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Cancer Genome Anatomy Project |
| NCI > CGAP > GAI > SNP Maps > Chr 22 > SNPs Localized to Interval 2 |
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D22S315 - D22S280 15.3 cM - 26.0 cM / 34.44 cR - 94.86 cR |
| UniGene | Gene Symbol | Description | SNP IDs | SNP Summary | CGAP Gene Info |
| Confirmed SNPs | |||||
| Hs.30743 | PRAME | Preferentially expressed antigen in melanoma | CGAP-C-61252 |
SNPs | Gene Info |
| Hs.517541 | SEC14L4 | SEC14-like 4 (S. cerevisiae) | CGAP-C-61505 |
SNPs | Gene Info |
| Validated SNPs | |||||
| Hs.112728 | PPM1F | Protein phosphatase 1F (PP2C domain containing) | CGAP-C-606228 |
SNPs | Gene Info |
| Hs.584760 | GNAZ | Guanine nucleotide binding protein (G protein), alpha z polypeptide | CGAP-C-60910 |
SNPs | Gene Info |
| Hs.30743 | PRAME | Preferentially expressed antigen in melanoma | CGAP-C-48995 |
SNPs | Gene Info |
| Hs.633319 | - | Transcribed locus | CGAP-C-250358 |
SNPs | Gene Info |
| Hs.449585 | IGL@ | Immunoglobulin lambda joining 3 | CGAP-C-51062 CGAP-C-55145 CGAP-C-59499 CGAP-C-244594 CGAP-C-244607 CGAP-C-248143 CGAP-C-248144 |
SNPs | Gene Info |
| Hs.666310 | - | MRNA full length insert cDNA clone EUROIMAGE 1338448 | CGAP-C-54330 |
SNPs | Gene Info |
| Hs.474388 | UPB1 | Ureidopropionase, beta | CGAP-C-268156 |
SNPs | Gene Info |
| Hs.106730 | RHBDD3 | Rhomboid domain containing 3 | CGAP-C-246853 |
SNPs | Gene Info |
| Hs.715106 | - | Transcribed locus | CGAP-C-50969 |
SNPs | Gene Info |
| Hs.167167 | - | CDNA FLJ36553 fis, clone TRACH2008478 | CGAP-C-261396 |
SNPs | Gene Info |
| Hs.387856 | TTC28 | Tetratricopeptide repeat domain 28 | CGAP-C-50241 |
SNPs | Gene Info |
| Hs.289106 | EMID1 | EMI domain containing 1 | CGAP-C-54006 |
SNPs | Gene Info |
| Hs.75361 | THOC5 | THO complex 5 | CGAP-C-615737 CGAP-C-615738 |
SNPs | Gene Info |
| Hs.173878 | NIPSNAP1 | Nipsnap homolog 1 (C. elegans) | CGAP-C-50209 |
SNPs | Gene Info |
| Hs.474536 | MTMR3 | Myotubularin related protein 3 | CGAP-C-54847 CGAP-C-59423 CGAP-C-64939 |
SNPs | Gene Info |
| Hs.563071 | - | Transcribed locus | CGAP-C-241287 |
SNPs | Gene Info |
| Hs.517559 | EIF4ENIF1 | Eukaryotic translation initiation factor 4E nuclear import factor 1 | CGAP-C-613298 |
SNPs | Gene Info |
| Hs.713636 | MTP18 | Mitochondrial protein 18 kDa | CGAP-C-629376 |
SNPs | Gene Info |
| Hs.517546 | OSBP2 | Oxysterol binding protein 2 | CGAP-C-51003 |
SNPs | Gene Info |
| Hs.517543 | PES1 | Pescadillo homolog 1, containing BRCT domain (zebrafish) | CGAP-C-610921 CGAP-C-610923 |
