BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu1133
(195 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24379662|ref|NP_721617.1| hypothetical protein SMU.1238c... 387 e-106
gi|125718099|ref|YP_001035232.1| Uracil-DNA glycosylase, pu... 305 1e-81
gi|116627855|ref|YP_820474.1| Uracil-DNA glycosylase [Strep... 300 3e-80
gi|15900532|ref|NP_345136.1| hypothetical protein SP_0624 [... 294 2e-78
gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6... 294 2e-78
gi|15902592|ref|NP_358142.1| hypothetical protein spr0548 [... 292 6e-78
gi|148984004|ref|ZP_01817323.1| hypothetical protein CGSSp3... 292 7e-78
gi|157076340|gb|ABV11023.1| uracil-DNA glycosylase [Strepto... 291 1e-77
gi|148998297|ref|ZP_01825766.1| hypothetical protein CGSSp1... 291 1e-77
gi|55821138|ref|YP_139580.1| hypothetical protein stu1126 [... 291 2e-77
gi|55823048|ref|YP_141489.1| hypothetical protein str1126 [... 290 4e-77
gi|149002306|ref|ZP_01827248.1| hypothetical protein CGSSp1... 289 7e-77
gi|76788183|ref|YP_329917.1| uracil DNA glycosylase family ... 283 4e-75
gi|25011339|ref|NP_735734.1| hypothetical protein gbs1290 [... 283 4e-75
gi|68248828|ref|YP_247940.1| predicted uracil-DNA glycosyla... 281 1e-74
gi|53733144|ref|ZP_00156061.2| COG1573: Uracil-DNA glycosyl... 280 2e-74
gi|77407839|ref|ZP_00784592.1| Unknown [Streptococcus agala... 280 3e-74
gi|77412311|ref|ZP_00788625.1| Unknown [Streptococcus agala... 280 4e-74
gi|6831713|sp|O86222|Y220B_HAEIN Uncharacterized protein HI... 279 5e-74
gi|22537375|ref|NP_688226.1| hypothetical protein SAG1218 [... 279 6e-74
gi|148827360|ref|YP_001292113.1| predicted uracil-DNA glyco... 278 9e-74
gi|145631978|ref|ZP_01787730.1| predicted uracil-DNA glycos... 278 1e-73
gi|145641564|ref|ZP_01797142.1| predicted uracil-DNA glycos... 278 2e-73
gi|30995363|ref|NP_438390.2| hypothetical protein HI0220.2 ... 278 2e-73
gi|145637394|ref|ZP_01793054.1| predicted uracil-DNA glycos... 278 2e-73
gi|145633772|ref|ZP_01789496.1| predicted uracil-DNA glycos... 277 2e-73
gi|42629113|ref|ZP_00154662.1| COG1573: Uracil-DNA glycosyl... 276 7e-73
gi|94988018|ref|YP_596119.1| uracil DNA glycosylase superfa... 269 6e-71
gi|21909870|ref|NP_664138.1| hypothetical protein SpyM3_033... 268 9e-71
gi|71903039|ref|YP_279842.1| uracil DNA glycosylase superfa... 268 2e-70
gi|19745596|ref|NP_606732.1| hypothetical protein spyM18_05... 268 2e-70
gi|15674589|ref|NP_268763.1| hypothetical protein SPy_0472 ... 266 5e-70
gi|125624782|ref|YP_001033265.1| hypothetical protein llmg_... 251 2e-65
gi|116512695|ref|YP_811602.1| Uracil-DNA glycosylase [Lacto... 249 5e-65
gi|15673799|ref|NP_267974.1| hypothetical protein L68066 [L... 248 1e-64
gi|148323081|gb|EDK88331.1| hypothetical protein FNP_0523 [... 247 2e-64
gi|58336872|ref|YP_193457.1| hypothetical protein LBA0545 [... 245 1e-63
gi|34763106|ref|ZP_00144077.1| Hypothetical Protein [Fusoba... 243 4e-63
gi|19704594|ref|NP_604156.1| Uracil-DNA glycosylase [Fusoba... 242 1e-62
gi|116326514|ref|YP_794194.1| Uracil-DNA glycosylase [Leuco... 238 1e-61
gi|154509626|ref|ZP_02045268.1| hypothetical protein ACTODO... 237 3e-61
gi|116492091|ref|YP_803826.1| Uracil-DNA glycosylase [Pedio... 236 5e-61
gi|90961081|ref|YP_534997.1| Uracil DNA glycosylase superfa... 234 3e-60
gi|81097054|ref|ZP_00875368.1| Uracil-DNA glycosylase super... 229 6e-59
gi|146319114|ref|YP_001198826.1| Uracil-DNA glycosylase [St... 228 1e-58
gi|28377013|ref|NP_783905.1| hypothetical protein lp_0048 [... 226 6e-58
gi|116618023|ref|YP_818394.1| Uracil-DNA glycosylase [Leuco... 225 1e-57
gi|116494208|ref|YP_805942.1| Uracil-DNA glycosylase [Lacto... 220 4e-56
gi|116333123|ref|YP_794650.1| Uracil-DNA glycosylase [Lacto... 213 3e-54
gi|84393078|ref|ZP_00991844.1| hypothetical protein V12B01_... 199 5e-50
gi|86147875|ref|ZP_01066180.1| hypothetical protein MED222_... 198 1e-49
gi|148981200|ref|ZP_01816326.1| hypothetical protein VSWAT3... 197 2e-49
gi|124006737|ref|ZP_01691568.1| uracil-DNA glycosylase [Mic... 196 4e-49
gi|90022415|ref|YP_528242.1| 1-(5-Phosphoribosyl)-5-amino-4... 190 4e-47
gi|153835062|ref|ZP_01987729.1| uracil DNA glycosylase supe... 188 2e-46
gi|156972577|ref|YP_001443484.1| hypothetical protein VIBHA... 188 2e-46
gi|88711719|ref|ZP_01105807.1| hypothetical protein FB2170_... 186 4e-46
gi|116183875|ref|ZP_01473838.1| hypothetical protein VEx2w_... 186 8e-46
gi|91228706|ref|ZP_01262619.1| hypothetical protein V12G01_... 186 9e-46
gi|90581307|ref|ZP_01237104.1| hypothetical protein VAS14_1... 186 9e-46
gi|126648477|ref|ZP_01720964.1| Uracil-DNA glycosylase supe... 184 2e-45
gi|115358692|ref|YP_775830.1| Uracil-DNA glycosylase superf... 184 3e-45
gi|118715148|ref|ZP_01567687.1| Uracil-DNA glycosylase supe... 184 3e-45
gi|84359720|ref|ZP_00984451.1| COG1573: Uracil-DNA glycosyl... 183 4e-45
gi|110833891|ref|YP_692750.1| hypothetical protein ABO_1030... 183 5e-45
gi|153801535|ref|ZP_01956121.1| conserved hypothetical prot... 183 5e-45
gi|134293731|ref|YP_001117467.1| Uracil-DNA glycosylase sup... 183 6e-45
gi|118695035|ref|ZP_01553119.1| Uracil-DNA glycosylase supe... 183 6e-45
gi|89075371|ref|ZP_01161793.1| hypothetical protein SKA34_1... 182 6e-45
gi|94493430|ref|ZP_01300634.1| hypothetical protein Rgryl_0... 182 8e-45
gi|150423675|gb|EDN15617.1| conserved hypothetical protein ... 182 9e-45
gi|73538349|ref|YP_298716.1| Uracil-DNA glycosylase superfa... 182 1e-44
gi|153826742|ref|ZP_01979409.1| conserved hypothetical prot... 182 1e-44
gi|116695781|ref|YP_841357.1| Uracil-dna glycosylase [Ralst... 181 1e-44
gi|28899689|ref|NP_799294.1| hypothetical protein VP2915 [V... 181 2e-44
gi|116220161|ref|ZP_01485606.1| hypothetical protein VchoV5... 181 3e-44
gi|15640295|ref|NP_229922.1| hypothetical protein VC0266 [V... 180 3e-44
gi|84354557|ref|ZP_00979461.1| COG1573: Uracil-DNA glycosyl... 180 4e-44
gi|118708433|ref|ZP_01561017.1| Uracil-DNA glycosylase supe... 180 4e-44
gi|116216330|ref|ZP_01482198.1| hypothetical protein VchoR_... 179 6e-44
gi|145297626|ref|YP_001140467.1| uracil-DNA glycosylase [Ae... 179 7e-44
gi|153830395|ref|ZP_01983062.1| conserved hypothetical prot... 179 1e-43
gi|87119969|ref|ZP_01075865.1| hypothetical protein MED121_... 178 1e-43
gi|37681333|ref|NP_935942.1| uracil-DNA glycosylase [Vibrio... 177 3e-43
gi|27364623|ref|NP_760151.1| Uracil-DNA glycosylase [Vibrio... 177 4e-43
gi|78062188|ref|YP_372096.1| Uracil-DNA glycosylase superfa... 177 4e-43
gi|90413400|ref|ZP_01221393.1| hypothetical protein P3TCK_1... 176 9e-43
gi|145590236|ref|YP_001156833.1| Uracil-DNA glycosylase sup... 176 9e-43
gi|83716775|ref|YP_438581.1| Uracil DNA glycosylase superfa... 175 1e-42
gi|77361963|ref|YP_341537.1| putative uracil-DNA glycosylas... 175 1e-42
gi|89094466|ref|ZP_01167405.1| hypothetical protein MED92_0... 174 2e-42
gi|54310493|ref|YP_131513.1| hypothetical protein PBPRA3427... 174 3e-42
gi|117621213|ref|YP_858181.1| uracil-DNA glycosylase [Aerom... 173 5e-42
gi|118037628|ref|ZP_01509034.1| Uracil-DNA glycosylase supe... 171 2e-41
gi|120554746|ref|YP_959097.1| Uracil-DNA glycosylase superf... 171 2e-41
gi|34497814|ref|NP_902029.1| probable uracil-DNA glycosylas... 171 3e-41
gi|127513287|ref|YP_001094484.1| Uracil-DNA glycosylase sup... 171 3e-41
gi|149911168|ref|ZP_01899793.1| Uracil-DNA glycosylase [Mor... 171 3e-41
gi|94313480|ref|YP_586689.1| uracil-DNA glycosylase superfa... 170 5e-41
gi|83644737|ref|YP_433172.1| Uracil-DNA glycosylase [Hahell... 170 5e-41
gi|53723012|ref|YP_111997.1| hypothetical protein BPSS1991 ... 170 5e-41
gi|71906932|ref|YP_284519.1| hypothetical protein Daro_1297... 169 5e-41
gi|89902887|ref|YP_525358.1| Uracil-DNA glycosylase superfa... 169 9e-41
gi|126455816|ref|YP_001076735.1| Uracil DNA glycosylase fam... 168 1e-40
gi|153885510|ref|ZP_02006667.1| Uracil-DNA glycosylase supe... 167 2e-40
gi|90294122|ref|ZP_01213718.1| hypothetical protein Bpse17_... 167 3e-40
gi|86134616|ref|ZP_01053198.1| hypothetical protein MED152_... 167 3e-40
gi|99913571|ref|ZP_01320191.1| hypothetical protein Bpse1_0... 167 3e-40
gi|120437679|ref|YP_863365.1| uracil-DNA glycosylase family... 167 4e-40
gi|119470680|ref|ZP_01613348.1| putative uracil-DNA glycosy... 167 5e-40
gi|91790977|ref|YP_551928.1| Uracil-DNA glycosylase superfa... 166 5e-40
gi|17546048|ref|NP_519450.1| hypothetical protein RSc1329 [... 166 6e-40
gi|83748542|ref|ZP_00945562.1| Uracil DNA glycosylase super... 166 7e-40
gi|56461599|ref|YP_156880.1| Uracil-DNA glycosylase [Idioma... 166 7e-40
gi|86142681|ref|ZP_01061120.1| hypothetical protein MED217_... 166 8e-40
gi|85373551|ref|YP_457613.1| hypothetical protein ELI_03620... 166 9e-40
gi|90662240|ref|ZP_01250075.1| hypothetical protein Bpse110... 166 9e-40
gi|126664640|ref|ZP_01735624.1| hypothetical protein MELB17... 165 1e-39
gi|74316863|ref|YP_314603.1| hypothetical protein Tbd_0845 ... 164 2e-39
gi|149922039|ref|ZP_01910480.1| hypothetical protein PPSIR1... 163 4e-39
gi|121531084|ref|ZP_01663691.1| conserved hypothetical prot... 163 5e-39
gi|114562086|ref|YP_749599.1| Uracil-DNA glycosylase superf... 163 6e-39
gi|149186996|ref|ZP_01865304.1| hypothetical protein ED21_2... 163 6e-39
gi|30249111|ref|NP_841181.1| hypothetical protein NE1122 [N... 162 1e-38
gi|154251536|ref|YP_001412360.1| Uracil-DNA glycosylase sup... 162 1e-38
gi|120610552|ref|YP_970230.1| hypothetical protein Aave_187... 161 2e-38
gi|83594973|ref|YP_428725.1| Uracil-DNA glycosylase superfa... 161 2e-38
gi|118737250|ref|ZP_01585654.1| uracil-DNA glycosylase supe... 161 2e-38
gi|83856071|ref|ZP_00949600.1| hypothetical protein CA2559_... 161 2e-38
gi|71281161|ref|YP_269828.1| phage SPO1 DNA polymerase-rela... 160 3e-38
gi|85708087|ref|ZP_01039153.1| uracil-DNA glycosylase [Eryt... 160 4e-38
gi|152983063|ref|YP_001352670.1| uracil-DNA glycosylase [Ja... 160 5e-38
gi|83945627|ref|ZP_00957973.1| Uracil-DNA glycosylase [Ocea... 157 3e-37
gi|109900332|ref|YP_663587.1| Uracil-DNA glycosylase superf... 155 9e-37
gi|83949985|ref|ZP_00958718.1| uracil-DNA glycosylase, puta... 155 2e-36
gi|88799781|ref|ZP_01115355.1| putative uracil-DNA glycosyl... 152 1e-35
gi|15965633|ref|NP_385986.1| hypothetical protein SMc04210 ... 151 2e-35
gi|126728254|ref|ZP_01744070.1| Uracil-DNA glycosylase supe... 150 3e-35
gi|84501550|ref|ZP_00999722.1| uracil-DNA glycosylase, puta... 150 4e-35
gi|58040338|ref|YP_192302.1| Uracil-DNA glycosylase [Glucon... 150 4e-35
gi|84683551|ref|ZP_01011454.1| uracil-DNA glycosylase, puta... 149 7e-35
gi|153009686|ref|YP_001370901.1| hypothetical protein Oant_... 148 2e-34
gi|62289815|ref|YP_221608.1| hypothetical protein BruAb1_08... 148 2e-34
gi|149200955|ref|ZP_01877930.1| uracil-DNA glycosylase, put... 148 2e-34
gi|17987380|ref|NP_540014.1| Uracil-DNA glycosylase [Brucel... 147 2e-34
gi|114569513|ref|YP_756193.1| uracil-DNA glycosylase [Maric... 147 4e-34
gi|150396807|ref|YP_001327274.1| Uracil-DNA glycosylase sup... 147 4e-34
gi|89056143|ref|YP_511594.1| Uracil-DNA glycosylase superfa... 147 5e-34
gi|85711552|ref|ZP_01042610.1| Uracil-DNA glycosylase [Idio... 146 7e-34
gi|113932627|ref|ZP_01418529.1| Uracil-DNA glycosylase supe... 146 7e-34
gi|148559096|ref|YP_001258844.1| hypothetical protein BOV_0... 145 1e-33
gi|85704398|ref|ZP_01035500.1| uracil-DNA glycosylase, puta... 144 2e-33
gi|116252523|ref|YP_768361.1| hypothetical protein RL2777 [... 144 2e-33
gi|16126323|ref|NP_420887.1| hypothetical protein CC_2084 [... 144 3e-33
gi|17935776|ref|NP_532566.1| hypothetical protein Atu1886 [... 144 3e-33
gi|15889185|ref|NP_354866.1| hypothetical protein AGR_C_346... 143 6e-33
gi|86358051|ref|YP_469943.1| probable uracil-DNA glycosylas... 142 1e-32
gi|121595680|ref|YP_987576.1| Uracil-DNA glycosylase superf... 140 3e-32
gi|126724784|ref|ZP_01740627.1| Uracil-DNA glycosylase [Rho... 140 3e-32
gi|149204661|ref|ZP_01881626.1| hypothetical protein RTM103... 140 3e-32
gi|118756086|ref|ZP_01603869.1| phage SPO1 DNA polymerase d... 140 4e-32
gi|94501847|ref|ZP_01308358.1| putative uracil-DNA glycosyl... 139 6e-32
gi|119774340|ref|YP_927080.1| hypothetical protein Sama_120... 139 7e-32
gi|118073323|ref|ZP_01541505.1| Uracil-DNA glycosylase supe... 139 7e-32
gi|84703634|ref|ZP_01017462.1| hypothetical protein PB2503_... 139 9e-32
gi|149114372|ref|ZP_01841125.1| phage SPO1 DNA polymerase d... 138 1e-31
gi|149913660|ref|ZP_01902193.1| uracil-DNA glycosylase, put... 137 3e-31
gi|153000103|ref|YP_001365784.1| phage SPO1 DNA polymerase ... 137 3e-31
gi|89068529|ref|ZP_01155926.1| uracil-DNA glycosylase, puta... 137 4e-31
gi|126733709|ref|ZP_01749456.1| Uracil-DNA glycosylase supe... 137 4e-31
gi|113951110|ref|ZP_01436704.1| phage SPO1 DNA polymerase d... 136 8e-31
gi|134278457|ref|ZP_01765171.1| Uracil DNA glycosylase fami... 135 1e-30
gi|152995458|ref|YP_001340293.1| uracil-DNA glycosylase sup... 135 1e-30
gi|13470766|ref|NP_102335.1| hypothetical protein mll0558 [... 135 2e-30
gi|99080497|ref|YP_612651.1| Uracil-DNA glycosylase superfa... 135 2e-30
gi|150382548|ref|ZP_01921474.1| phage SPO1 DNA polymerase d... 134 2e-30
gi|86136543|ref|ZP_01055122.1| uracil-DNA glycosylase, puta... 134 3e-30
gi|88795506|ref|ZP_01111202.1| hypothetical protein MADE_08... 134 3e-30
gi|83854714|ref|ZP_00948244.1| uracil-DNA glycosylase, puta... 134 4e-30
gi|56695852|ref|YP_166203.1| uracil-DNA glycosylase, putati... 133 4e-30
gi|126739939|ref|ZP_01755630.1| uracil-DNA glycosylase, put... 133 5e-30
gi|49474251|ref|YP_032293.1| hypothetical protein BQ06460 [... 133 6e-30
gi|90418085|ref|ZP_01225997.1| putative uracil-DNA glycosyl... 133 6e-30
gi|149118990|ref|ZP_01845471.1| putative uracil-DNA glycosy... 132 1e-29
gi|24373341|ref|NP_717384.1| phage SPO1 DNA polymerase doma... 132 1e-29
gi|83941237|ref|ZP_00953699.1| uracil-DNA glycosylase, puta... 132 1e-29
gi|114707278|ref|ZP_01440175.1| hypothetical protein FP2506... 131 2e-29
gi|69936867|ref|ZP_00631622.1| Uracil-DNA glycosylase super... 130 4e-29
gi|120599430|ref|YP_964004.1| phage SPO1 DNA polymerase dom... 130 4e-29
gi|121602558|ref|YP_989136.1| hypothetical protein BARBAKC5... 130 4e-29
gi|114764515|ref|ZP_01443740.1| uracil-DNA glycosylase, put... 130 5e-29
gi|49475577|ref|YP_033618.1| hypothetical protein BH08120 [... 129 1e-28
gi|124547344|ref|ZP_01706275.1| phage SPO1 DNA polymerase d... 129 1e-28
gi|113970849|ref|YP_734642.1| phage SPO1 DNA polymerase dom... 129 1e-28
gi|114048074|ref|YP_738624.1| phage SPO1 DNA polymerase dom... 129 1e-28
gi|146292574|ref|YP_001182998.1| phage SPO1 DNA polymerase ... 128 2e-28
gi|153899792|ref|ZP_02020355.1| Uracil-DNA glycosylase supe... 128 2e-28
gi|156448496|ref|ZP_02054881.1| Uracil-DNA glycosylase supe... 127 4e-28
gi|117921121|ref|YP_870313.1| phage SPO1 DNA polymerase dom... 126 7e-28
gi|110678967|ref|YP_681974.1| hypothetical protein RD1_1663... 124 4e-27
gi|154247254|ref|YP_001418212.1| hypothetical protein Xaut_... 122 9e-27
gi|742236|prf||2009317C adhB downstream ORF 121 3e-26
gi|149378423|ref|ZP_01896118.1| hypothetical protein MDG893... 119 7e-26
gi|126173819|ref|YP_001049968.1| phage SPO1 DNA polymerase ... 116 6e-25
gi|118590260|ref|ZP_01547663.1| hypothetical protein SIAM61... 108 2e-22
gi|91793009|ref|YP_562660.1| putative uracil-DNA glycosylas... 89 2e-16
gi|78047880|ref|YP_364055.1| hypothetical protein XCV2324 [... 84 5e-15
gi|153818289|ref|ZP_01970956.1| conserved hypothetical prot... 82 2e-14
gi|42519569|ref|NP_965499.1| hypothetical protein LJ1692 [L... 79 1e-13
gi|148259783|ref|YP_001233910.1| hypothetical protein Acry_... 79 2e-13
gi|106894165|ref|ZP_01361287.1| Uracil-DNA glycosylase supe... 78 3e-13
>gi|24379662|ref|NP_721617.1| hypothetical protein SMU.1238c [Streptococcus mutans UA159]
gi|24377617|gb|AAN58923.1|AE014960_4 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 195
Score = 387 bits (993), Expect = e-106, Method: Composition-based stats.
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG
Sbjct: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ
Sbjct: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV
Sbjct: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
Query: 181 VPDLKKIIQQIIQSS 195
VPDLKKIIQQIIQSS
Sbjct: 181 VPDLKKIIQQIIQSS 195
>gi|125718099|ref|YP_001035232.1| Uracil-DNA glycosylase, putative [Streptococcus sanguinis SK36]
gi|125498016|gb|ABN44682.1| Uracil-DNA glycosylase, putative [Streptococcus sanguinis SK36]
Length = 194
Score = 305 bits (781), Expect = 1e-81, Method: Composition-based stats.
Identities = 145/193 (75%), Positives = 170/193 (88%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M +LE+ITKAIMAD +NK FTE+ I+PLFAAPK ARINIVGQAPG+K QE+ LYW DKSG
Sbjct: 1 MHTLEDITKAIMADPENKEFTEQGIKPLFAAPKNARINIVGQAPGLKTQEAGLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREW+ VD + FY+SGYFAV+PMDFY+PG GKSGDLPPRK FA KWHQPIL LLPDI+
Sbjct: 61 DRLREWLSVDEEMFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADKWHQPILKLLPDIE 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYLHQK ++KLT+TV HY+ YLPD+FPLVHPSPRNQIWM+++PWF QV
Sbjct: 121 LTILIGQYAQKYYLHQKGNIKLTETVQHYQDYLPDFFPLVHPSPRNQIWMAKNPWFAEQV 180
Query: 181 VPDLKKIIQQIIQ 193
VPDL+ ++Q+II
Sbjct: 181 VPDLQALVQKIIH 193
>gi|116627855|ref|YP_820474.1| Uracil-DNA glycosylase [Streptococcus thermophilus LMD-9]
gi|116101132|gb|ABJ66278.1| Uracil-DNA glycosylase [Streptococcus thermophilus LMD-9]
Length = 194
Score = 300 bits (768), Expect = 3e-80, Method: Composition-based stats.
Identities = 138/192 (71%), Positives = 167/192 (86%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M +LEE+T+AIMAD QNK +TE+ I+PLF+ PKTARINIVGQAPGI+AQES LYWND SG
Sbjct: 1 METLEELTQAIMADEQNKTYTEQGIKPLFSIPKTARINIVGQAPGIRAQESGLYWNDPSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
D LR+WMGV + FY SG FA++PMDFY+PG+GKSGDL PRKGFA KWH+ +LDL P+IQ
Sbjct: 61 DNLRDWMGVSREEFYESGLFAIVPMDFYFPGQGKSGDLGPRKGFADKWHERVLDLAPNIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTIL+GNYAQ YYLHQKSS KLTDTV HY+ YLPDYFPLVHPSPRN IW +++PWF +V
Sbjct: 121 LTILVGNYAQHYYLHQKSSTKLTDTVKHYRDYLPDYFPLVHPSPRNNIWQAKNPWFMKEV 180
Query: 181 VPDLKKIIQQII 192
+PDLK+++Q+I+
Sbjct: 181 LPDLKELVQKIL 192
>gi|15900532|ref|NP_345136.1| hypothetical protein SP_0624 [Streptococcus pneumoniae TIGR4]
gi|111657228|ref|ZP_01407999.1| hypothetical protein SpneT_02001561 [Streptococcus pneumoniae
TIGR4]
gi|149005734|ref|ZP_01829473.1| hypothetical protein CGSSp18BS74_09215 [Streptococcus pneumoniae
SP18-BS74]
gi|14972100|gb|AAK74776.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|147762674|gb|EDK69634.1| hypothetical protein CGSSp18BS74_09215 [Streptococcus pneumoniae
SP18-BS74]
Length = 192
Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats.
Identities = 140/192 (72%), Positives = 165/192 (85%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M+ +E I +AIMADSQN +TE+ IEPLFAAPKTARINI+GQAPG+K QE+ LYW DKSG
Sbjct: 1 MSQIERIKQAIMADSQNASYTERGIEPLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD DTFY+SGYFAV+PMDFY+PG GKSGDLPPR GFA+KWH +L LPDIQ
Sbjct: 61 DRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQVLQELPDIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+LIG YAQ YYL +K S K+T+ V HYK YLP YFPLVHPSPRNQIWM+++PWFEA+V
Sbjct: 121 LTLLIGQYAQAYYLQEKISGKVTERVKHYKDYLPAYFPLVHPSPRNQIWMAKNPWFEAEV 180
Query: 181 VPDLKKIIQQII 192
VPDLKK I+ I+
Sbjct: 181 VPDLKKRIKTIL 192
>gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae
SP6-BS73]
gi|148992269|ref|ZP_01821992.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP9-BS68]
gi|149010758|ref|ZP_01832129.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP19-BS75]
gi|149021584|ref|ZP_01835639.1| hypothetical protein CGSSp23BS72_06949 [Streptococcus pneumoniae
SP23-BS72]
gi|147765239|gb|EDK72168.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP19-BS75]
gi|147925487|gb|EDK76564.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae
SP6-BS73]
gi|147928895|gb|EDK79907.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP9-BS68]
gi|147930280|gb|EDK81265.1| hypothetical protein CGSSp23BS72_06949 [Streptococcus pneumoniae
SP23-BS72]
Length = 192
Score = 294 bits (752), Expect = 2e-78, Method: Composition-based stats.
Identities = 140/192 (72%), Positives = 165/192 (85%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M+ +E I +AIMADSQN +TE+ IEPLFAAPKTARINI+GQAPG+K QE+ LYW DKSG
Sbjct: 1 MSQIERIKQAIMADSQNASYTERGIEPLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD DTFY+SGYFAV+PMDFY+PG GKSGDLPPR GFA+KWH +L LPDIQ
Sbjct: 61 DRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQLLQELPDIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+LIG YAQ YYL +K S K+T+ V HYK YLP YFPLVHPSPRNQIWM+++PWFEA+V
Sbjct: 121 LTLLIGQYAQAYYLQEKISGKVTERVKHYKDYLPAYFPLVHPSPRNQIWMAKNPWFEAEV 180
Query: 181 VPDLKKIIQQII 192
VPDLKK I+ I+
Sbjct: 181 VPDLKKRIKTIL 192
>gi|15902592|ref|NP_358142.1| hypothetical protein spr0548 [Streptococcus pneumoniae R6]
gi|116517025|ref|YP_816044.1| hypothetical protein SPD_0543 [Streptococcus pneumoniae D39]
gi|15458124|gb|AAK99352.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116077601|gb|ABJ55321.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
Length = 192
Score = 292 bits (748), Expect = 6e-78, Method: Composition-based stats.
Identities = 139/192 (72%), Positives = 164/192 (85%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M+ +E I +AIMADSQN +TE+ IE LFAAPKTARINI+GQAPG+K QE+ LYW DKSG
Sbjct: 1 MSQIERIKQAIMADSQNASYTERGIELLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD DTFY+SGYFAV+PMDFY+PG GKSGDLPPR GFA+KWH +L LPDIQ
Sbjct: 61 DRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQVLQELPDIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+LIG YAQ YYL +K S K+T+ V HYK YLP YFPLVHPSPRNQIWM+++PWFEA+V
Sbjct: 121 LTLLIGQYAQAYYLQEKISGKVTERVKHYKAYLPAYFPLVHPSPRNQIWMAKNPWFEAEV 180
Query: 181 VPDLKKIIQQII 192
VPDLKK I+ I+
Sbjct: 181 VPDLKKRIKTIL 192
>gi|148984004|ref|ZP_01817323.1| hypothetical protein CGSSp3BS71_07719 [Streptococcus pneumoniae
SP3-BS71]
gi|147924151|gb|EDK75263.1| hypothetical protein CGSSp3BS71_07719 [Streptococcus pneumoniae
SP3-BS71]
Length = 194
Score = 292 bits (748), Expect = 7e-78, Method: Composition-based stats.
Identities = 140/191 (73%), Positives = 164/191 (85%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M+ +E I +AIMADSQN +TE+ IEPLFAAPKTARINI+GQAPG+K QE+ LYW DKSG
Sbjct: 1 MSQIERIKQAIMADSQNASYTERGIEPLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD DTFY+SGYFAV+PMDFY+PG GKSGDLPPR GFA+KWH +L LPDIQ
Sbjct: 61 DRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQLLQELPDIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+LIG YAQ YYL +K S K+T+ V HYK YLP YFPLVHPSPRNQIWM+++PWFEA+V
Sbjct: 121 LTLLIGQYAQAYYLQEKISGKVTERVKHYKDYLPAYFPLVHPSPRNQIWMAKNPWFEAEV 180
Query: 181 VPDLKKIIQQI 191
VPDLKK I+ I
Sbjct: 181 VPDLKKRIKTI 191
>gi|157076340|gb|ABV11023.1| uracil-DNA glycosylase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 194
Score = 291 bits (746), Expect = 1e-77, Method: Composition-based stats.
Identities = 136/193 (70%), Positives = 166/193 (86%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M+ +E I +AIMAD QNK +T+K IEPLFAAPKTARINI+GQAPG+K + + LYW DKSG
Sbjct: 1 MSKIETIKQAIMADPQNKEYTDKGIEPLFAAPKTARINIIGQAPGMKTEAAGLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREW+GVD DTFY+SG FAVIPMDFY+PG GKSGDLPPRKGFA+KWH +L PDI+
Sbjct: 61 DRLREWLGVDEDTFYNSGLFAVIPMDFYFPGHGKSGDLPPRKGFAEKWHPQLLKECPDIE 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+LIG YAQ YYLH+K S K+T+ V H+K YLP+YFPLVHPSPRNQIWM+++PWFEA+V
Sbjct: 121 LTLLIGQYAQAYYLHEKVSGKVTERVHHFKNYLPEYFPLVHPSPRNQIWMAKNPWFEAEV 180
Query: 181 VPDLKKIIQQIIQ 193
VP+L+ ++Q+II
Sbjct: 181 VPELQALVQKIIH 193
>gi|148998297|ref|ZP_01825766.1| hypothetical protein CGSSp11BS70_03816 [Streptococcus pneumoniae
SP11-BS70]
gi|147755940|gb|EDK62984.1| hypothetical protein CGSSp11BS70_03816 [Streptococcus pneumoniae
SP11-BS70]
Length = 192
Score = 291 bits (746), Expect = 1e-77, Method: Composition-based stats.
