BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu1928
(94 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24380456|ref|NP_722411.1| hypothetical protein SMU.2125 ... 160 2e-38
gi|116512576|ref|YP_811483.1| Predicted transcriptional reg... 111 1e-23
gi|24378843|ref|NP_720798.1| hypothetical protein SMU.345c ... 99 7e-20
gi|150018144|ref|YP_001310398.1| transcriptional regulator,... 92 1e-17
gi|110800934|ref|YP_695582.1| transcriptional regulator [Cl... 87 3e-16
gi|110802393|ref|YP_698303.1| cinnamoyl ester hydrolase [Cl... 86 6e-16
gi|150017110|ref|YP_001309364.1| transcriptional regulator,... 84 2e-15
gi|150019779|ref|YP_001312033.1| transcriptional regulator,... 80 3e-14
gi|150018442|ref|YP_001310696.1| transcriptional regulator,... 79 8e-14
gi|150017079|ref|YP_001309333.1| transcriptional regulator,... 77 3e-13
gi|15893488|ref|NP_346837.1| Predicted transcriptional regu... 76 6e-13
gi|78356399|ref|YP_387848.1| putative transcriptional regul... 76 7e-13
gi|109647867|ref|ZP_01371770.1| transcriptional regulator, ... 74 2e-12
gi|89892824|ref|YP_516311.1| hypothetical protein DSY0078 [... 74 2e-12
gi|126697850|ref|YP_001086747.1| putative transcriptional r... 74 2e-12
gi|109647379|ref|ZP_01371282.1| transcriptional regulator, ... 73 5e-12
gi|150017587|ref|YP_001309841.1| transcriptional regulator,... 72 7e-12
gi|89893315|ref|YP_516802.1| hypothetical protein DSY0569 [... 72 1e-11
gi|83646231|ref|YP_434666.1| predicted transcriptional regu... 72 1e-11
gi|56962558|ref|YP_174284.1| hypothetical protein ABC0784 [... 71 2e-11
gi|154150624|ref|YP_001404242.1| transcriptional regulator,... 71 2e-11
gi|154684999|ref|YP_001420160.1| putative transcriptional r... 71 2e-11
gi|88796037|ref|ZP_01111722.1| hypothetical protein MADE_02... 70 3e-11
gi|23100260|ref|NP_693727.1| hypothetical protein OB2805 [O... 70 5e-11
gi|46580828|ref|YP_011636.1| transcriptional regulator, put... 70 5e-11
gi|146295749|ref|YP_001179520.1| transcriptional regulator,... 69 6e-11
gi|126699591|ref|YP_001088488.1| putative transcriptional r... 69 7e-11
gi|52784398|ref|YP_090227.1| hypothetical protein BLi00585 ... 69 8e-11
gi|57240872|ref|ZP_00368820.1| Transcriptional regulator, M... 69 9e-11
gi|68054885|ref|ZP_00539034.1| Protein of unknown function ... 69 9e-11
gi|27380944|ref|NP_772473.1| transcriptional regulatory pro... 69 1e-10
gi|118444543|ref|YP_879205.1| transcriptional regulator [Cl... 69 1e-10
gi|145953997|ref|ZP_01803004.1| hypothetical protein CdifQ_... 68 1e-10
gi|52081158|ref|YP_079949.1| HxlR [Bacillus licheniformis A... 68 1e-10
gi|111221899|ref|YP_712693.1| Putative MarR family transcri... 68 1e-10
gi|68229246|ref|ZP_00568443.1| Protein of unknown function ... 68 1e-10
gi|19705209|ref|NP_602704.1| Transcriptional regulator, Mar... 68 2e-10
gi|34762519|ref|ZP_00143516.1| Transcriptional regulator, M... 68 2e-10
gi|89098840|ref|ZP_01171721.1| HxlR [Bacillus sp. NRRL B-14... 68 2e-10
gi|52079026|ref|YP_077817.1| Pyridoxal-dependent decarboxyl... 68 2e-10
gi|154497753|ref|ZP_02036131.1| hypothetical protein BACCAP... 67 2e-10
gi|148323562|gb|EDK88812.1| MarR family transcriptional reg... 67 2e-10
gi|16077594|ref|NP_388408.1| hypothetical protein BSU05270 ... 67 2e-10
gi|29827219|ref|NP_821853.1| transcriptional regulator [Str... 67 3e-10
gi|56963192|ref|YP_174923.1| transcriptional regulator [Bac... 67 3e-10
gi|156868810|gb|EDO62182.1| hypothetical protein CLOLEP_010... 67 3e-10
gi|150018311|ref|YP_001310565.1| transcriptional regulator,... 67 3e-10
gi|125988103|dbj|BAF46969.1| putative transcriptional regul... 67 3e-10
gi|15603336|ref|NP_246410.1| hypothetical protein PM1471 [P... 67 3e-10
gi|149276979|ref|ZP_01883122.1| hypothetical protein PBAL39... 67 4e-10
gi|39995289|ref|NP_951240.1| hypothetical protein GSU0178 [... 67 4e-10
gi|15613572|ref|NP_241875.1| hypothetical protein BH1009 [B... 67 4e-10
gi|28379508|ref|NP_786400.1| transcription regulator (putat... 67 4e-10
gi|15679289|ref|NP_276406.1| hypothetical protein MTH1285 [... 66 5e-10
gi|126699280|ref|YP_001088177.1| putative transcriptional r... 66 5e-10
gi|154175007|ref|YP_001409160.1| putative transcriptional r... 66 7e-10
gi|150018759|ref|YP_001311013.1| transcriptional regulator,... 66 8e-10
gi|148379498|ref|YP_001254039.1| transcriptional regulator ... 65 8e-10
gi|148925699|ref|ZP_01809387.1| like protein of BLC protein... 65 8e-10