SNPs | Gene Info |
| Hs.5912 | FBXO7 | F-box protein 7 | CGAP-C-56886 |
SNPs | Gene Info |
| Hs.1964 | SLC5A1 | Solute carrier family 5 (sodium/glucose cotransporter), member 1 | CGAP-C-246554 |
SNPs | Gene Info |
| Hs.474643 | C22orf28 | Chromosome 22 open reading frame 28 | CGAP-C-59413 CGAP-C-613861 |
SNPs | Gene Info |
| Predicted SNPs | |||||
| Hs.112728 | PPM1F | Protein phosphatase 1F (PP2C domain containing) | CGAP-C-2409178 CGAP-C-2409183 |
SNPs | Gene Info |
| Hs.505398 | - | Transcribed locus | CGAP-C-2473633 |
SNPs | Gene Info |
| Hs.449601 | LOC96610 | Hypothetical gene LOC96610 | CGAP-C-2474852 CGAP-C-2474853 |
SNPs | Gene Info |
| Hs.30743 | PRAME | Preferentially expressed antigen in melanoma | CGAP-C-2441269 CGAP-C-2441275 |
SNPs | Gene Info |
| Hs.43834 | ZNF280B | Zinc finger protein 280B | CGAP-C-2425938 |
SNPs | Gene Info |
| Hs.449599 | IVD | Isovaleryl Coenzyme A dehydrogenase | CGAP-C-2456409 CGAP-C-2456410 CGAP-C-2456411 |
SNPs | Gene Info |
| Hs.625768 | - | Immunoglobulin anti-HBsAg lambda light chain (LM25) | CGAP-C-2438887 |
SNPs | Gene Info |
| Hs.143751 | MMP11 | Matrix metallopeptidase 11 (stromelysin 3) | CGAP-C-2403518 CGAP-C-2403519 |
SNPs | Gene Info |
| Hs.593679 | DERL3 | Der1-like domain family, member 3 | CGAP-C-2481412 |
SNPs | Gene Info |
| Hs.449585 | IGL@ | Immunoglobulin lambda joining 3 | CGAP-C-2438890 CGAP-C-2438893 CGAP-C-2438895 CGAP-C-2438896 CGAP-C-2438898 CGAP-C-2438899 CGAP-C-2438900 CGAP-C-2438904 CGAP-C-2438906 CGAP-C-2438907 CGAP-C-2438908 CGAP-C-2438909 CGAP-C-2438910 CGAP-C-2438911 CGAP-C-2438912 CGAP-C-2438916 CGAP-C-2438917 CGAP-C-2438921 CGAP-C-2438922 CGAP-C-2438923 CGAP-C-2448559 CGAP-C-2448560 CGAP-C-2448567 CGAP-C-2448569 CGAP-C-2448571 CGAP-C-2448573 CGAP-C-2448580 CGAP-C-2448586 CGAP-C-2448587 CGAP-C-2448588 CGAP-C-2448593 CGAP-C-2448594 CGAP-C-2448597 CGAP-C-2448598 CGAP-C-2448603 CGAP-C-2448606 CGAP-C-2448638 CGAP-C-2448643 CGAP-C-2448644 CGAP-C-2448645 CGAP-C-2448646 CGAP-C-2448661 CGAP-C-2448667 CGAP-C-2448668 CGAP-C-2448669 CGAP-C-2448670 CGAP-C-2448671 CGAP-C-2484055 |
SNPs | Gene Info |
| Hs.474384 | SPECC1L | SPECC1-like | CGAP-C-2399008 CGAP-C-2399010 CGAP-C-2399011 |
SNPs | Gene Info |
| Hs.656723 | DDT | D-dopachrome tautomerase | CGAP-C-2387639 CGAP-C-2387640 |
SNPs | Gene Info |
| Hs.9850 | C22orf13 | Chromosome 22 open reading frame 13 | CGAP-C-2416978 CGAP-C-2416979 |
SNPs | Gene Info |
| Hs.356549 | SNRPD3 | Small nuclear ribonucleoprotein D3 polypeptide 18kDa | CGAP-C-2465319 CGAP-C-2465320 CGAP-C-2465322 CGAP-C-2465323 |
SNPs | Gene Info |