Identities = 139/192 (72%), Positives = 164/192 (85%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M+ +E I +AIMADSQN +TE+ IEPLFAAPKTARINI+GQAPG+K QE+ LYW DKSG
Sbjct: 1 MSQIERIKQAIMADSQNASYTERGIEPLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD DTFY+SGYFAV+PMDFY+PG GKSGDLPPR GFA+KWH +L LPDIQ
Sbjct: 61 DRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQLLQELPDIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+LIG YAQ YYL +K S K+T+ V HYK YLP YF LVHPSPRNQIWM+++PWFEA+V
Sbjct: 121 LTLLIGQYAQAYYLQEKISGKVTERVKHYKDYLPAYFLLVHPSPRNQIWMAKNPWFEAEV 180
Query: 181 VPDLKKIIQQII 192
VPDLKK I+ I+
Sbjct: 181 VPDLKKRIKTIL 192
>gi|55821138|ref|YP_139580.1| hypothetical protein stu1126 [Streptococcus thermophilus LMG 18311]
gi|55737123|gb|AAV60765.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
Length = 188
Score = 291 bits (744), Expect = 2e-77, Method: Composition-based stats.
Identities = 134/186 (72%), Positives = 161/186 (86%)
Query: 7 ITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREW 66
+T+AIMAD QNK +TE+ I+PLF+ PKTARINIVGQAPGI+AQES LYWND SGD LR+W
Sbjct: 1 MTQAIMADEQNKTYTEQGIKPLFSIPKTARINIVGQAPGIRAQESGLYWNDPSGDNLRDW 60
Query: 67 MGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIG 126
MGV + FY SG FA++PMDFY+PG GKSGDL PRKGFA KWH+ +LDL P+IQLTIL+G
Sbjct: 61 MGVSREEFYESGLFAIVPMDFYFPGHGKSGDLGPRKGFADKWHERVLDLAPNIQLTILVG 120
Query: 127 NYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKK 186
NYAQ YYLHQKSS KLTDTV HY+ YLPDYFPLVHPSPRN IW +++PWF +V+PDLK+
Sbjct: 121 NYAQHYYLHQKSSTKLTDTVKHYRDYLPDYFPLVHPSPRNNIWQAKNPWFMKEVLPDLKE 180
Query: 187 IIQQII 192
++Q+I+
Sbjct: 181 LVQKIL 186
>gi|55823048|ref|YP_141489.1| hypothetical protein str1126 [Streptococcus thermophilus CNRZ1066]
gi|55739033|gb|AAV62674.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 188
Score = 290 bits (741), Expect = 4e-77, Method: Composition-based stats.
Identities = 134/186 (72%), Positives = 161/186 (86%)
Query: 7 ITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREW 66
+T+AIMAD QNK +TE+ I+PLF+ PKTARINIVGQAPGI+AQES LYWND SGD LR+W
Sbjct: 1 MTQAIMADEQNKTYTEQGIKPLFSIPKTARINIVGQAPGIQAQESGLYWNDPSGDNLRDW 60
Query: 67 MGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIG 126
MGV + FY SG FA++PMDFY+PG GKSGDL PRKGFA KWH+ +LDL P+IQLTIL+G
Sbjct: 61 MGVSREEFYESGLFAIVPMDFYFPGHGKSGDLGPRKGFADKWHERVLDLAPNIQLTILVG 120
Query: 127 NYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKK 186
NYAQ YYLHQKSS KLTDTV HY+ YLPDYFPLVHPSPRN IW +++PWF +V+PDLK+
Sbjct: 121 NYAQHYYLHQKSSTKLTDTVKHYRDYLPDYFPLVHPSPRNNIWQAKNPWFMKEVLPDLKE 180
Query: 187 IIQQII 192
++Q+I+
Sbjct: 181 LVQKIL 186
>gi|149002306|ref|ZP_01827248.1| hypothetical protein CGSSp14BS69_01654 [Streptococcus pneumoniae
SP14-BS69]
gi|147759621|gb|EDK66612.1| hypothetical protein CGSSp14BS69_01654 [Streptococcus pneumoniae
SP14-BS69]
Length = 194
Score = 289 bits (739), Expect = 7e-77, Method: Composition-based stats.
Identities = 138/186 (74%), Positives = 161/186 (86%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M+ +E I +AIMADSQN +TE+ IEPLFAAPKTARINI+GQAPG+K QE+ LYW DKSG
Sbjct: 1 MSQIERIKQAIMADSQNASYTERGIEPLFAAPKTARINIIGQAPGLKTQEAGLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD DTFY+SGYFAV+PMDFY+PG GKSGDLPPR GFA+KWH +L LPDIQ
Sbjct: 61 DRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRTGFAEKWHPQLLQELPDIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+LIG YAQ YYL +K S K+T+ V HYK YLP YFPLVHPSPRNQIWM+++PWFEA+V
Sbjct: 121 LTLLIGQYAQAYYLQEKISGKVTERVKHYKDYLPAYFPLVHPSPRNQIWMAKNPWFEAEV 180
Query: 181 VPDLKK 186
VPDLKK
Sbjct: 181 VPDLKK 186
>gi|76788183|ref|YP_329917.1| uracil DNA glycosylase family protein [Streptococcus agalactiae
A909]
gi|77405404|ref|ZP_00782498.1| Unknown [Streptococcus agalactiae H36B]
gi|77412792|ref|ZP_00788997.1| Unknown [Streptococcus agalactiae 515]
gi|76563240|gb|ABA45824.1| uracil DNA glycosylase family protein [Streptococcus agalactiae
A909]
gi|77161088|gb|EAO72194.1| Unknown [Streptococcus agalactiae 515]
gi|77175986|gb|EAO78761.1| Unknown [Streptococcus agalactiae H36B]
Length = 194
Score = 283 bits (724), Expect = 4e-75, Method: Composition-based stats.
Identities = 133/193 (68%), Positives = 162/193 (83%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
MT LE+I KAI +DSQN+ +TE I+PLFAAPKTARINIVGQAPG+K QE+RLYW DKSG
Sbjct: 1 MTDLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD +TFYHSG FAV+P+DFYYPGKGKSGDLPPRKGFA+KWH IL +P++Q
Sbjct: 61 DRLRQWLGVDEETFYHSGKFAVLPLDFYYPGKGKSGDLPPRKGFAEKWHPLILKEMPNVQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+L+G YAQKYYL + LT+TV YK YLPDY PLVHPSPRNQIW+ ++PWFE +
Sbjct: 121 LTLLVGQYAQKYYLGSSAHKNLTETVKAYKDYLPDYLPLVHPSPRNQIWLKKNPWFEKDL 180
Query: 181 VPDLKKIIQQIIQ 193
+ DL+KI+ I++
Sbjct: 181 IVDLQKIVADILK 193
>gi|25011339|ref|NP_735734.1| hypothetical protein gbs1290 [Streptococcus agalactiae NEM316]
gi|76799515|ref|ZP_00781650.1| uracil-DNA glycosylase [Streptococcus agalactiae 18RS21]
gi|24412877|emb|CAD46949.1| Unknown [Streptococcus agalactiae NEM316]
gi|76585138|gb|EAO61761.1| uracil-DNA glycosylase [Streptococcus agalactiae 18RS21]
Length = 194
Score = 283 bits (724), Expect = 4e-75, Method: Composition-based stats.
Identities = 133/193 (68%), Positives = 162/193 (83%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
MT LE+I KAI +DSQN+ +TE I+PLFAAPKTARINIVGQAPG+K QE+RLYW DKSG
Sbjct: 1 MTDLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD +TFYHSG FAV+P+DFYYPGKGKSGDLPPRKGFA+KWH IL +P++Q
Sbjct: 61 DRLRQWLGVDEETFYHSGKFAVLPLDFYYPGKGKSGDLPPRKGFAEKWHPLILKEMPNVQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+L+G YAQKYYL + LT+TV YK YLPDY PLVHPSPRNQIW+ ++PWFE +
Sbjct: 121 LTLLVGQYAQKYYLGSSAHKNLTETVKSYKDYLPDYLPLVHPSPRNQIWLKKNPWFEKDL 180
Query: 181 VPDLKKIIQQIIQ 193
+ DL+KI+ I++
Sbjct: 181 IVDLQKIVADILK 193
>gi|68248828|ref|YP_247940.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 86-028NP]
gi|68057027|gb|AAX87280.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 86-028NP]
Length = 214
Score = 281 bits (719), Expect = 1e-74, Method: Composition-based stats.
Identities = 132/192 (68%), Positives = 167/192 (86%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 21 LKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 80
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREW+GVDYD FY+SG FAV+PMDFYYPGKGKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 81 DRLREWLGVDYDYFYNSGIFAVLPMDFYYPGKGKSGDLPPRQGFAERWHPMILGNLPNIQ 140
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W +++PWFE QV
Sbjct: 141 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFMPLVHPSPRNQLWATKNPWFEEQV 199
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 200 IPELQILVKQII 211
>gi|53733144|ref|ZP_00156061.2| COG1573: Uracil-DNA glycosylase [Haemophilus influenzae R2866]
gi|145628533|ref|ZP_01784333.1| GTP cyclohydrolase II [Haemophilus influenzae 22.1-21]
gi|145639719|ref|ZP_01795321.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittII]
gi|144979003|gb|EDJ88689.1| GTP cyclohydrolase II [Haemophilus influenzae 22.1-21]
gi|145271087|gb|EDK11002.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittII]
Length = 195
Score = 280 bits (717), Expect = 2e-74, Method: Composition-based stats.
Identities = 132/192 (68%), Positives = 168/192 (87%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 2 LKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 61
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREW+GVDYD FY+SG FAV+PMDFYYPGKGKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 62 DRLREWLGVDYDYFYNSGIFAVLPMDFYYPGKGKSGDLPPRQGFAERWHPMILGNLPNIQ 121
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W++++PWFE QV
Sbjct: 122 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFMPLVHPSPRNQLWVTKNPWFEEQV 180
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 181 IPELQILVKQII 192
>gi|77407839|ref|ZP_00784592.1| Unknown [Streptococcus agalactiae COH1]
gi|77173586|gb|EAO76702.1| Unknown [Streptococcus agalactiae COH1]
Length = 194
Score = 280 bits (716), Expect = 3e-74, Method: Composition-based stats.
Identities = 132/193 (68%), Positives = 161/193 (83%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
MT LE+I KAI +DSQN+ +TE I+PLFAAPKTARINIVGQAPG+K QE+ LYW DKSG
Sbjct: 1 MTDLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEAILYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD +TFYHSG FAV+P+DFYYPGKGKSGDLPPRKGFA+KWH IL +P++Q
Sbjct: 61 DRLRQWLGVDEETFYHSGKFAVLPLDFYYPGKGKSGDLPPRKGFAEKWHPLILKEMPNVQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+L+G YAQKYYL + LT+TV YK YLPDY PLVHPSPRNQIW+ ++PWFE +
Sbjct: 121 LTLLVGQYAQKYYLGSSAHKNLTETVKSYKDYLPDYLPLVHPSPRNQIWLKKNPWFEKDL 180
Query: 181 VPDLKKIIQQIIQ 193
+ DL+KI+ I++
Sbjct: 181 IVDLQKIVADILK 193
>gi|77412311|ref|ZP_00788625.1| Unknown [Streptococcus agalactiae CJB111]
gi|77161630|gb|EAO72627.1| Unknown [Streptococcus agalactiae CJB111]
Length = 194
Score = 280 bits (715), Expect = 4e-74, Method: Composition-based stats.
Identities = 132/193 (68%), Positives = 161/193 (83%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
MT LE+I KAI +DSQN+ +TE I+PLFAAPKTARINIVGQAPG+K QE+RLYW DKSG
Sbjct: 1 MTDLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
RLR+W+GVD +TFYHSG FAV+P+DFYYPGKGKSGDLPPRKGFA+KWH IL +P++Q
Sbjct: 61 VRLRQWLGVDEETFYHSGKFAVLPLDFYYPGKGKSGDLPPRKGFAEKWHPLILKEMPNVQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+L+G YAQKYYL + LT+TV YK YLPDY PLVHPSPRNQIW+ ++PWFE +
Sbjct: 121 LTLLVGQYAQKYYLGSSAHKNLTETVKAYKDYLPDYLPLVHPSPRNQIWLKKNPWFEKDL 180
Query: 181 VPDLKKIIQQIIQ 193
+ DL+KI+ I++
Sbjct: 181 IVDLQKIVADILK 193
>gi|6831713|sp|O86222|Y220B_HAEIN Uncharacterized protein HI0220.2
gi|3212185|gb|AAC21888.1| predicted coding region HI0220.2 [Haemophilus influenzae Rd KW20]
Length = 214
Score = 279 bits (714), Expect = 5e-74, Method: Composition-based stats.
Identities = 131/192 (68%), Positives = 167/192 (86%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 21 LKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 80
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREW+GVDYD FY+SG FAV+PMDFYYPG GKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 81 DRLREWLGVDYDYFYNSGIFAVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNIQ 140
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W++++PWFE QV
Sbjct: 141 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFMPLVHPSPRNQLWVTKNPWFEEQV 199
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 200 IPELQILVKQII 211
>gi|22537375|ref|NP_688226.1| hypothetical protein SAG1218 [Streptococcus agalactiae 2603V/R]
gi|22534248|gb|AAN00099.1|AE014247_14 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
Length = 194
Score = 279 bits (714), Expect = 6e-74, Method: Composition-based stats.
Identities = 131/193 (67%), Positives = 160/193 (82%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
MT LE+I KAI +DSQN+ +TE I+PLFAAPKTARINIVGQAPG+K QE+RLYW DKSG
Sbjct: 1 MTDLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYWKDKSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GVD +TFYHSG FAV+P+DFYYPGKGKSGDL PRKGFA+KWH IL +P++Q
Sbjct: 61 DRLRQWLGVDEETFYHSGKFAVLPLDFYYPGKGKSGDLSPRKGFAEKWHPLILKEMPNVQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+L+G Y QKYYL + LT+TV YK YLPDY PLVHPSPRNQIW+ ++PWFE +
Sbjct: 121 LTLLVGQYTQKYYLGSSAHKNLTETVKAYKDYLPDYLPLVHPSPRNQIWLKKNPWFEKDL 180
Query: 181 VPDLKKIIQQIIQ 193
+ DL+KI+ I++
Sbjct: 181 IVDLQKIVADILK 193
>gi|148827360|ref|YP_001292113.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittGG]
gi|148718602|gb|ABQ99729.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittGG]
Length = 195
Score = 278 bits (712), Expect = 9e-74, Method: Composition-based stats.
Identities = 131/192 (68%), Positives = 167/192 (86%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 2 LKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 61
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREW+GVDYD FY+SG F+V+PMDFYYPGKGKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 62 DRLREWLGVDYDYFYNSGMFSVLPMDFYYPGKGKSGDLPPRQGFAERWHPMILGNLPNIQ 121
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W +++PWFE QV
Sbjct: 122 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFMPLVHPSPRNQLWATKNPWFEEQV 180
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 181 IPELQILVKQII 192
>gi|145631978|ref|ZP_01787730.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 22.4-21]
gi|144982362|gb|EDJ89942.1| predicted uracil-DNA glycosylase [Haemophilus influenzae R3021]
Length = 195
Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats.
Identities = 131/192 (68%), Positives = 167/192 (86%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 2 LKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 61
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREW+GVDYD FY+SG AV+PMDFYYPGKGKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 62 DRLREWLGVDYDYFYNSGMLAVLPMDFYYPGKGKSGDLPPRQGFAERWHPMILGHLPNIQ 121
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W++++PWFE QV
Sbjct: 122 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFMPLVHPSPRNQLWVTKNPWFEEQV 180
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 181 IPELQILVKQII 192
>gi|145641564|ref|ZP_01797142.1| predicted uracil-DNA glycosylase [Haemophilus influenzae R3021]
gi|145273855|gb|EDK13723.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 22.4-21]
Length = 195
Score = 278 bits (710), Expect = 2e-73, Method: Composition-based stats.
Identities = 130/192 (67%), Positives = 168/192 (87%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 2 LKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 61
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
+RLREW+GVDYD FY+SG F+V+PMDFYYPGKGKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 62 ERLREWLGVDYDYFYNSGMFSVLPMDFYYPGKGKSGDLPPRQGFAERWHPMILGHLPNIQ 121
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W++++PWFE QV
Sbjct: 122 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFIPLVHPSPRNQLWITKNPWFEEQV 180
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 181 IPELQILVKQII 192
>gi|30995363|ref|NP_438390.2| hypothetical protein HI0220.2 [Haemophilus influenzae Rd KW20]
Length = 195
Score = 278 bits (710), Expect = 2e-73, Method: Composition-based stats.
Identities = 131/192 (68%), Positives = 167/192 (86%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 2 LKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 61
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLREW+GVDYD FY+SG FAV+PMDFYYPG GKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 62 DRLREWLGVDYDYFYNSGIFAVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNIQ 121
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W++++PWFE QV
Sbjct: 122 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFMPLVHPSPRNQLWVTKNPWFEEQV 180
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 181 IPELQILVKQII 192
>gi|145637394|ref|ZP_01793054.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittHH]
gi|148825519|ref|YP_001290272.1| hypothetical protein CGSHiEE_02100 [Haemophilus influenzae PittEE]
gi|145269486|gb|EDK09429.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittHH]
gi|148715679|gb|ABQ97889.1| hypothetical protein CGSHiEE_02100 [Haemophilus influenzae PittEE]
Length = 195
Score = 278 bits (710), Expect = 2e-73, Method: Composition-based stats.
Identities = 130/192 (67%), Positives = 168/192 (87%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 2 LKNLDEITSSIVADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 61
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
+RLREW+GVDYD FY+SG F+V+PMDFYYPGKGKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 62 ERLREWLGVDYDYFYNSGMFSVLPMDFYYPGKGKSGDLPPRQGFAERWHPMILGHLPNIQ 121
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W++++PWFE QV
Sbjct: 122 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFIPLVHPSPRNQLWITKNPWFEEQV 180
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 181 IPELQILVKQII 192
>gi|145633772|ref|ZP_01789496.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 3655]
gi|145635655|ref|ZP_01791352.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittAA]
gi|144985343|gb|EDJ92173.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 3655]
gi|145267128|gb|EDK07135.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittAA]
Length = 195
Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats.
Identities = 130/192 (67%), Positives = 168/192 (87%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 2 IKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 61
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
+RLREW+GVDYD FY+SG F+V+PMDFYYPGKGKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 62 ERLREWLGVDYDYFYNSGMFSVLPMDFYYPGKGKSGDLPPRQGFAERWHPMILGHLPNIQ 121
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W++++PWFE QV
Sbjct: 122 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFMPLVHPSPRNQLWITKNPWFEEQV 180
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 181 IPELQILVKQII 192
>gi|42629113|ref|ZP_00154662.1| COG1573: Uracil-DNA glycosylase [Haemophilus influenzae R2846]
Length = 195
Score = 276 bits (705), Expect = 7e-73, Method: Composition-based stats.
Identities = 128/192 (66%), Positives = 167/192 (86%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+ +L+EIT +I+AD QNK FTE+ I PLF+APKTARINIVGQAPG+KA++SRLYWNDKSG
Sbjct: 2 LKNLDEITSSIVADHQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSG 61
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
+RLREW+GVDYD FY+SG F+V+PMDFYYPGKGKSGDLPPR+GFA++WH IL LP+IQ
Sbjct: 62 ERLREWLGVDYDYFYNSGMFSVLPMDFYYPGKGKSGDLPPRQGFAERWHPMILGHLPNIQ 121
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTILIG YAQKYYL + +T+TV +Y+++LP + PLVHPSPRNQ+W++++PWF Q+
Sbjct: 122 LTILIGQYAQKYYLPENKD-NVTNTVKNYRQFLPHFIPLVHPSPRNQLWITKNPWFGEQI 180
Query: 181 VPDLKKIIQQII 192
+P+L+ +++QII
Sbjct: 181 IPELQILVKQII 192
>gi|94988018|ref|YP_596119.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS9429]
gi|94991904|ref|YP_600003.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS2096]
gi|139474290|ref|YP_001129006.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
str. Manfredo]
gi|94541526|gb|ABF31575.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS9429]
gi|94545412|gb|ABF35459.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS2096]
gi|134272537|emb|CAM30802.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
str. Manfredo]
Length = 191
Score = 269 bits (688), Expect = 6e-71, Method: Composition-based stats.
Identities = 121/189 (64%), Positives = 159/189 (84%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
++++TKAIMAD N +TE+ I PL+ AP+TARI IVGQAPGI AQE++LYWND+SG RL
Sbjct: 1 MDDLTKAIMADEANLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIRL 60
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R+W+GVD DTFYHSG F +IPMDFYYPGKGKSGDLPPR+GFA KWH P+ L+P+++LTI
Sbjct: 61 RDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELTI 120
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+G YAQ +YL K+ LT+TV H+++YLPDYFPLVHPSPRNQ+W++++PWFE ++P
Sbjct: 121 LVGRYAQDFYLGNKAYKTLTETVRHFEEYLPDYFPLVHPSPRNQLWLAKNPWFEQDLLPI 180
Query: 184 LKKIIQQII 192
L+K ++ I+
Sbjct: 181 LQKRVEAIL 189
>gi|21909870|ref|NP_664138.1| hypothetical protein SpyM3_0334 [Streptococcus pyogenes MGAS315]
gi|28896435|ref|NP_802785.1| hypothetical protein SPs1523 [Streptococcus pyogenes SSI-1]
gi|50913758|ref|YP_059730.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS10394]
gi|56808801|ref|ZP_00366515.1| COG1573: Uracil-DNA glycosylase [Streptococcus pyogenes M49 591]
gi|94989897|ref|YP_597997.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS10270]
gi|94993782|ref|YP_601880.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS10750]
gi|21904057|gb|AAM78941.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28811686|dbj|BAC64618.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|50902832|gb|AAT86547.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS10394]
gi|94543405|gb|ABF33453.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS10270]
gi|94547290|gb|ABF37336.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS10750]
Length = 191
Score = 268 bits (686), Expect = 9e-71, Method: Composition-based stats.
Identities = 121/189 (64%), Positives = 158/189 (83%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
++++TKAIMAD N +TE+ I PL+ AP+TARI IVGQAPGI AQE++LYWND+SG RL
Sbjct: 1 MDDLTKAIMADEANLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIRL 60
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R+W+GVD DTFYHSG F +IPMDFYYPGKGKSGDLPPR+GFA KWH P+ L+P+++LTI
Sbjct: 61 RDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELTI 120
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+G YAQ +YL K+ LT+TV H++ YLPDYFPLVHPSPRNQ+W++++PWFE ++P
Sbjct: 121 LVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDYFPLVHPSPRNQLWLAKNPWFEQDLLPI 180
Query: 184 LKKIIQQII 192
L+K ++ I+
Sbjct: 181 LQKRVEAIL 189
>gi|71903039|ref|YP_279842.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS6180]
gi|71802134|gb|AAX71487.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS6180]
Length = 191
Score = 268 bits (684), Expect = 2e-70, Method: Composition-based stats.
Identities = 120/189 (63%), Positives = 158/189 (83%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
++++TKAIMAD N +TE+ I PL+ AP+TAR+ IVGQAPGI AQE++LYWND+SG RL
Sbjct: 1 MDDLTKAIMADEANLSYTERGIFPLYDAPQTARLIIVGQAPGIVAQETKLYWNDRSGIRL 60
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R+W+GVD DTFYHSG F +IPMDFYYPGKGKSGDLPPR+GFA KWH P+ L+P+++LTI
Sbjct: 61 RDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELTI 120
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+G YAQ +YL K+ LT+TV H++ YLPDYFPLVHPSPRNQ+W++++PWFE ++P
Sbjct: 121 LVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDYFPLVHPSPRNQLWLAKNPWFEQDLLPI 180
Query: 184 LKKIIQQII 192
L+K ++ I+
Sbjct: 181 LQKRVEAIL 189
>gi|19745596|ref|NP_606732.1| hypothetical protein spyM18_0514 [Streptococcus pyogenes MGAS8232]
gi|19747721|gb|AAL97231.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 191
Score = 268 bits (684), Expect = 2e-70, Method: Composition-based stats.
Identities = 120/189 (63%), Positives = 159/189 (84%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
++++TKAIMAD N +TE+ I PL+ AP+TARI IVGQAPGI AQE++LYWND+SG RL
Sbjct: 1 MDDLTKAIMADEANLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIRL 60
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R+W+GVD DTFYHSG F +IPMDFYYPGKGKSGDLPPR+GFA KWH P+ L+P+++LTI
Sbjct: 61 RDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELTI 120
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+G YAQ +YL +K+ LT+TV H+++YLPD FPLVHPSPRNQ+W++++PWFE ++P
Sbjct: 121 LVGRYAQDFYLGKKAYKTLTETVRHFEEYLPDCFPLVHPSPRNQLWLAKNPWFEQDLLPI 180
Query: 184 LKKIIQQII 192
L+K ++ I+
Sbjct: 181 LQKRVEAIL 189
>gi|15674589|ref|NP_268763.1| hypothetical protein SPy_0472 [Streptococcus pyogenes M1 GAS]
gi|71910200|ref|YP_281750.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS5005]
gi|13621698|gb|AAK33484.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71852982|gb|AAZ51005.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
MGAS5005]
Length = 191
Score = 266 bits (680), Expect = 5e-70, Method: Composition-based stats.
Identities = 120/189 (63%), Positives = 157/189 (83%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
++++TKAIMAD N +TE+ I PL+ AP+TARI IVGQAPGI AQ ++LYWND+SG RL
Sbjct: 1 MDDLTKAIMADEANLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQGTKLYWNDRSGIRL 60
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R+W+GVD DTFYHSG F +IPMDFYYPGKGKSGDLPPR+GFA KWH P+ L+P+++LTI
Sbjct: 61 RDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELTI 120
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+G YAQ +YL K+ LT+TV H++ YLPDYFPLVHPSPRNQ+W++++PWFE ++P
Sbjct: 121 LVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDYFPLVHPSPRNQLWLAKNPWFEQDLLPI 180
Query: 184 LKKIIQQII 192
L+K ++ I+
Sbjct: 181 LQKRVEAIL 189
>gi|125624782|ref|YP_001033265.1| hypothetical protein llmg_2007 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493590|emb|CAL98575.1| Hypothetical protein [Lactococcus lactis subsp. cremoris MG1363]
Length = 193
Score = 251 bits (640), Expect = 2e-65, Method: Composition-based stats.
Identities = 113/193 (58%), Positives = 159/193 (82%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M L+EI +AI AD QN +T++ IEPL++ K A+I I+GQAPGI+AQESRL+WND SG
Sbjct: 1 MDKLKEIFEAIKADPQNINYTKEGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
+RLR+W+G+D +TFY S +++P+DFY+PGKGKSGDLPPRKGFA+KWH+ +L +P+I+
Sbjct: 61 ERLRDWLGIDRETFYQSNKISILPLDFYFPGKGKSGDLPPRKGFAEKWHEQLLQQMPEIE 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
L +L+G+YA KYYL+ KSS K T+ + ++KYLP YFPL+HPSPRN IW++++PWFE Q+
Sbjct: 121 LFVLVGSYAIKYYLNLKSSAKTTEVIRDFEKYLPKYFPLIHPSPRNNIWLAKNPWFEPQL 180
Query: 181 VPDLKKIIQQIIQ 193
VP+L+K I Q+++
Sbjct: 181 VPELQKRIAQLMK 193
>gi|116512695|ref|YP_811602.1| Uracil-DNA glycosylase [Lactococcus lactis subsp. cremoris SK11]
gi|116108349|gb|ABJ73489.1| Uracil-DNA glycosylase [Lactococcus lactis subsp. cremoris SK11]
Length = 193
Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats.
Identities = 112/193 (58%), Positives = 158/193 (81%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M L+EI +AI AD QN +T++ IEPL++ K A+I I+GQAPGI+AQESRL+WND SG
Sbjct: 1 MDKLKEIFEAIKADPQNINYTKEGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
+RLR+W+G+D +TFY S +++P+DFY+PGKGKSGDLPPRKGFA+KWH+ +L +P+I+
Sbjct: 61 ERLRDWLGIDRETFYQSNKISILPLDFYFPGKGKSGDLPPRKGFAEKWHEQLLQQMPEIE 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
+L+G+YA KYYL+ KSS K T+ + ++KYLP YFPL+HPSPRN IW++++PWFE Q+
Sbjct: 121 FFVLVGSYAIKYYLNLKSSAKTTEVIRDFEKYLPKYFPLIHPSPRNNIWLAKNPWFEPQL 180
Query: 181 VPDLKKIIQQIIQ 193
VP+L+K I Q+++
Sbjct: 181 VPELQKRIAQLMK 193
>gi|15673799|ref|NP_267974.1| hypothetical protein L68066 [Lactococcus lactis subsp. lactis
Il1403]
gi|12724845|gb|AAK05915.1|AE006412_2 HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis Il1403]
Length = 193
Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 156/193 (80%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M +EI +AI AD QNK +T+ IEPL++ K A+I I+GQAPGI+AQESRL+WND SG
Sbjct: 1 MDKFKEIFEAIKADPQNKKYTKDGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+G+D TFY S +++P+DFY+PGKGKSGDLPPR GFAQKWH+ +L+ +P+I+
Sbjct: 61 DRLRDWLGIDRTTFYESNKISILPLDFYFPGKGKSGDLPPRAGFAQKWHKALLEEMPEIE 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
L IL+G+YA KYYL+ KSS K T+ + ++ YLP YFP+VHPSPRN +W++++PWFE ++
Sbjct: 121 LFILVGSYAIKYYLNLKSSAKTTEVIHDFEAYLPKYFPIVHPSPRNNMWLAKNPWFEPEL 180
Query: 181 VPDLKKIIQQIIQ 193
+P+LKK + Q+++
Sbjct: 181 LPELKKRVAQLMK 193
>gi|148323081|gb|EDK88331.1| hypothetical protein FNP_0523 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 197
Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats.
Identities = 117/190 (61%), Positives = 148/190 (77%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
L++I + I D +NK +TE+ I+PLF+APK ARI IVGQAPGIKAQE++LYW DKSGD+L
Sbjct: 7 LKKIIEEIKNDEENKKYTEQGIDPLFSAPKEARIVIVGQAPGIKAQENKLYWKDKSGDKL 66
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R W G+D TFY+S A+IPMDFYYPGKGK+GDLPPRK F KWH IL+LLP+I+L I
Sbjct: 67 RVWTGIDEKTFYNSNLLAIIPMDFYYPGKGKNGDLPPRKDFGDKWHNKILELLPNIELFI 126
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
LIG YAQ +YL K LTDTV YK+YLP +FP+VHPSP N W+ ++PWFE +VVP
Sbjct: 127 LIGKYAQGFYLKGKLKDNLTDTVKAYKEYLPKFFPIVHPSPLNIRWLKKNPWFEEEVVPT 186
Query: 184 LKKIIQQIIQ 193
LK ++ +I++
Sbjct: 187 LKNMVAEIME 196
>gi|58336872|ref|YP_193457.1| hypothetical protein LBA0545 [Lactobacillus acidophilus NCFM]
gi|58254189|gb|AAV42426.1| hypothetical protein LBA0545 [Lactobacillus acidophilus NCFM]
Length = 195
Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 150/193 (77%)
Query: 2 TSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGD 61
+ ++I + I AD N+ FT++ I+PL+ A +ARINI+GQAPG AQE +W+D SGD
Sbjct: 3 SEFQKIFQEIQADPDNESFTKQGIKPLYYASSSARINIIGQAPGRIAQEKMKFWDDPSGD 62
Query: 62 RLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQL 121
RLR W+GV D FY+SG A++PMDFYYPGKGKSGDLPPRKGFAQ WH +L L+PDIQL
Sbjct: 63 RLRTWLGVSRDVFYNSGMIAILPMDFYYPGKGKSGDLPPRKGFAQNWHPQLLKLMPDIQL 122
Query: 122 TILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVV 181
TIL+G YA + YLH +LTD V +Y++YLPDYFP+VHPSPRN+IW +++PWFE QV+
Sbjct: 123 TILVGAYATRSYLHLGYKDRLTDIVRNYQQYLPDYFPIVHPSPRNKIWEAKNPWFEEQVI 182
Query: 182 PDLKKIIQQIIQS 194
PDL++ IQ I+ +
Sbjct: 183 PDLQRRIQIILNN 195
>gi|34763106|ref|ZP_00144077.1| Hypothetical Protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887240|gb|EAA24340.1| Hypothetical Protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 197
Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats.