gi|28210228|ref|NP_781172.1| hypothetical protein CTC00480 ... 65 9e-10
gi|86356672|ref|YP_468564.1| putative transcriptional regul... 65 9e-10
gi|87118745|ref|ZP_01074644.1| hypothetical protein MED121_... 65 9e-10
gi|126653914|ref|ZP_01725758.1| transcriptional regulator [... 65 1e-09
gi|89208638|ref|ZP_01187134.1| Protein of unknown function ... 65 1e-09
gi|148545080|ref|YP_001272450.1| transcriptional regulator,... 65 1e-09
gi|95929022|ref|ZP_01311767.1| transcriptional regulator, H... 65 1e-09
gi|111222571|ref|YP_713365.1| Putative regulatory protein [... 65 1e-09
gi|92088423|ref|ZP_01273385.1| Helix-turn-helix, HxlR type ... 65 1e-09
gi|134046172|ref|YP_001097657.1| transcriptional regulator,... 65 1e-09
gi|86741979|ref|YP_482379.1| putative transcriptional regul... 65 2e-09
gi|154684833|ref|YP_001419994.1| HxlR [Bacillus amyloliquef... 65 2e-09
gi|68056146|ref|ZP_00540278.1| Protein of unknown function ... 65 2e-09
gi|15896581|ref|NP_349930.1| Predicted transcriptional regu... 64 2e-09
gi|86153121|ref|ZP_01071326.1| transcriptional regulator, M... 64 2e-09
gi|116873729|ref|YP_850510.1| hypothetical protein lwe2313 ... 64 2e-09
gi|89206479|ref|ZP_01185037.1| Protein of unknown function ... 64 2e-09
gi|148323312|gb|EDK88562.1| possible transcriptional regula... 64 2e-09
gi|68231750|ref|ZP_00570912.1| Protein of unknown function ... 64 2e-09
gi|15613218|ref|NP_241521.1| hypothetical protein BH0655 [B... 64 2e-09
gi|86141420|ref|ZP_01059966.1| hypothetical protein MED217_... 64 2e-09
gi|116334572|ref|YP_796099.1| Predicted transcriptional reg... 64 2e-09
gi|60681283|ref|YP_211427.1| putative transcriptional regul... 64 3e-09
gi|90423746|ref|YP_532116.1| putative transcriptional regul... 64 3e-09
gi|154497759|ref|ZP_02036137.1| hypothetical protein BACCAP... 64 3e-09
gi|149276879|ref|ZP_01883022.1| transcriptional regulator, ... 64 3e-09
gi|154149562|ref|YP_001403180.1| transcriptional regulator,... 64 3e-09
gi|32475968|ref|NP_868962.1| probable cinnamoyl ester hydro... 64 3e-09
gi|118579542|ref|YP_900792.1| transcriptional regulator, Hx... 64 4e-09
gi|15896733|ref|NP_350082.1| Predicted transcriptional regu... 63 5e-09
gi|92090225|ref|ZP_01275113.1| Helix-turn-helix, HxlR type ... 63 5e-09
gi|30021525|ref|NP_833156.1| Transcriptional regulator, Mar... 63 5e-09
gi|75760480|ref|ZP_00740519.1| Transcriptional regulator, M... 63 6e-09
gi|16077416|ref|NP_388229.1| positive regulator of hxlAB ex... 63 6e-09
gi|56965393|ref|YP_177125.1| transcriptional regulator [Bac... 63 6e-09
gi|83649349|ref|YP_437784.1| predicted transcriptional regu... 63 6e-09
gi|28378094|ref|NP_784986.1| transcription regulator (putat... 63 6e-09
gi|116629605|ref|YP_814777.1| Predicted transcriptional reg... 63 7e-09
gi|121535019|ref|ZP_01666837.1| transcriptional regulator, ... 62 7e-09
gi|30263379|ref|NP_845756.1| hypothetical protein BA3475 [B... 62 7e-09
gi|149276618|ref|ZP_01882761.1| hypothetical protein PBAL39... 62 8e-09
gi|20089231|ref|NP_615306.1| hypothetical protein MA0333 [M... 62 8e-09
gi|42782491|ref|NP_979738.1| hypothetical protein BCE_3438 ... 62 8e-09
gi|56552593|ref|YP_163432.1| hypothetical protein ZMO1697 [... 62 9e-09
gi|52079246|ref|YP_078037.1| hypothetical DNA binding prote... 62 9e-09
gi|47564547|ref|ZP_00235592.1| transcriptional regulator, M... 62 1e-08
gi|146301727|ref|YP_001196318.1| transcriptional regulator,... 62 1e-08
gi|58038969|ref|YP_190933.1| hypothetical protein GOX0498 [... 62 1e-08
gi|118469951|ref|YP_887224.1| transcriptional regulator [My... 62 1e-08
gi|15896187|ref|NP_349536.1| Predicted transcriptional regu... 62 1e-08
gi|150017975|ref|YP_001310229.1| transcriptional regulator,... 62 1e-08
gi|52142113|ref|YP_084716.1| possible transcriptional regul... 62 1e-08
gi|73668903|ref|YP_304918.1| transcriptional regulator, Mar... 61 2e-08
gi|68231191|ref|ZP_00570363.1| Protein of unknown function ... 61 2e-08
gi|21227688|ref|NP_633610.1| transcriptional regulator, Mar... 60 3e-08
gi|152979731|ref|YP_001345360.1| transcriptional regulator,... 60 3e-08
gi|50084628|ref|YP_046138.1| hypothetical protein ACIAD1453... 60 3e-08
gi|39936285|ref|NP_948561.1| DUF24, predicted transcription... 60 3e-08
gi|153953370|ref|YP_001394135.1| Transcriptional regulator ... 60 3e-08
gi|1438847|dbj|BAA06435.1| homologue of hypothetical 17.6 k... 60 3e-08