| Hs.654462 | GSTT2 | Glutathione S-transferase theta 2 | CGAP-C-2470782 |
SNPs | Gene Info |
| Hs.656498 | GSTT2B | Glutathione S-transferase theta 2B (gene/pseudogene) | CGAP-C-2422606 CGAP-C-2422607 |
SNPs | Gene Info |
| Hs.567547 | ASPHD2 | Aspartate beta-hydroxylase domain containing 2 | CGAP-C-2467449 |
SNPs | Gene Info |
| Hs.322852 | GAS2L1 | Growth arrest-specific 2 like 1 | CGAP-C-2404803 |
SNPs | Gene Info |
| Hs.657494 | ADRBK2 | Adrenergic, beta, receptor kinase 2 | CGAP-C-2415470 |
SNPs | Gene Info |
| Hs.194766 | SEZ6L | Seizure related 6 homolog (mouse)-like | CGAP-C-2397426 CGAP-C-2397427 |
SNPs | Gene Info |
| Hs.106730 | RHBDD3 | Rhomboid domain containing 3 | CGAP-C-2441982 CGAP-C-2441983 |
SNPs | Gene Info |
| Hs.20225 | TFIP11 | Tuftelin interacting protein 11 | CGAP-C-2439139 |
SNPs | Gene Info |
| Hs.653712 | MIAT | Myocardial infarction associated transcript (non-protein coding) | CGAP-C-2428917 CGAP-C-2428918 |
SNPs | Gene Info |
| Hs.534350 | SMARCB1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 | CGAP-C-2417816 CGAP-C-2417820 CGAP-C-2417821 |
SNPs | Gene Info |
| Hs.715106 | - | Transcribed locus | CGAP-C-2388203 |
SNPs | Gene Info |
| Hs.474436 | HPS4 | Hermansky-Pudlak syndrome 4 | CGAP-C-2393653 CGAP-C-2393655 CGAP-C-2393660 |
SNPs | Gene Info |
| Hs.713581 | PITPNB | Phosphatidylinositol transfer protein, beta | CGAP-C-2419132 CGAP-C-2419134 |
SNPs | Gene Info |
| Hs.709914 | SRRD | SRR1 domain containing | CGAP-C-2401670 CGAP-C-2401671 CGAP-C-2401672 |
SNPs | Gene Info |
| Hs.406460 | CCDC117 | Coiled-coil domain containing 117 | CGAP-C-2429016 CGAP-C-2429018 CGAP-C-2429021 |
SNPs | Gene Info |
| Hs.387856 | TTC28 | Tetratricopeptide repeat domain 28 | CGAP-C-2395510 CGAP-C-2489880 |
SNPs | Gene Info |
| Hs.229335 | KREMEN1 | Kringle containing transmembrane protein 1 | CGAP-C-2431731 |
SNPs | Gene Info |
| Hs.437638 | XBP1 | X-box binding protein 1 | CGAP-C-2410757 |
SNPs | Gene Info |
| Hs.73088 | RASL10A | RAS-like, family 10, member A | CGAP-C-2467855 |
SNPs | Gene Info |
| Hs.289106 | EMID1 | EMI domain containing 1 | CGAP-C-2428015 |
SNPs | Gene Info |
| Hs.187898 | NF2 | Neurofibromin 2 (merlin) | CGAP-C-2472708 CGAP-C-2472712 |
SNPs | Gene Info |
| Hs.75361 | THOC5 | THO complex 5 | CGAP-C-2458547 CGAP-C-2458549 CGAP-C-2458551 CGAP-C-2458552 |
SNPs | Gene Info |
| Hs.173878 | NIPSNAP1 | Nipsnap homolog 1 (C. elegans) | CGAP-C-2455804 |
SNPs | Gene Info |
| Hs.284292 | UCRC | Ubiquinol-cytochrome c reductase complex (7.2 kD) | CGAP-C-2416642 CGAP-C-2416644 CGAP-C-2416646 |