Identities = 114/190 (60%), Positives = 146/190 (76%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
L++I + I D +NK +TE+ I+PLF+ + ARI IVGQAPG+KAQE+RLYW DKSGD+L
Sbjct: 7 LKKIIEEIKNDEENKKYTEQGIDPLFSCTEKARIVIVGQAPGLKAQENRLYWKDKSGDKL 66
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R W G+D TFY S A+IPMDFYYPGKGK+GDLPPRK F KWH IL+LLPD++L I
Sbjct: 67 RIWTGIDEKTFYSSNLLAIIPMDFYYPGKGKNGDLPPRKDFGDKWHNKILELLPDVELFI 126
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
LIG YAQ +YL K LTDTV YK+YLP +FP+VHPSP N W+ ++PWFE +VVP
Sbjct: 127 LIGKYAQGFYLKGKLKDNLTDTVRAYKEYLPKFFPIVHPSPLNIRWLKKNPWFEDEVVPT 186
Query: 184 LKKIIQQIIQ 193
LK+++ +I++
Sbjct: 187 LKEMVTKIMK 196
>gi|19704594|ref|NP_604156.1| Uracil-DNA glycosylase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714888|gb|AAL95455.1| hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 197
Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats.
Identities = 114/191 (59%), Positives = 147/191 (76%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
L+ I + I D +NK +TE+ I+PLF+APK ARI IVGQAPGIKAQE+RLYW DKSGD+L
Sbjct: 7 LKRIIEEIKNDEENKKYTEQGIDPLFSAPKEARIVIVGQAPGIKAQENRLYWKDKSGDKL 66
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R W G++ TFY S A+IPMDFYYPGKGKSGDLPPRK F KWH IL+LLP+++L I
Sbjct: 67 RVWTGINEKTFYSSNLLAIIPMDFYYPGKGKSGDLPPRKDFGDKWHHKILELLPNVELFI 126
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+G YAQ++YL K LT+TV YK+YLP +FP+VHPSP N W+ ++ WFE +VVP
Sbjct: 127 LVGKYAQEFYLKGKIKDNLTNTVKAYKEYLPKFFPIVHPSPLNIGWLKKNLWFEEEVVPT 186
Query: 184 LKKIIQQIIQS 194
LK ++ +I+++
Sbjct: 187 LKDMVTKIMKN 197
>gi|116326514|ref|YP_794194.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116098013|gb|ABJ63163.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 190
Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats.
Identities = 109/186 (58%), Positives = 142/186 (76%)
Query: 7 ITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREW 66
I I AD N FT+K + P+F + A++ I+GQAPG++ Q S + W+D SGDRLREW
Sbjct: 3 IIDDIAADQMNMEFTKKGLRPIFHVSEKAKLVIIGQAPGLRVQNSGIMWDDASGDRLREW 62
Query: 67 MGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIG 126
+GV DTFY+SG VIPMDFYYPGKGK GDLPPR+G A KWH +L+L+PD+QL IL+G
Sbjct: 63 IGVGKDTFYNSGKIGVIPMDFYYPGKGKWGDLPPRRGVANKWHPKLLELMPDVQLIILVG 122
Query: 127 NYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKK 186
+YAQKYYL+ K+TD + +YK YLP YFP+VHPSPRN IW+ ++PWFE +VVP+LK+
Sbjct: 123 SYAQKYYLNLGYQSKITDVIKNYKNYLPLYFPIVHPSPRNNIWIKKNPWFEQEVVPELKE 182
Query: 187 IIQQII 192
II +I+
Sbjct: 183 IISKIL 188
>gi|154509626|ref|ZP_02045268.1| hypothetical protein ACTODO_02159 [Actinomyces odontolyticus ATCC
17982]
gi|153799260|gb|EDN81680.1| hypothetical protein ACTODO_02159 [Actinomyces odontolyticus ATCC
17982]
Length = 199
Score = 237 bits (604), Expect = 3e-61, Method: Composition-based stats.
Identities = 107/190 (56%), Positives = 140/190 (73%)
Query: 3 SLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDR 62
++ I + I AD N +T++ + PLF A RI IVGQAPG A+E+ + WND+SGDR
Sbjct: 9 AVRAIAEEIAADPANASYTKRGVGPLFYAGPECRIMIVGQAPGRVAEETGIVWNDRSGDR 68
Query: 63 LREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLT 122
LR+WMGVD DTFY SG A++PMDFY+PG GKSGDLPPRK FA WH +L+L+P +++T
Sbjct: 69 LRDWMGVDRDTFYESGKLAIVPMDFYFPGTGKSGDLPPRKDFADTWHPRLLELMPKLEMT 128
Query: 123 ILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVP 182
IL+G YA + YL+ SS LT+ V YK+YLP YFPLVHPSPRNQ+WM ++PWF A V+P
Sbjct: 129 ILVGAYATRRYLNLSSSASLTEVVRDYKRYLPTYFPLVHPSPRNQMWMKKNPWFAADVLP 188
Query: 183 DLKKIIQQII 192
DLK + ++
Sbjct: 189 DLKARVASLL 198
>gi|116492091|ref|YP_803826.1| Uracil-DNA glycosylase [Pediococcus pentosaceus ATCC 25745]
gi|116102241|gb|ABJ67384.1| Uracil-DNA glycosylase [Pediococcus pentosaceus ATCC 25745]
Length = 194
Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats.
Identities = 109/183 (59%), Positives = 146/183 (79%)
Query: 11 IMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVD 70
IM D QN ++T K P+++ A+I IVGQAPG K Q++ + WND+SGDRLR WMG+
Sbjct: 11 IMQDPQNAIYTAKGWHPIYSINPQAKILIVGQAPGKKVQDTEIMWNDQSGDRLRAWMGIS 70
Query: 71 YDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQ 130
DTFY+SG AVIPMDFYYPGK KSGD+PPRK A+KWHQ +LD++P+IQLT+LIG+YAQ
Sbjct: 71 RDTFYNSGDIAVIPMDFYYPGKAKSGDVPPRKEVAEKWHQKMLDIMPNIQLTLLIGSYAQ 130
Query: 131 KYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
K+YL+ S T+ V +Y+ +LP+YFPLVHPSPRN IW++++PWFE +VVP+L+KI+Q
Sbjct: 131 KHYLNVPRSTTTTNLVQNYRNFLPEYFPLVHPSPRNNIWLAKNPWFEQEVVPELQKIVQN 190
Query: 191 IIQ 193
I++
Sbjct: 191 ILK 193
>gi|90961081|ref|YP_534997.1| Uracil DNA glycosylase superfamily protein [Lactobacillus
salivarius subsp. salivarius UCC118]
gi|90820275|gb|ABD98914.1| Uracil DNA glycosylase superfamily protein [Lactobacillus
salivarius subsp. salivarius UCC118]
Length = 198
Score = 234 bits (596), Expect = 3e-60, Method: Composition-based stats.
Identities = 113/188 (60%), Positives = 143/188 (76%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
+ I + I D QN+ +TEK IEPL+ A A+I IVGQAPG KAQ++ + WND SGDRL
Sbjct: 8 FQRIFEEIKLDPQNQEYTEKGIEPLYYANPKAKILIVGQAPGQKAQDTHMVWNDLSGDRL 67
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R W+ V D FY+S FA++PMDFY+PGKGK GDLPPRK FA KWH + L+P+I+LTI
Sbjct: 68 RTWLDVSRDEFYNSDLFAIMPMDFYFPGKGKGGDLPPRKNFAAKWHPKLRKLMPNIELTI 127
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+G+YA K YL+ KSS KLTD V Y+ YLP+YFPLVHPSPRN IW+ ++PWFE QVV D
Sbjct: 128 LVGSYAVKKYLNLKSSAKLTDIVKDYQTYLPEYFPLVHPSPRNLIWLKKNPWFEKQVVKD 187
Query: 184 LKKIIQQI 191
L+K++ +I
Sbjct: 188 LQKLVSEI 195
>gi|81097054|ref|ZP_00875368.1| Uracil-DNA glycosylase superfamily [Streptococcus suis 89/1591]
gi|80976889|gb|EAP40458.1| Uracil-DNA glycosylase superfamily [Streptococcus suis 89/1591]
Length = 192
Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats.
Identities = 113/189 (59%), Positives = 138/189 (73%), Gaps = 1/189 (0%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
L +I +AI+ D N+ FT K I PLF AP TA+I I+GQAPG+K QE ++D SG+ L
Sbjct: 3 LADIRQAIIEDVANRDFTNKGIAPLFQAPSTAKILIIGQAPGLKTQEKGRLFDDASGNNL 62
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R+W+GVD TFY SG+FA++PMDFYYPGKGKSGDLPPRK FA KWH I+ LP I+LTI
Sbjct: 63 RQWLGVDRQTFYESGHFAILPMDFYYPGKGKSGDLPPRKDFAPKWHPLIMKQLPQIELTI 122
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+GNYAQ YYL +KS LT+ V H YLP YFPL HPSPRN IW ++HPWF Q +P
Sbjct: 123 LVGNYAQTYYL-EKSQRNLTERVKHADDYLPKYFPLPHPSPRNNIWQAKHPWFVEQTLPI 181
Query: 184 LKKIIQQII 192
LK I ++
Sbjct: 182 LKNNINILL 190
>gi|146319114|ref|YP_001198826.1| Uracil-DNA glycosylase [Streptococcus suis 05ZYH33]
gi|146321319|ref|YP_001201030.1| Uracil-DNA glycosylase [Streptococcus suis 98HAH33]
gi|145689920|gb|ABP90426.1| Uracil-DNA glycosylase [Streptococcus suis 05ZYH33]
gi|145692125|gb|ABP92630.1| Uracil-DNA glycosylase [Streptococcus suis 98HAH33]
Length = 192
Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats.
Identities = 113/189 (59%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
L +I +AI+ D N+ FT K I PLF AP TA+I I+GQAPG+K QE ++D SG L
Sbjct: 3 LADIRQAIIEDVANRDFTNKGIAPLFQAPSTAKILIIGQAPGLKTQEKGRLFDDASGSNL 62
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R+W+GVD TFY SG+FA++PMDFYYPGKGKSGDLPPRK FA KWH I+ LP I+LTI
Sbjct: 63 RQWLGVDRQTFYESGHFAILPMDFYYPGKGKSGDLPPRKDFAPKWHPLIMKQLPQIELTI 122
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
L+GNYAQ YYL +KS LT+ V H YLP YFPL HPSPRN IW ++HPWF Q +P
Sbjct: 123 LVGNYAQTYYL-EKSQRNLTERVKHADDYLPTYFPLPHPSPRNNIWQAKHPWFVEQTLPI 181
Query: 184 LKKIIQQII 192
LK I ++
Sbjct: 182 LKNNINILL 190
>gi|28377013|ref|NP_783905.1| hypothetical protein lp_0048 [Lactobacillus plantarum WCFS1]
gi|28269844|emb|CAD62741.1| unknown [Lactobacillus plantarum WCFS1]
Length = 210
Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats.
Identities = 107/189 (56%), Positives = 140/189 (74%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+T+++EIT+AI AD N +T K +PLF TA I ++ QAPG AQ ++ Y+ND SG
Sbjct: 18 ITTIKEITEAIKADPDNAEYTAKGWDPLFHVLPTATILVISQAPGRIAQNTKTYFNDASG 77
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+WMGV + FY S AV+P+DFYYPGKGKSGDLPPRKGF KWH+P+L ++P++Q
Sbjct: 78 DRLRDWMGVTREQFYQSDRIAVMPLDFYYPGKGKSGDLPPRKGFMDKWHEPLLAMMPNVQ 137
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT+L+G YA K YL + LT TV +Y+ YLPDYFPLVHPSP N W ++PWF+A V
Sbjct: 138 LTLLVGQYAIKAYLGRSRQKTLTATVQNYQDYLPDYFPLVHPSPLNYGWQKKNPWFQATV 197
Query: 181 VPDLKKIIQ 189
VPDL++ +Q
Sbjct: 198 VPDLQRRVQ 206
>gi|116618023|ref|YP_818394.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096870|gb|ABJ62021.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 191
Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/187 (56%), Positives = 135/187 (72%)
Query: 7 ITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREW 66
I + I AD N +TEK + P+F PK+A+I I+GQAPG K QE+ + WND SGDRLREW
Sbjct: 3 IFEDIKADKDNLTYTEKGLNPVFYTPKSAKILIIGQAPGKKVQETEIMWNDASGDRLREW 62
Query: 67 MGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIG 126
+ VD FY SG F I MDFYYPGK KSGD PPR A+KWH ++ +P++QL +LIG
Sbjct: 63 LDVDRKQFYDSGNFGFISMDFYYPGKAKSGDKPPRGSIAKKWHPKLIASMPNLQLIVLIG 122
Query: 127 NYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKK 186
+YAQKYYLH + K+TD V +YK YLP YFP++HPSPRN IW++R+PWFE +VVP L+
Sbjct: 123 SYAQKYYLHLARTEKITDVVKNYKSYLPKYFPIIHPSPRNNIWLNRNPWFEKEVVPRLQA 182
Query: 187 IIQQIIQ 193
+ I+
Sbjct: 183 KVSDTIK 189
>gi|116494208|ref|YP_805942.1| Uracil-DNA glycosylase [Lactobacillus casei ATCC 334]
gi|116104358|gb|ABJ69500.1| Uracil-DNA glycosylase [Lactobacillus casei ATCC 334]
Length = 193
Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats.
Identities = 109/193 (56%), Positives = 136/193 (70%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
MT ++I +AI D N FT + +PL+ A I I QAPG KAQ ++ YWND SG
Sbjct: 1 MTDADKIFEAIRQDPDNADFTAQGWDPLYHIEPEATILIASQAPGRKAQTTKTYWNDPSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR WMGV D FYHSG AV+P+DFYYPGKGKSGDLPPRK FA KWH +L L+P IQ
Sbjct: 61 DRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGKGKSGDLPPRKDFAAKWHPSLLALMPKIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LTI+IG YAQKYYL ++ LT TV +++ YLPDYFP+VHPSP N W++R+PWF V
Sbjct: 121 LTIVIGAYAQKYYLRKRREKTLTATVKNFRAYLPDYFPIVHPSPLNYGWVNRNPWFMTDV 180
Query: 181 VPDLKKIIQQIIQ 193
VP L+ + +++
Sbjct: 181 VPALQAQVADLMK 193
>gi|116333123|ref|YP_794650.1| Uracil-DNA glycosylase [Lactobacillus brevis ATCC 367]
gi|116098470|gb|ABJ63619.1| Uracil-DNA glycosylase [Lactobacillus brevis ATCC 367]
Length = 192
Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 135/190 (71%), Gaps = 2/190 (1%)
Query: 5 EEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLR 64
+E+ +AI AD +N+ FT + I PL+ + A I ++ QAP +AQ S +W+D SGDRLR
Sbjct: 4 DEVFQAIQADPENQAFTAQGILPLYHIEENAEILLISQAPSRQAQASMTFWDDPSGDRLR 63
Query: 65 EWMGVDYDTFYHSGYFAVIPMDFYYPGK-GKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
WMGV D FYHSG V+P+DFYYPGK GDLPPRKGFA+KWH P+L L+P ++LT+
Sbjct: 64 SWMGVTKDQFYHSGKIGVLPLDFYYPGKHAHGGDLPPRKGFAEKWHAPLLALMPKVKLTL 123
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
LIG YAQK YL + LT TVAH++ YLP YFPLVHPSP N W ++HPWF VVP
Sbjct: 124 LIGQYAQKAYLSNRQKT-LTATVAHFQDYLPAYFPLVHPSPLNYGWQNQHPWFMTDVVPV 182
Query: 184 LKKIIQQIIQ 193
L++ IQ II+
Sbjct: 183 LQQRIQSIIK 192
>gi|84393078|ref|ZP_00991844.1| hypothetical protein V12B01_01742 [Vibrio splendidus 12B01]
gi|84376330|gb|EAP93212.1| hypothetical protein V12B01_01742 [Vibrio splendidus 12B01]
Length = 197
Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats.
Identities = 91/164 (55%), Positives = 121/164 (73%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A AR+ I+GQAPGIK ES + WND SG+RLREW+G+D DTFY A++PM
Sbjct: 25 PVIQAHPNARLLIIGQAPGIKVHESSIPWNDASGERLREWLGIDSDTFYDEQKVAIVPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKGKSGDLPPRK A+ WH +L LP+IQ+T+LIG YAQ YYL K++ LT+TV
Sbjct: 85 FCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMTLLIGQYAQNYYLTNKTTSTLTETV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
+++ + PD+ PL HPSPRN IW+ ++PWFE+ V+P ++K I +
Sbjct: 145 RNWQVWAPDFLPLPHPSPRNNIWLKKNPWFESDVIPYIQKHISE 188
>gi|86147875|ref|ZP_01066180.1| hypothetical protein MED222_00602 [Vibrio sp. MED222]
gi|85834302|gb|EAQ52455.1| hypothetical protein MED222_00602 [Vibrio sp. MED222]
Length = 197
Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats.
Identities = 88/164 (53%), Positives = 122/164 (74%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A AR+ I+GQAPGIK ES + WND SG+RLREW+ +D DTFY A++PM
Sbjct: 25 PVIQAHPNARLLIIGQAPGIKVHESSIPWNDASGERLREWLEMDSDTFYDEQKVAIVPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKGKSGDLPPRK A WH+ +L LP+IQ+T+LIG YAQ YYL +K++ LT+TV
Sbjct: 85 FCYPGKGKSGDLPPRKECAALWHKKVLQSLPNIQMTLLIGQYAQNYYLKEKATSTLTETV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
+++ + P++ PL HPSPRN IW+ ++PWFE++V+P ++K + +
Sbjct: 145 RNWQAWAPEFLPLPHPSPRNNIWLKKNPWFESEVIPYIRKHVSE 188
>gi|148981200|ref|ZP_01816326.1| hypothetical protein VSWAT3_16095 [Vibrionales bacterium SWAT-3]
gi|145960956|gb|EDK26282.1| hypothetical protein VSWAT3_16095 [Vibrionales bacterium SWAT-3]
Length = 197
Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats.
Identities = 88/164 (53%), Positives = 122/164 (74%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A AR+ I+GQAPGIK ES + WND SG+RLREW+G+ DTFY A++PM
Sbjct: 25 PVIQAHPNARLLIIGQAPGIKVHESSIPWNDASGERLREWLGIGSDTFYDEQKVAIVPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKGKSGDLPPRK A+ WH+ +L LP+IQ+T+LIG YAQ YYL ++++ LT+TV
Sbjct: 85 FCYPGKGKSGDLPPRKECAELWHKKVLQSLPNIQMTLLIGQYAQNYYLKERTTKTLTETV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
+++ + P++ PL HPSPRN IW+ ++PWFE +V+P ++K I +
Sbjct: 145 KNWQAWAPEFLPLPHPSPRNNIWLKKNPWFETEVIPYIRKHISE 188
>gi|124006737|ref|ZP_01691568.1| uracil-DNA glycosylase [Microscilla marina ATCC 23134]
gi|123987645|gb|EAY27345.1| uracil-DNA glycosylase [Microscilla marina ATCC 23134]
Length = 195
Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats.
Identities = 89/166 (53%), Positives = 121/166 (72%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +A +A+I I+GQAPG K S + W+D SG RLREWMGVD +TFY + A++PM
Sbjct: 27 PVVSAQTSAKIMIIGQAPGTKVHASGVPWDDASGQRLREWMGVDKETFYDTSKIAIMPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+GK GDLPPR A WH+ +L+ LPD+ LT+LIG YAQKYYL ++ LT+TV
Sbjct: 87 FCYPGRGKGGDLPPRVECAPLWHERLLEQLPDLVLTLLIGQYAQKYYLGKQRKKNLTETV 146
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
Y +Y PDYFPLVHPSPRN +W ++ WFE +VVP L+ ++++++
Sbjct: 147 RAYHEYQPDYFPLVHPSPRNLMWQRKNLWFEDEVVPALQAVVKKLL 192
>gi|90022415|ref|YP_528242.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR)
carboxylase [Saccharophagus degradans 2-40]
gi|89952015|gb|ABD82030.1| Uracil-DNA glycosylase superfamily [Saccharophagus degradans 2-40]
Length = 194
Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats.
Identities = 90/162 (55%), Positives = 114/162 (70%), Gaps = 1/162 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A+I I+GQAPG K S + W+D SG RLR+WMG+D FY A++PM
Sbjct: 31 PIVRGAPNAKILIIGQAPGTKVHASGIPWDDASGRRLRQWMGIDDQAFYDESRIAIMPMG 90
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKG+SGDLPPR A KWH +L LP+IQLT+LIG YAQKYYL ++ LTDTV
Sbjct: 91 FCYPGKGRSGDLPPRPECAPKWHARMLASLPNIQLTLLIGQYAQKYYL-KEGFTNLTDTV 149
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKII 188
H++ YLP YFPL HPSPRNQIW+ ++PWFE +P+L++ I
Sbjct: 150 KHWEDYLPHYFPLPHPSPRNQIWLKQNPWFEEIAIPELQRRI 191
>gi|153835062|ref|ZP_01987729.1| uracil DNA glycosylase superfamily [Vibrio harveyi HY01]
gi|148868458|gb|EDL67564.1| uracil DNA glycosylase superfamily [Vibrio harveyi HY01]
Length = 190
Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/166 (53%), Positives = 118/166 (71%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A K ARI I+GQAPG + ++ + WND SGDRLR+W+ +D DTFY A++PM
Sbjct: 26 PVVQAAKDARILIIGQAPGTRVHKTSIPWNDPSGDRLRQWLDIDKDTFYDPNKIAIVPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKG SGDLPPRK A WH+ ILD LP+I+LT+LIG Y+Q+YYL K LT TV
Sbjct: 86 FCYPGKGNSGDLPPRKECAPAWHKKILDQLPNIELTLLIGLYSQQYYLTNKPKT-LTQTV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ + PD+ PL HPSPRN +W+ ++PWFE+ VVP LKK + ++
Sbjct: 145 QQWQDWEPDFIPLPHPSPRNTLWLKKNPWFESDVVPYLKKRVHSML 190
>gi|156972577|ref|YP_001443484.1| hypothetical protein VIBHAR_00217 [Vibrio harveyi ATCC BAA-1116]
gi|156524171|gb|ABU69257.1| hypothetical protein VIBHAR_00217 [Vibrio harveyi ATCC BAA-1116]
Length = 190
Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/166 (53%), Positives = 118/166 (71%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A K ARI I+GQAPG + ++ + WND SGDRLR+W+ +D DTFY A++PM
Sbjct: 26 PVVQAAKDARILIIGQAPGTRVHKTSIPWNDPSGDRLRQWLDIDKDTFYDPNKIAIVPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKG SGDLPPRK A WH+ ILD LP+I+LT+LIG Y+Q+YYL K LT TV
Sbjct: 86 FCYPGKGNSGDLPPRKECAPAWHKKILDQLPNIELTLLIGLYSQQYYLTNKPKT-LTQTV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ + PD+ PL HPSPRN +W+ ++PWFE+ VVP LKK + ++
Sbjct: 145 QQWQDWEPDFIPLPHPSPRNTLWLKKNPWFESDVVPYLKKRVHSML 190
>gi|88711719|ref|ZP_01105807.1| hypothetical protein FB2170_06375 [Flavobacteriales bacterium
HTCC2170]
gi|88710660|gb|EAR02892.1| hypothetical protein FB2170_06375 [Flavobacteriales bacterium
HTCC2170]
Length = 189
Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats.
Identities = 86/166 (51%), Positives = 120/166 (72%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ AA ++I I+GQAPG K ++ + W+D SG +LR+W+GV + FY A+IPM
Sbjct: 24 PIVAAHPDSKIVIIGQAPGTKVHKTGVPWDDPSGRQLRKWLGVSDEIFYDDSKIALIPMG 83
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKGKSGDLPPR A WH+P+LD +P+++L ILIG YAQKYYL +++ LT+TV
Sbjct: 84 FCYPGKGKSGDLPPRTECAPLWHKPMLDKMPNLELVILIGMYAQKYYLGKEAKKTLTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
A+Y+ YLP PL HPSPRN+ W++++PWF VVP+L++ + II
Sbjct: 144 ANYESYLPKCLPLPHPSPRNRFWLTKNPWFNESVVPELQQRVSSII 189
>gi|116183875|ref|ZP_01473838.1| hypothetical protein VEx2w_02003587 [Vibrio sp. Ex25]
Length = 190
Score = 186 bits (471), Expect = 8e-46, Method: Composition-based stats.
Identities = 87/166 (52%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A K ARI I+GQAPG + ++ + WND SGDRLR+W+ +D D FY A++PM
Sbjct: 26 PVVQAAKGARILIIGQAPGTRVHKTSIPWNDPSGDRLRQWLDIDKDVFYDPNKIAIVPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKG SGDLPPRK A WH+ IL+ LP+I+LT+LIG Y+Q+YYL K LT TV
Sbjct: 86 FCYPGKGNSGDLPPRKECAPTWHRKILEQLPNIELTLLIGQYSQQYYLTNKPKT-LTQTV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ + PD+ PL HPSPRN +W+ ++PWFE+ VVP LKK + ++
Sbjct: 145 QQWQDWEPDFIPLPHPSPRNTLWLKKNPWFESDVVPYLKKRVHSML 190
>gi|91228706|ref|ZP_01262619.1| hypothetical protein V12G01_00045 [Vibrio alginolyticus 12G01]
gi|91187732|gb|EAS74051.1| hypothetical protein V12G01_00045 [Vibrio alginolyticus 12G01]
Length = 190
Score = 186 bits (471), Expect = 9e-46, Method: Composition-based stats.
Identities = 87/166 (52%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A K ARI I+GQAPG + ++ + WND SGDRLR+W+ +D D FY A++PM
Sbjct: 26 PVVQAAKGARILIIGQAPGTRVHKTSIPWNDPSGDRLRQWLDIDKDVFYDPNKIAIVPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKG SGDLPPRK A WH+ IL+ LP+I+LT+LIG Y+Q+YYL K LT TV
Sbjct: 86 FCYPGKGNSGDLPPRKECAPTWHKKILEQLPNIELTLLIGQYSQQYYLTNKPKT-LTQTV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ + PD+ PL HPSPRN +W+ ++PWFE+ VVP LKK + ++
Sbjct: 145 QQWQDWEPDFIPLPHPSPRNTLWLKKNPWFESDVVPYLKKRVHSML 190
>gi|90581307|ref|ZP_01237104.1| hypothetical protein VAS14_19126 [Vibrio angustum S14]
gi|90437546|gb|EAS62740.1| hypothetical protein VAS14_19126 [Vibrio angustum S14]
Length = 195
Score = 186 bits (471), Expect = 9e-46, Method: Composition-based stats.
Identities = 84/164 (51%), Positives = 120/164 (73%), Gaps = 1/164 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ AR+ ++GQAPG+K ++ + +ND SGDRLR+W+G+D DTFY+ + A++PM
Sbjct: 25 PVIQFSSKARLLLIGQAPGLKVHQTGIPFNDPSGDRLRQWLGLDKDTFYNPEHIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKGK+GDLPPR A +WHQP+LDL+P+I +T+LIG YAQ YYL K LT+TV
Sbjct: 85 LCYPGKGKTGDLPPRSECAPQWHQPVLDLMPNIGMTLLIGQYAQNYYLQDKPKT-LTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
++++ P Y PL HPSPRN IW+ ++PWFE+ VVP +++ + Q
Sbjct: 144 KQWQQWAPRYIPLPHPSPRNAIWLKKNPWFESDVVPYIRQYVHQ 187
>gi|126648477|ref|ZP_01720964.1| Uracil-DNA glycosylase superfamily protein [Algoriphagus sp. PR1]
gi|126575361|gb|EAZ79693.1| Uracil-DNA glycosylase superfamily protein [Algoriphagus sp. PR1]
Length = 194
Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/169 (49%), Positives = 117/169 (69%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+F ++I +VGQAPG K Q + + WND SG+ LR W+ V + FY+ F ++PM
Sbjct: 26 KPVFRIHPKSKILVVGQAPGTKVQNTGIPWNDPSGEELRRWLDVGREEFYNEEIFGILPM 85
Query: 86 DFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F YPGKG SGDLPPR A WH L LPD++L +LIG YAQ+YYL+ + LT+T
Sbjct: 86 GFCYPGKGNSGDLPPRPECAPTWHPQFLKELPDLKLILLIGQYAQRYYLNGERKSNLTET 145
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
V +K YLP YFPLVHPSPRN++W ++PWFE QV+P+L++ + +++ +
Sbjct: 146 VKAFKDYLPQYFPLVHPSPRNRLWQRKNPWFEKQVIPELRQHVFEVMNA 194
>gi|115358692|ref|YP_775830.1| Uracil-DNA glycosylase superfamily [Burkholderia cepacia AMMD]
gi|115283980|gb|ABI89496.1| Uracil-DNA glycosylase superfamily [Burkholderia cepacia AMMD]
Length = 199
Score = 184 bits (466), Expect = 3e-45, Method: Composition-based stats.
Identities = 85/166 (51%), Positives = 111/166 (66%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + ARI IVGQAPG + S + W+D SG RLR+W+GVD DTFY FA++PM
Sbjct: 32 PVVRAHRDARILIVGQAPGARVHASGIPWDDASGKRLRDWLGVDADTFYDETRFAIVPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LP I+LT+LIG YAQ+++L LTDTV
Sbjct: 92 FCYPGRGASGDNPPRPECAPLWIDRLLAELPSIRLTLLIGQYAQRHFLRDTRKATLTDTV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ Y PD PL HPSPRNQ W HPWF+A+VVP+L++ + ++
Sbjct: 152 QAWRDYGPDVLPLPHPSPRNQAWFKHHPWFDAEVVPELRRRVAPLV 197
>gi|118715148|ref|ZP_01567687.1| Uracil-DNA glycosylase superfamily [Burkholderia multivorans ATCC
17616]
gi|118661743|gb|EAV68484.1| Uracil-DNA glycosylase superfamily [Burkholderia multivorans ATCC
17616]
Length = 273
Score = 184 bits (466), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/166 (51%), Positives = 112/166 (67%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + ARI IVGQAPG + S + W+D SG RLR W+GVD DTFY FA++PM
Sbjct: 106 PVVRAHRDARILIVGQAPGARVHASGIPWDDASGKRLRGWLGVDADTFYDDTRFAIVPMG 165
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W + +L LP I+LT+LIG YAQ+++L LTDTV
Sbjct: 166 FCYPGRGASGDNPPRAECAPLWLERLLAELPSIRLTLLIGQYAQRHFLRDTRKPTLTDTV 225
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
A ++ Y PD PL HPSPRNQ W HPWF+A+VVP+L++ + ++
Sbjct: 226 AAWRDYGPDVLPLPHPSPRNQAWFKHHPWFDAEVVPELRRRVAPLV 271
>gi|84359720|ref|ZP_00984451.1| COG1573: Uracil-DNA glycosylase [Burkholderia dolosa AUO158]
gi|124898779|gb|EAY70622.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158]
Length = 206
Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats.
Identities = 85/169 (50%), Positives = 111/169 (65%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + ARI IVGQAPG + S + W+D SG RLR+W+GVD DTFY FA++PM
Sbjct: 32 PVVRAHRDARILIVGQAPGARVHASGIPWDDASGKRLRDWLGVDADTFYDDTRFAIVPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G GD PPR A W +L LP I+LT+LIG YAQ+++L LTDTV
Sbjct: 92 FCYPGRGAGGDNPPRPECAALWLDRLLAELPSIRLTLLIGQYAQRHFLRTARKATLTDTV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
++ Y D PL HPSPRNQ W HPWF+AQVVP+L++ + +I ++
Sbjct: 152 RAWRDYGADVLPLPHPSPRNQAWFKHHPWFDAQVVPELRRRVAPLIGAA 200
>gi|110833891|ref|YP_692750.1| hypothetical protein ABO_1030 [Alcanivorax borkumensis SK2]
gi|110647002|emb|CAL16478.1| Conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 198
Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats.