gi|83950325|ref|ZP_00959058.1| Hypothetical transcriptional... 60 3e-08
gi|119490614|ref|ZP_01623019.1| Predicted transcriptional r... 60 3e-08
gi|153939374|ref|YP_001392715.1| putative transcriptional r... 60 4e-08
gi|54027480|ref|YP_121722.1| putative transcriptional regul... 60 4e-08
gi|150395877|ref|YP_001326344.1| transcriptional regulator,... 60 4e-08
gi|134102517|ref|YP_001108178.1| transcriptional regulator,... 60 4e-08
gi|15964790|ref|NP_385143.1| hypothetical protein SMc02381 ... 60 4e-08
gi|15896725|ref|NP_350074.1| Predicted transcriptional regu... 60 4e-08
gi|92114490|ref|YP_574418.1| putative transcriptional regul... 59 6e-08
gi|21220944|ref|NP_626723.1| hypothetical protein SCO2481 [... 59 6e-08
gi|126650578|ref|ZP_01722801.1| hypothetical protein BB1490... 59 7e-08
gi|46205091|ref|ZP_00049043.2| COG1733: Predicted transcrip... 59 7e-08
gi|17544929|ref|NP_518331.1| hypothetical protein RSc0210 [... 59 7e-08
gi|83589241|ref|YP_429250.1| putative transcriptional regul... 59 7e-08
gi|78061098|ref|YP_371006.1| putative transcriptional regul... 59 8e-08
gi|149278493|ref|ZP_01884630.1| hypothetical protein PBAL39... 59 8e-08
gi|116249215|ref|YP_765056.1| hypothetical protein pRL12055... 59 8e-08
gi|83747194|ref|ZP_00944237.1| Hypothetical Protein RRSL_02... 59 8e-08
gi|149180752|ref|ZP_01859255.1| transcriptional regulator, ... 59 8e-08
gi|146301067|ref|YP_001195658.1| transcriptional regulator,... 59 8e-08
gi|15792854|ref|NP_282677.1| hypothetical protein Cj1546 [C... 59 9e-08
gi|89890811|ref|ZP_01202320.1| transcriptional regulator, D... 59 1e-07
gi|81428618|ref|YP_395618.1| Putative transcriptional regul... 59 1e-07
gi|23097809|ref|NP_691275.1| hypothetical protein OB0354 [O... 59 1e-07
gi|86360091|ref|YP_471980.1| hypothetical protein RHE_PC000... 58 1e-07
gi|57238564|ref|YP_179695.1| transcriptional regulator, put... 58 1e-07
gi|88602813|ref|YP_502991.1| putative transcriptional regul... 58 1e-07
gi|91784027|ref|YP_559233.1| Putative transcriptional regul... 58 1e-07
gi|77978928|ref|ZP_00834351.1| COG1733: Predicted transcrip... 58 2e-07
gi|153895734|ref|ZP_02016315.1| helix-turn-helix, HxlR type... 58 2e-07
gi|54025775|ref|YP_120017.1| putative transcriptional regul... 58 2e-07
gi|70734284|ref|YP_257924.1| transcriptional regulator, put... 58 2e-07
gi|111222688|ref|YP_713482.1| Putative regulatory protein [... 58 2e-07
gi|51246560|ref|YP_066444.1| hypothetical protein DP2708 [D... 58 2e-07
gi|124879747|gb|EAY67103.1| hypothetical protein BCPG_05510... 58 2e-07
gi|15613300|ref|NP_241603.1| cinnamoyl ester hydrolase [Bac... 58 2e-07
gi|20138662|sp|Q93K57|MALR_FUSMR Putative regulatory protei... 58 2e-07
gi|106884867|ref|ZP_01352234.1| Helix-turn-helix, HxlR type... 58 2e-07
gi|77974527|ref|ZP_00830067.1| COG1733: Predicted transcrip... 58 2e-07
gi|76802048|ref|YP_327056.1| hypothetical protein NP2812A [... 58 2e-07
gi|99080048|ref|YP_612202.1| transcriptional regulator, Hxl... 58 2e-07
gi|149278465|ref|ZP_01884602.1| Transcriptional regulator, ... 57 2e-07
gi|91977625|ref|YP_570284.1| helix-turn-helix, HxlR type [R... 57 2e-07
gi|118028668|ref|ZP_01500130.1| transcriptional regulator, ... 57 2e-07
gi|116694403|ref|YP_728614.1| transcriptional regulator, Ar... 57 3e-07
gi|27380216|ref|NP_771745.1| transcriptional regulatory pro... 57 3e-07
gi|118039967|ref|ZP_01511365.1| transcriptional regulator, ... 57 3e-07
gi|116491842|ref|YP_803577.1| Predicted transcriptional reg... 57 3e-07
gi|146301585|ref|YP_001196176.1| transcriptional regulator,... 57 3e-07
gi|148324449|gb|EDK89699.1| possible transcriptional regula... 57 3e-07
gi|154150489|ref|YP_001404107.1| transcriptional regulator,... 57 3e-07
gi|50364866|ref|YP_053291.1| transcriptional regulator, mar... 57 3e-07
gi|123443552|ref|YP_001007525.1| hypothetical protein YE335... 57 3e-07
gi|126736032|ref|ZP_01751776.1| putative transcriptional re... 57 3e-07
gi|15888340|ref|NP_354021.1| hypothetical protein AGR_C_183... 57 4e-07
gi|150017921|ref|YP_001310175.1| transcriptional regulator,... 57 4e-07
gi|146301587|ref|YP_001196178.1| transcriptional regulator,... 57 4e-07
gi|148927414|ref|ZP_01810934.1| transcriptional regulator, ... 57 4e-07
gi|153010348|ref|YP_001371562.1| transcriptional regulator,... 57 4e-07
gi|148927398|ref|ZP_01810918.1| transcriptional regulator, ... 57 4e-07
