAESLRKDLEWFKEQGYEIPEPMAPGKTYSEYLKDLAENDPQAFICHFYNIYF 207
Query: 186 AHSAGGRMIGKKVTK 230
AHSAGG+MIG KV+K
Sbjct: 208 AHSAGGQMIGTKVSK 222
>gi|8979943|gb|AAF82257.1|AC008051_8 (AC008051) Contains similarity to heme
oxygenase 1 (HO1) from Arabidopsis thaliana gb|AF132475
Length = 283
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | | 283
0 50 100 150 200 250
Plus Strand HSPs:
Score = 287 (101.0 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 52/74 (70%), Positives = 60/74 (81%), Frame = +3
Query: 9 RNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFA 188
+NTGLER+ +L+ DLEWFKEQGY IPE PG Y+QYLK ++ KDP AFICHFYNI FA
Sbjct: 147 KNTGLERAENLSRDLEWFKEQGYEIPESMVPGKAYSQYLKNIAEKDPPAFICHFYNINFA 206
Query: 189 HSAGGRMIGKKVTK 230
HSAGGRMIG KV +
Sbjct: 207 HSAGGRMIGTKVAE 220
>gi|11096135|gb|AAG30207.1| (AF295364) heme oxygenase 1-like protein
[Arabidopsis thaliana]
Length = 140
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 140
0 50 100
Plus Strand HSPs:
Score = 287 (101.0 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 52/74 (70%), Positives = 60/74 (81%), Frame = +3
Query: 9 RNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFA 188
+NTGLER+ +L+ DLEWFKEQGY IPE PG Y+QYLK ++ KDP AFICHFYNI FA
Sbjct: 4 KNTGLERAENLSRDLEWFKEQGYEIPESMVPGKAYSQYLKNIAEKDPPAFICHFYNINFA 63
Query: 189 HSAGGRMIGKKVTK 230
HSAGGRMIG KV +
Sbjct: 64 HSAGGRMIGTKVAE 77
>gi|4530595|gb|AAD22109.1| (AF132477) heme oxygenase 2 [Arabidopsis thaliana]
>gi|6598375|gb|AAC14503.2| (AC002505) heme oxygenase 2 (HO2)
[Arabidopsis thaliana]
Length = 299
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | | 299
0 50 100 150 200 250
Plus Strand HSPs:
Score = 210 (73.9 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 36/77 (46%), Positives = 58/77 (75%), Frame = +3
Query: 6 FRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYF 185
FR TGLER S+ +DL+W +EQ IPEPS+ G++YA+YL+E + + F+ HFY+IYF
Sbjct: 162 FRRTGLERCESIEKDLQWLREQDLVIPEPSNVGVSYAKYLEEQAGESAPLFLSHFYSIYF 221
Query: 186 AHSAGGRMIGKKVTKHM 236
+H AGG+++ ++V++ +
Sbjct: 222 SHIAGGQVLVRQVSEKL 238
>gi|7487884|pir||T00988 hypothetical protein T9J22.22 - Arabidopsis thaliana
Length = 241
Frame 3 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | 241
0 50 100 150 200
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 36/74 (48%), Positives = 56/74 (75%), Frame = +3
Query: 6 FRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYF 185
FR TGLER S+ +DL+W +EQ IPEPS+ G++YA+YL+E + + F+ HFY+IYF
Sbjct: 162 FRRTGLERCESIEKDLQWLREQDLVIPEPSNVGVSYAKYLEEQAGESAPLFLSHFYSIYF 221
Query: 186 AHSAGGRMIGKKVT 227
+H AGG+++ ++V+
Sbjct: 222 SHIAGGQVLVRQVS 235
>gi|11465737 ref|NP_053881.1| heme oxygenase [Porphyra purpurea]
>gi|1708287|sp|P51271|HO_PORPU HEME OXYGENASE
>gi|2147461|pir||S73192 heme oxygenase A - red alga (Porphyra
purpurea) chloroplast >gi|1276737|gb|AAC08157.1| (U38804) heme
oxygenase [Porphyra purpurea]
Length = 236
Frame 3 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | 236
0 50 100 150 200
Plus Strand HSPs:
Score = 101 (35.6 bits), Expect = 0.0044, P = 0.0044