Identities = 85/170 (50%), Positives = 118/170 (69%), Gaps = 2/170 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + AR+ IVGQAPG + E+ + WND SGDRLR+W+ V +TFY A+IPM
Sbjct: 27 PVVQAGQGARLLIVGQAPGTRVHETGIPWNDPSGDRLRDWLQVGRETFYDESQIAIIPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPG+GK GDLPPR A +WH P+L LP+++LT+L+G YAQ++YL K LTDTV
Sbjct: 87 LCYPGRGKGGDLPPRPECAPQWHGPLLAELPNLRLTLLVGRYAQRFYL-AKPGKTLTDTV 145
Query: 147 AHYKKYLPD-YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
H+ + L +FPL HPSPRN++W+ + PWFE +VVP+L+K + +Q +
Sbjct: 146 RHFARALDQGFFPLPHPSPRNRLWLQQRPWFEEEVVPELRKQVASALQKA 195
>gi|153801535|ref|ZP_01956121.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124122940|gb|EAY41683.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 190
Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats.
Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A+I I+GQAPG K + + WND SG+RLR+W+G+D + FY G A++PM
Sbjct: 25 PVIRAHPAAKILIIGQAPGTKVHNTSIPWNDASGERLRQWLGLDREAFYCEGNIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKG+SGDLPPRK A WH +L+ LP+ QLT+LIG YAQ YYL K S LT+TV
Sbjct: 85 LCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPST-LTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++++ P PL HPSPRN +W+ HPWFE +VP L++ ++Q++
Sbjct: 144 QQWQRWAPSVLPLPHPSPRNTLWLRNHPWFEQDIVPYLRQRVKQVL 189
>gi|134293731|ref|YP_001117467.1| Uracil-DNA glycosylase superfamily [Burkholderia vietnamiensis G4]
gi|134136888|gb|ABO58002.1| Uracil-DNA glycosylase superfamily [Burkholderia vietnamiensis G4]
Length = 214
Score = 183 bits (464), Expect = 6e-45, Method: Composition-based stats.
Identities = 83/166 (50%), Positives = 110/166 (66%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + AR+ IVGQAPG + S + W+D SG RLR+W+GVD DTFY FA++PM
Sbjct: 32 PVLRAHRDARVLIVGQAPGARVHASGIPWDDASGKRLRDWLGVDADTFYDETRFAIVPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LP I+LT+LIG YAQ+++L LTDTV
Sbjct: 92 FCYPGRGASGDNPPRPECAALWLDRLLAELPSIRLTLLIGQYAQRHFLRDARKATLTDTV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ Y P PL HPSPRNQ W HPWF+A+VVP+L++ + ++
Sbjct: 152 QAWRDYGPGVLPLPHPSPRNQGWFKHHPWFDAEVVPELRRRVAPLL 197
>gi|118695035|ref|ZP_01553119.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MC40-6]
gi|118647639|gb|EAV54468.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MC40-6]
Length = 199
Score = 183 bits (464), Expect = 6e-45, Method: Composition-based stats.
Identities = 84/166 (50%), Positives = 111/166 (66%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + AR+ IVGQAPG + S + W+D SG RLR+W+GVD DTFY FA++PM
Sbjct: 32 PVVRAHRDARVLIVGQAPGARVHASGIPWDDASGKRLRDWLGVDADTFYDETRFAIVPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LP I+LT+LIG YAQ+++L LTDTV
Sbjct: 92 FCYPGRGASGDNPPRPECAPLWIDRLLAELPSIRLTLLIGQYAQRHFLRGTRKATLTDTV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ Y PD PL HPSPRNQ W HPWF+A+VVP+L++ + ++
Sbjct: 152 HAWRDYGPDVLPLPHPSPRNQAWFKHHPWFDAEVVPELRRRVAPLV 197
>gi|89075371|ref|ZP_01161793.1| hypothetical protein SKA34_16480 [Photobacterium sp. SKA34]
gi|89048920|gb|EAR54489.1| hypothetical protein SKA34_16480 [Photobacterium sp. SKA34]
Length = 195
Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats.
Identities = 83/164 (50%), Positives = 119/164 (72%), Gaps = 1/164 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ R+ ++GQAPG+K ++ + +ND SGDRLR+W+G+D DTFY+ + A++PM
Sbjct: 25 PVIQFSSKTRLLLIGQAPGLKVHQTGIPFNDPSGDRLRQWLGLDKDTFYNPEHIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKGK+GDLPPR A +WHQP+LDL+P+I +T+LIG YAQ YYL K LT+TV
Sbjct: 85 LCYPGKGKTGDLPPRPECAPQWHQPVLDLMPNIGMTLLIGQYAQNYYLRDKPKT-LTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
++++ P Y PL HPSPRN IW+ ++PWFE+ VVP +++ + Q
Sbjct: 144 KQWQQWAPRYIPLPHPSPRNAIWLKKNPWFESDVVPYIRQYVHQ 187
>gi|94493430|ref|ZP_01300634.1| hypothetical protein Rgryl_01001265 [Rickettsiella grylli]
Length = 195
Score = 182 bits (462), Expect = 8e-45, Method: Composition-based stats.
Identities = 86/170 (50%), Positives = 115/170 (67%)
Query: 24 NIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVI 83
N +P+ A +R+ IVGQAPG++ ++ + WND SGDRLR WM VD TFY A+I
Sbjct: 24 NPKPILQAHHLSRLLIVGQAPGVRVHKTGIPWNDPSGDRLRHWMNVDKKTFYDIRQIAII 83
Query: 84 PMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLT 143
PM F YPGKG GDLPPRK A W +L LP+IQLT+LIG YAQ+YYL ++ LT
Sbjct: 84 PMGFCYPGKGPLGDLPPRKECAHFWLDKLLAGLPNIQLTLLIGQYAQRYYLDKQVKANLT 143
Query: 144 DTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
TVA ++ YLP YFPL HPSPRN W+ ++PWF+ ++P L+ + +++
Sbjct: 144 QTVASFEDYLPIYFPLPHPSPRNNRWLKKNPWFQTIILPVLRNVCTALLE 193
>gi|150423675|gb|EDN15617.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 190
Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats.
Identities = 84/166 (50%), Positives = 116/166 (69%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A +A+I I+GQAPG K + + WND SG+RLR+W+G+D +TFY A++PM
Sbjct: 25 PVIRAHPSAKILIIGQAPGTKVHNTSIPWNDASGERLRQWLGLDRETFYCEENIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKG+SGDLPPRK A WH +L+ LP+ QLT+LIG YAQ YYL K S LT+TV
Sbjct: 85 LCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPST-LTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++++ P PL HPSPRN +W+ HPWFE +VP L++ ++Q++
Sbjct: 144 QQWQRWAPSVLPLPHPSPRNTLWLRNHPWFEQDIVPYLRQRVKQVL 189
>gi|73538349|ref|YP_298716.1| Uracil-DNA glycosylase superfamily [Ralstonia eutropha JMP134]
gi|72121686|gb|AAZ63872.1| Uracil-DNA glycosylase superfamily [Ralstonia eutropha JMP134]
Length = 197
Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats.
Identities = 86/160 (53%), Positives = 110/160 (68%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A TAR+ IVGQAPG + ++ + WND SGD+LR W+ + D FY + A++PM
Sbjct: 30 PVVRAAPTARLLIVGQAPGRRVHDTGIPWNDPSGDQLRAWLQMTPDEFYDTSRIAIVPMG 89
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKG SGDLPPR A WH +L +P I+LT+LIG YAQ YYL + LTDTV
Sbjct: 90 FCYPGKGASGDLPPRTECAPLWHAQLLATMPHIRLTLLIGRYAQGYYLQGRLKPTLTDTV 149
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKK 186
A Y YLP + PL HPSPRN++W+ R+PWFEA VVP L++
Sbjct: 150 AAYADYLPQFLPLPHPSPRNRLWLRRNPWFEADVVPLLRQ 189
>gi|153826742|ref|ZP_01979409.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149739457|gb|EDM53695.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 190
Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats.
Identities = 84/166 (50%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A+I I+GQAPG K + + WND SGDRLR+W+ +D DTFY A++PM
Sbjct: 25 PVIRAHSAAKILIIGQAPGTKVHNTSIPWNDASGDRLRQWLDLDRDTFYCEEKIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPG+G+SGDLPPRK A WH +L+ LP+ QLT+LIG YAQ YYL K S LT+TV
Sbjct: 85 LCYPGRGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPST-LTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++++ P PL HPSPRN +W+ HPWFE +VP L++ ++Q++
Sbjct: 144 QQWQRWAPSVLPLPHPSPRNTLWLKNHPWFEQDIVPYLRQRVKQVL 189
>gi|116695781|ref|YP_841357.1| Uracil-dna glycosylase [Ralstonia eutropha H16]
gi|113530280|emb|CAJ96627.1| Uracil-dna glycosylase [Ralstonia eutropha H16]
Length = 205
Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats.
Identities = 84/167 (50%), Positives = 114/167 (68%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ARI IVGQAPGI+ E+ + WND SGDRLR+W+GVD TF FA+IPM
Sbjct: 32 PIVRVGADARILIVGQAPGIRVHETGIPWNDASGDRLRQWLGVDAATFLDESQFAIIPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+GKSGD PPR+ A W +L LP I+LT+L+G YAQ+++L + LT+TV
Sbjct: 92 FCYPGRGKSGDNPPRRECAPLWLDRLLAQLPSIELTLLVGQYAQRHFLGARRKPTLTETV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
+K Y P + PL HPSPRNQ W +HPWFE +V+P L++ + ++++
Sbjct: 152 RAWKDYAPGFVPLPHPSPRNQPWFKQHPWFEDEVLPMLRERVGRLLR 198
>gi|28899689|ref|NP_799294.1| hypothetical protein VP2915 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838909|ref|ZP_01991576.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ3810]
gi|28807941|dbj|BAC61178.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149747617|gb|EDM58541.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ3810]
Length = 190
Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/166 (50%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A K ARI I+GQAPG K + + WND SGDRLR+W+ +D D FY A++PM
Sbjct: 26 PVVQAGKNARILIIGQAPGTKVHSTSIPWNDPSGDRLRQWLDIDKDVFYDPNKIAIVPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKG SGDLPPRK A WH+ IL+ LP+I+LT+LIG ++Q+YYL K LT TV
Sbjct: 86 FCYPGKGNSGDLPPRKECAPTWHKKILEQLPNIELTLLIGQFSQQYYLTNKPKT-LTQTV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ + P++ PL HPSPRN +W+ ++PWFE++VVP +++ + ++
Sbjct: 145 QQWQDWEPEFIPLPHPSPRNTLWLKKNPWFESEVVPYIQQRVHSML 190
>gi|116220161|ref|ZP_01485606.1| hypothetical protein VchoV5_02001795 [Vibrio cholerae V51]
Length = 190
Score = 181 bits (458), Expect = 3e-44, Method: Composition-based stats.
Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A+I I+GQAPG K ++ + WND SG+RLR+W+G+D + FY A++PM
Sbjct: 25 PVIRAHPAAKILIIGQAPGTKVHQTSIPWNDASGERLRQWLGLDREAFYCEENIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKG+SGDLPPRK A WH +L+ LP+ QLT+LIG YAQ YYL K S LT+TV
Sbjct: 85 LCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPST-LTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++++ P PL HPSPRN +W+ HPWFE +VP L++ ++Q++
Sbjct: 144 QQWQRWAPSVLPLPHPSPRNTLWLRNHPWFEQNIVPYLRQRVKQVL 189
>gi|15640295|ref|NP_229922.1| hypothetical protein VC0266 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121586366|ref|ZP_01676155.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727046|ref|ZP_01680237.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147673328|ref|YP_001218522.1| hypothetical protein VC0395_A2644 [Vibrio cholerae O395]
gi|153221465|ref|ZP_01952423.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|153818473|ref|ZP_01971140.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821807|ref|ZP_01974474.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|9654676|gb|AAF93441.1| conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
str. N16961]
gi|121549486|gb|EAX59514.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630557|gb|EAX62947.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124119649|gb|EAY38392.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|126510949|gb|EAZ73543.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520703|gb|EAZ77926.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146315211|gb|ABQ19750.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 190
Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats.
Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A+I I+GQAPG K ++ + WND SG+RLR+W+G+D + FY A++PM
Sbjct: 25 PVIRAHPAAKILIIGQAPGTKVHQTSIPWNDASGERLRQWLGLDREAFYCEENIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKG+SGDLPPRK A WH +L+ LP+ QLT+LIG YAQ YYL K S LT+TV
Sbjct: 85 LCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPST-LTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++++ P PL HPSPRN +W+ HPWFE +VP L++ ++Q++
Sbjct: 144 QQWQRWAPSVLPLPHPSPRNTLWLKNHPWFEQDIVPYLRQRVKQVL 189
>gi|84354557|ref|ZP_00979461.1| COG1573: Uracil-DNA glycosylase [Burkholderia cenocepacia PC184]
gi|107026210|ref|YP_623721.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia AU
1054]
gi|116692606|ref|YP_838139.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia
HI2424]
gi|105895584|gb|ABF78748.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia AU
1054]
gi|116650606|gb|ABK11246.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia
HI2424]
gi|124874802|gb|EAY64792.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184]
Length = 199
Score = 180 bits (456), Expect = 4e-44, Method: Composition-based stats.
Identities = 84/165 (50%), Positives = 108/165 (65%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + ARI IVGQAPG + S + W+D SG RLR W+GVD DTFY FA++PM
Sbjct: 32 PVVRAHRDARILIVGQAPGARVHASGIPWDDASGKRLRGWLGVDADTFYDETRFAIVPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LP ++LT+LIG YAQ+++L LTDTV
Sbjct: 92 FCYPGRGASGDNPPRPECAPLWMDRLLAELPSVRLTLLIGQYAQRHFLRGARKATLTDTV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQI 191
++ Y P PL HPSPRNQ W HPWF+A+VVP+L++ I +
Sbjct: 152 QAWRDYGPAILPLPHPSPRNQAWFKHHPWFDAEVVPELRRRIASL 196
>gi|118708433|ref|ZP_01561017.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia MC0-3]
gi|118653875|gb|EAV60656.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia MC0-3]
Length = 199
Score = 180 bits (456), Expect = 4e-44, Method: Composition-based stats.
Identities = 84/165 (50%), Positives = 108/165 (65%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + ARI IVGQAPG + S + W+D SG RLR W+GVD DTFY FA++PM
Sbjct: 32 PVVRAHRDARILIVGQAPGARVHASGIPWDDASGKRLRGWLGVDADTFYDETRFAIVPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LP ++LT+LIG YAQ+++L LTDTV
Sbjct: 92 FCYPGRGASGDNPPRPECAPLWMDRLLAELPSVRLTLLIGQYAQRHFLRGARKATLTDTV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQI 191
++ Y P PL HPSPRNQ W HPWF+A+VVP+L++ I +
Sbjct: 152 QTWRDYGPAILPLPHPSPRNQAWFKHHPWFDAEVVPELRRRIASL 196
>gi|116216330|ref|ZP_01482198.1| hypothetical protein VchoR_02001895 [Vibrio cholerae RC385]
Length = 190
Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats.
Identities = 83/166 (50%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A+I I+GQAPG K + + WND SG+RLR+W+G+D + FY A++PM
Sbjct: 25 PVIRAHPAAKILIIGQAPGTKVHNTSIPWNDASGERLRQWLGLDREAFYCEENIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKG+SGDLPPRK A WH +L+ LP+ QLT+LIG YAQ YYL K S LTDTV
Sbjct: 85 LCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPST-LTDTV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ + P PL HPSPRN +W+ HPWFE ++P L++ ++Q++
Sbjct: 144 QQWQSWAPSVLPLPHPSPRNTLWLRNHPWFEQDILPYLRQRVKQVL 189
>gi|145297626|ref|YP_001140467.1| uracil-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850398|gb|ABO88719.1| uracil-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 193
Score = 179 bits (454), Expect = 7e-44, Method: Composition-based stats.
Identities = 81/166 (48%), Positives = 111/166 (66%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ++AR+ I+GQAPG + S + W+D SGDRLR W+GVD TFY A++PM
Sbjct: 27 PVIRGKESARLLIIGQAPGTRVHASGIPWDDPSGDRLRHWLGVDKTTFYDESRIAIMPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKGKSGDLPPR A WH +L LLP+I+LT+LIG Y+Q+YYL + LT+TV
Sbjct: 87 LCYPGKGKSGDLPPRPECAPTWHDKVLMLLPNIELTLLIGQYSQQYYLGKAGKGSLTETV 146
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+ Y P + PL HPSPRN W+ ++PWFE V+P L++ + ++
Sbjct: 147 RQWADYCPAWLPLPHPSPRNTFWLRKNPWFEQDVLPHLQQRVAPLL 192
>gi|153830395|ref|ZP_01983062.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148874129|gb|EDL72264.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 190
Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats.
Identities = 82/166 (49%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A+I I+GQAPG K + + WND SG+RLR+W+G+D + FY A++PM
Sbjct: 25 PVIRAHPAAKILIIGQAPGTKVHNTSIPWNDASGERLRQWLGLDREAFYCEENIAIMPMG 84
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKG+SGDLPPRK A WH +L+ LP+ QLT+LIG YAQ YYL K + LT+TV
Sbjct: 85 LCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPNT-LTETV 143
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++++ P PL HPSPRN +W+ HPWFE +VP L++ ++Q++
Sbjct: 144 QQWQRWAPSVLPLPHPSPRNTLWLRNHPWFEQDIVPYLRQRVKQVL 189
>gi|87119969|ref|ZP_01075865.1| hypothetical protein MED121_01975 [Marinomonas sp. MED121]
gi|86164671|gb|EAQ65940.1| hypothetical protein MED121_01975 [Marinomonas sp. MED121]
Length = 196
Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats.
Identities = 90/198 (45%), Positives = 123/198 (62%), Gaps = 6/198 (3%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M L + + I A + E + P+ KTA+I I GQAPG K S + ++D SG
Sbjct: 1 MAELIRLIEDIKACKLCEAHLEHGVRPVVQLNKTAKILIAGQAPGRKVHTSGIPFDDASG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYP----GKGKSGDLPPRKGFAQKWHQPILDLL 116
DRLR WMG+D DTFY A++PM F YP GKGKSGDLPPR A WHQ +L LL
Sbjct: 61 DRLRAWMGIDKDTFYDDSKIAILPMGFCYPGSYKGKGKSGDLPPRPECANTWHQNVLALL 120
Query: 117 PDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWF 176
++L ++IG YAQ YYL ++V +T VA ++K+ P Y PL HPSPRN IW++++ WF
Sbjct: 121 TQVELVLVIGQYAQDYYL--DNNVTVTACVAEWEKHWPHYLPLPHPSPRNNIWLAKNTWF 178
Query: 177 EAQVVPDLKKIIQQIIQS 194
EA ++P L+ + ++ S
Sbjct: 179 EADILPVLQSRVATLLTS 196
>gi|37681333|ref|NP_935942.1| uracil-DNA glycosylase [Vibrio vulnificus YJ016]
gi|37200084|dbj|BAC95913.1| uracil-DNA glycosylase [Vibrio vulnificus YJ016]
Length = 197
Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats.
Identities = 84/169 (49%), Positives = 116/169 (68%), Gaps = 1/169 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A+I I+GQAPG K + + WND SG+RLR W+ ++ TFY A++PM
Sbjct: 26 PVVQAHSEAKILIIGQAPGTKVHHTSIPWNDASGNRLRAWLDIEKPTFYDPKQIAIMPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G+SGDLPPRK A WH+ +L LP+I+LT+LIG YAQ YL K LT+TV
Sbjct: 86 FCYPGRGQSGDLPPRKECAPLWHEALLKHLPNIELTLLIGQYAQNRYLSNKPKT-LTETV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
+++ +LPDY PL HPSPRN +W+ ++PWFE Q VP L++ + Q++ S
Sbjct: 145 QNWQAWLPDYLPLPHPSPRNTLWLRKNPWFEEQTVPYLRQQVHQLLSPS 193
>gi|27364623|ref|NP_760151.1| Uracil-DNA glycosylase [Vibrio vulnificus CMCP6]
gi|27360742|gb|AAO09678.1|AE016800_283 Uracil-DNA glycosylase [Vibrio vulnificus CMCP6]
Length = 197
Score = 177 bits (448), Expect = 4e-43, Method: Composition-based stats.
Identities = 84/169 (49%), Positives = 116/169 (68%), Gaps = 1/169 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A+I I+GQAPG K + + WND SG+RLR W+ ++ TFY A++PM
Sbjct: 26 PVVQAHSEAKILIIGQAPGTKVHHTSIPWNDASGNRLRVWLDIEKPTFYDPKQIAIMPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G+SGDLPPRK A WH+ +L LP+I+LT+LIG YAQ YL K LT+TV
Sbjct: 86 FCYPGRGQSGDLPPRKECAPLWHEALLKHLPNIELTLLIGQYAQNRYLSNKPKT-LTETV 144
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
+++ +LPDY PL HPSPRN +W+ ++PWFE Q VP L++ + Q++ S
Sbjct: 145 QNWQAWLPDYLPLPHPSPRNTLWLRKNPWFEEQTVPYLRQQVHQLLSPS 193
>gi|78062188|ref|YP_372096.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. 383]
gi|77970073|gb|ABB11452.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. 383]
Length = 199
Score = 177 bits (448), Expect = 4e-43, Method: Composition-based stats.
Identities = 84/166 (50%), Positives = 108/166 (65%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + ARI IVGQAPG + S + W+D SG RLR W+ VD DTFY FA++PM
Sbjct: 32 PVVRAHRDARILIVGQAPGARVHASGIPWDDASGKRLRGWLDVDADTFYDETRFAIVPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LP I+LT+LIG YAQ+++L LTDTV
Sbjct: 92 FCYPGRGASGDNPPRPECAPLWIDRLLAELPSIRLTLLIGQYAQRHFLRDTRKATLTDTV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ Y PD PL HPSPRNQ W HPWF+A VVP+L++ + ++
Sbjct: 152 HAWRDYGPDVLPLPHPSPRNQAWFKHHPWFDAAVVPELRRRVAPLV 197
>gi|90413400|ref|ZP_01221393.1| hypothetical protein P3TCK_13406 [Photobacterium profundum 3TCK]
gi|90325642|gb|EAS42111.1| hypothetical protein P3TCK_13406 [Photobacterium profundum 3TCK]
Length = 195
Score = 176 bits (445), Expect = 9e-43, Method: Composition-based stats.
Identities = 80/164 (48%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A A++ I+GQAPG K E+ + WND SG+RLR W+ +D +TFY+ A++PM
Sbjct: 28 PIIQAHSQAKLMIIGQAPGTKVHETGIPWNDPSGERLRRWLDLDSETFYNPQQIAIMPMG 87
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKGKSGDLPPR A +WH +L LLP+I +T++IG YAQ YYL+ K LT+TV
Sbjct: 88 LCYPGKGKSGDLPPRPECATQWHHQVLPLLPNIGMTLVIGQYAQNYYLNNKPKT-LTETV 146
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
++++ P Y P+ HPSPRN +W+ ++PWFE VVP +++ + Q
Sbjct: 147 RAWRQWAPRYIPMPHPSPRNTLWLKKNPWFEEDVVPYIREYVHQ 190
>gi|145590236|ref|YP_001156833.1| Uracil-DNA glycosylase superfamily [Polynucleobacter sp.
QLW-P1DMWA-1]
gi|145048642|gb|ABP35269.1| Uracil-DNA glycosylase superfamily [Polynucleobacter sp.
QLW-P1DMWA-1]
Length = 194
Score = 176 bits (445), Expect = 9e-43, Method: Composition-based stats.
Identities = 79/167 (47%), Positives = 114/167 (68%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +A+I IVGQAPG + E+ + +ND SGDRLREWMG+D + FY A++PM
Sbjct: 28 PIIQVGSSAKILIVGQAPGSRVHETGIPFNDPSGDRLREWMGIDKEVFYDEKKIALVPMG 87
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG GKSGDLPPR A W +L+ LP+I+LTI++G YAQ ++L + + LT+TV
Sbjct: 88 FCFPGTGKSGDLPPRPECADTWRVKLLEQLPNIKLTIIVGQYAQAWHLDKGNKDNLTETV 147
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
+K Y P PL HPSPRN IW+ +PWFE +V+P L++ ++ +++
Sbjct: 148 MAWKSYWPKAIPLPHPSPRNNIWLKNNPWFEEEVLPSLRRKVKAVLK 194
>gi|83716775|ref|YP_438581.1| Uracil DNA glycosylase superfamily superfamily [Burkholderia
thailandensis E264]
gi|83650600|gb|ABC34664.1| Uracil DNA glycosylase superfamily superfamily [Burkholderia
thailandensis E264]
Length = 224
Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats.
Identities = 84/168 (50%), Positives = 112/168 (66%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A ARI IVGQAPG + S + W+D SG RLREW+ VD TFY FA++PM
Sbjct: 48 PVVRADPRARILIVGQAPGARVHASGIPWDDASGKRLREWLNVDDATFYDESLFAIVPMG 107
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LPDI+LT+LIG YAQ+ +L + LT+TV
Sbjct: 108 FCYPGRGASGDNPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKSSLTETV 167
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
+ +Y P++ PL HPSPRNQ W+ +HPWFEA+V+P L+ + +++ S
Sbjct: 168 RAWPEYGPEFIPLAHPSPRNQGWLKQHPWFEAEVLPALRGKVAELLPS 215
>gi|77361963|ref|YP_341537.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas
haloplanktis TAC125]
gi|76876874|emb|CAI89091.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 200
Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/166 (48%), Positives = 114/166 (68%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ARI I GQAPGIK +S + +ND+SG+RLR+W+G+ D FY + A++PM
Sbjct: 34 PVIQFNPNARILIAGQAPGIKVHQSGIPFNDQSGERLRQWLGLTNDQFYDANNIAILPMG 93
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKGKSGDLPPRK A W +L LP++QLTI++G YAQ Y+L + LT+ V
Sbjct: 94 FCYPGKGKSGDLPPRKECAPAWRAQLLAALPNLQLTIVLGKYAQAYHLPDTKKLPLTELV 153
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ Y P + L HPSPRN IW+ ++PWFE +V+P+LKK + +++
Sbjct: 154 KSWRDYWPSHLVLPHPSPRNNIWLKKNPWFEQEVLPELKKRVAEVL 199
>gi|89094466|ref|ZP_01167405.1| hypothetical protein MED92_08901 [Oceanospirillum sp. MED92]
gi|89081202|gb|EAR60435.1| hypothetical protein MED92_08901 [Oceanospirillum sp. MED92]
Length = 194
Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats.
Identities = 84/169 (49%), Positives = 115/169 (68%), Gaps = 4/169 (2%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A +A++ I+GQAPGIK +S + WND SG+RLREW+ +D++ FY + A++PM
Sbjct: 24 PVVQAAPSAKLLIIGQAPGIKVHQSGIPWNDPSGNRLREWLQIDHERFYDPQHIAIMPMG 83
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLH----QKSSVKL 142
F YPGKGKSGDLPPR A+KWHQ +LD LP+I+L +LIG YAQKYYL + L
Sbjct: 84 FCYPGKGKSGDLPPRPECAEKWHQKLLDELPNIELILLIGQYAQKYYLKGSEWGERHQNL 143
Query: 143 TDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQI 191
TD V H YF L HPSPRN+ WM ++ WFE++ +P L+ + ++
Sbjct: 144 TDRVKHANSCPSPYFVLPHPSPRNRHWMQKNAWFESETLPLLRAQLNKL 192
>gi|54310493|ref|YP_131513.1| hypothetical protein PBPRA3427 [Photobacterium profundum SS9]
gi|46914936|emb|CAG21711.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 197
Score = 174 bits (440), Expect = 3e-42, Method: Composition-based stats.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A AR+ I+GQAPG K E+ + WND SG+RLR W+ +D +TFY A++PM
Sbjct: 28 PIIQAHSQARLMIIGQAPGTKVHETGIPWNDPSGERLRRWLDLDSETFYDPQQIAIMPMG 87
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKGKSGDLPPR A +WH +L LLP+I +T++IG YAQ YYL+ K LT+TV
Sbjct: 88 LCYPGKGKSGDLPPRPECAPQWHHQVLPLLPNIGMTLVIGQYAQNYYLNNKPKT-LTETV 146
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
++++ P Y PL HPSPRN W+ ++PWFE VVP +++ + Q ++ +
Sbjct: 147 RAWRQWAPRYIPLPHPSPRNTQWLKKNPWFEDDVVPYIREYVHQHLKGT 195
>gi|117621213|ref|YP_858181.1| uracil-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562620|gb|ABK39568.1| uracil-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 193
Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats.
Identities = 80/166 (48%), Positives = 108/166 (65%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ + AR+ I+GQAPG + S + W+D SGDRLR+W+GVD TFY A++PM
Sbjct: 27 PVIRGSERARLLIIGQAPGTRVHASGIPWDDPSGDRLRQWLGVDKATFYDESRIAIMPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPGKGKSGDLPPR A WH +L LLP+I+LT+LIG YAQ YYL + LT+TV
Sbjct: 87 LCYPGKGKSGDLPPRPECAPTWHDKVLMLLPNIELTLLIGQYAQAYYLRDAAKGSLTETV 146
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+ Y P + PL HPSPRN W+ ++ WFE V+ L++ + ++
Sbjct: 147 RSWADYGPAWLPLPHPSPRNTFWLKKNLWFEQDVISHLQQRVAPLL 192
>gi|118037628|ref|ZP_01509034.1| Uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN]
gi|117992437|gb|EAV06729.1| Uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN]
Length = 203
Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 116/185 (62%)
Query: 2 TSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGD 61
TSL+ + + I A + P+ AA AR+ I+GQAPG + S + W+D SG
Sbjct: 8 TSLDNLLREIRACTLCSPALPHAPRPVLAASAQARVLIIGQAPGARVHASGVPWSDASGA 67
Query: 62 RLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQL 121
RLR W+ VD TFY + FAV+P+ F +PG+G SGDLPPR A +WH+ +L + ++L
Sbjct: 68 RLRAWLDVDDTTFYDTSKFAVVPIGFCFPGRGASGDLPPRPECAARWHEELLAHMSSVRL 127
Query: 122 TILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVV 181
T+L+G YAQ++ L + LTDT+ ++++ P PL HPSPRN W R+PWFEA V+
Sbjct: 128 TLLVGQYAQRFGLGKAFGPTLTDTLVRWREFGPQVVPLPHPSPRNIAWFKRNPWFEASVL 187
Query: 182 PDLKK 186
P L++
Sbjct: 188 PTLRE 192
>gi|120554746|ref|YP_959097.1| Uracil-DNA glycosylase superfamily [Marinobacter aquaeolei VT8]
gi|120324595|gb|ABM18910.1| Uracil-DNA glycosylase superfamily [Marinobacter aquaeolei VT8]
Length = 198
Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/166 (46%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +++RI +VGQAPG + E+ L +ND SGDRLR+WMG+ DTFY A++PM
Sbjct: 33 PVIQLSESSRILVVGQAPGRRVHETGLPFNDPSGDRLRQWMGITRDTFYDEQKLAILPMG 92
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG GKSGDLPPR A W Q +LD LP+I+LT+LIG YA +++ + +T+ V
Sbjct: 93 FCYPGTGKSGDLPPRPECAPAWRQALLDRLPEIRLTLLIGQYAHAWHI-PGARRAVTENV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++++ PD P+ HPSPRN +W+ ++PWFEA+VVP ++ + I+
Sbjct: 152 RQWQQFWPDVIPMPHPSPRNNLWLRKNPWFEAEVVPAIQARVASIL 197
>gi|34497814|ref|NP_902029.1| probable uracil-DNA glycosylase [Chromobacterium violaceum ATCC
12472]
gi|34103670|gb|AAQ60031.1| probable uracil-DNA glycosylase [Chromobacterium violaceum ATCC
12472]
Length = 193
Score = 171 bits (432), Expect = 3e-41, Method: Composition-based stats.
