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Finding cDNAs
UGID:142193     UniGene Hs.97997     Homo sapiens (human)   RNASEN Order cDNA clone, Links
Ribonuclease type III, nuclear (RNASEN)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_526954.2 PREDICTED: ribonuclease III, nuclear isoform 11 P. troglodytes 100.0 1373
NP_037367.3 ribonuclease III, nuclear isoform 1 H. sapiens 100.0 1373
XP_001085611.1 PREDICTED: ribonuclease III, nuclear M. mulatta 99.9 1192
XP_001500764.1 PREDICTED: ribonuclease type III, nuclear isoform 1 E. caballus 99.6 1373
XP_226843.4 PREDICTED: similar to ribonuclease III R. norvegicus 99.6 1020
NP_081075.3 ribonuclease III, nuclear M. musculus 98.5 1372
NP_001103942.1 hypothetical protein LOC567505 D. rerio 90.7 1288
NP_477436.1 drosha CG8730-PA D. melanogaster 60.7 1234

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; connective tissue; bone marrow; adrenal gland; blood; testis; placenta; pharynx; lung; cervix; uterus; mouth; prostate; nerve; mammary gland; uncharacterized tissue; kidney; vascular; stomach; intestine; trachea; muscle; ovary; thymus; eye; mixed; skin; pancreas; liver; embryonic tissue; esophagus; larynx; thyroid; bladder; salivary gland; ear; heart; spleen; lymph node; bone; ascites; adipose tissue; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5p13.3
UniSTS entry: Chr 5 D5S2192E
UniSTS entry: Chr 5 RH78996
UniSTS entry: Chr 5 (n/a) [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC041162.1 Homo sapiens ribonuclease type III, nuclear, mRNA (cDNA clone IMAGE:5114643), partial cds PA
BC054003.1 Homo sapiens ribonuclease type III, nuclear, mRNA (cDNA clone MGC:61568 IMAGE:6148714), complete cds PA
BX647724.1 Homo sapiens mRNA; cDNA DKFZp686F16262 (from clone DKFZp686F16262) PA
AK001121.1 Homo sapiens cDNA FLJ10259 fis, clone HEMBB1000947, highly similar to Homo sapiens clone HAW100 putative ribonuclease III mRNA P
CR613595.1 full-length cDNA clone CS0DC012YF07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) A
CR607257.1 full-length cDNA clone CS0DC012YG03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) A
NM_013235.4 Homo sapiens ribonuclease type III, nuclear (RNASEN), transcript variant 1, mRNA PA
AF116910.1 Homo sapiens clone HAW100 putative ribonuclease III mRNA, complete cds P
AF189011.1 Homo sapiens ribonuclease III (RN3) mRNA, complete cds PA
AK026563.1 Homo sapiens cDNA: FLJ22910 fis, clone KAT05748, highly similar to AF116910 Homo sapiens clone HAW100 putative ribonuclease III mRNA PA
NM_001100412.1 Homo sapiens ribonuclease type III, nuclear (RNASEN), transcript variant 2, mRNA PA
AK308093.1 Homo sapiens cDNA, FLJ98041 PA
BC024261.1 Homo sapiens ribonuclease III, nuclear, mRNA (cDNA clone IMAGE:3631271) PA
AJ242976.1 Homo sapiens partial mRNA for putative protein p241 which interacts with transcription factor Sp1 P

EST sequences (10 of 361) [Show all sequences]

BX111528.1 Clone IMAGp998B201896_;_IMAGE:770227 ovary
BX099689.1 Clone IMAGp998F17438_;_IMAGE:220816 eye P
AI190270.1 Clone IMAGE:1733186 heart 3' read PA
AI207164.1 Clone IMAGE:1941955 uncharacterized tissue 3' read A
CB134661.1 Clone L14ChoiCK0-15-E06 liver 5' read P
AI539185.1 Clone IMAGE:2205476 uterus 3' read PA
AI539830.1 Clone IMAGE:2191875 uterus 3' read PA
AI799155.1 Clone IMAGE:2349333 mixed 3' read A
CB306554.1 Clone UI-CF-EN1-aej-k-06-0-UI lung 3' read PA
AI820930.1 Clone IMAGE:742146 ovary 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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