gi|13476431|ref|NP_108001.1| hypothetical protein mll7749 [... 57 5e-07
gi|34540600|ref|NP_905079.1| hypothetical protein PG0823 [P... 57 5e-07
gi|152966561|ref|YP_001362345.1| transcriptional regulator,... 57 5e-07
gi|124002573|ref|ZP_01687426.1| transcriptional regulator, ... 56 5e-07
gi|124514560|gb|EAY56073.1| putative transcriptional regula... 56 5e-07
gi|153811530|ref|ZP_01964198.1| hypothetical protein RUMOBE... 56 5e-07
gi|119505196|ref|ZP_01627271.1| hypothetical protein MGP208... 56 5e-07
gi|90424907|ref|YP_533277.1| putative transcriptional regul... 56 6e-07
gi|34762968|ref|ZP_00143946.1| Transcriptional regulator, M... 56 6e-07
gi|116512074|ref|YP_809290.1| Predicted transcriptional reg... 56 6e-07
gi|16126079|ref|NP_420643.1| hypothetical protein CC_1836 [... 56 6e-07
gi|52080519|ref|YP_079310.1| putative transcriptional regul... 56 7e-07
gi|15789885|ref|NP_279709.1| hypothetical protein VNG0704C ... 56 7e-07
gi|29377247|ref|NP_816401.1| hypothetical protein EF2774 [E... 56 7e-07
gi|71082846|ref|YP_265565.1| Transcriptional regulator [Can... 56 7e-07
gi|22417094|gb|AAM96657.1| unknown [Sphingobium chloropheno... 56 8e-07
gi|148256800|ref|YP_001241385.1| putative transcriptional r... 56 8e-07
gi|27380481|ref|NP_772010.1| transcriptional regulatory pro... 55 8e-07
gi|153896603|ref|ZP_02017178.1| helix-turn-helix, HxlR type... 55 9e-07
gi|50119691|ref|YP_048858.1| putative transcriptional regul... 55 1e-06
gi|148256361|ref|YP_001240946.1| putative transcriptional r... 55 1e-06
gi|110638877|ref|YP_679085.1| transcriptional regulator [Cy... 55 1e-06
gi|145595513|ref|YP_001159810.1| helix-turn-helix, HxlR typ... 55 1e-06
gi|118713174|ref|ZP_01565741.1| transcriptional regulator, ... 55 1e-06
gi|95928656|ref|ZP_01311403.1| transcriptional regulator, H... 55 1e-06
gi|87121099|ref|ZP_01076990.1| transcriptional regulator, p... 55 1e-06
gi|77918692|ref|YP_356507.1| predicted transcriptional regu... 55 1e-06
gi|146341913|ref|YP_001206961.1| putative transcriptional r... 55 1e-06
gi|86360886|ref|YP_472773.1| probable transcriptional regul... 55 1e-06
gi|149376500|ref|ZP_01894261.1| putative transcriptional re... 55 1e-06
gi|90962651|ref|YP_536567.1| Transcriptional regulator, Mar... 55 1e-06
gi|110638683|ref|YP_678892.1| conserved hypothetical protei... 55 1e-06
gi|23130058|ref|ZP_00111877.1| COG1733: Predicted transcrip... 55 1e-06
gi|116333393|ref|YP_794920.1| Predicted transcriptional reg... 55 1e-06
gi|68233635|ref|ZP_00572749.1| Protein of unknown function ... 55 1e-06
gi|17546857|ref|NP_520259.1| hypothetical protein RSc2138 [... 55 1e-06
gi|77963224|ref|ZP_00827036.1| COG1733: Predicted transcrip... 55 1e-06
gi|119882101|ref|ZP_01648385.1| transcriptional regulator, ... 55 2e-06
gi|86740708|ref|YP_481108.1| putative transcriptional regul... 55 2e-06
gi|126650328|ref|ZP_01722556.1| hypothetical protein BB1490... 55 2e-06
gi|118589186|ref|ZP_01546593.1| hypothetical protein SIAM61... 55 2e-06
gi|30263363|ref|NP_845740.1| hypothetical protein BA3457 [B... 55 2e-06
gi|89055975|ref|YP_511426.1| putative transcriptional regul... 55 2e-06
gi|147920576|ref|YP_685627.1| predicted transcription regul... 55 2e-06
gi|84352090|ref|ZP_00977065.1| COG1733: Predicted transcrip... 55 2e-06
gi|149276777|ref|ZP_01882920.1| hypothetical protein PBAL39... 55 2e-06
gi|113940897|ref|ZP_01426715.1| helix-turn-helix, HxlR type... 55 2e-06
gi|110634473|ref|YP_674681.1| transcriptional regulator, Hx... 54 2e-06
gi|19746970|ref|NP_608106.1| hypothetical protein spyM18_21... 54 2e-06
gi|13472499|ref|NP_104066.1| hypothetical protein mll2818 [... 54 2e-06
gi|77958917|ref|ZP_00822943.1| COG1733: Predicted transcrip... 54 2e-06
gi|111224684|ref|YP_715478.1| putative transcriptional regu... 54 2e-06
gi|126347573|emb|CAJ89285.1| putative transcriptional regul... 54 2e-06
gi|89052852|ref|YP_508303.1| putative transcriptional regul... 54 2e-06
gi|68055442|ref|ZP_00539587.1| Protein of unknown function ... 54 2e-06
gi|90569658|gb|ABD94728.1| putative transcriptional regulat... 54 2e-06
gi|19704567|ref|NP_604129.1| Transcriptional regulator, Mar... 54 2e-06
gi|89899095|ref|YP_521566.1| putative transcriptional regul... 54 2e-06
gi|65317055|ref|ZP_00390014.1| COG1733: Predicted transcrip... 54 2e-06
gi|30021508|ref|NP_833139.1| Transcriptional regulator, Mar... 54 2e-06