Identities = 78/166 (46%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P A ARI + GQAPG K ES + W+D SG RLREW+ VD +TFY FA++PM
Sbjct: 27 PALRAAAGARILLAGQAPGRKVHESGVPWDDASGKRLREWLAVDAETFYDPECFAIVPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG G SGDLPPR + WH +L LL ++L + +G YAQ Y+L + LT+TV
Sbjct: 87 FCYPGTGPSGDLPPRPECRRLWHPRLLPLLERVELVLAVGYYAQAYHLAARKR-SLTETV 145
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
A +++Y P PL HPSPRNQ+W++R+ WFE++++P L+ + +++
Sbjct: 146 AAWREYFPAVMPLPHPSPRNQMWLARNRWFESELLPALRARVAEVL 191
>gi|127513287|ref|YP_001094484.1| Uracil-DNA glycosylase superfamily [Shewanella loihica PV-4]
gi|126638582|gb|ABO24225.1| Uracil-DNA glycosylase superfamily [Shewanella loihica PV-4]
Length = 196
Score = 171 bits (432), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/192 (42%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
Query: 1 MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
M +L+++ + I + + P+ A +A++ IVGQAPG KA S L ++D SG
Sbjct: 1 METLDQLLERIACCQICQPHLSHKVRPVLQAASSAKVLIVGQAPGTKAAASGLPFDDPSG 60
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQ 120
DRLR+W+GV + FY S FA++PM F YPGKG+SGDLPPR A W +P+L L +IQ
Sbjct: 61 DRLRDWLGVSREQFYDSSLFAIVPMGFCYPGKGRSGDLPPRGECAPAWREPLLAHLKNIQ 120
Query: 121 LTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQV 180
LT++IG YAQ Y+ ++ +T+ V ++++ PL HPSPRN +W+ R+PWFE ++
Sbjct: 121 LTLVIGQYAQAYHFGKQCG-GVTECVQGWQQHGSHIMPLPHPSPRNNLWLRRNPWFEIEL 179
Query: 181 VPDLKKIIQQII 192
+P LK + I
Sbjct: 180 LPVLKARVASAI 191
>gi|149911168|ref|ZP_01899793.1| Uracil-DNA glycosylase [Moritella sp. PE36]
gi|149805769|gb|EDM65766.1| Uracil-DNA glycosylase [Moritella sp. PE36]
Length = 200
Score = 171 bits (432), Expect = 3e-41, Method: Composition-based stats.
Identities = 85/194 (43%), Positives = 123/194 (63%), Gaps = 8/194 (4%)
Query: 7 ITKAIMADSQNKVFTEKNI----EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDR 62
I I++D + E ++ P+ A K A+I I GQAPGI+ +S + + D SGDR
Sbjct: 5 ILDTIVSDVRKCTLCEPDLPLGARPVLQADKKAKILIAGQAPGIRVHKSGIPFTDPSGDR 64
Query: 63 LREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLT 122
LR+WMG+D DTFY + A++PM F YPG GKSGDLPPR A+ W IL +P+I+L
Sbjct: 65 LRQWMGIDKDTFYDATKIAILPMGFCYPGTGKSGDLPPRPECAKTWRAEILAAMPNIELI 124
Query: 123 ILIGNYAQKYYLHQKSSVKLTDTVAHYKKY----LPDYFPLVHPSPRNQIWMSRHPWFEA 178
++IG YAQK+++ LT+TV +++ Y P+ PL HPSPRN IW+ ++PWFE
Sbjct: 125 LVIGIYAQKWHMGDVKQKNLTETVKNWRDYWQKNWPERLPLPHPSPRNNIWLKKNPWFEL 184
Query: 179 QVVPDLKKIIQQII 192
V+P L+ + Q++
Sbjct: 185 DVIPHLQARVAQLM 198
>gi|94313480|ref|YP_586689.1| uracil-DNA glycosylase superfamily [Ralstonia metallidurans CH34]
gi|93357332|gb|ABF11420.1| uracil-DNA glycosylase superfamily [Ralstonia metallidurans CH34]
Length = 201
Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats.
Identities = 77/163 (47%), Positives = 110/163 (67%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ T+RI I+GQAPG + S + ++D SGDRLREW G+ +D FY + A++PM
Sbjct: 36 PVVQFSATSRILIIGQAPGSRVHASGIPFDDPSGDRLREWTGLSHDVFYDASRVAIMPMG 95
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKG SGDLPPR+ A WH IL LLP+ +LT+L+G+YAQ YYL + +T+ V
Sbjct: 96 FCYPGKGPSGDLPPRRECAPLWHDAILRLLPEDRLTLLVGSYAQAYYLQGEVGATMTEIV 155
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQ 189
++++ P+ FPL HPS R WM + PWFEA+++P L+ ++
Sbjct: 156 RDFRRFGPNLFPLPHPSWRVVGWMRKQPWFEAELLPALRAAVR 198
>gi|83644737|ref|YP_433172.1| Uracil-DNA glycosylase [Hahella chejuensis KCTC 2396]
gi|83632780|gb|ABC28747.1| Uracil-DNA glycosylase [Hahella chejuensis KCTC 2396]
Length = 221
Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats.
Identities = 78/184 (42%), Positives = 120/184 (65%), Gaps = 3/184 (1%)
Query: 11 IMADSQNKVFTEKNIEP--LFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMG 68
++ D + E+++EP + A TAR+ I+GQAPG + + + WND SGDRLR W+G
Sbjct: 33 LLQDVRACRLCEQHLEPNPIVKAGSTARLMIIGQAPGTRVHATGIPWNDPSGDRLRAWLG 92
Query: 69 VDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNY 128
+D +TFY + A++PM F YPGKG+SGDLPPRK + WH IL LP +++ +L+G Y
Sbjct: 93 LDKETFYDTRRIAIMPMGFCYPGKGRSGDLPPRKECYEHWHHKILARLPRLEVFLLVGLY 152
Query: 129 AQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKII 188
AQ+ YL + L++ V H++ + P PL HPSPRN +W+ + PWFE +V+P ++ +
Sbjct: 153 AQQAYL-PNAYKSLSENVKHWRDWYPRLIPLPHPSPRNTLWLKQRPWFEEEVIPQVRNHV 211
Query: 189 QQII 192
++
Sbjct: 212 HDLL 215
>gi|53723012|ref|YP_111997.1| hypothetical protein BPSS1991 [Burkholderia pseudomallei K96243]
gi|76817382|ref|YP_336257.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1710b]
gi|126443236|ref|YP_001063849.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668]
gi|52213426|emb|CAH39469.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|76581855|gb|ABA51329.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1710b]
gi|126222727|gb|ABN86232.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668]
Length = 224
Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats.
Identities = 81/168 (48%), Positives = 110/168 (65%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A ARI IVGQAPG + S + W+D SG RLR W+ VD TFY FA++PM
Sbjct: 48 PVVRAHPGARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMG 107
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LPDI+LT+LIG YAQ+ +L + LT+TV
Sbjct: 108 FCYPGRGASGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETV 167
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
+ +Y P++ PL HPSPRNQ W+ +HPWF+A V+P L+ + +++ +
Sbjct: 168 RAWPEYAPEFIPLPHPSPRNQGWLKQHPWFDADVLPALRDRVAELLPT 215
>gi|71906932|ref|YP_284519.1| hypothetical protein Daro_1297 [Dechloromonas aromatica RCB]
gi|71846553|gb|AAZ46049.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
Length = 192
Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats.
Identities = 78/166 (46%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A ++ARI + GQAPG K S + ++D SGDRLR+W+GV + FY A++PM
Sbjct: 27 PVLQAARSARILVAGQAPGRKVHASGVPFDDASGDRLRQWLGVSREIFYDPARIAILPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG GKSGDLPPR A W Q +L L I++T++IG YAQ Y+L + LTDTV
Sbjct: 87 FCFPGTGKSGDLPPRPECAPAWRQRVLAELGQIEMTLVIGQYAQAYHLPDATG-NLTDTV 145
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++++ P PL HPSPRN +W+SR+PWFEA+V+P L++ + +++
Sbjct: 146 RDWRRHWPAVLPLPHPSPRNNLWLSRNPWFEAEVLPALRQRVAEVL 191
>gi|89902887|ref|YP_525358.1| Uracil-DNA glycosylase superfamily [Rhodoferax ferrireducens T118]
gi|89347624|gb|ABD71827.1| Uracil-DNA glycosylase superfamily [Rhodoferax ferrireducens DSM
15236]
Length = 201
Score = 169 bits (427), Expect = 9e-41, Method: Composition-based stats.
Identities = 77/166 (46%), Positives = 106/166 (63%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + ARI IVGQAPG++ + + W+D SG+RLR WMGVD FY A+IPM
Sbjct: 34 PVLRAGEAARILIVGQAPGVRVHTTGIPWDDPSGERLRAWMGVDKALFYDESRIAIIPMG 93
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
+ YPG+ + GDLPPR+ A W +L +P I+LT+L+G YAQ ++L + LT+T
Sbjct: 94 YCYPGRARGGDLPPRRECAALWLDQLLSRMPRIELTLLVGQYAQHHFLGSRRKPSLTETT 153
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+++Y P + PL HPSPRNQ W +H WFE VVP L+ I +I
Sbjct: 154 MAWREYAPRFIPLPHPSPRNQPWFKQHAWFEEDVVPALQARINAMI 199
>gi|126455816|ref|YP_001076735.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
1106a]
gi|126229584|gb|ABN92997.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
1106a]
Length = 224
Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats.
Identities = 80/168 (47%), Positives = 110/168 (65%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A ARI IVGQAPG + S + W+D SG RLR W+ V+ TFY FA++PM
Sbjct: 48 PVVRAHPGARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVNDATFYDESLFAIVPMG 107
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG+G SGD PPR A W +L LPDI+LT+LIG YAQ+ +L + LT+TV
Sbjct: 108 FCYPGRGASGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETV 167
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
+ +Y P++ PL HPSPRNQ W+ +HPWF+A V+P L+ + +++ +
Sbjct: 168 RAWPEYAPEFIPLPHPSPRNQGWLKQHPWFDADVLPALRDRVAELLPT 215
>gi|153885510|ref|ZP_02006667.1| Uracil-DNA glycosylase superfamily [Ralstonia pickettii 12D]
gi|151578410|gb|EDN42809.1| Uracil-DNA glycosylase superfamily [Ralstonia pickettii 12D]
Length = 205
Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats.
Identities = 76/162 (46%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + AR+ I+GQAPG E+ + WND+SGDRLR+W+ + YD FY AV+PM
Sbjct: 36 PVVVADRRARVLIIGQAPGRIVHETGIPWNDRSGDRLRQWLQISYDDFYADRRIAVVPMG 95
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG G +GDLPPR A +WH+P+L +P+++LT+L+G YAQ+ YL LTD V
Sbjct: 96 FCFPGTGANGDLPPRPECAPRWHRPLLTAMPEVRLTLLVGTYAQRNYLDVPRDWTLTDVV 155
Query: 147 AHYKKYLPD---YFPLVHPSPRNQIWMSRHPWFEAQVVPDLK 185
+ + D FPL HPSPRN W +PWF+A +VP L+
Sbjct: 156 RNGPAHDADGRVLFPLPHPSPRNLAWFKHNPWFDAHIVPALR 197
>gi|90294122|ref|ZP_01213718.1| hypothetical protein Bpse17_02001161 [Burkholderia pseudomallei
1710a]
gi|100064450|ref|ZP_01325859.1| hypothetical protein BpseP_03000338 [Burkholderia pseudomallei
Pasteur]
gi|100125319|ref|ZP_01330695.1| hypothetical protein BpseS_03001140 [Burkholderia pseudomallei S13]
gi|100235364|ref|ZP_01336113.1| hypothetical protein Bpse4_03001363 [Burkholderia pseudomallei
406e]
Length = 175
Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats.
Identities = 79/160 (49%), Positives = 107/160 (66%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGK 94
ARI IVGQAPG + S + W+D SG RLR W+ VD TFY FA++PM F YPG+G
Sbjct: 7 ARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPGRGA 66
Query: 95 SGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLP 154
SGD PPR A W +L LPDI+LT+LIG YAQ+ +L + LT+TV + +Y P
Sbjct: 67 SGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAP 126
Query: 155 DYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
++ PL HPSPRNQ W+ +HPWF+A V+P L+ + +++ +
Sbjct: 127 EFIPLPHPSPRNQGWLKQHPWFDADVLPALRDRVAELLPT 166
>gi|86134616|ref|ZP_01053198.1| hypothetical protein MED152_07890 [Tenacibaculum sp. MED152]
gi|85821479|gb|EAQ42626.1| hypothetical protein MED152_07890 [Polaribacter dokdonensis MED152]
Length = 190
Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/190 (42%), Positives = 124/190 (65%), Gaps = 5/190 (2%)
Query: 9 KAIMADSQNKVFTEKNIE----PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLR 64
+ ++A+ +N E +++ P+ AA + ++I ++ QAPG A W+D SG LR
Sbjct: 2 QKLLAEIRNCKLCEPHLDLGARPIIAASENSKILLISQAPGRIAHLKNKAWDDPSGKVLR 61
Query: 65 EWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTIL 124
+W+ VD FY++ +FA++P F +PGKGKSGD PRK A WH ++ ++QL IL
Sbjct: 62 KWLHVDESQFYNTDHFAILPAGFCFPGKGKSGDKLPRKECAPLWHSKVMHQFKNVQLKIL 121
Query: 125 IGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDL 184
IGNYAQ YYL K LT+TV +Y+ +LP+Y L HPSPRN+ W+ ++PWF +V+PDL
Sbjct: 122 IGNYAQTYYLKNKPRT-LTETVKNYQSFLPEYLVLPHPSPRNRFWIQKNPWFTNEVIPDL 180
Query: 185 KKIIQQIIQS 194
+K++ +I+ +
Sbjct: 181 QKVVTKILST 190
>gi|99913571|ref|ZP_01320191.1| hypothetical protein Bpse1_03000321 [Burkholderia pseudomallei
1655]
Length = 175
Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats.
Identities = 79/160 (49%), Positives = 107/160 (66%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGK 94
ARI IVGQAPG + S + W+D SG RLR W+ VD TFY FA++PM F YPG+G
Sbjct: 7 ARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPGRGA 66
Query: 95 SGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLP 154
SGD PPR A W +L LPDI+LT+LIG YAQ+ +L + LT+TV + +Y P
Sbjct: 67 SGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAP 126
Query: 155 DYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
++ PL HPSPRNQ W+ +HPWF+A V+P L+ + +++ +
Sbjct: 127 EFIPLPHPSPRNQGWLKQHPWFDAGVLPALRDRVAELLPT 166
>gi|120437679|ref|YP_863365.1| uracil-DNA glycosylase family protein [Gramella forsetii KT0803]
gi|117579829|emb|CAL68298.1| uracil-DNA glycosylase family protein [Gramella forsetii KT0803]
Length = 188
Score = 167 bits (422), Expect = 4e-40, Method: Composition-based stats.
Identities = 78/167 (46%), Positives = 112/167 (67%), Gaps = 2/167 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A K ++I ++ QAPG ES + WND+SG +LREW+GV+ + FY FAV+PM
Sbjct: 24 PIIEAAKNSKIVLISQAPGRIVHESGIAWNDQSGKKLREWLGVNENIFYKVDNFAVLPMG 83
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGK K+GDLPPRK A WH + ++QL I+IG+YA YYL ++ + LT+ V
Sbjct: 84 FCYPGKAKTGDLPPRKECAPLWHDVVWSEFKNVQLKIIIGSYAANYYLGKEQN--LTEKV 141
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
YK++LP+++ L HPSP N+ W ++PWFE VVP L+ I +I++
Sbjct: 142 QDYKRFLPEFWTLPHPSPVNRFWRMKNPWFEEGVVPKLQDKIAEILK 188
>gi|119470680|ref|ZP_01613348.1| putative uracil-DNA glycosylase family protein [Alteromonadales
bacterium TW-7]
gi|119446150|gb|EAW27428.1| putative uracil-DNA glycosylase family protein [Alteromonadales
bacterium TW-7]
Length = 196
Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats.
Identities = 81/189 (42%), Positives = 119/189 (62%), Gaps = 4/189 (2%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
+E+++K ++ + + P+ ARI I GQAPGIK E+ +ND SG+RL
Sbjct: 7 IEQVSKCVICEPHLPL----GARPVIQFNANARILIAGQAPGIKVHETGKPFNDASGNRL 62
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
REW+G+ D FY A++PM F YPGKGKSGDLPPRK A W +L LP+++LTI
Sbjct: 63 REWLGLSVDEFYDPQTIAILPMGFCYPGKGKSGDLPPRKECAPAWRAQLLAALPNLELTI 122
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPD 183
++G YAQ Y+L + LT+ V +++Y P++ L HPSPRN IW+ ++PWF V+P+
Sbjct: 123 VLGKYAQAYHLPHTKNRPLTELVKSWREYWPEHLVLPHPSPRNNIWLKKNPWFAEDVLPE 182
Query: 184 LKKIIQQII 192
L + + I+
Sbjct: 183 LAERVAAIL 191
>gi|91790977|ref|YP_551928.1| Uracil-DNA glycosylase superfamily [Polaromonas sp. JS666]
gi|91700857|gb|ABE47030.1| Uracil-DNA glycosylase superfamily [Polaromonas sp. JS666]
Length = 194
Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats.
Identities = 82/167 (49%), Positives = 111/167 (66%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +TARI I+ QAPG K S + W+D+SG RLREW+G+ FY+ A++PM
Sbjct: 28 PVVQFGRTARILIISQAPGTKVHASGIPWDDQSGARLREWLGISPQDFYNPEKVAIMPMG 87
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKGKSGDLPPR A WH IL LP +LT+L+G+YAQ YYL Q + LTD V
Sbjct: 88 FCYPGKGKSGDLPPRPECAPLWHDRILAQLPPDRLTLLVGSYAQAYYLPQTAHRLLTDKV 147
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
+ +LP +F L HPS R WM+R+PWFE++V+P L+ +Q+ ++
Sbjct: 148 EAFASFLPAFFLLPHPSWRCVSWMARNPWFESKVLPVLRDTVQKSLE 194
>gi|17546048|ref|NP_519450.1| hypothetical protein RSc1329 [Ralstonia solanacearum GMI1000]
gi|17428344|emb|CAD15031.1| probable uracil-dna glycosylase protein [Ralstonia solanacearum]
Length = 198
Score = 166 bits (420), Expect = 6e-40, Method: Composition-based stats.
Identities = 77/159 (48%), Positives = 103/159 (64%), Gaps = 3/159 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + AR+ IVGQAPG E+ + WND+SGDRLREW+ + YD FY AV+PM
Sbjct: 29 PVVLADRRARVLIVGQAPGRIVHETGIPWNDRSGDRLREWLRIGYDAFYADRRIAVVPMG 88
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG G +GDLPPR A +WH+P+L +PD++L +L+G YAQ+YYL + LT+ V
Sbjct: 89 FCFPGTGPNGDLPPRPACAPQWHRPLLTAMPDLKLALLVGGYAQRYYLDVPRGMPLTEVV 148
Query: 147 AHYKKYLPD---YFPLVHPSPRNQIWMSRHPWFEAQVVP 182
+ FPL HPSPRN W +PWF+AQ+VP
Sbjct: 149 RRGPVRDAEGRVLFPLPHPSPRNLAWFKHNPWFDAQIVP 187
>gi|83748542|ref|ZP_00945562.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum
UW551]
gi|83724750|gb|EAP71908.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum
UW551]
Length = 206
Score = 166 bits (420), Expect = 7e-40, Method: Composition-based stats.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + AR+ IVGQAPG E+ + WND+SGDRLR+W+ + YD FY AV+PM
Sbjct: 36 PIVMADRRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQWLQIGYDDFYADKRIAVVPMG 95
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG G SGDLPPR A +WH+P+L +P+++L +L+G YAQ+YYL LTD V
Sbjct: 96 FCFPGTGPSGDLPPRPECAPQWHRPLLTAMPELKLALLVGGYAQRYYLDVPPGWSLTDVV 155
Query: 147 AHYKKYLPD---YFPLVHPSPRNQIWMSRHPWFEAQVVPDLK 185
H + FPL HPSPRN W +PWF+A++VP L+
Sbjct: 156 RHGPVRDAEGRVLFPLPHPSPRNLAWFKHNPWFDARIVPQLR 197
>gi|56461599|ref|YP_156880.1| Uracil-DNA glycosylase [Idiomarina loihiensis L2TR]
gi|56180609|gb|AAV83331.1| Uracil-DNA glycosylase [Idiomarina loihiensis L2TR]
Length = 196
Score = 166 bits (420), Expect = 7e-40, Method: Composition-based stats.
Identities = 80/166 (48%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ARI + GQAPG + S ++D SGDRLR+WMG+D DTFY++ A+IPM
Sbjct: 32 PVVQLHPKARILVAGQAPGKRVHASGKPFDDPSGDRLRQWMGIDKDTFYNAEELAIIPMG 91
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG GKSGDLPPR A W + IL LP+++L + IG YAQ+++L Q+ LT+ V
Sbjct: 92 FCYPGTGKSGDLPPRPECAPTWREQILQQLPNLELILAIGQYAQQWHL-QEPKRSLTERV 150
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ Y P PL HPSPRN IWM R+PWFE +V+P+L++ +++++
Sbjct: 151 RDWRSYWPQLLPLPHPSPRNNIWMKRNPWFETEVIPELRQRVKELL 196
>gi|86142681|ref|ZP_01061120.1| hypothetical protein MED217_07196 [Flavobacterium sp. MED217]
gi|85830713|gb|EAQ49171.1| hypothetical protein MED217_07196 [Leeuwenhoekiella blandensis
MED217]
Length = 188
Score = 166 bits (419), Expect = 8e-40, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 113/176 (64%), Gaps = 2/176 (1%)
Query: 18 KVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHS 77
K F P+ +A ++I + QAPG A E + W+D SG RLR W+GV+ DTFY+
Sbjct: 15 KPFLPLGANPIISASPKSKIVLASQAPGKIAHEKSIAWDDPSGRRLRAWLGVNEDTFYNP 74
Query: 78 GYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQK 137
FAV+P+ F +PGKGK+GDLPPR A WHQ ++D L ILIGN+AQ YYL K
Sbjct: 75 DNFAVLPLGFCFPGKGKTGDLPPRPECAPLWHQKVIDHFEADPLYILIGNHAQSYYLQDK 134
Query: 138 SSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
S LT + +++ YLP YF L HPSP N WM+++ WFE+ V+P L++ I+Q +Q
Sbjct: 135 RS--LTKRIQNFEAYLPKYFVLPHPSPVNHFWMNKNKWFESDVIPQLQQEIKQRLQ 188
>gi|85373551|ref|YP_457613.1| hypothetical protein ELI_03620 [Erythrobacter litoralis HTCC2594]
gi|84786634|gb|ABC62816.1| hypothetical protein ELI_03620 [Erythrobacter litoralis HTCC2594]
Length = 189
Score = 166 bits (419), Expect = 9e-40, Method: Composition-based stats.
Identities = 80/167 (47%), Positives = 108/167 (64%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TAR+ I+GQAPG S + W+D SGDRLREW G+D T Y A++PM
Sbjct: 23 PVATFSSTARLLIIGQAPGSAVHASGIPWDDPSGDRLREWAGIDKATMYDPARVALVPMG 82
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKGKSGDLPPR A WH+ +L LP +LT+L+G+YAQ YYL L + V
Sbjct: 83 FCYPGKGKSGDLPPRPECAPAWHERVLAELPCDRLTLLVGSYAQAYYLPDTRKQTLAERV 142
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
++ +LP +FPL HPS R+ ++M ++PWFE V+P LK+ I + I+
Sbjct: 143 REFETFLPVFFPLPHPSWRSTLFMRKNPWFEKDVLPVLKRRIAEAIR 189
>gi|90662240|ref|ZP_01250075.1| hypothetical protein Bpse110_02005917 [Burkholderia pseudomallei
1106b]
Length = 175
Score = 166 bits (419), Expect = 9e-40, Method: Composition-based stats.
Identities = 78/160 (48%), Positives = 107/160 (66%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGK 94
ARI IVGQAPG + S + W+D SG RLR W+ V+ TFY FA++PM F YPG+G
Sbjct: 7 ARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVNDATFYDESLFAIVPMGFCYPGRGA 66
Query: 95 SGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLP 154
SGD PPR A W +L LPDI+LT+LIG YAQ+ +L + LT+TV + +Y P
Sbjct: 67 SGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAP 126
Query: 155 DYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
++ PL HPSPRNQ W+ +HPWF+A V+P L+ + +++ +
Sbjct: 127 EFIPLPHPSPRNQGWLKQHPWFDADVLPALRDRVAELLPT 166
>gi|126664640|ref|ZP_01735624.1| hypothetical protein MELB17_02340 [Marinobacter sp. ELB17]
gi|126630966|gb|EBA01580.1| hypothetical protein MELB17_02340 [Marinobacter sp. ELB17]
Length = 200
Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ++ARI +VGQAPG + E+ L +ND SGDRLR+WMG+ + FY A++PM
Sbjct: 33 PVIQMAESARILVVGQAPGRRVHETGLPFNDPSGDRLRQWMGIGREPFYDERQLAILPMG 92
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPG GK+GDLPPR AQ W +L LP++ +T++IG YA ++L + +T V
Sbjct: 93 FCYPGSGKNGDLPPRPECAQAWRSALLQRLPNVAMTLVIGQYAHNWHLANPAGT-VTANV 151
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+++ Y P P+ HPSPRN +W+ R+PWFEA+VVP L++ I ++
Sbjct: 152 QNWRAYWPAQMPMPHPSPRNNLWLRRNPWFEAEVVPALQQRIAGLL 197
>gi|74316863|ref|YP_314603.1| hypothetical protein Tbd_0845 [Thiobacillus denitrificans ATCC
25259]
gi|74056358|gb|AAZ96798.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 228
Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats.
Identities = 75/159 (47%), Positives = 101/159 (63%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A +AR+ IVGQAPG + + + WND SGDRLR+W+G+ D FY + A++P
Sbjct: 54 PVLRASPSARLLIVGQAPGRRVHATGIPWNDPSGDRLRDWLGLTRDAFYDASRIAIVPAG 113
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
YPG DLPPR A +W P+ +P I LT+LIG YAQ YYL ++ LT+TV
Sbjct: 114 LCYPGTVGGSDLPPRAECASRWQPPLRAAMPKIGLTLLIGAYAQAYYLGRQRRTTLTETV 173
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLK 185
++ P FPL HPSPRN+ W +HPWF+A+VVP L+
Sbjct: 174 EAWRDLDPALFPLPHPSPRNRRWFKQHPWFDAEVVPALR 212
>gi|149922039|ref|ZP_01910480.1| hypothetical protein PPSIR1_24229 [Plesiocystis pacifica SIR-1]
gi|149817091|gb|EDM76572.1| hypothetical protein PPSIR1_24229 [Plesiocystis pacifica SIR-1]
Length = 194
Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats.
Identities = 73/168 (43%), Positives = 110/168 (65%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ARI I GQAPG + ++D SG+RLR+W+GVD TFY + FAV+PM
Sbjct: 26 PIVQLDARARILIAGQAPGRLTHAKGVPFDDPSGERLRDWLGVDRATFYDASKFAVVPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG GKSGDLPPR A++W +P+L+ LP + LT+++G +A ++L + LT V
Sbjct: 86 FCFPGSGKSGDLPPRPECAERWREPVLEALPAVALTLVLGRHAMAWHLGLERRATLTSVV 145
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
++ P++ PL HPSPRN+ W + +PWFEA+V+P L+ + +++ S
Sbjct: 146 EGWRARWPEHLPLPHPSPRNRRWFANNPWFEAEVLPVLRGRVAELLGS 193
>gi|121531084|ref|ZP_01663691.1| conserved hypothetical protein [Ralstonia pickettii 12J]
gi|121302005|gb|EAX42976.1| conserved hypothetical protein [Ralstonia pickettii 12J]
Length = 205
Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats.
Identities = 75/162 (46%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + AR+ I+GQAPG E+ + WND+SGDRLR+W+ + YD FY AV+PM
Sbjct: 36 PVVVADRRARVLIIGQAPGRIVHETGIPWNDRSGDRLRQWLQISYDDFYADRRIAVVPMG 95
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG G +GDLPPR A +WH+P+L +PD++L +L+G YAQ+ YL LTD V
Sbjct: 96 FCFPGTGANGDLPPRPECAPRWHRPLLTAMPDVKLALLVGTYAQRNYLDVPRDWSLTDVV 155
Query: 147 AHYKKYLPD---YFPLVHPSPRNQIWMSRHPWFEAQVVPDLK 185
+ D PL HPSPRN W +PWF+A +VP L+
Sbjct: 156 RNGPVQDADGRVLLPLPHPSPRNLAWFKHNPWFDAHIVPTLR 197
>gi|114562086|ref|YP_749599.1| Uracil-DNA glycosylase superfamily [Shewanella frigidimarina NCIMB
400]
gi|114333379|gb|ABI70761.1| Uracil-DNA glycosylase superfamily [Shewanella frigidimarina NCIMB
400]
Length = 206
Score = 163 bits (412), Expect = 6e-39, Method: Composition-based stats.
Identities = 79/166 (47%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
Query: 25 IEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIP 84
+ P+ A++ I+GQAPG K S + ++D SGDRLR W+GV D FY + A++P
Sbjct: 33 VRPVVQIDPQAKVLIIGQAPGRKVHLSGIPFDDASGDRLRLWLGVTKDVFYDAKQIAIMP 92
Query: 85 MDFYYP------GKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKS 138
M F YP GKGKSGDLPPR A KWH +L L +++L +L+G YAQ+YYL K
Sbjct: 93 MGFCYPGSYAASGKGKSGDLPPRPECAPKWHDLLLQQLVNVKLILLVGQYAQQYYLADKP 152
Query: 139 SVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDL 184
LT+TV ++++ P Y PL HPSPRN IW+SR+PWFE +++ D+
Sbjct: 153 KT-LTETVQQWRRFGPRYIPLPHPSPRNNIWLSRNPWFEDELLSDI 197
>gi|149186996|ref|ZP_01865304.1| hypothetical protein ED21_25141 [Erythrobacter sp. SD-21]
gi|148829385|gb|EDL47828.1| hypothetical protein ED21_25141 [Erythrobacter sp. SD-21]
Length = 172
Score = 163 bits (412), Expect = 6e-39, Method: Composition-based stats.
Identities = 73/164 (44%), Positives = 111/164 (67%)
Query: 25 IEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIP 84
+ P+ + TAR+ I+GQAPG ++ + W+DKSGDRLREW G+ + Y A++P
Sbjct: 5 VRPVASFSPTARLLIIGQAPGSIVHQTGIPWDDKSGDRLREWTGLSKEQMYDPTRVALVP 64
Query: 85 MDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTD 144
M F YPGK GD PPR A +WH+ +LD+LP+ +LT+L+G YAQ YYL + +T+
Sbjct: 65 MGFCYPGKASGGDKPPRPECAPQWHRRVLDVLPEDRLTLLVGTYAQSYYLPDARKLSMTE 124
Query: 145 TVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKII 188
V ++++LP + PL HP+ R+ IWM ++PWFEA+V+P L++ +
Sbjct: 125 RVRRFREFLPRFLPLPHPAWRSAIWMKQNPWFEAEVLPVLRQAV 168
>gi|30249111|ref|NP_841181.1| hypothetical protein NE1122 [Nitrosomonas europaea ATCC 19718]
gi|30138728|emb|CAD85033.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length = 201
Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 3/172 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+F +TARI I QAPG + E+ L +ND SGDRLREW+ + FY A++PM
Sbjct: 27 PVFQLHETARILIASQAPGRRVHETGLPFNDPSGDRLREWLNMTRTIFYDPRRIAILPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLH---QKSSVKLT 143
+PG GKSGDLPPR A W +L L +I+LT+L+G YAQ YY +K LT
Sbjct: 87 LCFPGTGKSGDLPPRPECAPAWRSALLSHLKNIRLTLLVGQYAQAYYFTRQGRKPVATLT 146
Query: 144 DTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
+ V ++K+ PD PL HPSPRN +W+ R+PWFE +++P L++ + I+ +
Sbjct: 147 ENVRSWQKFWPDIVPLPHPSPRNNLWLRRNPWFEEEIIPALQERVAMILNQT 198
>gi|154251536|ref|YP_001412360.1| Uracil-DNA glycosylase superfamily [Parvibaculum lavamentivorans
DS-1]
gi|154155486|gb|ABS62703.1| Uracil-DNA glycosylase superfamily [Parvibaculum lavamentivorans
DS-1]
Length = 178
Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/169 (44%), Positives = 109/169 (64%), Gaps = 1/169 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TAR+ IVGQAPG + S + D SGDRLR+WMGV + FY A+IPM
Sbjct: 8 PVLRVSSTARLCIVGQAPGTRVHASGTPFTDPSGDRLRDWMGVTPEEFYDISRIAIIPMG 67
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K GDLPPR+ A W + + +L+P ++LT+L+G YAQ ++L + LT T
Sbjct: 68 FCFPGLDAKGGDLPPRRECADHWRRDLFELMPQLELTLLVGQYAQAWHLGKARKESLTAT 127
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
VA +++YLP + PL HPS RN W+ +HPWFE +++P LK +++ + S
Sbjct: 128 VAAWREYLPRHLPLPHPSWRNNAWIKKHPWFETELLPVLKSEVRRCVGS 176
>gi|120610552|ref|YP_970230.1| hypothetical protein Aave_1872 [Acidovorax avenae subsp. citrulli
AAC00-1]
gi|120589016|gb|ABM32456.1| conserved hypothetical protein [Acidovorax avenae subsp. citrulli
AAC00-1]
Length = 199
Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats.