Identities = 23/72 (31%), Positives = 37/72 (51%), Frame = +3
Query: 15 TGLERSASLAEDLEWFKEQGY-TIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAH 191
T L R SLA+DL ++ + I EPSS Y + + K P+ + H Y Y
Sbjct: 72 TELNRKTSLAKDLNYYYGPDWLNIIEPSSATQVYVNRIHNIGNKQPELLVAHAYTRYLGD 131
Query: 192 SAGGRMIGKKVTK 230
+GG+++ KK+ +
Sbjct: 132 LSGGQVL-KKIAR 143
>gi|6016243|sp|O19998|HO_RHOVL HEME OXYGENASE >gi|2323282|gb|AAB66516.1|
(AF000719) heme oxygenase [Rhodella violacea]
Length = 235
Frame 3 hits (HSPs): ________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 235
0 50 100 150 200
__________________
Annotated Domains:
Entrez binding site: PROXIMAL HEME LIGAND (BY S 19
PFAM Heme_oxygenase: Heme oxygenase 1..234
PRINTS HAEMOXYGNASE1: Haem oxygenase motif I - 6..31
PRINTS HAEMOXYGNASE2: Haem oxygenase motif II - 41..66
PRINTS HAEMOXYGNASE3: Haem oxygenase motif III 66..91
PRINTS HAEMOXYGNASE4: Haem oxygenase motif IV - 119..140
PRINTS HAEMOXYGNASE5: Haem oxygenase motif V - 140..161
PRINTS HAEMOXYGNASE6: Haem oxygenase motif VI - 162..183
PRINTS HAEMOXYGNASE7: Haem oxygenase motif VII 194..212
PRODOM PD004127: HO1(5) HO(5) HO2(5) 6..210
PRODOM PD112035: HO_RHOVL 212..234
__________________
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.068, P = 0.066
Identities = 23/70 (32%), Positives = 39/70 (55%), Frame = +3
Query: 21 LERSASLAEDLEWF---KEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAH 191
L R +SL EDL+++ + Q P P++ Y + E+S P+ I H Y Y
Sbjct: 76 LNRKSSLEEDLQFYYGLEWQDKIFPSPATK--VYINRIHEISNTSPELLIAHCYTRYLGD 133
Query: 192 SAGGRMIGKKVTK 230
+GG+++ KK+T+
Sbjct: 134 LSGGQIL-KKITQ 145
>gi|11467702 ref|NP_050754.1| heme oxygenase [Guillardia theta]
>gi|6016242|sp|O78497|HO_GUITH HEME OXYGENASE
>gi|3603027|gb|AAC35688.1| (AF041468) heme oxygenase [Guillardia
theta]
Length = 237
Frame 3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 237
0 50 100 150 200
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.069, P = 0.067
Identities = 24/70 (34%), Positives = 37/70 (52%), Frame = +3
Query: 21 LERSASLAEDLEWFKEQGYT-IPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSA 197
L RS SLA DL ++ + I EPS Y +K++S + P I H Y Y +
Sbjct: 74 LNRSESLALDLNFYYGDTWKDIIEPSEATRVYINRIKKISKEKPLLLIAHAYTRYLGDLS 133
Query: 198 GGRMIGKKVTK 230
GG+++ KK+ +
Sbjct: 134 GGQIL-KKIAQ 143
>gi|6118514|gb|AAF04128.1|AF193578_1 (AF193578) heme oxygenase 1 [Cavia
porcellus]
Length = 85
Frame 3 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | | 85
0 20 40 60 80
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.34, P = 0.29
Identities = 17/55 (30%), Positives = 28/55 (50%), Frame = +3
Query: 21 LERSASLAEDLE-WFKEQGYTIPEPSSPGLT-YAQYLKELSVKDPQAFICHFYNIY 182
L R +L +D+ W+ Q + + P SP + Y Q L E+ +P+ + H Y Y
Sbjct: 27 LHRREALEQDMAFWYGPQ-WRLAVPCSPATSRYVQRLHEVGRAEPELLVAHAYTRY 81
>gi|123476|sp|P14791|HO_CHICK HEME OXYGENASE (HO) >gi|104689|pir||S15123 heme
oxygenase (decyclizing) (EC 1.14.99.3) - chicken
>gi|62924|emb|CAA39661.1| (X56201) haem oxygenase [Gallus gallus]
Length = 296
Frame 3 hits (HSPs): _____________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | 296