gi|52142133|ref|YP_084697.1| transcriptional regulator, Mar... 54 2e-06
gi|109646653|ref|ZP_01370557.1| transcriptional regulator, ... 54 2e-06
gi|75760209|ref|ZP_00740265.1| Transcriptional regulator, M... 54 2e-06
gi|118051583|ref|ZP_01520131.1| transcriptional regulator, ... 54 2e-06
gi|83748904|ref|ZP_00945914.1| Hypothetical Protein RRSL_01... 54 2e-06
gi|153897119|ref|ZP_02017687.1| transcriptional regulator, ... 54 2e-06
gi|156451300|ref|ZP_02057677.1| transcriptional regulator, ... 54 2e-06
gi|87307250|ref|ZP_01089395.1| probable transcriptional reg... 54 3e-06
gi|92114681|ref|YP_574609.1| putative transcriptional regul... 54 3e-06
gi|115373208|ref|ZP_01460509.1| transcriptional regulatory ... 54 3e-06
gi|68055783|ref|ZP_00539924.1| Protein of unknown function ... 54 3e-06
gi|86142748|ref|ZP_01061187.1| putative transcriptional reg... 54 3e-06
gi|146300848|ref|YP_001195439.1| transcriptional regulator,... 54 3e-06
gi|30023096|ref|NP_834727.1| Transcriptional regulator, Mar... 54 3e-06
gi|146301555|ref|YP_001196146.1| transcriptional regulator,... 54 3e-06
gi|150004607|ref|YP_001299351.1| putative transcriptional r... 54 3e-06
gi|30022397|ref|NP_834028.1| Transcriptional regulator, Mar... 54 4e-06
gi|148323110|gb|EDK88360.1| possible transcriptional regula... 54 4e-06
gi|118470614|ref|YP_890560.1| transcriptional regulator [My... 54 4e-06
gi|21222551|ref|NP_628330.1| hypothetical protein SCO4153 [... 54 4e-06
gi|27380947|ref|NP_772476.1| transcriptional regulatory pro... 54 4e-06
gi|30265110|ref|NP_847487.1| hypothetical protein BA5311 [B... 54 4e-06
gi|116688207|ref|YP_833830.1| transcriptional regulator, Hx... 54 4e-06
gi|154685786|ref|YP_001420947.1| YkvN [Bacillus amyloliquef... 54 4e-06
gi|118734359|ref|ZP_01582863.1| transcriptional regulator, ... 54 4e-06
gi|124010212|ref|ZP_01694867.1| transcriptional regulator, ... 54 4e-06
gi|90962477|ref|YP_536393.1| Transcriptional regulator, Mar... 54 4e-06
gi|89893784|ref|YP_517271.1| hypothetical protein DSY1038 [... 53 4e-06
gi|149278528|ref|ZP_01884665.1| hypothetical protein PBAL39... 53 4e-06
gi|110600685|ref|ZP_01388899.1| Helix-turn-helix, HxlR type... 53 4e-06
gi|93279729|pdb|2FSW|A Chain A, Crystal Structure Of The Pu... 53 4e-06
gi|16078440|ref|NP_389259.1| hypothetical protein BSU13760 ... 53 5e-06
gi|121533375|ref|ZP_01665203.1| transcriptional regulator, ... 53 5e-06
gi|71083560|ref|YP_266279.1| probable transcription regulat... 53 5e-06
gi|86131485|ref|ZP_01050083.1| YdeP [Cellulophaga sp. MED13... 53 5e-06
gi|88803116|ref|ZP_01118642.1| Predicted transcriptional re... 53 5e-06
gi|154688157|ref|YP_001423318.1| YybR [Bacillus amyloliquef... 53 6e-06
gi|13472337|ref|NP_103904.1| hypothetical protein mlr2600 [... 53 6e-06
gi|116333050|ref|YP_794577.1| Predicted transcriptional reg... 53 6e-06
gi|126739436|ref|ZP_01755129.1| hypothetical protein RSK209... 53 6e-06
gi|149279708|ref|ZP_01885836.1| hypothetical protein PBAL39... 53 6e-06
gi|83646451|ref|YP_434886.1| predicted transcriptional regu... 53 6e-06
gi|91199766|emb|CAI78121.1| putative transcriptional regula... 53 6e-06
gi|90420644|ref|ZP_01228550.1| putative transcriptional reg... 53 6e-06
gi|108801938|ref|YP_642135.1| transcriptional regulator, Hx... 53 6e-06
gi|139438122|ref|ZP_01771675.1| Hypothetical protein COLAER... 53 6e-06
gi|118694644|ref|ZP_01552728.1| transcriptional regulator, ... 53 7e-06
gi|30264389|ref|NP_846766.1| hypothetical protein BA4543 [B... 53 7e-06
gi|52082001|ref|YP_080792.1| hypothetical protein BL03428 [... 53 7e-06
gi|1622733|gb|AAC44494.1| orf108; unknown function 52 7e-06
gi|75764941|ref|ZP_00744280.1| Transcriptional regulator, M... 52 7e-06
gi|116618053|ref|YP_818424.1| Predicted transcriptional reg... 52 7e-06
gi|85706593|ref|ZP_01037686.1| putative transcriptional reg... 52 8e-06
gi|149280415|ref|ZP_01886535.1| hypothetical protein PBAL39... 52 8e-06
gi|146319822|ref|YP_001199534.1| transcriptional regulatory... 52 8e-06
gi|110638483|ref|YP_678692.1| probable transcriptional regu... 52 9e-06
gi|110799582|ref|YP_695148.1| putative transcriptional regu... 52 1e-05
>gi|24380456|ref|NP_722411.1| hypothetical protein SMU.2125 [Streptococcus mutans UA159]
gi|24378484|gb|AAN59717.1|AE015033_12 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 94
Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats.