Identities = 75/167 (44%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A ARI + GQAPG K S + ++D SG+RLR WMGVD DTFY G A++PM
Sbjct: 31 PVLQASAGARILVAGQAPGRKVHASGIPFDDASGERLRAWMGVDRDTFYDPGRIAIVPMG 90
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQK-SSVKLTDT 145
F YPG G+SGDLPPR A W +P+L LP I+LTI++G +A ++ + + LTD
Sbjct: 91 FCYPGTGRSGDLPPRPECASTWRKPLLQALPGIRLTIVLGAHALAWHGRRAPAPASLTDA 150
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V +++ P + L HPSPRN W+ RHPWF +++P L++ + +++
Sbjct: 151 VQDWRRDAPALWVLPHPSPRNNGWLKRHPWFAEELLPALRRGVAEVL 197
>gi|83594973|ref|YP_428725.1| Uracil-DNA glycosylase superfamily [Rhodospirillum rubrum ATCC
11170]
gi|83577887|gb|ABC24438.1| Uracil-DNA glycosylase superfamily [Rhodospirillum rubrum ATCC
11170]
Length = 199
Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats.
Identities = 78/167 (46%), Positives = 107/167 (64%), Gaps = 3/167 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+F TAR+ IVGQAPG + + + WND SGDRLR WMGVD +TFY + AV+P
Sbjct: 35 PVFRVSVTARLLIVGQAPGTRVHATGIPWNDASGDRLRAWMGVDRETFYDARRIAVVPTG 94
Query: 87 FYYPGK-GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
YPG+ K GD PPR A W +LP I LT+L+G YAQ +YL ++ S +T+
Sbjct: 95 LCYPGRLAKGGDAPPRPDCAPLWQPAFRAVLPGIALTLLVGGYAQGFYLGRRDS--MTER 152
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V + + P +FPL HPS RN W++RHPWFEA+V+P L++ + ++
Sbjct: 153 VHRFDQGDPAFFPLPHPSWRNTAWINRHPWFEAEVLPALRERVAALL 199
>gi|118737250|ref|ZP_01585654.1| uracil-DNA glycosylase superfamily [Dinoroseobacter shibae DFL 12]
gi|118673107|gb|EAV79675.1| uracil-DNA glycosylase superfamily [Dinoroseobacter shibae DFL 12]
Length = 202
Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats.
Identities = 76/161 (47%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
Query: 34 TARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-K 92
TAR+ I QAPG++A ++ + D SG RLR W+GV+ DTFY FA++PM F +PG
Sbjct: 38 TARVLIASQAPGMRAHKAARPFTDPSGVRLRAWLGVNEDTFYDKNLFAIVPMGFCFPGYD 97
Query: 93 GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKY 152
K DLPP + AQ W PIL LP I LT+LIG YAQK++L ++ +T+TV ++ Y
Sbjct: 98 AKGSDLPPPRICAQTWRAPILAGLPQIALTLLIGGYAQKWHLGPEARAGVTETVRRWRDY 157
Query: 153 LPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
PD FPL HPS RN W++R+PWFEA+ +P L+ + ++++
Sbjct: 158 APDVFPLPHPSWRNTAWLNRNPWFEAECLPALRARLGEVLK 198
>gi|83856071|ref|ZP_00949600.1| hypothetical protein CA2559_03250 [Croceibacter atlanticus
HTCC2559]
gi|83849871|gb|EAP87739.1| hypothetical protein CA2559_03250 [Croceibacter atlanticus
HTCC2559]
Length = 188
Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats.
Identities = 77/166 (46%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A K ++I ++ QAPG K ES + W D+SG +LREW+GV +TFY++ FA++PM
Sbjct: 24 PIIEAAKHSKIVLISQAPGRKVHESGVAWKDQSGKKLREWLGVTEETFYNTDNFAILPMG 83
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGK K+GDLPP K A WH + + L ++L +LIG YAQ YYL LT+ V
Sbjct: 84 FCYPGKAKTGDLPPMKICAPTWHDQVWNELKHVKLKLLIGAYAQNYYLPDDKR-NLTEKV 142
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+Y YLP+YF + HPSP N+ W ++PWFE VV L++ + I+
Sbjct: 143 KNYNDYLPEYFVIPHPSPVNRFWRMKNPWFENTVVTKLQEHVNSIL 188
>gi|71281161|ref|YP_269828.1| phage SPO1 DNA polymerase-related protein [Colwellia
psychrerythraea 34H]
gi|71146901|gb|AAZ27374.1| phage SPO1 DNA polymerase-related protein [Colwellia
psychrerythraea 34H]
Length = 192
Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 121/192 (63%), Gaps = 5/192 (2%)
Query: 2 TSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGD 61
T L E+ + + SQ E + P+ A+I I GQAPG+K S + ++D SG
Sbjct: 6 TLLNEVRRCTICASQ----LEHGVRPVLQVHPKAKILIAGQAPGLKVHTSGVPFDDASGK 61
Query: 62 RLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQL 121
RLREW+G+ + FY A++PM F +PG GK+GDL PRK A W + IL L I++
Sbjct: 62 RLREWLGLSREEFYDPEKVAILPMGFCFPGSGKTGDLAPRKECAPAWREKILAHLKQIEV 121
Query: 122 TILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVV 181
TI++G+YAQKY++ K++ +TD V ++ Y P+ PL HPSPRN IW+ ++PWFE +++
Sbjct: 122 TIVLGSYAQKYHMGLKNA-SVTDLVKSWETYWPNIIPLPHPSPRNNIWLKKNPWFEIELL 180
Query: 182 PDLKKIIQQIIQ 193
P L+ I++ ++
Sbjct: 181 PVLRSRIRESLK 192
>gi|85708087|ref|ZP_01039153.1| uracil-DNA glycosylase [Erythrobacter sp. NAP1]
gi|85689621|gb|EAQ29624.1| uracil-DNA glycosylase [Erythrobacter sp. NAP1]
Length = 194
Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats.
Identities = 77/162 (47%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +RI IVGQAPG + S + W+D SGDRLR W+G+D D FY A++PM
Sbjct: 29 PVVQFSPNSRILIVGQAPGTRVHASGIPWDDDSGDRLRGWLGLDKDAFYDPAKVALMPMG 88
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGK K GD PPRK A WH IL LLP+ +LT+L+G YAQ YL + +TD V
Sbjct: 89 FCYPGKAKGGDAPPRKECAPAWHDRILALLPEDRLTLLVGAYAQAAYLPATRKLSMTDRV 148
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKII 188
+ P +FPL HP+ R ++WM+++PWFEA+ +P L++ I
Sbjct: 149 KRGADFAP-FFPLPHPAWRVRMWMAKNPWFEAETLPALRREI 189
>gi|152983063|ref|YP_001352670.1| uracil-DNA glycosylase [Janthinobacterium sp. Marseille]
gi|151283140|gb|ABR91550.1| uracil-DNA glycosylase [Janthinobacterium sp. Marseille]
Length = 194
Score = 160 bits (404), Expect = 5e-38, Method: Composition-based stats.
Identities = 79/164 (48%), Positives = 106/164 (64%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +TARI I+ QAPG K S + W+D+SG RLREW+G+ FY+ A++PM
Sbjct: 28 PVVQFSRTARILIISQAPGTKVHASGIPWDDQSGARLREWLGISPQDFYNPEKVAIMPMG 87
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGKGKSGDLPPR A WH IL LP LT+L+G+YAQ YL + TD V
Sbjct: 88 FCYPGKGKSGDLPPRPECAPLWHDKILAQLPPDHLTLLVGSYAQARYLPPTAPRLQTDRV 147
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
+ +LP +FPL HPS R WM+R+PWFE++++P L+ +Q+
Sbjct: 148 EAFASFLPAFFPLPHPSWRCVSWMTRNPWFESKLLPILRDTVQK 191
>gi|83945627|ref|ZP_00957973.1| Uracil-DNA glycosylase [Oceanicaulis alexandrii HTCC2633]
gi|83850993|gb|EAP88852.1| Uracil-DNA glycosylase [Oceanicaulis alexandrii HTCC2633]
Length = 198
Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats.
Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
Query: 25 IEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIP 84
+ P+ +ARI I+GQAPG + Q S + D SGDRLR+WMGV D FY A+ P
Sbjct: 26 VRPVVRGEASARIRIIGQAPGTRVQASGKPFTDPSGDRLRDWMGVSEDAFYDERAIAITP 85
Query: 85 MDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLT 143
M F +PG K GD PPR+ A W LP++ LT+L+G +AQ+++L +++ LT
Sbjct: 86 MGFCFPGLDAKGGDKPPRRECAPLWQDRASRALPNVGLTLLVGAHAQRWHLGTQAAKTLT 145
Query: 144 DTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
+TV ++ +LPDY L HPS RN W+ R+PWFE +V+P+LK +++++ S
Sbjct: 146 ETVKQWRLHLPDYVALPHPSWRNTGWLKRNPWFEQEVLPELKARVREMLNS 196
>gi|109900332|ref|YP_663587.1| Uracil-DNA glycosylase superfamily [Pseudoalteromonas atlantica
T6c]
gi|109702613|gb|ABG42533.1| Uracil-DNA glycosylase superfamily [Pseudoalteromonas atlantica
T6c]
Length = 169
Score = 155 bits (393), Expect = 9e-37, Method: Composition-based stats.
Identities = 80/166 (48%), Positives = 109/166 (65%), Gaps = 3/166 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ + ++I IVGQAPGIKA E+ WND SG+RLR+W+ +D FY+ A++PM
Sbjct: 7 PIIQGNQRSKILIVGQAPGIKAHETNKPWNDASGERLRKWLNLDVQHFYNPDNIAILPMA 66
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F YPGK SGD PPRK A WH+ +++ + I+ +LIG YAQ YYL K S LT+ V
Sbjct: 67 FCYPGKASSGDKPPRKECAPLWHERLINSM-QIKHVLLIGQYAQNYYLQDKRS--LTERV 123
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
++ Y P +F L HPSPRN IW+ ++PWFE QVV ++ I +II
Sbjct: 124 KDWQAYQPRFFVLPHPSPRNNIWLKKNPWFEQQVVSAMQHAIAKII 169
>gi|83949985|ref|ZP_00958718.1| uracil-DNA glycosylase, putative [Roseovarius nubinhibens ISM]
gi|83837884|gb|EAP77180.1| uracil-DNA glycosylase, putative [Roseovarius nubinhibens ISM]
Length = 201
Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/159 (46%), Positives = 106/159 (66%), Gaps = 3/159 (1%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KG 93
ARI I GQAPG + +S L ++D+SGDRLR+W+G+D TFY A+IPM F +PG
Sbjct: 37 ARIVIAGQAPGARVHDSGLPFDDRSGDRLRDWLGLDRATFYDRDRIAIIPMAFCFPGYDA 96
Query: 94 KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYL 153
K DLPP A WH + L D+ LT+L+G YAQ+++L +S+V TDTVA ++ +
Sbjct: 97 KGSDLPPPPICAATWHDRVFAHLGDVALTVLVGGYAQRHHLGVRSNV--TDTVAGWRAHA 154
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
P+ FPL HPS RN W+ R+PWFE +++P L+ + Q++
Sbjct: 155 PEVFPLPHPSWRNTAWLKRNPWFETELLPVLRDRVAQVL 193
>gi|88799781|ref|ZP_01115355.1| putative uracil-DNA glycosylase family protein [Reinekea sp.
MED297]
gi|88777515|gb|EAR08716.1| putative uracil-DNA glycosylase family protein [Reinekea sp.
MED297]
Length = 196
Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats.
Identities = 75/160 (46%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A ARI I GQAPG + + + ++D SG RLR W+G+D TFY + A++PM
Sbjct: 29 QPILQADPNARILIAGQAPGKQTLQKGIPFSDASGKRLRRWLGIDEATFYQADNIAILPM 88
Query: 86 DFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F YPGKG SGD PPR A+ W +L LP+I+LT+++G +A KY+ + SV TD
Sbjct: 89 GFCYPGKGDSGDAPPRPECAELWRATLLAALPNIELTLILGAHALKYHAPEYRSV--TDA 146
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLK 185
V + PD L HPSPRNQ W RH WFE V+P LK
Sbjct: 147 VEDWSALWPDRLVLPHPSPRNQAWFKRHSWFERDVLPMLK 186
>gi|15965633|ref|NP_385986.1| hypothetical protein SMc04210 [Sinorhizobium meliloti 1021]
gi|15074814|emb|CAC46459.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 209
Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/171 (42%), Positives = 107/171 (62%), Gaps = 6/171 (3%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +ARI I GQAPG++ ES L +ND SGDRLR+W+ VD FY FA++PM
Sbjct: 37 PVAVLSASARILIAGQAPGLRVHESGLPFNDASGDRLRQWLSVDRAAFYDQRNFAIVPMG 96
Query: 87 FYYPGKGKSG-DLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG + G DLPPR A W Q +D +P I+L + +G+YAQ+++L +T+T
Sbjct: 97 FCFPGYDRHGSDLPPRSECAPLWRQRAMDAMPQIELVLAVGHYAQRWHLGTDCPKSMTET 156
Query: 146 VAHYKKYLP-----DYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQI 191
V ++++Y PL HPS RN W+ RHPWFEA+++P L++ +Q +
Sbjct: 157 VRNWQRYAKRNSGISVLPLPHPSWRNTGWLRRHPWFEAELLPFLRERVQAL 207
>gi|126728254|ref|ZP_01744070.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata
E-37]
gi|126711219|gb|EBA10269.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata
E-37]
Length = 197
Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats.
Identities = 71/169 (42%), Positives = 109/169 (64%), Gaps = 2/169 (1%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A +AR+ I GQAPG+K S + D SGDRLR+W+G+D +TFY A++PM
Sbjct: 31 QPVLRAQPSARLLIAGQAPGMKVHHSGKPFTDPSGDRLRDWLGLDAETFYDETRVAILPM 90
Query: 86 DFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K DLPP A+ W ++D L D++LT+ IG AQ+++L S+V T T
Sbjct: 91 GFCFPGYRKGSDLPPPAICARTWRASLMDRLSDVRLTLPIGGIAQRWHLGVTSNV--TQT 148
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
VA+++ +LPD PL HPS RN W+ R+PWF ++P L+ +++++ +
Sbjct: 149 VANWRDFLPDALPLPHPSWRNTGWLKRNPWFADDLLPVLRARVREVLDA 197
>gi|84501550|ref|ZP_00999722.1| uracil-DNA glycosylase, putative [Oceanicola batsensis HTCC2597]
gi|84390171|gb|EAQ02730.1| uracil-DNA glycosylase, putative [Oceanicola batsensis HTCC2597]
Length = 195
Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
Query: 11 IMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVD 70
I AD T P+ TAR+ I GQAPG++ E ++D+SGDRLR+W+G+D
Sbjct: 13 ICADRFAATATRHRPRPVPWFRPTARLLIAGQAPGLQVHEKGRPFDDRSGDRLRDWLGID 72
Query: 71 YDTFYHSGYFAVIPMDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYA 129
DTFY AV+PM F +PG + DLPP + A+ WH +L LP ++L ILIG +A
Sbjct: 73 RDTFYDLNRVAVVPMAFCFPGYDARGSDLPPPRICAETWHDRVLAALPQLRLRILIGAHA 132
Query: 130 QKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQ 189
Q+++L K V TDTV ++ +LP PL HPS RN W+ R+PWFE +++P L++ ++
Sbjct: 133 QRWHLGAKGRV--TDTVRAFRDHLPGAIPLPHPSWRNTGWLKRNPWFETELLPVLREKVK 190
>gi|58040338|ref|YP_192302.1| Uracil-DNA glycosylase [Gluconobacter oxydans 621H]
gi|58002752|gb|AAW61646.1| Uracil-DNA glycosylase [Gluconobacter oxydans 621H]
Length = 201
Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats.
Identities = 73/167 (43%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
PL A T+RI I QAPG KA + + D SG+RLR+W+G+ D FY + A+ PM
Sbjct: 35 PLIHASATSRILIASQAPGTKAHIAGKSFYDPSGNRLRDWLGISEDIFYDTRQIAIFPMG 94
Query: 87 FYYPGK-GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
YPG+ K GD PPR A W + +L L+PDI+LT+L+G+Y+Q + L + S +T+
Sbjct: 95 LCYPGRLPKGGDNPPRPECAPLWRRRVLSLMPDIRLTLLVGSYSQNHVLGRGS---VTER 151
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V +++ YLPDYFPL HPS R +W + PWF+ +V+P L++ + I+
Sbjct: 152 VRNFRDYLPDYFPLPHPSWRTGVWERKAPWFQEEVIPALRERVHTIL 198
>gi|84683551|ref|ZP_01011454.1| uracil-DNA glycosylase, putative [Rhodobacterales bacterium
HTCC2654]
gi|84668294|gb|EAQ14761.1| uracil-DNA glycosylase, putative [Rhodobacterales bacterium
HTCC2654]
Length = 197
Score = 149 bits (377), Expect = 7e-35, Method: Composition-based stats.
Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 34 TARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-K 92
+AR+ ++GQAPG++ ES + +ND SGDRLR+WMGVD DTFY A+ PM F +PG
Sbjct: 39 SARLRVIGQAPGLRVHESGIPFNDPSGDRLRDWMGVDRDTFYDRARIAITPMAFCFPGYD 98
Query: 93 GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKY 152
+ DLPP + A+ WH + D LT+L+G YAQ+ YL ++S LTDTV ++ +
Sbjct: 99 ARGSDLPPPRVCAETWHDAV-DATLAPTLTLLVGAYAQRRYLGTRAS--LTDTVRGWRDH 155
Query: 153 LPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
LPD PL HPS RN W+ ++PWFEA ++P L+ + + +
Sbjct: 156 LPDILPLPHPSWRNTGWLRKNPWFEADLLPVLRTRVAEAL 195
>gi|153009686|ref|YP_001370901.1| hypothetical protein Oant_2358 [Ochrobactrum anthropi ATCC 49188]
gi|151561574|gb|ABS15072.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 210
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/168 (43%), Positives = 105/168 (62%), Gaps = 8/168 (4%)
Query: 34 TARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKG 93
TARI I GQAPGI+ + L +ND SGDRLR+W+GV + FY FA++PM F +PG
Sbjct: 40 TARIAICGQAPGIRVHNTSLPFNDPSGDRLRQWLGVSREEFYDPSRFAIVPMGFCFPGYD 99
Query: 94 K-SGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKY 152
K GDLPPR+ Q WH + +P ++ +++G YA Y+L LT+TV +++ +
Sbjct: 100 KHGGDLPPRRECRQTWHDRVFAAMPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRYF 159
Query: 153 L--PD-----YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
L P+ PL HPS RN W+ R+PWF+A+VVP L+ ++ +IQ
Sbjct: 160 LETPNPAGRIALPLPHPSWRNSGWLKRNPWFDAEVVPILQAKVRDLIQ 207
>gi|62289815|ref|YP_221608.1| hypothetical protein BruAb1_0881 [Brucella abortus biovar 1 str.
9-941]
gi|62195947|gb|AAX74247.1| conserved hypothetical protein [Brucella abortus biovar 1 str.
9-941]
Length = 223
Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 105/167 (62%), Gaps = 8/167 (4%)
Query: 34 TARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKG 93
TARI I GQAPGI+ + L +ND SGDRLR+W+GV + FY + FA++PM F +PG
Sbjct: 43 TARIAICGQAPGIRVHNTSLPFNDPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYD 102
Query: 94 KS-GDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKY 152
K+ GDLPPR+ Q WH + +P ++ +++G YA Y+L LT+TV +++ +
Sbjct: 103 KNGGDLPPRRECRQTWHDRVFAAMPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHF 162
Query: 153 L--PDY-----FPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+ P + PL HPS RN W+ R+PWF+ +VVP L+ ++ +I
Sbjct: 163 METPSHTGRIALPLPHPSWRNSGWLKRNPWFDMEVVPVLQAKVRHLI 209
>gi|149200955|ref|ZP_01877930.1| uracil-DNA glycosylase, putative [Roseovarius sp. TM1035]
gi|149145288|gb|EDM33314.1| uracil-DNA glycosylase, putative [Roseovarius sp. TM1035]
Length = 195
Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/184 (40%), Positives = 109/184 (59%), Gaps = 3/184 (1%)
Query: 11 IMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVD 70
+ AD T P+ TAR+ I GQAPG++ +S ++D SGDRLR+W+G++
Sbjct: 13 LCADRFAATHTAHAPRPVVWFQPTARLLIAGQAPGLRVHQSGKPFDDPSGDRLRDWLGLN 72
Query: 71 YDTFYHSGYFAVIPMDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYA 129
FY A++PM F +PG K DLPP + + WH ++ +++LT+L+G YA
Sbjct: 73 ACEFYDKSRVAIVPMAFCFPGYDAKGSDLPPPRICGRTWHVRVMQAFENVRLTVLVGGYA 132
Query: 130 QKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQ 189
KY+L K+ V T TV ++ Y P F L HPS RN W+ +HPWFEA V+P+L+ IQ
Sbjct: 133 HKYHLGVKTGV--TQTVQAWRDYAPRIFTLPHPSWRNTAWLKKHPWFEADVLPELRAQIQ 190
Query: 190 QIIQ 193
++I
Sbjct: 191 RVIH 194
>gi|17987380|ref|NP_540014.1| Uracil-DNA glycosylase [Brucella melitensis 16M]
gi|23501755|ref|NP_697882.1| hypothetical protein BR0869 [Brucella suis 1330]
gi|17983067|gb|AAL52278.1| hypothetical protein [Brucella melitensis 16M]
gi|23347683|gb|AAN29797.1| conserved hypothetical protein [Brucella suis 1330]
Length = 213
Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 105/167 (62%), Gaps = 8/167 (4%)
Query: 34 TARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKG 93
TARI I GQAPGI+ + L +ND SGDRLR+W+GV + FY + FA++PM F +PG
Sbjct: 43 TARIAICGQAPGIRVHNTSLPFNDPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYD 102
Query: 94 KS-GDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKY 152
K+ GDLPPR+ Q WH + +P ++ +++G YA Y+L LT+TV +++ +
Sbjct: 103 KNGGDLPPRRECRQTWHDRVFAAMPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHF 162
Query: 153 L--PDY-----FPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+ P + PL HPS RN W+ R+PWF+ +VVP L+ ++ +I
Sbjct: 163 METPSHTGRIALPLPHPSWRNSGWLKRNPWFDMEVVPVLQAKVRHLI 209
>gi|114569513|ref|YP_756193.1| uracil-DNA glycosylase [Maricaulis maris MCS10]
gi|114339975|gb|ABI65255.1| uracil-DNA glycosylase [Maricaulis maris MCS10]
Length = 196
Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats.
Identities = 67/160 (41%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A + ARI +VGQAPG + S + D SGDRLR+W+ +D +FY A++PM
Sbjct: 29 PVIQAHRDARILLVGQAPGTRVHASGKPFTDPSGDRLRDWLQIDEASFYDPTKLAIVPMG 88
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K GDLPPR+ A W + + LP+++LT+L+G YA +++L ++ LT+T
Sbjct: 89 FCFPGLDAKGGDLPPRRECAPLWQARVRENLPNVRLTLLVGQYATRFWLGSRAHKTLTET 148
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLK 185
V ++Y PD+ PL HPS RN W+ ++PWF ++P L+
Sbjct: 149 VRQAERYAPDFLPLPHPSWRNSAWLRKNPWFGEIILPMLR 188
>gi|150396807|ref|YP_001327274.1| Uracil-DNA glycosylase superfamily [Sinorhizobium medicae WSM419]
gi|150028322|gb|ABR60439.1| Uracil-DNA glycosylase superfamily [Sinorhizobium medicae WSM419]
Length = 217
Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats.
Identities = 70/171 (40%), Positives = 106/171 (61%), Gaps = 6/171 (3%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +ARI I GQAPG++ ES L +ND SGDRLR+W+ VD FY G FA++PM
Sbjct: 45 PVAVLSSSARILIAGQAPGLRVHESGLPFNDASGDRLRQWLSVDRTAFYDPGNFAIVPMG 104
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG G DLPPR A W + +D +P I+L + +G+YAQ+++L Q +T+T
Sbjct: 105 FCFPGYDGHGSDLPPRSECASLWRRRAIDAMPQIELVLAVGHYAQRWHLGQGCPKSMTET 164
Query: 146 VAHYKKYLPD-----YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQI 191
V ++++Y PL HPS RN W+ R+ WFE +++P L++ ++ +
Sbjct: 165 VRNWRRYAKSNSGTPVLPLPHPSWRNTGWLRRNLWFETELLPFLREQVKAL 215
>gi|89056143|ref|YP_511594.1| Uracil-DNA glycosylase superfamily [Jannaschia sp. CCS1]
gi|88865692|gb|ABD56569.1| Uracil-DNA glycosylase superfamily [Jannaschia sp. CCS1]
Length = 194
Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats.
Identities = 77/176 (43%), Positives = 106/176 (60%), Gaps = 3/176 (1%)
Query: 11 IMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVD 70
I AD + + P+ ARI + GQAPG++ S + D SGDRLR+WMGVD
Sbjct: 12 ICADRFAQTYPGHAPRPVVWFRPGARILVAGQAPGMRVHRSGQPFTDPSGDRLRDWMGVD 71
Query: 71 YDTFYHSGYFAVIPMDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYA 129
TFY A++PM F +PG K DLPP K A+ W P+LD L ++LT+L+G YA
Sbjct: 72 EKTFYDKDRVAILPMAFCFPGYDAKGADLPPPKICARTWRGPLLDALGRVRLTLLVGGYA 131
Query: 130 QKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLK 185
Q ++L K++V T V ++ + P FPL HPS RN W+ RHPWFEA+++P L+
Sbjct: 132 QGWHLGDKTTV--TARVEAWRDHAPAVFPLPHPSWRNTGWLKRHPWFEAELLPVLR 185
>gi|85711552|ref|ZP_01042610.1| Uracil-DNA glycosylase [Idiomarina baltica OS145]
gi|85694704|gb|EAQ32644.1| Uracil-DNA glycosylase [Idiomarina baltica OS145]
Length = 201
Score = 146 bits (368), Expect = 7e-34, Method: Composition-based stats.
Identities = 75/169 (44%), Positives = 107/169 (63%), Gaps = 5/169 (2%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ARI I GQAPGI+ S ++D SG+RLR W+GVD FY + FA++PM
Sbjct: 27 PVIQFHPHARILIAGQAPGIRVHRSGKPFDDPSGERLRAWLGVDKSDFYDARQFAILPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVK----L 142
F YPG SGD PPR A W + +L+ LP +QLT+ IG YAQ+++ Q + +K L
Sbjct: 87 FCYPGTTSSGDAPPRPECADAWREQLLEQLPHLQLTLAIGQYAQQWHAQQLTGIKLQRTL 146
Query: 143 TDTVAHYKKYLPD-YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQ 190
T+ V +++ +L PL HPSPRN W++++PWFE +V+P+LK I +
Sbjct: 147 TERVKNWQAWLEQGILPLPHPSPRNNRWLAKNPWFEDEVLPELKAQIAR 195
>gi|113932627|ref|ZP_01418529.1| Uracil-DNA glycosylase superfamily [Caulobacter sp. K31]
gi|113732848|gb|EAU13916.1| Uracil-DNA glycosylase superfamily [Caulobacter sp. K31]
Length = 195
Score = 146 bits (368), Expect = 7e-34, Method: Composition-based stats.
Identities = 73/170 (42%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ + RI I GQAPG E+ L +ND SG+RLR+WMG+D +TFY V M
Sbjct: 26 PVVRVGEGTRILICGQAPGRLVHETGLPFNDPSGNRLRDWMGIDRETFYGRLEIGVAAMA 85
Query: 87 FYYPGKG-KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K GD PP A W QP+L LP ++LT+L+G++AQ + L+ + +TDT
Sbjct: 86 FCFPGTNPKGGDYPPPARCALLWRQPLLAALPKVELTLLVGSHAQAWALNSRMKANMTDT 145
Query: 146 VAHYKKYLPD-YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
VA ++ ++ + PL HPS RN W+ R+PWFEA+V P L++ + I+ S
Sbjct: 146 VAAWRDFIDEGVLPLPHPSWRNTGWLKRNPWFEAEVAPYLRRRVAGILAS 195
>gi|148559096|ref|YP_001258844.1| hypothetical protein BOV_0861 [Brucella ovis ATCC 25840]
gi|148370353|gb|ABQ60332.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 213
Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 104/167 (62%), Gaps = 8/167 (4%)
Query: 34 TARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKG 93
TARI I GQAPGI+ + L +ND SGDRLR+W+GV + FY + FA++PM F +PG
Sbjct: 43 TARIAICGQAPGIRVHNTSLPFNDPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYD 102
Query: 94 KS-GDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKY 152
K+ GDLPPR+ Q WH + +P ++ +++G YA Y+L L +TV +++ +
Sbjct: 103 KNGGDLPPRRECRQTWHDRVFAAMPQLEFILVVGQYALAYHLPDYRGRNLMETVKNWRHF 162
Query: 153 L--PDY-----FPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+ P + PL HPS RN W+ R+PWF+ +VVP L+ ++ +I
Sbjct: 163 METPSHTGRIALPLPHPSWRNSGWLKRNPWFDMEVVPVLQAKVRHLI 209
>gi|85704398|ref|ZP_01035500.1| uracil-DNA glycosylase, putative [Roseovarius sp. 217]
gi|85670806|gb|EAQ25665.1| uracil-DNA glycosylase, putative [Roseovarius sp. 217]
Length = 195
Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%)
Query: 1 MTSLEEITKA--IMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDK 58
MT L +A + AD T + P+ +AR+ I GQAPG++ +S ++D
Sbjct: 1 MTDLPSEIRACRLCADRFAASETAHSPRPVVWFQPSARLLIAGQAPGLRVHQSGKPFDDP 60
Query: 59 SGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLP 117
SGDRLR W+G+ FY A++PM F +PG K DLPP + + WH ++ L
Sbjct: 61 SGDRLRNWLGLSPCEFYDKSRVAIVPMAFCFPGYDAKGSDLPPPRICGKTWHARVMQALD 120
Query: 118 DIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFE 177
+++LT+L+G YA KY+L K+ V T TV ++ + P F L HPS RN W+ +HPWFE
Sbjct: 121 NVKLTVLVGGYAHKYHLGVKTGV--TQTVEAWRDHAPRIFTLPHPSWRNTAWLRKHPWFE 178
Query: 178 AQVVPDLKKIIQQIIQ 193
A+V+P+L+ IQ++I
Sbjct: 179 AEVLPELRAQIQRVIH 194
>gi|116252523|ref|YP_768361.1| hypothetical protein RL2777 [Rhizobium leguminosarum bv. viciae
3841]
gi|115257171|emb|CAK08266.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 210
Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats.