0 50 100 150 200 250
__________________
Annotated Domains:
DOMO DM02137: HEMEOXYGENASE(DECYCLIZING) 12..244
DOMO DM07480: HEMEOXYGENASE(DECYCLIZING) 245..295
Entrez binding site: PROXIMAL HEME LIGAND (BY S 28
PFAM Heme_oxygenase: Heme oxygenase 12..250
PRINTS HAEMOXYGNASE1: Haem oxygenase motif I - 15..40
PRINTS HAEMOXYGNASE2: Haem oxygenase motif II - 50..75
PRINTS HAEMOXYGNASE3: Haem oxygenase motif III 76..101
PRINTS HAEMOXYGNASE4: Haem oxygenase motif IV - 129..150
PRINTS HAEMOXYGNASE5: Haem oxygenase motif V - 151..172
PRINTS HAEMOXYGNASE6: Haem oxygenase motif VI - 173..194
PRINTS HAEMOXYGNASE7: Haem oxygenase motif VII 205..223
PRODOM PD004127: HO1(5) HO(5) HO2(5) 10..221
PRODOM PD112043: HO_CHICK 223..295
PROSITE GRAM_POS_ANCHORING: Gram-positive cocci 160..165
PROSITE HEME_OXYGENASE: Heme oxygenase signature 131..139
__________________
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.70, P = 0.50
Identities = 22/70 (31%), Positives = 37/70 (52%), Frame = +3
Query: 21 LERSASLAEDLEWFKEQGYT--IPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHS 194
L R A+L +DLE+F + IP P + Y + L + K P+ + H Y Y
Sbjct: 86 LHRKAALEKDLEYFYGSNWRAEIPCPEATQ-KYVERLHVVGKKHPELLVAHAYTRYLGDL 144
Query: 195 AGGRMIGKKVTK 230
+GG+++ KK+ +
Sbjct: 145 SGGQVL-KKIAQ 155
>gi|6016237|sp|P74133|HO2_SYNY3 HEME OXYGENASE 2 >gi|7433266|pir||S75658 heme
oxygenase (decyclizing) (EC 1.14.99.3) 2 - Synechocystis sp.
(strain PCC 6803) >gi|1653304|dbj|BAA18219.1| (D90912) heme
oxygenase [Synechocystis sp.]
Length = 250
Frame 3 hits (HSPs): ______________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 250
0 50 100 150 200
__________________
Annotated Domains:
Entrez binding site: PROXIMAL HEME LIGAND (BY S 16
PFAM Heme_oxygenase: Heme oxygenase 1..243
PRINTS HAEMOXYGNASE1: Haem oxygenase motif I - 3..28
PRINTS HAEMOXYGNASE2: Haem oxygenase motif II - 38..63
PRINTS HAEMOXYGNASE3: Haem oxygenase motif III 63..88
PRINTS HAEMOXYGNASE4: Haem oxygenase motif IV - 116..137
PRINTS HAEMOXYGNASE5: Haem oxygenase motif V - 137..158
PRINTS HAEMOXYGNASE6: Haem oxygenase motif VI - 162..183
PRINTS HAEMOXYGNASE7: Haem oxygenase motif VII 194..212
PRODOM PD004127: HO1(5) HO(5) HO2(5) 1..208
PRODOM PD112041: HO2_SYNY3 210..249
__________________
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 0.92, P = 0.60
Identities = 19/65 (29%), Positives = 32/65 (49%), Frame = +3
Query: 21 LERSASLAEDLEWFKEQGYT-IPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSA 197
L R+ LAEDL ++ + I +P+ Y LK ++ +P+ I H Y Y +
Sbjct: 73 LNRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEPELLIAHCYTRYLGDLS 132
Query: 198 GGRMI 212
GG+ +
Sbjct: 133 GGQSL 137
>gi|6137641|pdb|1QQ8|A Chain A, X-Ray Crystal Structure Of Human Heme
Oxygenase-1 (Ho-1) In Complex With Its Substrate Heme
>gi|6137642|pdb|1QQ8|B Chain B, X-Ray Crystal Structure Of Human
Heme Oxygenase-1 (Ho-1) In Complex With Its Substrate Heme
Length = 214
Frame 3 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 1.2, P = 0.71
Identities = 20/70 (28%), Positives = 38/70 (54%), Frame = +3