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD
Sbjct: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL
Sbjct: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
>gi|116512576|ref|YP_811483.1| Predicted transcriptional regulator [Lactococcus lactis subsp.
cremoris SK11]
gi|125624686|ref|YP_001033169.1| putative transcriptional regulator [Lactococcus lactis subsp.
cremoris MG1363]
gi|116108230|gb|ABJ73370.1| Predicted transcriptional regulator [Lactococcus lactis subsp.
cremoris SK11]
gi|124493494|emb|CAL98472.1| putative transcriptional regulator [Lactococcus lactis subsp.
cremoris MG1363]
Length = 100
Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/91 (53%), Positives = 76/91 (83%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+S+VM++ GGKW+L +LW+I ++ IRFNQL+REVNGIT +MLTRSL++L+ ++LV + D
Sbjct: 7 VSKVMDIFGGKWKLKILWIICNHEGIRFNQLRREVNGITNVMLTRSLELLMEHDLVIRKD 66
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
FQT+P HV+Y L+ KG+ L+P ++Q++ WG+
Sbjct: 67 FQTIPPHVEYYLTKKGEDLVPFMQQLDLWGR 97
>gi|24378843|ref|NP_720798.1| hypothetical protein SMU.345c [Streptococcus mutans UA159]
gi|24376720|gb|AAN58104.1|AE014882_7 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 104
Score = 99.0 bits (245), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+++VM+ + KW L + WVI++ IRFNQLKREV+GIT IMLTRSLD LI N+L+ K D
Sbjct: 11 LTRVMDALSSKWALQIFWVISQKSPIRFNQLKREVDGITKIMLTRSLDSLIQNKLIFKED 70
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
F+T PLH +Y L++KGK L+ LL +N WG+
Sbjct: 71 FKTWPLHTQYSLTNKGKELLNLLMSLNGWGR 101
>gi|150018144|ref|YP_001310398.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149904609|gb|ABR35442.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 121
Score = 91.7 bits (226), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+E++GGKWRL ++W I+ +SIR+N+LKR + GIT IMLTRSL L + L+++ ++
Sbjct: 20 HALEIIGGKWRLPIIWEISGSKSIRYNELKRSIPGITNIMLTRSLQALEEHGLIKRTEYN 79
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P HV+Y L+ L+P L IN+WGK
Sbjct: 80 KIPPHVEYSLTDDCNDLLPALAIINEWGK 108
>gi|110800934|ref|YP_695582.1| transcriptional regulator [Clostridium perfringens ATCC 13124]
gi|110675581|gb|ABG84568.1| transcriptional regulator [Clostridium perfringens ATCC 13124]
Length = 108
Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 66/91 (72%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ ++V+ GKWRL VLW ++ Y++IRFNQL++ V+GI+++MLTR L LI N+LV +
Sbjct: 14 IEHALKVLSGKWRLKVLWEVSSYENIRFNQLQKNVDGISSLMLTRVLKDLIDNKLVIRTQ 73
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
F +P HV+Y L+ G+SL P+++ + +GK
Sbjct: 74 FNEVPPHVEYSLTDLGRSLCPIIRLLEDFGK 104
>gi|110802393|ref|YP_698303.1| cinnamoyl ester hydrolase [Clostridium perfringens SM101]
gi|110682894|gb|ABG86264.1| cinnamoyl ester hydrolase [Clostridium perfringens SM101]
Length = 108
Score = 85.9 bits (211), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 63/91 (69%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ ++V+ GKWRL VLW + Y+SIRFNQL++ V GI+++MLTR L LI N LV +
Sbjct: 14 IEHALKVLSGKWRLKVLWEVYNYESIRFNQLQKNVEGISSLMLTRVLKDLIDNNLVIRTQ 73
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
F +P HV+Y L+ G+SL P+++ + +GK
Sbjct: 74 FNEVPPHVEYSLTDLGRSLCPIIRLLEDFGK 104
>gi|150017110|ref|YP_001309364.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149903575|gb|ABR34408.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 118
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/87 (48%), Positives = 62/87 (71%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+E++GGKWRL +L+VI + +SIR+N+LKR + GIT IMLTRSL L + LV++ +F +
Sbjct: 22 LEIIGGKWRLPILFVIYRTKSIRYNELKRNIPGITNIMLTRSLQSLEEHGLVKRKEFNKI 81
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P HV+Y L+ K L P + +N+ GK
Sbjct: 82 PPHVEYSLTDICKYLEPAYEVLNELGK 108
>gi|150019779|ref|YP_001312033.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149906244|gb|ABR37077.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 120
Score = 80.5 bits (197), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 64/87 (73%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++G KW+L ++W ++ S R+N+LKR+V G+T +MLT+SL L ++L+ + ++T+
Sbjct: 27 LDILGQKWKLPIMWYLSSKDSTRYNELKRKVKGVTNMMLTKSLKELEEHKLIVRTQYETI 86
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ +GK+L+P LK++ WG+
Sbjct: 87 PPRVEYSLTERGKALLPTLKELYVWGE 113
>gi|150018442|ref|YP_001310696.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149904907|gb|ABR35740.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 138
Score = 79.0 bits (193), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/94 (41%), Positives = 63/94 (67%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ +EV+GGKW+LN+L + + RFNQLKR+V+GIT ML SL L +EL+ +
Sbjct: 38 IKDALEVIGGKWKLNILGQLLRKDVCRFNQLKRDVSGITNTMLANSLRELENDELIIRNQ 97
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ +P+ V+Y L+ KG++L+PLL ++ W + Y+
Sbjct: 98 YNEMPVRVEYTLTDKGRNLLPLLYELTIWWEDYI 131
>gi|150017079|ref|YP_001309333.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149903544|gb|ABR34377.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 146
Score = 77.0 bits (188), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 62/87 (71%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++G KW+L +LW ++ R+++LKR+V GIT +MLT+SL L ++L+ + ++T+
Sbjct: 47 LDILGQKWKLPILWCLSNKDFTRYSELKRKVKGITNMMLTKSLKELEEHKLIVRTQYETI 106