Identities = 70/165 (42%), Positives = 102/165 (61%), Gaps = 6/165 (3%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +ARI I GQAPG++ ES L ++D SGDRLR W+GVD +FY FA++PM
Sbjct: 38 PVAVISSSARILIAGQAPGLRVHESGLPFDDASGDRLRSWLGVDRASFYDRDRFAIVPMG 97
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K DLPPR+ A W Q ++ +P I+L ++IG YAQ +++ + +T+T
Sbjct: 98 FCFPGYDDKGADLPPRRECAPFWRQRVISAMPQIELVLVIGQYAQAWHMAGERRDNMTET 157
Query: 146 VAHYKKYL-----PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLK 185
V ++ L P PL HPS RN W+ R+PWFE +++P L+
Sbjct: 158 VRAWRDCLLSDRSPVVLPLPHPSWRNSGWLKRNPWFEKELLPVLQ 202
>gi|16126323|ref|NP_420887.1| hypothetical protein CC_2084 [Caulobacter crescentus CB15]
gi|13423565|gb|AAK24055.1| conserved hypothetical protein [Caulobacter crescentus CB15]
Length = 194
Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/169 (40%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ R+ I GQAPG E+ L +ND SG RLR+WMG+D +TFY V M
Sbjct: 26 PVTRVSTATRLLIAGQAPGRIVHETGLPFNDPSGVRLRQWMGIDRETFYGRSEIGVAAMA 85
Query: 87 FYYPGKG-KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K GD PP A W +L LP+++LT+L+G YAQ++ L ++ +T+T
Sbjct: 86 FCFPGTNPKGGDYPPPPRCAALWRSQLLAALPNVELTLLVGRYAQEWALDGRTGKTMTET 145
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
+ ++++ P+ PL HPS RN W+ R+PWFEA+V P L++ + I++S
Sbjct: 146 IERWREFGPNVLPLPHPSWRNTAWLKRNPWFEAEVTPYLRRRVADILRS 194
>gi|17935776|ref|NP_532566.1| hypothetical protein Atu1886 [Agrobacterium tumefaciens str. C58]
gi|17740335|gb|AAL42882.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 208
Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats.
Identities = 66/172 (38%), Positives = 107/172 (62%), Gaps = 6/172 (3%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ARI I GQAPG++ E+ + +ND SG+RLR+W+ VD +TFY FA++PM
Sbjct: 37 PVVVISTKARILIAGQAPGLRVHETGIPFNDASGERLRQWLDVDRETFYDPERFAIVPMG 96
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K DLPPR+ A W + ++ +P ++L + +G YAQ ++L ++ +T+T
Sbjct: 97 FCFPGYDDKGSDLPPRRECAPLWRERVMAAMPQVELILAVGQYAQAFHLGERRHKTMTET 156
Query: 146 VAHYKKYL-----PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V +++ YL P PL HPS RN W+ ++PWF +++P L++ ++ I
Sbjct: 157 VENWRSYLHANSGPGILPLPHPSWRNTGWLKKNPWFTEELLPVLRQHVEMRI 208
>gi|15889185|ref|NP_354866.1| hypothetical protein AGR_C_3461 [Agrobacterium tumefaciens str.
C58]
gi|15157004|gb|AAK87651.1| AGR_C_3461p [Agrobacterium tumefaciens str. C58]
Length = 217
Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats.
Identities = 66/172 (38%), Positives = 107/172 (62%), Gaps = 6/172 (3%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ARI I GQAPG++ E+ + +ND SG+RLR+W+ VD +TFY FA++PM
Sbjct: 46 PVVVISTKARILIAGQAPGLRVHETGIPFNDASGERLRQWLDVDRETFYDPERFAIVPMG 105
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K DLPPR+ A W + ++ +P ++L + +G YAQ ++L ++ +T+T
Sbjct: 106 FCFPGYDDKGSDLPPRRECAPLWRERVMAAMPQVELILAVGQYAQAFHLGERRHKTMTET 165
Query: 146 VAHYKKYL-----PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V +++ YL P PL HPS RN W+ ++PWF +++P L++ ++ I
Sbjct: 166 VENWRSYLHANSGPGILPLPHPSWRNTGWLKKNPWFTEELLPVLRQHVEMRI 217
>gi|86358051|ref|YP_469943.1| probable uracil-DNA glycosylase protein [Rhizobium etli CFN 42]
gi|86282153|gb|ABC91216.1| probable uracil-DNA glycosylase protein [Rhizobium etli CFN 42]
Length = 210
Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 105/172 (61%), Gaps = 6/172 (3%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ARI I GQAPG++ ES L ++D SGDRLR W+GVD +FY FA++PM
Sbjct: 38 PVAVISARARILIAGQAPGLRVHESGLPFDDASGDRLRSWLGVDRASFYDRSRFAIVPMG 97
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K DLPPR+ A W Q ++ +P I+L ++IG YAQ +++ + +T+T
Sbjct: 98 FCFPGYDDKGADLPPRRECAPFWRQRVIAAMPQIELVLVIGQYAQAWHMADEKRGNMTET 157
Query: 146 VAHYKKYL-----PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V ++ L P PL HPS RN W+ R+ WFE +++P L++ ++ ++
Sbjct: 158 VRAWRASLLSGRSPAVLPLPHPSWRNSGWLKRNSWFEEELLPVLQERVKMLL 209
>gi|121595680|ref|YP_987576.1| Uracil-DNA glycosylase superfamily [Acidovorax sp. JS42]
gi|120607760|gb|ABM43500.1| Uracil-DNA glycosylase superfamily [Acidovorax sp. JS42]
Length = 221
Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 109/191 (57%), Gaps = 3/191 (1%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
L+E+ + + A + + P+ A AR+ IVGQAPG K S + ++D SG+RL
Sbjct: 30 LDELLRRVRACTICAPYLPLGPRPVLQADARARLLIVGQAPGRKVHASGIPFDDASGERL 89
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTI 123
R W+G+ +TFY A++PM F YPG+G SGD PPR A W P+L LP+I LT+
Sbjct: 90 RTWLGLTRETFYDPARVAIVPMGFCYPGRGASGDAPPRPECAPAWRVPLLARLPNIALTV 149
Query: 124 LIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPD--YFPLVHPSPRNQIWMSRHPWFEAQVV 181
+G YA ++L L +TV L D L HPSPRN W+ RHPWFE++++
Sbjct: 150 AVGQYALAWHLAACRGQPLGETV-RGTCTLSDAPVLALPHPSPRNNGWLKRHPWFESELL 208
Query: 182 PDLKKIIQQII 192
P ++ + ++
Sbjct: 209 PLVRARVATVL 219
>gi|126724784|ref|ZP_01740627.1| Uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2150]
gi|126705948|gb|EBA05038.1| Uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2150]
Length = 191
Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats.
Identities = 70/170 (41%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+F A+I I GQAPG + ++D SGDRLR+W+GVD DTFY+ A++PM
Sbjct: 22 KPIFKINSKAKILIAGQAPGRITHAKGVPFDDPSGDRLRDWLGVDRDTFYNDPAIAILPM 81
Query: 86 DFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
+PG GK GDLPPR A W L +P ++LT++IG YA ++L + + + +T
Sbjct: 82 GLCFPGTGKGGDLPPRPECAIAWRGRALAKMPRLELTLIIGRYAIDWHLPEMAKLTVTKA 141
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
V K + L HPSPRN W+ ++PWFE V+PDL+ I+++ S
Sbjct: 142 VEMGKN--DNQMILPHPSPRNNRWLKQNPWFEVDVLPDLRARIERLRNQS 189
>gi|149204661|ref|ZP_01881626.1| hypothetical protein RTM1035_09753 [Roseovarius sp. TM1035]
gi|149141920|gb|EDM29970.1| hypothetical protein RTM1035_09753 [Roseovarius sp. TM1035]
Length = 211
Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats.
Identities = 70/166 (42%), Positives = 99/166 (59%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
PLF RI IVGQAPG +A + ++D SG RLR W+G+D TF A++PM
Sbjct: 35 PLFQIGAGVRILIVGQAPGRRAHLAGRLFDDASGVRLRNWLGLDEATFRDPEKIAILPMG 94
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG G+SGDLPPR A W ++ LLPDI LT++IG +AQ ++L + S + L + +
Sbjct: 95 FCFPGTGRSGDLPPRPECAPLWRARVMALLPDIMLTVVIGRHAQSWHLPEISRLPLAEAM 154
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+ P L HPSPRN W R+ WFE ++P L+ + ++I
Sbjct: 155 RDWPTCWPASILLPHPSPRNMGWFQRNVWFETDLLPVLRARVIKLI 200
>gi|118756086|ref|ZP_01603869.1| phage SPO1 DNA polymerase domain protein [Shewanella pealeana ATCC
700345]
gi|118692429|gb|EAV98662.1| phage SPO1 DNA polymerase domain protein [Shewanella pealeana ATCC
700345]
Length = 200
Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A+I I GQAPG K ++D SG+RLR W+GV + FY FA++PM
Sbjct: 29 KPIVQLGAGAKILIAGQAPGQKTHHKGRPFDDASGERLRAWLGVSREQFYDPELFAILPM 88
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV 140
F YPG +SGD PPR A++W + +L LP+++LT+L+G YA +++L QK SV
Sbjct: 89 GFCYPGSYSASDKQSGDKPPRPECAKQWRKQVLKQLPNVELTLLVGKYAIEWHLKQKISV 148
Query: 141 KLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
TD+VA+++ P + HPSPRN IW+ R+P FE +++P L++ I ++ Q
Sbjct: 149 --TDSVANWQAMWPQTLVMPHPSPRNNIWLKRNPEFEQKIIPQLQQRITKLTQ 199
>gi|94501847|ref|ZP_01308358.1| putative uracil-DNA glycosylase family protein [Oceanobacter sp.
RED65]
gi|94425980|gb|EAT10977.1| putative uracil-DNA glycosylase family protein [Oceanobacter sp.
RED65]
Length = 211
Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 114/201 (56%), Gaps = 24/201 (11%)
Query: 10 AIMADSQNKVFTEKNI----EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLRE 65
++ A+ Q+ + + N+ P+ + + I I+GQAPG KA + + D SG RLRE
Sbjct: 2 SLHAEIQHCLICQSNLPLPPRPVLQFSQNSNILIIGQAPGQKAHHAHQPFKDASGKRLRE 61
Query: 66 WMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILI 125
W+G+ FY + A++PM F YPGKGKSGDLPP Q WH+ +LD + IQL +L+
Sbjct: 62 WLGLTESEFYDADKVALMPMAFCYPGKGKSGDLPPPPICHQTWHKRLLDHMQKIQLVVLL 121
Query: 126 GNYAQKYYLHQ-------------------KSSVKLTDTVAHYKKYLPD-YFPLVHPSPR 165
G Y+Q++YL Q K L D VA+ LP+ L HPSPR
Sbjct: 122 GQYSQRHYLTQATDFPWLKPSESERCQKLYKQYNNLADRVANQSTSLPESIMALPHPSPR 181
Query: 166 NQIWMSRHPWFEAQVVPDLKK 186
NQ+W+ ++PWFE QV+P L++
Sbjct: 182 NQLWLKKNPWFEQQVIPILQQ 202
>gi|119774340|ref|YP_927080.1| hypothetical protein Sama_1203 [Shewanella amazonensis SB2B]
gi|119766840|gb|ABL99410.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 197
Score = 139 bits (351), Expect = 7e-32, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A A+I I GQAPG E ++D SGDRLR W+GVD FY G FA++PM
Sbjct: 25 KPILQAESDAKILIAGQAPGANTHEKGRPFDDASGDRLRHWLGVDKACFYDPGRFAILPM 84
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYL--HQKS 138
F +PG + GD PPR A W + +L LP+++LT+L+G YA ++L H+
Sbjct: 85 GFCFPGAIIRHGRRQGDKPPRPECAPAWRKQLLSHLPNVELTLLLGTYALDWHLPEHRGL 144
Query: 139 SVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
+++ TD H+ K L L HPSPRN +W+ RHP FEA V+P L++ + ++
Sbjct: 145 TLEATDWQTHWPKLL----VLPHPSPRNGLWLKRHPEFEANVIPKLQQRVSGLL 194
>gi|118073323|ref|ZP_01541505.1| Uracil-DNA glycosylase superfamily [Shewanella woodyi ATCC 51908]
gi|118022186|gb|EAV36008.1| Uracil-DNA glycosylase superfamily [Shewanella woodyi ATCC 51908]
Length = 199
Score = 139 bits (351), Expect = 7e-32, Method: Composition-based stats.
Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 8/178 (4%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ ++I IVGQAPGI+A + ++D SG+RLR W+GV + FY FA++PM
Sbjct: 19 KPIIQLSSESKILIVGQAPGIRAHDHGRAFSDPSGERLRSWLGVSDEQFYDPSLFAILPM 78
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV 140
F +PG KSGD PP K A+ W + +L LP ++LTI++G YA Y+L + +
Sbjct: 79 GFCFPGTIITNGKKSGDKPPLKRCAETWREALLSQLPQVELTIILGQYAIDYHLGKSAEG 138
Query: 141 K---LTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
K +T ++ ++ Y P+Y L HPSPRN +++ +HP EA ++P LK + ++I ++
Sbjct: 139 KKLTVTQAISQWQDYWPEYMVLPHPSPRNNLFLKKHPECEANLLPALKARVTKLIAAN 196
>gi|84703634|ref|ZP_01017462.1| hypothetical protein PB2503_08019 [Parvularcula bermudensis
HTCC2503]
gi|84690068|gb|EAQ15909.1| hypothetical protein PB2503_08019 [Parvularcula bermudensis
HTCC2503]
Length = 184
Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 105/176 (59%), Gaps = 14/176 (7%)
Query: 34 TARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-- 91
TARI + QAPG A + + D SGDRLR WMG+ D FY SG A++PM F +PG
Sbjct: 2 TARIGVFSQAPGNLAHQGGKPFLDPSGDRLRRWMGLTEDQFYGSGLIAIVPMAFCFPGYD 61
Query: 92 ----KGKSGDLPPRKGFAQKWHQPILDLLPD-IQLTILIGNYAQKYYLHQKSSVKLTDTV 146
G+ GD PP + A+KW I+ ++ D +++ +LIG YAQ+++L + ++ +L+D V
Sbjct: 62 GTGPTGRGGDRPPPRICAEKWRNEIMAMIDDRLEIVLLIGRYAQEWHLGKSAARRLSDAV 121
Query: 147 AHYKKYLPD-------YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
+ + D P+ HPS RN W+ RHPWFEA+V+P L++ I + ++
Sbjct: 122 GQWPSHFADADRGGELILPMPHPSWRNTAWLKRHPWFEAEVIPRLQRRIADVFAAA 177
>gi|149114372|ref|ZP_01841125.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS223]
gi|146865771|gb|EDK51052.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS223]
Length = 259
Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 38/205 (18%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A ARI I GQAPG+K + ++D SG+RLR W+ V + FY FA+IPM
Sbjct: 50 KPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRTWLNVTREQFYDPALFAIIPM 109
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV 140
F +PG K GD PPR A WHQ +L L+P I+L +++G YA Y+L ++SSV
Sbjct: 110 GFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQIELIVILGQYAIDYHLPRESSV 169
Query: 141 KL---------------------------------TDTVAHYKKYLPDYFPLVHPSPRNQ 167
+ T A +++Y P YF L HPSPRN
Sbjct: 170 AINLTSPLTEPQTTHINVSSSAKAKTIPKLKPITVTQACAQWQQYWPKYFVLPHPSPRNN 229
Query: 168 IWMSRHPWFEAQVVPDLKKIIQQII 192
+W+ +HP FE ++P L+ I ++
Sbjct: 230 LWLKQHPEFERDMLPRLRMRIASLL 254
>gi|149913660|ref|ZP_01902193.1| uracil-DNA glycosylase, putative [Roseobacter sp. AzwK-3b]
gi|149812780|gb|EDM72609.1| uracil-DNA glycosylase, putative [Roseobacter sp. AzwK-3b]
Length = 195
Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 102/159 (64%), Gaps = 3/159 (1%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KG 93
AR+ I GQAPG + S + ++D SGDRLR+W+G++ FY A++PM F +PG
Sbjct: 37 ARLLIAGQAPGARVHASGVPFDDPSGDRLRDWLGLERAEFYDKERVAIVPMAFCFPGYDA 96
Query: 94 KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYL 153
K DL P + WH ++ L ++L++++G YAQ+Y++ K V T+TVA ++ +
Sbjct: 97 KGADLAPPAICGRTWHAQVMARLARVRLSVIVGGYAQRYHMGAKGRV--TETVAAWRDHA 154
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
P FPL HPS RN W+ R+PWFEA+++P L+ +++++
Sbjct: 155 PRVFPLPHPSWRNTAWLKRNPWFEAELLPVLRAQVREVL 193
>gi|153000103|ref|YP_001365784.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS185]
gi|151364721|gb|ABS07721.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS185]
Length = 232
Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 38/205 (18%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A ARI I GQAPG+K + ++D SG+RLR W+ V + FY FA+IPM
Sbjct: 23 KPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRTWLNVTREQFYDPALFAIIPM 82
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV 140
F +PG K GD PPR A WHQ +L L+P I+L +++G YA Y+L ++SSV
Sbjct: 83 GFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQIELIVILGQYAIDYHLPRESSV 142
Query: 141 KL---------------------------------TDTVAHYKKYLPDYFPLVHPSPRNQ 167
+ T A +++Y P YF L HPSPRN
Sbjct: 143 AINLTSPLSKVQTTSTNVSSSTKAKTIPKLKAITVTQACAQWQQYWPKYFVLPHPSPRNN 202
Query: 168 IWMSRHPWFEAQVVPDLKKIIQQII 192
+W+ +HP FE ++P L+ I ++
Sbjct: 203 LWLKQHPEFERDMLPRLRMRIASLL 227
>gi|89068529|ref|ZP_01155926.1| uracil-DNA glycosylase, putative [Oceanicola granulosus HTCC2516]
gi|89045948|gb|EAR52008.1| uracil-DNA glycosylase, putative [Oceanicola granulosus HTCC2516]
Length = 194
Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats.
Identities = 68/160 (42%), Positives = 100/160 (62%), Gaps = 3/160 (1%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KG 93
ARI I GQAPG + E++ + D SG RLR+W+G+ D FY AV+PM F +PG
Sbjct: 37 ARILIAGQAPGARVHEAQRPFADASGVRLRDWLGLGEDEFYDRNRIAVVPMAFCFPGYDA 96
Query: 94 KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYL 153
K DLPP A WH ++ LPD+ L IL+G +A +++L + S LT+ VA ++ +
Sbjct: 97 KGSDLPPPPICAATWHDRVMAALPDLGLRILVGGHAHRWHLGGRLS--LTERVADWRAHA 154
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
P FPL HPS RN W+ R+PWF +++P LK +++++Q
Sbjct: 155 PHTFPLPHPSWRNTGWLKRNPWFAEELLPVLKARVREVLQ 194
>gi|126733709|ref|ZP_01749456.1| Uracil-DNA glycosylase superfamily protein [Roseobacter sp. CCS2]
gi|126716575|gb|EBA13439.1| Uracil-DNA glycosylase superfamily protein [Roseobacter sp. CCS2]
Length = 193
Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 111/195 (56%), Gaps = 4/195 (2%)
Query: 1 MTSLEEITKAIMA-DSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKS 59
MT EEI+ + D T P+ RI I QAPG++ + + D+S
Sbjct: 1 MTLQEEISACTLCRDRFAATATRHQPRPIVWFETPPRILIASQAPGMRVHAAGTPFWDRS 60
Query: 60 GDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPD 118
GDRLR+W+GV+ DTFY A++PM F +PG K DLPP WH ++ L
Sbjct: 61 GDRLRDWLGVNPDTFYDRSKIAIVPMAFCFPGYDAKGSDLPPPPICRATWHDRVMAALGQ 120
Query: 119 IQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEA 178
+QL +L+G YA +++L+ +S V T+TV ++ P FPL HPS RN W+ ++PWFEA
Sbjct: 121 VQLKLLVGGYAHRWHLNSRSGV--TETVRGWRDLGPRVFPLPHPSWRNTAWLKKNPWFEA 178
Query: 179 QVVPDLKKIIQQIIQ 193
++P+L+ ++ +++
Sbjct: 179 DLLPELRAAVKDVLK 193
>gi|113951110|ref|ZP_01436704.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS195]
gi|113906467|gb|EAU25225.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS195]
Length = 232
Score = 136 bits (342), Expect = 8e-31, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 106/205 (51%), Gaps = 38/205 (18%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A ARI I GQAPG+K + ++D SG+RLR W+ V + FY FA++PM
Sbjct: 23 KPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRTWLNVTREQFYDPALFAIVPM 82
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV 140
F +PG K GD PPR A WHQ +L L+P I+L +++G YA Y+L ++SSV
Sbjct: 83 GFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQIELIVILGQYAIDYHLPRESSV 142
Query: 141 KL---------------------------------TDTVAHYKKYLPDYFPLVHPSPRNQ 167
+ T A +++Y P YF L HPSPRN
Sbjct: 143 AINLTSPLTKPQTTHINVSSSAKAKTIPKLKPITVTQACAQWQQYWPKYFVLPHPSPRNN 202
Query: 168 IWMSRHPWFEAQVVPDLKKIIQQII 192
+W+ +HP FE ++P L+ I ++
Sbjct: 203 LWLKQHPEFERDMLPRLRMRIASLL 227
>gi|134278457|ref|ZP_01765171.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
305]
gi|134250241|gb|EBA50321.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
305]
Length = 141
Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/132 (46%), Positives = 88/132 (66%)
Query: 63 LREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLT 122
+R W+ VD TFY FA++PM F YPG+G SGD PPR A W +L LPDI+LT
Sbjct: 1 MRAWLNVDDATFYDESLFAIVPMGFCYPGRGASGDNPPRPECAPLWLDKLLAELPDIRLT 60
Query: 123 ILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVP 182
+LIG YAQ+ +L + LT+TV + +Y P++ PL HPSPRNQ W+ +HPWF+A V+P
Sbjct: 61 LLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEFIPLPHPSPRNQGWLKQHPWFDADVLP 120
Query: 183 DLKKIIQQIIQS 194
L+ + +++ +
Sbjct: 121 ALRDRVAELLPT 132
>gi|152995458|ref|YP_001340293.1| uracil-DNA glycosylase superfamily [Marinomonas sp. MWYL1]
gi|150836382|gb|ABR70358.1| uracil-DNA glycosylase superfamily [Marinomonas sp. MWYL1]
Length = 208
Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 13/179 (7%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A++ I GQAPG K + ++D SGDRLREW+G+ D FY A++PM
Sbjct: 28 KPILQIHPNAKLLIAGQAPGQKTHDIGRPFDDLSGDRLREWLGLSADEFYDEQQVAIVPM 87
Query: 86 DFYYPGKG----------KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLH 135
F +PG KSGDLPPR + KW + +L+ L +I+LTI++G YAQ Y+L
Sbjct: 88 GFCFPGNSIHKSGPSTGKKSGDLPPRPECSIKWREAVLNQLTNIELTIVLGAYAQAYHLG 147
Query: 136 QKSSVKLTDTVAHYKKYLPD-YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
Q +V T+ V ++ +L L HPSPRN W+ ++PWFE+ V+P+L+ I+ ++Q
Sbjct: 148 QSGNV--TEQVKQWRYWLEQGKLVLPHPSPRNNRWLKQNPWFESDVLPELRLRIKGLLQ 204
>gi|13470766|ref|NP_102335.1| hypothetical protein mll0558 [Mesorhizobium loti MAFF303099]
gi|14021509|dbj|BAB48121.1| mll0558 [Mesorhizobium loti MAFF303099]
Length = 224
Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 6/169 (3%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +ARI I QAPG K S + + D SGDRLR W+GV D FY FA++PM
Sbjct: 52 PVLRPSSSARILIASQAPGTKVHLSGMPFTDASGDRLRSWLGVTSDEFYDIEKFAIVPMG 111
Query: 87 FYYPGK-GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG+ K GDLPPR+ A W P++ L+P I L + IG YAQ +++ LT+T
Sbjct: 112 FCFPGQDAKGGDLPPRRECAPAWRAPLMALMPRIDLVLTIGIYAQSWHMAAARRPSLTET 171
Query: 146 VAHYKKYLPD-----YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQ 189
V ++ + PL HPS RN W+ ++PWFE ++P L+ I+
Sbjct: 172 VMDWRAIWENSVGAKVLPLPHPSWRNSGWLKQNPWFEMDLLPFLRSEIR 220
>gi|99080497|ref|YP_612651.1| Uracil-DNA glycosylase superfamily [Silicibacter sp. TM1040]
gi|99036777|gb|ABF63389.1| Uracil-DNA glycosylase superfamily [Silicibacter sp. TM1040]
Length = 200
Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/168 (38%), Positives = 102/168 (60%), Gaps = 3/168 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ +ARI I GQAPG++ +S + D SGDRLREW+G+ D FY + A++PM
Sbjct: 33 PVVWFEPSARILIAGQAPGMRVHQSGRPFTDSSGDRLREWLGLSEDCFYDTSRVAIVPMA 92
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K+ DLPP + + WH ++ L ++L IL+G +A +Y+L + V T+
Sbjct: 93 FCFPGYDAKTADLPPPRICGETWHDRVMSALGKLRLRILVGGHAHRYHLGTRLGV--TEL 150
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
V ++ F L HPS RN W+ R+PWFEA+++P L+ +++ +Q
Sbjct: 151 VKGWRSLPEGVFALPHPSWRNTAWLKRNPWFEAELLPVLRARVKEQMQ 198
>gi|150382548|ref|ZP_01921474.1| phage SPO1 DNA polymerase domain protein [Shewanella sediminis
HAW-EB3]
gi|150252422|gb|EDM90147.1| phage SPO1 DNA polymerase domain protein [Shewanella sediminis
HAW-EB3]
Length = 214
Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/183 (40%), Positives = 102/183 (55%), Gaps = 16/183 (8%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A+I I GQAPG KA E L + D SGDRLR W+GV FY FA++PM
Sbjct: 31 KPIIQVSADAKILIAGQAPGQKAHEQGLPFKDVSGDRLRSWLGVTSSQFYDPNLFAILPM 90
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKS-- 138
F +PG K+GD PP A+ W Q IL L ++LT+++G YA Y+L +
Sbjct: 91 GFCFPGNIIRNGKKAGDKPPIPLCAKSWRQAILSHLDKVELTVILGQYAIDYHLDNDTPD 150
Query: 139 ---------SVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQ 189
+ +T VA +K+Y P L HPSPRN IW+ RHP FE +++P LK ++
Sbjct: 151 SDKCSKKSSKISVTSAVASWKQYWPSQIVLPHPSPRNNIWLKRHPEFETEILPQLKLRVK 210
Query: 190 QII 192
II
Sbjct: 211 SII 213
>gi|86136543|ref|ZP_01055122.1| uracil-DNA glycosylase, putative [Roseobacter sp. MED193]
gi|85827417|gb|EAQ47613.1| uracil-DNA glycosylase, putative [Roseobacter sp. MED193]
Length = 196
Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 5 EEITKA-IMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
E IT+ I D T P+ +ARI I GQAPG++ ES + D SGDRL
Sbjct: 8 EAITQCRICTDRFAATHTGHQPRPVAWFDASARILIAGQAPGLRVHESGKPFTDPSGDRL 67
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLT 122
R+W+G+D FY A++PM F +PG ++ DLPP A+ W ++ LP+I LT
Sbjct: 68 RDWLGLDETAFYDRKRVAIVPMGFCFPGYNARNSDLPPPPICAKTWRDRVMQSLPNIALT 127
Query: 123 ILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVP 182
+ IG AQ ++L K V + VA ++ + P FPL HPS RN W+ R+PWFEA+++P
Sbjct: 128 LAIGAPAQAFHLGGK--VPVGQRVAAWRDHAPRVFPLPHPSWRNTGWLKRNPWFEAELLP 185
Query: 183 DLKKIIQQII 192
L+ +++++
Sbjct: 186 VLRGRVKELM 195
>gi|88795506|ref|ZP_01111202.1| hypothetical protein MADE_08356 [Alteromonas macleodii 'Deep
ecotype']
gi|88773219|gb|EAR04488.1| hypothetical protein MADE_08356 [Alteromonas macleodii 'Deep
ecotype']
Length = 195
Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/168 (41%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+F+ K A++ I+GQAPG+KA ES + +ND SGDRLR W+ V TFY+ +++PM
Sbjct: 31 PIFSTAKFAKVLIIGQAPGLKAHESGIAFNDASGDRLRSWLSVSKPTFYNPKLISILPMG 90
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
F +PG D PPRK A WHQ L + +LT+ IG YAQ+YYL + + LTD V
Sbjct: 91 FCFPGYKNGADAPPRKECAPTWHQAFLSQIRP-ELTVYIGRYAQQYYLPEYKN--LTDAV 147
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
+ L HPS RN W++++ WFE + +P L+ + +Q+
Sbjct: 148 YTTFAANAGHVALPHPSGRNNRWLAKNKWFEEESLPMLQHYVSNALQN 195
>gi|83854714|ref|ZP_00948244.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. NAS-14.1]
gi|83842557|gb|EAP81724.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. NAS-14.1]
Length = 231
Score = 134 bits (336), Expect = 4e-30, Method: Composition-based stats.
Identities = 69/159 (43%), Positives = 97/159 (61%), Gaps = 3/159 (1%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KG 93
AR+ I QAPG+K E+ + D SG RLR+W+GVD TFY A+IPM F +PG
Sbjct: 73 ARLLIASQAPGLKVHEANTPFWDASGKRLRDWLGVDETTFYDRSRVAIIPMAFCFPGYDA 132
Query: 94 KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYL 153
K DLPP A+ W LD +PDI+LT+LIG YA +Y+L ++V T VA ++ +
Sbjct: 133 KGSDLPPPPICAKTWRAGALDTVPDIRLTVLIGAYAMRYHLPGFTTV--TRAVADWQNHP 190
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
F L HPS RN W+ ++PWFE V+P L+ ++ ++
Sbjct: 191 KGVFALPHPSWRNTGWLKKNPWFEEDVLPRLRAAVRNVL 229
>gi|56695852|ref|YP_166203.1| uracil-DNA glycosylase, putative [Silicibacter pomeroyi DSS-3]
gi|56677589|gb|AAV94255.1| uracil-DNA glycosylase, putative [Silicibacter pomeroyi DSS-3]
Length = 208
Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats.
Identities = 65/159 (40%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGK 94
AR+ I GQAPG + S + D SGDRLR+W+G+ +TFY AV+PM F +PG
Sbjct: 42 ARLLIAGQAPGARVHASGRPFTDPSGDRLRDWLGIGEETFYDRSRVAVVPMAFCFPGYNS 101
Query: 95 SG-DLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYL 153
G DLPP + WH ++ L ++ L++L+G +A KY+L +S V T+TVA ++ +
Sbjct: 102 QGADLPPPPVCGKTWHNQVMGELGEMPLSVLVGGHALKYHLGARSPV--TETVAAWRDHA 159
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
P F L HPS RN W+ ++PWFEA+++P L+ +++++
Sbjct: 160 PRVFALPHPSWRNTGWLRKNPWFEAELLPVLRARVKEVL 198
>gi|126739939|ref|ZP_01755630.1| uracil-DNA glycosylase, putative [Roseobacter sp. SK209-2-6]
gi|126719171|gb|EBA15882.1| uracil-DNA glycosylase, putative [Roseobacter sp. SK209-2-6]
Length = 204
Score = 133 bits (335), Expect = 5e-30, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TA I + GQAPG + S + D SG+RLR+WMGV FY AV+P+
Sbjct: 36 PVVWLSSTASILVSGQAPGARVHASGKPFTDPSGERLRQWMGVSDAEFYDLKKVAVLPLA 95
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K DLPP A+ WH ++ +P+++L +L+G YAQK++L K SV TD
Sbjct: 96 FCFPGYNAKGSDLPPPPLCARTWHAQVMQEMPNLRLKLLVGGYAQKWHLGTKQSV--TDC 153
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
VA ++ FPL HPS RN W+ ++PWFE +++P L+K ++Q++
Sbjct: 154 VASWRNAPEGVFPLPHPSWRNTGWLKKNPWFEEELLPVLQKRVRQVL 200
>gi|49474251|ref|YP_032293.1| hypothetical protein BQ06460 [Bartonella quintana str. Toulouse]
gi|49239755|emb|CAF26137.1| hypothetical protein [Bartonella quintana str. Toulouse]
Length = 211
Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 106/174 (60%), Gaps = 8/174 (4%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TA I I GQAPG++ ES + +ND SG+RLR W+ V D FY+ FA++PM
Sbjct: 38 PVVYLSDTASIAIAGQAPGLRVHESSIPFNDCSGERLRNWLNVTSDEFYNRSLFAIVPMG 97
Query: 87 FYYPGKGKS-GDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG K+ DLPPR+ ++ WH+ + +P I+L + IG+YAQK+++ + ++ T
Sbjct: 98 FCFPGYDKNKSDLPPRRECSEIWHEKVFQAMPQIKLVLAIGSYAQKWHIAELKHKTVSAT 157
Query: 146 VAHYKKYLP-------DYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V+ +K L + PL HPS RN W+ ++PWF +++ L+ ++++ +
Sbjct: 158 VSDWKNILSIRQPRGYNVMPLPHPSWRNTAWLQKNPWFNDELIVYLRSLVRKFL 211
>gi|90418085|ref|ZP_01225997.1| putative uracil-DNA glycosylase [Aurantimonas sp. SI85-9A1]
gi|90337757|gb|EAS51408.1| putative uracil-DNA glycosylase [Aurantimonas sp. SI85-9A1]
Length = 209
Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats.