Query: 21 LERSASLAEDLE-WFKEQGYTIPEPSSPGLT-YAQYLKELSVKDPQAFICHFYNIYFAHS 194
L R A+L +DL W+ + + P +P + Y + L E+ +P+ + H Y Y
Sbjct: 74 LHRKAALEQDLAFWYGPRWQEVI-PYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDL 132
Query: 195 AGGRMIGKKVTK 230
+GG+++ KK+ +
Sbjct: 133 SGGQVL-KKIAQ 143
>gi|4105611|gb|AAD02479.1| (AF048757) heme oxygenase; HO1 [Nostoc punctiforme]
Length = 238
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 1.5, P = 0.78
Identities = 18/65 (27%), Positives = 34/65 (52%), Frame = +3
Query: 21 LERSASLAEDLEWFKEQGYTIP-EPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSA 197
L R +L +DL ++ + + SS G Y + ++E+S +P+ I H Y Y +
Sbjct: 74 LNRKYTLEQDLSYYFGANWKEQIKLSSAGEAYVKRIREISATEPELLIAHSYTRYLGDLS 133
Query: 198 GGRMI 212
GG+++
Sbjct: 134 GGQIL 138
>gi|4504437 ref|NP_002124.1| heme oxygenase (decyclizing) 1 [Homo sapiens]
>gi|123446|sp|P09601|HO1_HUMAN HEME OXYGENASE 1 (HO-1)
>gi|87634|pir||S00325 heme oxygenase (decyclizing) (EC 1.14.99.3) 1
- human >gi|35173|emb|CAA30045.1| (X06985) heme oxygenase (AA 1 -
288) [Homo sapiens] >gi|3191964|emb|CAB05109.1| (Z82244) bK286B10.2
(Heme Oxygenase (decycling) 1 (HO-1 EC 1.14.99.3)) [Homo sapiens]
Length = 288
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | 288
0 50 100 150 200 250
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 2.1, P = 0.88
Identities = 20/70 (28%), Positives = 38/70 (54%), Frame = +3
Query: 21 LERSASLAEDLE-WFKEQGYTIPEPSSPGLT-YAQYLKELSVKDPQAFICHFYNIYFAHS 194
L R A+L +DL W+ + + P +P + Y + L E+ +P+ + H Y Y
Sbjct: 83 LHRKAALEQDLAFWYGPRWQEVI-PYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDL 141
Query: 195 AGGRMIGKKVTK 230
+GG+++ KK+ +
Sbjct: 142 SGGQVL-KKIAQ 152
>gi|11418029 ref|XP_009946.1| heme oxygenase (decyclizing) 1 [Homo sapiens]
Length = 314
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 314
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 2.5, P = 0.91
Identities = 20/70 (28%), Positives = 38/70 (54%), Frame = +3
Query: 21 LERSASLAEDLE-WFKEQGYTIPEPSSPGLT-YAQYLKELSVKDPQAFICHFYNIYFAHS 194
L R A+L +DL W+ + + P +P + Y + L E+ +P+ + H Y Y
Sbjct: 109 LHRKAALEQDLAFWYGPRWQEVI-PYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDL 167
Query: 195 AGGRMIGKKVTK 230
+GG+++ KK+ +
Sbjct: 168 SGGQVL-KKIAQ 178
>gi|6016241|sp|O73688|HO_FUGRU HEME OXYGENASE (HO) >gi|2961495|gb|AAC41263.1|
(AF022814) heme-oxygenase [Takifugu rubripes]
Length = 277
Frame 3 hits (HSPs): ______________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | 277
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez binding site: PROXIMAL HEME LIGAND (BY S 29
PFAM Heme_oxygenase: Heme oxygenase 13..248
PRINTS HAEMOXYGNASE1: Haem oxygenase motif I - 16..41
PRINTS HAEMOXYGNASE2: Haem oxygenase motif II - 51..76
PRINTS HAEMOXYGNASE3: Haem oxygenase motif III 77..102
PRINTS HAEMOXYGNASE4: Haem oxygenase motif IV - 130..151
PRINTS HAEMOXYGNASE5: Haem oxygenase motif V - 152..173
PRINTS HAEMOXYGNASE6: Haem oxygenase motif VI - 173..194
PRINTS HAEMOXYGNASE7: Haem oxygenase motif VII 205..223
PRODOM PD004127: HO1(5) HO(5) HO2(5) 11..223