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ +GK+L+P K++ WG+
Sbjct: 107 PPKVEYSLTERGKALLPTFKELYLWGE 133
>gi|15893488|ref|NP_346837.1| Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
gi|15023027|gb|AAK78177.1|AE007533_1 Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
Length = 115
Score = 76.3 bits (186), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 62/94 (65%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ +V+GGKWR+ ++W ++ +S+R+N++KR + IT IMLTRSL L LV++V+
Sbjct: 18 LVHTFDVIGGKWRIPIIWQLSVNKSMRYNEIKRSLPKITNIMLTRSLQSLEQYGLVKRVE 77
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ +P HV+Y L+ + L+P L +N+W K L
Sbjct: 78 YNKIPPHVEYSLTDRCNDLLPALVIMNEWSKKLL 111
>gi|78356399|ref|YP_387848.1| putative transcriptional regulator [Desulfovibrio desulfuricans
G20]
gi|78218804|gb|ABB38153.1| putative transcriptional regulator [Desulfovibrio desulfuricans
G20]
Length = 155
Score = 75.9 bits (185), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 58/89 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++GGKW+ +L+ + + RF +L+R + IT MLT+ L L + ++E+ + +
Sbjct: 47 IQLIGGKWKPIILYHLGTRGTHRFGELRRTIPNITQKMLTQQLRELEKDGIIERKVYPEV 106
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y LS+ G SLMP+LKQ+ QWGK Y
Sbjct: 107 PPKVEYSLSTTGHSLMPILKQLCQWGKDY 135
>gi|109647867|ref|ZP_01371770.1| transcriptional regulator, HxlR family [Desulfitobacterium
hafniense DCB-2]
gi|109640957|gb|EAT50512.1| transcriptional regulator, HxlR family [Desulfitobacterium
hafniense DCB-2]
Length = 121
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 57/90 (63%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ ++++GGKW+L +L +++ + R+N LKR++ GIT ML SL L + L+ +
Sbjct: 24 LGSALKIIGGKWKLPILCALHQDGTTRYNTLKRKIAGITNTMLVSSLKELEEDGLIVRRQ 83
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ +P+ V+Y L+ LMP+LKQ+ QWG
Sbjct: 84 YVEMPVRVEYTLTDVCDDLMPILKQLAQWG 113
>gi|89892824|ref|YP_516311.1| hypothetical protein DSY0078 [Desulfitobacterium hafniense Y51]
gi|89332272|dbj|BAE81867.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 113
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 57/90 (63%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ ++++GGKW+L +L +++ + R+N LKR++ GIT ML SL L + L+ +
Sbjct: 16 LGSALKIIGGKWKLPILCALHQDGTTRYNTLKRKIAGITNTMLVSSLKELEEDGLIVRRQ 75
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ +P+ V+Y L+ LMP+LKQ+ QWG
Sbjct: 76 YMEMPVRVEYTLTDVCDDLMPILKQLAQWG 105
>gi|126697850|ref|YP_001086747.1| putative transcriptional regulator [Clostridium difficile 630]
gi|145956212|ref|ZP_01805209.1| hypothetical protein CdifQ_04000315 [Clostridium difficile
QCD-32g58]
gi|115249287|emb|CAJ67100.1| putative transcriptional regulator [Clostridium difficile 630]
Length = 130
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 59/86 (68%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+++VGGKW+L ++ ++ IR++ +KR+++GIT ML +SL L + +V + + +
Sbjct: 24 LDIVGGKWKLPIICMLAVENPIRYSSIKRKLDGITNTMLAQSLKDLESTGIVHRKQYNEI 83
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+SKGKS++P+L+Q WG
Sbjct: 84 PPKVEYTLTSKGKSIVPILQQFANWG 109
>gi|109647379|ref|ZP_01371282.1| transcriptional regulator, HxlR family [Desulfitobacterium
hafniense DCB-2]
gi|109640469|gb|EAT50024.1| transcriptional regulator, HxlR family [Desulfitobacterium
hafniense DCB-2]
Length = 127
Score = 72.8 bits (177), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 57/87 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++V GGKW+ +L V++ IR+N +++E+ IT +L L LI +EL+E+ + +
Sbjct: 19 LDVFGGKWKARILCVLSTNTVIRYNAIRKELGNITDAVLAAMLKELIADELIERTQYNEI 78
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ +G+S++P+L+ I QW +
Sbjct: 79 PPKVEYALTDRGRSVLPILQNICQWSR 105
>gi|150017587|ref|YP_001309841.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149904052|gb|ABR34885.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 113
Score = 72.4 bits (176), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 61/91 (67%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ +++V+GGKW+L +L ++ K + +RFN+LKRE+NGIT + L+ L L ++V+++
Sbjct: 14 LQYLLKVIGGKWKLTILCILTKKEVVRFNELKRELNGITNMSLSNCLQELEQYKIVKRIQ 73
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+ +P V+Y L+ K L+P LK ++ W K
Sbjct: 74 YLEMPPRVEYSLTENSKKLIPSLKGLSDWAK 104
>gi|89893315|ref|YP_516802.1| hypothetical protein DSY0569 [Desulfitobacterium hafniense Y51]
gi|89332763|dbj|BAE82358.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 127
Score = 72.0 bits (175), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 57/87 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++V GGKW+ +L V++ IR+N +++E+ IT +L L L+ +EL+E+ + +
Sbjct: 19 LDVFGGKWKARILCVLSTNSVIRYNAIRKELGNITDAVLAAMLKELMADELIERTQYNEI 78
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ +G+S++P+L+ I QW +
Sbjct: 79 PPKVEYALTDRGRSVLPILQNICQWSR 105
>gi|83646231|ref|YP_434666.1| predicted transcriptional regulator [Hahella chejuensis KCTC 2396]
gi|83634274|gb|ABC30241.1| predicted transcriptional regulator [Hahella chejuensis KCTC 2396]
Length = 121
Score = 72.0 bits (175), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 60/90 (66%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ + V+GG+W+ +L+ + + +RFNQLKR +GIT MLT L L+++ +VE+
Sbjct: 23 VTTTLNVIGGRWKPVILFHLLENGVVRFNQLKRMTDGITQRMLTNQLKELVSDGIVERKV 82
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ +P HV+Y L+ GK+L P+L ++ +WG