SNPs | Gene Info |
| Hs.517438 | ASCC2 | Activating signal cointegrator 1 complex subunit 2 | CGAP-C-2410976 CGAP-C-2410977 CGAP-C-2410980 CGAP-C-2410981 CGAP-C-2410982 CGAP-C-2410983 |
SNPs | Gene Info |
| Hs.474536 | MTMR3 | Myotubularin related protein 3 | CGAP-C-2448058 CGAP-C-2448059 CGAP-C-2448060 CGAP-C-2448061 CGAP-C-2466305 |
SNPs | Gene Info |
| Hs.335614 | SEC14L2 | SEC14-like 2 (S. cerevisiae) | CGAP-C-2452964 CGAP-C-2452965 CGAP-C-2452966 |
SNPs | Gene Info |
| Hs.655273 | TBC1D10A | TBC1 domain family, member 10A | CGAP-C-2417113 CGAP-C-2417122 CGAP-C-2417123 CGAP-C-2417124 CGAP-C-2417125 |
SNPs | Gene Info |
| Hs.149098 | SMTN | Smoothelin | CGAP-C-2473411 |
SNPs | Gene Info |
| Hs.406277 | SF3A1 | Splicing factor 3a, subunit 1, 120kDa | CGAP-C-2413003 |
SNPs | Gene Info |
| Hs.517559 | EIF4ENIF1 | Eukaryotic translation initiation factor 4E nuclear import factor 1 | CGAP-C-2480637 CGAP-C-2480639 |
SNPs | Gene Info |
| Hs.555918 | MORC2 | MORC family CW-type zinc finger 2 | CGAP-C-2489296 |
SNPs | Gene Info |
| Hs.715651 | SLC35E4 | Solute carrier family 35, member E4 | CGAP-C-2440694 |
SNPs | Gene Info |
| Hs.713636 | MTP18 | Mitochondrial protein 18 kDa | CGAP-C-2456169 CGAP-C-2456175 |
SNPs | Gene Info |
| Hs.474596 | LIMK2 | LIM domain kinase 2 | CGAP-C-2400472 CGAP-C-2400473 CGAP-C-2400474 |
SNPs | Gene Info |
| Hs.417948 | TCN2 | Transcobalamin II; macrocytic anemia | CGAP-C-2464311 CGAP-C-2464312 CGAP-C-2464313 CGAP-C-2464316 CGAP-C-2464317 CGAP-C-2464318 |
SNPs | Gene Info |
| Hs.517546 | OSBP2 | Oxysterol binding protein 2 | CGAP-C-2432373 CGAP-C-2432375 |
SNPs | Gene Info |
| Hs.517557 | PATZ1 | POZ (BTB) and AT hook containing zinc finger 1 | CGAP-C-2411698 CGAP-C-2411699 |
SNPs | Gene Info |
| Hs.26670 | PIK3IP1 | Phosphoinositide-3-kinase interacting protein 1 | CGAP-C-2419317 CGAP-C-2419321 |
SNPs | Gene Info |
| Hs.517543 | PES1 | Pescadillo homolog 1, containing BRCT domain (zebrafish) | CGAP-C-2441666 |
SNPs | Gene Info |
| Hs.274285 | RFPL3S | RFPL3 antisense RNA (non-protein coding) | CGAP-C-2448520 |
SNPs | Gene Info |
| Hs.714435 | - | Transcribed locus, strongly similar to NP_001028196.1 F-box only protein 7 isoform 2 [Homo sapiens] | CGAP-C-2389897 |
SNPs | Gene Info |
| Hs.5912 | FBXO7 | F-box protein 7 | CGAP-C-2389896 CGAP-C-2389904 CGAP-C-2389905 CGAP-C-2389907 |
SNPs | Gene Info |
| Hs.474643 | C22orf28 | Chromosome 22 open reading frame 28 | CGAP-C-2441234 CGAP-C-2441235 CGAP-C-2441238 |
SNPs | Gene Info |
| Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov ) |