PRODOM PD112042: HO_FUGRU 225..276
__________________
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 2.7, P = 0.93
Identities = 20/73 (27%), Positives = 39/73 (53%), Frame = +3
Query: 21 LERSASLAEDLEWFKEQGYT--IPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHS 194
L R A++ +DLE+F + I P++ Y ++++ ++P+ I H Y Y
Sbjct: 87 LARLATIEKDLEFFFGPDWREKIVVPAATE-RYCHRIRQIGQENPEYLIAHAYTRYLGDL 145
Query: 195 AGGRMIGKKVTKHM 236
+GG+++G+ K M
Sbjct: 146 SGGQVLGRIAQKSM 159
>gi|6016236|sp|P72849|HO1_SYNY3 HEME OXYGENASE 1 >gi|7433265|pir||S74713 heme
oxygenase (decyclizing) (EC 1.14.99.3) 1 - Synechocystis sp.
(strain PCC 6803) >gi|1651938|dbj|BAA16864.1| (D90901) heme
oxygenase [Synechocystis sp.]
Length = 240
Frame 3 hits (HSPs): _______________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 240
0 50 100 150 200
__________________
Annotated Domains:
Entrez binding site: PROXIMAL HEME LIGAND (BY S 17
PFAM Heme_oxygenase: Heme oxygenase 1..239
PRINTS HAEMOXYGNASE1: Haem oxygenase motif I - 4..29
PRINTS HAEMOXYGNASE2: Haem oxygenase motif II - 39..64
PRINTS HAEMOXYGNASE3: Haem oxygenase motif III 64..89
PRINTS HAEMOXYGNASE4: Haem oxygenase motif IV - 117..138
PRINTS HAEMOXYGNASE5: Haem oxygenase motif V - 139..160
PRINTS HAEMOXYGNASE6: Haem oxygenase motif VI - 159..180
PRINTS HAEMOXYGNASE7: Haem oxygenase motif VII 191..209
PRODOM PD004127: HO1(5) HO(5) HO2(5) 2..205
PRODOM PD112040: HO1(1) Q9ZHV6(1) Q9Z3G6(1) 207..238
__________________
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 3.7, P = 0.98
Identities = 17/71 (23%), Positives = 38/71 (53%), Frame = +3
Query: 21 LERSASLAEDLEWFKEQGYTIP-EPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSA 197
L R SL +DL+++ + + S+ G Y +++++ P+ + H Y Y +
Sbjct: 74 LNRKQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVAATAPELLVAHSYTRYLGDLS 133
Query: 198 GGRMIGKKVTKH 233
GG+++ KK+ ++
Sbjct: 134 GGQIL-KKIAQN 144
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.341 0.150 0.498
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.345 0.154 0.581
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.347 0.155 0.559
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.363 0.162 0.608
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.364 0.162 0.601
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.350 0.153 0.519
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 148 147 10. 74 3 12 22 0.12 33
30 0.11 36
+2 0 149 148 10. 74 3 12 22 0.091 34
30 0.11 36
+1 0 149 148 10. 74 3 12 22 0.091 34
30 0.11 36
-1 0 149 148 10. 74 3 12 22 0.091 34
30 0.11 36
-2 0 149 148 10. 74 3 12 22 0.091 34
30 0.11 36
-3 0 148 148 10. 74 3 12 22 0.091 34
30 0.11 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 19
No. of states in DFA: 596 (59 KB)
Total size of DFA: 205 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:01
No. of threads or processors used: 6
Search cpu time: 152.10u 0.86s 152.96t Elapsed: 00:00:40
Total cpu time: 152.12u 0.90s 153.02t Elapsed: 00:00:41
Start: Mon Feb 4 16:55:12 2002 End: Mon Feb 4 16:55:53 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000