Identities = 65/173 (37%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ A TAR+ I GQAPG A S +ND SG RLR+W+G+ + FY S A++PM
Sbjct: 37 PVLALSGTARLLIAGQAPGNLADRSTTPFNDPSGVRLRDWLGLSPEVFYDSARVAILPMG 96
Query: 87 FYYPGKGK-SGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG GD PPR WH + +P I+L + IG +AQ++++ + LT+T
Sbjct: 97 FCFPGTDPMGGDRPPRIECRAAWHDRAMAAMPQIELILAIGQHAQRFHIASGAGRSLTET 156
Query: 146 VAHYKKYLPD------YFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V +++ L + PL HPS RN W+ RHPWF +++P+L++ + +++
Sbjct: 157 VTNWRTILAEGGRFAPVLPLPHPSWRNSGWLKRHPWFGEELLPELRRRVGELV 209
>gi|149118990|ref|ZP_01845471.1| putative uracil-DNA glycosylase protein [Methylobacterium sp. 4-46]
gi|148523148|gb|EDK96064.1| putative uracil-DNA glycosylase protein [Methylobacterium sp. 4-46]
Length = 204
Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TAR+ I QAPG +A S + D SG RLR W+G+D TFY A++PM
Sbjct: 33 PIVQGSATARLCIASQAPGHRAFRSGRPFQDPSGRRLRAWLGLDEATFYDPARIAILPMG 92
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
+PG GDLPPR+ A+ W +L LP + L ++IG YAQ ++L ++ LT T
Sbjct: 93 ACFPGHDAAGGDLPPRRECAETWRARLLAGLPALDLVLVIGQYAQAWHL-GRAPGGLTGT 151
Query: 146 VAHYKKYL-----PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQI 191
VA +++ P PL HPS RN W+ RHPWFEA+++P L++ + ++
Sbjct: 152 VARWRELFAEPRRPRVLPLPHPSWRNSGWLKRHPWFEAELLPVLRREVARL 202
>gi|24373341|ref|NP_717384.1| phage SPO1 DNA polymerase domain protein [Shewanella oneidensis
MR-1]
gi|24347595|gb|AAN54828.1|AE015621_6 phage SPO1 DNA polymerase domain protein [Shewanella oneidensis
MR-1]
Length = 223
Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 33/200 (16%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A ARI I GQAPG+K + ++D SG+RLR W+ V + FY FA++PM
Sbjct: 23 KPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRAWLNVSREQFYDPALFAIVPM 82
Query: 86 DFYYPG----KG-KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQ---- 136
F +PG KG K GD PPR A WH+ +L L+P+I+L I++G YA Y+L +
Sbjct: 83 GFCFPGNIERKGKKQGDKPPRPECAATWHKALLALMPNIELVIVLGQYAMDYHLSRLLMD 142
Query: 137 ------------------------KSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSR 172
+ LT V + Y P + HPSPRN +W+ +
Sbjct: 143 NMHKNRGFNSTPLAAAHTIGKATSNKKITLTQAVEQWPLYWPQLMVMPHPSPRNNLWLKQ 202
Query: 173 HPWFEAQVVPDLKKIIQQII 192
HP FE ++P L+ I ++
Sbjct: 203 HPEFEQHLIPTLRSRISSLL 222
>gi|83941237|ref|ZP_00953699.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. EE-36]
gi|83847057|gb|EAP84932.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. EE-36]
Length = 231
Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats.
Identities = 68/159 (42%), Positives = 97/159 (61%), Gaps = 3/159 (1%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KG 93
AR+ I QAPG+K E+ + D SG RLR+W+GVD TFY A+IPM F +PG
Sbjct: 73 ARLLIASQAPGLKVHEANTPFWDASGKRLRDWLGVDETTFYDRNRVAIIPMAFCFPGYDA 132
Query: 94 KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYL 153
K DLPP A+ W LD +PD++LT+LIG YA +Y+L ++V T VA ++ +
Sbjct: 133 KGSDLPPPPICAKTWRARALDTVPDVRLTVLIGAYAMRYHLPGFTTV--TRAVADWQNHP 190
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
F L HPS RN W+ ++PWFE V+P L+ ++ ++
Sbjct: 191 KGVFALPHPSWRNTGWLKKNPWFEEDVLPRLRAAVRNVL 229
>gi|114707278|ref|ZP_01440175.1| hypothetical protein FP2506_03630 [Fulvimarina pelagi HTCC2506]
gi|114537159|gb|EAU40286.1| hypothetical protein FP2506_03630 [Fulvimarina pelagi HTCC2506]
Length = 212
Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 9/198 (4%)
Query: 3 SLEEITKAIMADSQNKVFTEKNIEP--LFAAPKTARINIVGQAPGIKAQESRLYWNDKSG 60
+L+ I + ++N + IEP + A TARI + GQAPG A ++ +ND SG
Sbjct: 13 ALQRIIETCRICAENPIGEPLPIEPNPVLALSDTARILVAGQAPGNLADKTSKPFNDPSG 72
Query: 61 DRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDI 119
RLR+WMG+ + FY S A++PM F +PG K GD PPRK WH+ + +P I
Sbjct: 73 IRLRDWMGIGPELFYDSTRVAILPMGFCFPGYDAKGGDKPPRKECRLTWHERAMAAMPQI 132
Query: 120 QLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPD------YFPLVHPSPRNQIWMSRH 173
+L + IG YAQ +++ + LT+TV +++ L PL HPS RN W+ ++
Sbjct: 133 ELVLAIGAYAQSFHIAKGRGRTLTETVMNWRDILAGGGKYAAVIPLPHPSWRNNGWLRKN 192
Query: 174 PWFEAQVVPDLKKIIQQI 191
PWF ++P+L+ + ++
Sbjct: 193 PWFGEDLLPELRTQVARL 210
>gi|69936867|ref|ZP_00631622.1| Uracil-DNA glycosylase superfamily [Paracoccus denitrificans
PD1222]
gi|119383981|ref|YP_915037.1| Uracil-DNA glycosylase superfamily [Paracoccus denitrificans
PD1222]
gi|119373748|gb|ABL69341.1| Uracil-DNA glycosylase superfamily [Paracoccus denitrificans
PD1222]
Length = 220
Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats.
Identities = 65/163 (39%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Query: 35 ARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPG-KG 93
ARI +VGQAPG++ + + D+SG+RLR+WMGV FY A++PM F +PG
Sbjct: 55 ARILVVGQAPGMRVHLAGRPFADRSGNRLRDWMGVSDAEFYDRSRIAIVPMAFCFPGYDA 114
Query: 94 KSGDLPPRKGFAQKWHQPIL-DLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKY 152
K DLPP A+ W + ++ +L P QLT+L+G +AQ+++L + +T TVA ++ +
Sbjct: 115 KGADLPPPPICARTWRERVMAELQP--QLTLLVGGHAQRWHLGAAARGGVTQTVADWRAH 172
Query: 153 LPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
P FPL HPS RN W+ R+PWF+A ++P+L+ + +++ +
Sbjct: 173 GPHIFPLPHPSWRNTGWLRRNPWFQADLLPELRAAVAALLREA 215
>gi|120599430|ref|YP_964004.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. W3-18-1]
gi|120559523|gb|ABM25450.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. W3-18-1]
Length = 228
Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats.
Identities = 73/220 (33%), Positives = 111/220 (50%), Gaps = 29/220 (13%)
Query: 3 SLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDR 62
S+ + I A +Q + +P+ A + ARI I GQAPGIK + + ++D SG+R
Sbjct: 6 SITSLLAKIRACNQCQAHLPLAAKPILQASRQARILIAGQAPGIKTHDKGIPFDDASGER 65
Query: 63 LREWMGVDYDTFYHSGYFAVIPMDFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLP 117
LR W+ V + FY+ FA+IPM F +PG K GD PPR A WH +L L+P
Sbjct: 66 LRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDKPPRPECAATWHPQLLALMP 125
Query: 118 DIQLTILIGNYAQKYYLH------------------------QKSSVKLTDTVAHYKKYL 153
I+L +++G YA Y+L ++ S+ +T +++
Sbjct: 126 QIELIVILGQYAIDYHLPRELFTESTTPLDKLDTATHTPRKLKQKSITVTQATEQWQQCW 185
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
P Y L HPSPRN W+ +HP FE +P L+ + ++Q
Sbjct: 186 PTYIVLPHPSPRNNRWLKQHPEFETDQLPRLRARVLSLLQ 225
>gi|121602558|ref|YP_989136.1| hypothetical protein BARBAKC583_0849 [Bartonella bacilliformis
KC583]
gi|120614735|gb|ABM45336.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 211
Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 104/174 (59%), Gaps = 8/174 (4%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TA I I GQAPG++ ES + +ND+SG+ LR W+ V + FY FA++PM
Sbjct: 38 PVAYLSDTASIAIAGQAPGLRVHESSIPFNDRSGETLRNWLSVTRNQFYDRSLFAIVPMG 97
Query: 87 FYYPGKGKS-GDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
F +PG ++ DLPPR+ + WH+ + +P I+L + IG+YAQK+++ +++T
Sbjct: 98 FCFPGYDQNKSDLPPRRECQEMWHEEVFQAMPQIKLVLAIGSYAQKWHITGLKHKTVSET 157
Query: 146 VAHYKKYLP-------DYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
V+ +K L + PL HPS RN W+ +HPWF+ +++ L+ ++ + +
Sbjct: 158 VSDWKNILSIRQPRGYNVIPLPHPSWRNTFWLQKHPWFQDELIVYLRHLVHKFL 211
>gi|114764515|ref|ZP_01443740.1| uracil-DNA glycosylase, putative [Roseovarius sp. HTCC2601]
gi|114543082|gb|EAU46101.1| uracil-DNA glycosylase, putative [Roseovarius sp. HTCC2601]
Length = 198
Score = 130 bits (326), Expect = 5e-29, Method: Composition-based stats.
Identities = 65/174 (37%), Positives = 104/174 (59%), Gaps = 3/174 (1%)
Query: 21 TEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYF 80
T + P+ AR+ I QAPG++A + ++D SG RLR W+G+D TF+
Sbjct: 27 TRHSPRPVVWFAPGARLLIASQAPGMRAHNAARPFDDPSGIRLRAWLGLDDATFWDRSRV 86
Query: 81 AVIPMDFYYPGKGKSG-DLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSS 139
A++PM F +PG G DLPP WH + L +++L + IG YA +Y+L K+
Sbjct: 87 AIMPMAFCFPGYDAQGSDLPPPPICRHTWHDRLFAALGEVRLRLYIGGYAHRYHLGVKTG 146
Query: 140 VKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
V T+TV +++ +LPD PL HPS RN W+ R+PWFE +++P L+ ++++++
Sbjct: 147 V--TETVRNWRDHLPDAIPLPHPSWRNTAWLKRNPWFEDELLPVLRARVREVME 198
>gi|49475577|ref|YP_033618.1| hypothetical protein BH08120 [Bartonella henselae str. Houston-1]
gi|49238384|emb|CAF27611.1| hypothetical protein [Bartonella henselae str. Houston-1]
Length = 211
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/175 (35%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A I I GQAPG++ ES + +ND+SG+RLR W+ V D FY+ FA++PM
Sbjct: 37 KPVVYLSNRALIAIAGQAPGLRVHESSIPFNDRSGERLRNWLDVTRDEFYNRSLFAIVPM 96
Query: 86 DFYYPGKGKS-GDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTD 144
F +PG ++ DLPPR+ + WH+ + +P I+L + IG+YAQK+++ + ++
Sbjct: 97 GFCFPGYDQNKSDLPPRRECQEIWHEKVFQAMPQIKLVLAIGSYAQKWHIAKLKHKTVSA 156
Query: 145 TVAHYKKYLP-------DYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
TV+ +K L + PL HPS RN W+ ++PWF +++ L+ ++++ +
Sbjct: 157 TVSDWKNILSIRQPRGYNVMPLPHPSWRNTSWLQKNPWFNDELIVSLRSLVRKFL 211
>gi|124547344|ref|ZP_01706275.1| phage SPO1 DNA polymerase domain protein [Shewanella putrefaciens
200]
gi|124509346|gb|EAY53427.1| phage SPO1 DNA polymerase domain protein [Shewanella putrefaciens
200]
Length = 228
Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 29/220 (13%)
Query: 3 SLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDR 62
S+ + I A +Q + +P+ A + ARI I GQAPGIK + + ++D SG+R
Sbjct: 6 SMTSLLAKIRACNQCQAHLPLAAKPILQASRQARILIAGQAPGIKTHDKGIPFDDASGER 65
Query: 63 LREWMGVDYDTFYHSGYFAVIPMDFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLP 117
LR W+ V + FY+ FA+IPM F +PG K GD PPR A WH +L L+P
Sbjct: 66 LRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDNPPRPECAATWHPQLLALMP 125
Query: 118 DIQLTILIGNYAQKYYLHQKSSVKLT------DTVAHYKKYL------------------ 153
I+L +++G YA Y+L ++ + T DT H + L
Sbjct: 126 QIELIVILGQYAIDYHLPRELFTESTTPLDKLDTATHTPRKLKQKSITVTQATXXXXXXX 185
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
P Y L HPSPRN W+ +HP FE +P L+ + ++Q
Sbjct: 186 PTYIVLPHPSPRNNRWLKQHPEFETDQLPRLRARVLSLLQ 225
>gi|113970849|ref|YP_734642.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. MR-4]
gi|113885533|gb|ABI39585.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. MR-4]
Length = 240
Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 28/198 (14%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A ARI I GQAPG+K + ++D SG+RLR W+ V + FY FA++PM
Sbjct: 40 KPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRAWLNVSREQFYDPALFAIVPM 99
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV 140
F +PG K GD PPR A WH +L L+P I+L +++G YA Y+L + ++
Sbjct: 100 GFCFPGTIERNGKKQGDKPPRPECAATWHAKLLALMPQIELVLVLGQYAIDYHLPRTRAI 159
Query: 141 KLTD-----------------------TVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFE 177
TD + + Y P + HPSPRN +W+ +HP FE
Sbjct: 160 DTTDEALSSQAIVVSTPQTNKKITVTQAIEQWSLYWPRLMVMPHPSPRNNLWLKQHPEFE 219
Query: 178 AQVVPDLKKIIQQIIQSS 195
+ +P L+ I ++ SS
Sbjct: 220 REQLPTLQARIAGLLASS 237
>gi|114048074|ref|YP_738624.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. MR-7]
gi|113889516|gb|ABI43567.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. MR-7]
Length = 240
Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 28/198 (14%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A ARI I GQAPG+K + ++D SG+RLR W+ V + FY FA++PM
Sbjct: 40 KPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRAWLNVSREQFYDPALFAIVPM 99
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV 140
F +PG K GD PPR A WH +L L+P I+L +++G YA Y+L + ++
Sbjct: 100 GFCFPGTIERNGKKQGDKPPRPECAATWHTKLLALMPQIELVLVLGQYAIDYHLPRTRAI 159
Query: 141 KLTD-----------------------TVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFE 177
TD + + Y P + HPSPRN +W+ +HP FE
Sbjct: 160 DTTDDALSSQAITISTPQTNKKITVTQAIEQWSLYWPRLMVMPHPSPRNNLWLKQHPEFE 219
Query: 178 AQVVPDLKKIIQQIIQSS 195
+ +P L+ I ++ SS
Sbjct: 220 REQLPTLQARIAGLLASS 237
>gi|146292574|ref|YP_001182998.1| phage SPO1 DNA polymerase domain protein [Shewanella putrefaciens
CN-32]
gi|145564264|gb|ABP75199.1| phage SPO1 DNA polymerase domain protein [Shewanella putrefaciens
CN-32]
Length = 228
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 29/220 (13%)
Query: 3 SLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDR 62
S+ + I A +Q + +P+ A + ARI I GQAPGIK + + ++D SG+R
Sbjct: 6 SMTSLLAKIRACNQCQAHLPLAAKPILQASRQARILIAGQAPGIKTHDKGIPFDDASGER 65
Query: 63 LREWMGVDYDTFYHSGYFAVIPMDFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLP 117
LR W+ V + FY+ FA+IPM F +PG K GD PPR A WH +L L+P
Sbjct: 66 LRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDKPPRPECAATWHPQLLALMP 125
Query: 118 DIQLTILIGNYAQKYYLHQKSSVKLT------DTVAHYKKYL------------------ 153
I+L +++G YA Y+L ++ + T DT H + L
Sbjct: 126 QIELIVILGQYAIDYHLPRELFTESTTPLDRLDTATHTPRKLKQKYITVTQATEQWQQCW 185
Query: 154 PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
P Y L HPSPRN W+ +HP FE +P L+ + ++Q
Sbjct: 186 PTYIVLPHPSPRNNRWLKQHPEFETDQLPRLRARVLSLLQ 225
>gi|153899792|ref|ZP_02020355.1| Uracil-DNA glycosylase superfamily [Methylobacterium extorquens
PA1]
gi|151589248|gb|EDN52659.1| Uracil-DNA glycosylase superfamily [Methylobacterium extorquens
PA1]
Length = 232
Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 7/172 (4%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TAR+ I QAPG +A S + ++D SG RLR+W+G+D FY A++PM
Sbjct: 57 PVVQGSATARLLIASQAPGNRAHRSGIPFSDPSGRRLRDWLGLDEAAFYDPARVAILPMG 116
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
+PG K GD PPR+ A W +L LP + L ++IG YAQ ++L + LT+T
Sbjct: 117 ACFPGLDAKGGDRPPRRECAPAWRADLLAGLPQLDLILVIGQYAQAWHLGPRPG-GLTET 175
Query: 146 VAHYKKYL-----PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQII 192
VA ++ L P PL HPS RN W+ +PWFEA+++P L+ + +++
Sbjct: 176 VARWRAILDASARPRVLPLPHPSWRNNGWLRTNPWFEAELLPVLRAEVARVM 227
>gi|156448496|ref|ZP_02054881.1| Uracil-DNA glycosylase superfamily [Methylobacterium
chloromethanicum CM4]
gi|156193052|gb|EDO25236.1| Uracil-DNA glycosylase superfamily [Methylobacterium
chloromethanicum CM4]
Length = 232
Score = 127 bits (318), Expect = 4e-28, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 100/174 (57%), Gaps = 7/174 (4%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TAR+ I QAPG +A S + ++D SG RLR W+G+D FY A++PM
Sbjct: 57 PVVQGSATARLLIASQAPGNRAHRSGIPFSDPSGRRLRAWLGLDEVAFYDPARVAILPMG 116
Query: 87 FYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
+PG K GD PPR+ A W +L LP + L ++IG YAQ ++L + LT+T
Sbjct: 117 ACFPGLDAKGGDRPPRRECAPTWRADLLAGLPQLDLILVIGQYAQAWHLGPRPG-GLTET 175
Query: 146 VAHYKKYL-----PDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQS 194
VA ++ L P PL HPS RN W+ +PWFEA+++P L+ + + +++
Sbjct: 176 VARWRAILDASARPRVLPLPHPSWRNNGWLRTNPWFEAELLPVLRAEVARAMEA 229
>gi|117921121|ref|YP_870313.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. ANA-3]
gi|117613453|gb|ABK48907.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. ANA-3]
Length = 237
Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 4 LEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRL 63
L E+ K I A + +P+ A ARI I GQAPG+K + ++D SG+RL
Sbjct: 18 LSELLKQIRACQLCQAELPLPAKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERL 77
Query: 64 REWMGVDYDTFYHSGYFAVIPMDFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPD 118
R W+ V + FY FA++PM F +PG K GD PPR A WH +L L+P
Sbjct: 78 RAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECAATWHAKLLALMPQ 137
Query: 119 IQLTILIGNYAQKYYLHQKSS-------------------VKLTDTVAHYKKYLPDYFPL 159
I+L +++G YA Y+L + + + +T + + + P +
Sbjct: 138 IELVLVLGQYAIDYHLPRAQAIGALNSQAIAVSNPQANKKITVTQAIEQWSLHWPRLMVM 197
Query: 160 VHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
HPSPRN +W+ +HP FE + +P L+ I ++ S+
Sbjct: 198 PHPSPRNNLWLKQHPEFEHEHLPTLQARIADLLAST 233
>gi|110678967|ref|YP_681974.1| hypothetical protein RD1_1663 [Roseobacter denitrificans OCh 114]
gi|109455083|gb|ABG31288.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 198
Score = 124 bits (310), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/169 (36%), Positives = 93/169 (55%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+F + A+I IVGQAPG ++D SGDRLR W+G++ FY + PM
Sbjct: 27 PIFQLDERAKILIVGQAPGRITHLKNRPFDDPSGDRLRGWLGIEKSAFYGDPRIGIFPMG 86
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTV 146
+PG G SGD PP A W + + L ++LT+++G YA ++L S + V
Sbjct: 87 LCFPGSGPSGDKPPPDICAMTWREKTMRALKHVELTLVLGAYAIAWHLPHLSRQSVVQAV 146
Query: 147 AHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS 195
H F L HPSPRN W+ ++PWFEA VVP +++ +++ ++ +
Sbjct: 147 RHASDGEDRMFVLPHPSPRNNRWLKQNPWFEADVVPRIRQNVRRSLREA 195
>gi|154247254|ref|YP_001418212.1| hypothetical protein Xaut_3326 [Xanthobacter autotrophicus Py2]
gi|154161339|gb|ABS68555.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
Length = 225
Score = 122 bits (307), Expect = 9e-27, Method: Composition-based stats.
Identities = 70/183 (38%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ TA I + QAPG K S + D SGDRLR+WMGV D FY + A+ PM
Sbjct: 39 PVLWVSDTAAILVASQAPGTKVHASGRPFTDASGDRLRQWMGVSDDEFYDASRIAIAPMG 98
Query: 87 FYYPGK-GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYL-------HQKS 138
F +PG+ GDLPPR+ A WH + LP +L + +G AQ Y+L H K+
Sbjct: 99 FCFPGQDAAGGDLPPRRECAATWHDTLFATLPAFRLILAVGRPAQAYHLARLGLRAHLKA 158
Query: 139 SVKLTDTVAHYKK---------YLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQ 189
S LT TV H+++ + + L HPS RN W+ R+P+FEA ++P L+ I
Sbjct: 159 S--LTQTVHHWREVRAAGMALAHPVAVYTLPHPSWRNTGWLKRNPFFEADLLPQLQADIA 216
Query: 190 QII 192
+ +
Sbjct: 217 RAL 219
>gi|742236|prf||2009317C adhB downstream ORF
Length = 213
Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 4/161 (2%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ AR+ I GQAPG + E+ + +ND SGDRLR W+G+ D FY S A++PM
Sbjct: 48 PVLHVSPHARLLIAGQAPGTRVHETGVSFNDASGDRLRGWLGMSRDVFYDSNRVAILPMA 107
Query: 87 FYYPGK-GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDT 145
YPG K GD PP A W + IL LLP+++LT+L+G+YAQ Y L + K+ +
Sbjct: 108 LCYPGVLPKGGDRPPPPECASLWRERILALLPNLRLTLLVGSYAQNYVLGKG---KVYER 164
Query: 146 VAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKK 186
H++ +LP YFPL HPS R W + P F+ +++P L++
Sbjct: 165 TEHFQDFLPQYFPLPHPSWRTGAWERKTPMFQEKIIPALRR 205
>gi|149378423|ref|ZP_01896118.1| hypothetical protein MDG893_00015 [Marinobacter algicola DG893]
gi|149357288|gb|EDM45815.1| hypothetical protein MDG893_00015 [Marinobacter algicola DG893]
Length = 129
Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats.
Identities = 55/104 (52%), Positives = 71/104 (68%)
Query: 27 PLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMD 86
P+ ++AR+ +VGQAPG + ++ L +ND SGDRLREWMGVD DTFY A++PM
Sbjct: 26 PVVQVSQSARLLVVGQAPGRRVHDTGLPFNDPSGDRLREWMGVDRDTFYDDQQLAILPMG 85
Query: 87 FYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQ 130
F YPG GKSGDLPPR A W +L+ L +QLT++IG YA
Sbjct: 86 FCYPGTGKSGDLPPRPECAPAWRDLLLERLEAVQLTLVIGQYAH 129
>gi|126173819|ref|YP_001049968.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS155]
gi|125997024|gb|ABN61099.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS155]
Length = 209
Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 91/180 (50%), Gaps = 38/180 (21%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPM 85
+P+ A ARI I GQAPG+K + ++D SG+RLR W+ V + FY FA++PM
Sbjct: 23 KPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRTWLNVTREQFYDPALFAIVPM 82
Query: 86 DFYYPGK-----GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV 140
F +PG K GD PPR A WHQ +L L+P I+L +++G YA Y+L ++SSV
Sbjct: 83 GFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQIELMVILGQYAIDYHLPRESSV 142
Query: 141 KL---------------------------------TDTVAHYKKYLPDYFPLVHPSPRNQ 167
+ T A +++Y P YF L HPSPR++
Sbjct: 143 AINLTSPLTEPQTTHINVSSSAKAKTIPKLKAITVTQACAQWQQYWPKYFVLPHPSPRSK 202
>gi|118590260|ref|ZP_01547663.1| hypothetical protein SIAM614_12118 [Stappia aggregata IAM 12614]
gi|118437232|gb|EAV43870.1| hypothetical protein SIAM614_12118 [Stappia aggregata IAM 12614]
Length = 137
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 8/136 (5%)
Query: 67 MGVDYDTFYHSGYFAVIPMDFYYPG-KGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILI 125
MG+D + FY +G A++PM F +PG K GDLPPR + WH + +P I+L ++I
Sbjct: 1 MGIDEEVFYDAGKLAIVPMGFCFPGLDTKGGDLPPRTECRKAWHDLLFAAMPQIELVLVI 60
Query: 126 GNYAQKYYLHQKSSVKLTDTVAHYKKYL-------PDYFPLVHPSPRNQIWMSRHPWFEA 178
G YAQ Y+L LT+TV++++++ P PL HPS RN W+ ++PWFE
Sbjct: 61 GQYAQAYHLGPSRQKSLTETVSNWRQHFDKREGGKPAVLPLPHPSWRNNAWLRKNPWFET 120
Query: 179 QVVPDLKKIIQQIIQS 194
++P L+ ++++ ++
Sbjct: 121 DLLPVLRDEVRRLTRT 136
>gi|91793009|ref|YP_562660.1| putative uracil-DNA glycosylase family protein [Shewanella
denitrificans OS217]
gi|91715011|gb|ABE54937.1| putative uracil-DNA glycosylase family protein [Shewanella
denitrificans OS217]
Length = 154
Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 25/133 (18%)
Query: 85 MDFYYPGKGKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQ-----KSS 139
M F YPGKG SGDL P A+ W Q ++ LP+I+L ++IG YA Y+L + K
Sbjct: 18 MGFCYPGKGPSGDLAPLAICAKTWRQALMAALPNIELILVIGQYAMAYHLPELLSQPKPK 77
Query: 140 VKLTDTVAHYKKYLPD--------------------YFPLVHPSPRNQIWMSRHPWFEAQ 179
+ + TV+ K+ L + PL HPSPRN IW+ R+PWFEAQ
Sbjct: 78 LTASPTVSPTKRSLTETVYAWYQSADKLPSKDNGCWTVPLPHPSPRNNIWLKRNPWFEAQ 137
Query: 180 VVPDLKKIIQQII 192
+P ++ + Q++
Sbjct: 138 CIPKMQAKVAQVL 150
>gi|78047880|ref|YP_364055.1| hypothetical protein XCV2324 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036310|emb|CAJ24001.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 185
Score = 83.6 bits (205), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 25 IEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIP 84
++P+F +A I I GQAPG + S + ++D SG RLR W+GVD DTFY A++P
Sbjct: 49 VQPVFQFHPSAPILIAGQAPGARVHASGVPFDDASGARLRAWLGVDRDTFYDPTRIAILP 108
Query: 85 MDFYYPGKGKSGDLPPR 101
M F YPG GKSGDLP R
Sbjct: 109 MGFCYPGTGKSGDLPLR 125
>gi|153818289|ref|ZP_01970956.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126511178|gb|EAZ73772.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
Length = 77
Score = 81.6 bits (200), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 116 LPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPW 175
LP+ QLT+LIG YAQ YYL K S LT+TV ++++ P PL HPSPRN +W+ HPW
Sbjct: 1 LPNRQLTLLIGQYAQHYYLSDKPST-LTETVQQWQRWAPSVLPLPHPSPRNTLWLKNHPW 59
Query: 176 FEAQVVPDLKKIIQQII 192
FE +VP L++ ++Q++
Sbjct: 60 FEQDIVPYLRQRVKQVL 76
>gi|42519569|ref|NP_965499.1| hypothetical protein LJ1692 [Lactobacillus johnsonii NCC 533]
gi|41583858|gb|AAS09465.1| hypothetical protein LJ_1692 [Lactobacillus johnsonii NCC 533]
Length = 81
Score = 79.3 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 2 TSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGD 61
+ ++I + I AD N+ FT++ I+PL+ A +ARINI+GQA G AQE +W+D SGD
Sbjct: 3 SEFQKIFQEIQADPDNESFTKQAIKPLYYASSSARINIIGQATGRIAQEKMKFWDDPSGD 62
Query: 62 RLREWMGVDYDTFYH 76
RLR W+GV D FY+
Sbjct: 63 RLRTWLGVSRDAFYY 77
>gi|148259783|ref|YP_001233910.1| hypothetical protein Acry_0771 [Acidiphilium cryptum JF-5]
gi|146401464|gb|ABQ29991.1| hypothetical protein Acry_0771 [Acidiphilium cryptum JF-5]
Length = 113
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 85 MDFYYPGK-GKSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLT 143
M YPG+ + GD PPR + W + +P I+LT+L+G++A Y+L + + +
Sbjct: 1 MGLCYPGRLARGGDAPPRPECGRLWQGRLRAAMPAIRLTLLVGSHAILYHLGKGA---ME 57
Query: 144 DTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVP 182
+ V + +LP+ FPL HPS R + W +R PWFE +V+P
Sbjct: 58 ERVRGFGAFLPERFPLPHPSWRTRAWAARRPWFETEVIP 96
>gi|106894165|ref|ZP_01361287.1| Uracil-DNA glycosylase superfamily [Clostridium sp. OhILAs]
gi|106774650|gb|EAT31212.1| Uracil-DNA glycosylase superfamily [Clostridium sp. OhILAs]
Length = 199
Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 91/172 (52%), Gaps = 9/172 (5%)
Query: 26 EPLFAAPKTARINIVGQAPGIKAQESRLYWNDKSGDRLR-EWMGVDYDTFYHSGYFAVIP 84
+P+ + ++I +GQAP K E+ +ND SG +LR EW + + FY+ F +
Sbjct: 32 QPVIQGNRRSKIMQIGQAPSKKVHETGRPFNDASGKKLRNEWYCISEEDFYNPDNFYIGS 91
Query: 85 MDFYYPGKG-KSGDLPPRKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYL--HQKSSVK 141
+ YPGK K GD P K A++W + L+L+ + ++ ILIG +A +++ + SS+
Sbjct: 92 IAHCYPGKNPKGGDRRPPKVCAEQWLRKELELVEN-EIYILIGGFAAEFFFPGEKLSSLV 150
Query: 142 LTDTVAHYKKYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQ 193
D + + K + L HPSP N W +P F + ++K + ++++
Sbjct: 151 FEDRIINGKT----AYILPHPSPLNMKWFKDYPEFMTDRIFKIRKKVHRVLK 198
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.320 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 794,715,701
Number of Sequences: 5470121
Number of extensions: 34734596
Number of successful extensions: 75333
Number of sequences better than 1.0e-05: 211
Number of HSP's better than 0.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 74922
Number of HSP's gapped (non-prelim): 215
length of query: 195
length of database: 1,894,087,724
effective HSP length: 126
effective length of query: 69
effective length of database: 1,204,852,478
effective search space: 83134820982
effective search space used: 83134820982
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)