Sbjct: 83 IEVVPPHVEYLLTDYGKTLTPILIEMREWG 112
>gi|56962558|ref|YP_174284.1| hypothetical protein ABC0784 [Bacillus clausii KSM-K16]
gi|56908796|dbj|BAD63323.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 116
Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 58/87 (66%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+E++ GKW+ +L+ + + +RFN+LKR + GIT MLT L L ++++VE+ + +
Sbjct: 13 LEILVGKWKHKILFQLMTHDVMRFNELKRAIPGITQKMLTSQLRELESHDIVERKVYPQI 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y +S GKSL P+L +++WGK
Sbjct: 73 PPKVEYSISEYGKSLQPVLDAMHEWGK 99
>gi|154150624|ref|YP_001404242.1| transcriptional regulator, HxlR family [Candidatus Methanoregula
boonei 6A8]
gi|153999176|gb|ABS55599.1| transcriptional regulator, HxlR family [Candidatus Methanoregula
boonei 6A8]
Length = 125
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW+ +LW + K + +RF+ +++++ GIT +ML + L L+ + ++E+ + +
Sbjct: 16 LSVIGGKWKPIILWFL-KDEPVRFSGIQKKIPGITQMMLAKQLRELVADGMIERTVYPEV 74
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V Y ++ G+S +P+L +N+WG Y
Sbjct: 75 PPRVDYAITDDGRSALPVLVALNEWGNEY 103
>gi|154684999|ref|YP_001420160.1| putative transcriptional regulator [Bacillus amyloliquefaciens
FZB42]
gi|154350850|gb|ABS72929.1| putative transcriptional regulator [Bacillus amyloliquefaciens
FZB42]
Length = 111
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 56/90 (62%)
Query: 2 SQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDF 61
S + ++ GKW L +L V+ Y IR+N+LKR+V GIT ML +SL LI +V++V +
Sbjct: 14 SYALNILAGKWNLKILAVLCSYNDIRYNELKRKVYGITGTMLNQSLKDLIEYGIVQRVQY 73
Query: 62 QTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P V+Y L+ G L P+ +Q+ WG+
Sbjct: 74 NEVPSRVEYSLTRAGLELNPIFEQLLLWGE 103
>gi|88796037|ref|ZP_01111722.1| hypothetical protein MADE_02184 [Alteromonas macleodii 'Deep
ecotype']
gi|88772623|gb|EAR03903.1| hypothetical protein MADE_02184 [Alteromonas macleodii 'Deep
ecotype']
Length = 140
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+E++GGKW+ +LW + ++++RF+QL+R + G+T MLT+ L L + LV + + +
Sbjct: 47 LEIIGGKWKGVILWHLC-HKTLRFSQLRRRLQGVTQKMLTQQLRELERDGLVNRKVYAEV 105
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ G++L P L+Q+ WG+ Y
Sbjct: 106 PPRVEYSLTELGRTLEPTLRQLCDWGRTY 134
>gi|23100260|ref|NP_693727.1| hypothetical protein OB2805 [Oceanobacillus iheyensis HTE831]
gi|22778492|dbj|BAC14761.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 125
Score = 69.7 bits (169), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW++ +LW + K + RFN+LK + IT ML L L ++ +V + + +
Sbjct: 17 LAVIGGKWKMLILWYLGKEGTKRFNELKSLMPNITQRMLVNQLRELESDFIVHREVYPVV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ +GK+LMP+L+ + WGK Y
Sbjct: 77 PPKVEYSLTERGKTLMPILEAMYDWGKDY 105
>gi|46580828|ref|YP_011636.1| transcriptional regulator, putative [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|120601856|ref|YP_966256.1| transcriptional regulator, HxlR family [Desulfovibrio vulgaris
subsp. vulgaris DP4]
gi|46450248|gb|AAS96896.1| transcriptional regulator, putative [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|120562085|gb|ABM27829.1| transcriptional regulator, HxlR family [Desulfovibrio vulgaris
subsp. vulgaris DP4]
Length = 159
Score = 69.7 bits (169), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 57/89 (64%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++V+GGKW+ +LW I + +RF++L+R + IT MLT+ L L + +V + + +
Sbjct: 32 LQVIGGKWKPIILWRIGQDGVLRFSELRRILPNITQKMLTQQLRELEADGMVHREVYPQV 91
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ G++LMP+L+ + WG+ +
Sbjct: 92 PPRVEYSLTELGRTLMPVLEHLILWGRAF 120
>gi|146295749|ref|YP_001179520.1| transcriptional regulator, HxlR family [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409325|gb|ABP66329.1| transcriptional regulator, HxlR family [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 130
Score = 69.3 bits (168), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 55/88 (62%)
Query: 6 EVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLP 65
EV+GGKW+ +LW + +Y ++RF QL+ + IT +LT+ L L + LVE+ + +P
Sbjct: 19 EVIGGKWKPLILWYLGEYGTLRFAQLQHLIPDITHRILTKQLRELEEHGLVERKVYPEVP 78
Query: 66 LHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ V+Y ++ KGK ++P+L + W Y
Sbjct: 79 IKVEYTITEKGKEVLPILDMMCDWADKY 106
>gi|126699591|ref|YP_001088488.1| putative transcriptional regulator [Clostridium difficile 630]
gi|115251028|emb|CAJ68857.1| putative transcriptional regulator [Clostridium difficile 630]
Length = 118
Score = 69.3 bits (168), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 59/90 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M V+G KWR +LW I K + IR++QLK+EV I+ +L++ L L + L++++ + T+
Sbjct: 28 MTVIGSKWRAIILWHILKQEPIRYSQLKKEVVHISHKILSQELKYLERDGLIKRISYPTI 87
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y + +GKSL +L ++ WGK Y+
Sbjct: 88 PPKVEYLSTKRGKSLESILLELCNWGKQYM 117
>gi|52784398|ref|YP_090227.1| hypothetical protein BLi00585 [Bacillus licheniformis ATCC 14580]
gi|52346900|gb|AAU39534.1| putative protein [Bacillus licheniformis DSM 13]
gi|145902760|gb|AAU22179.2| putative carboxy-lyase [Bacillus licheniformis ATCC 14580]
Length = 111
Score = 68.9 bits (167), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 59/86 (68%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW++ +++++ + Q IRFN+LKR++ IT L+ L L + LV++ ++ +
Sbjct: 22 LSVIGGKWKMVIIYLLAENQPIRFNELKRQIGAITYKTLSSQLKELEADGLVKRKEYPQV 81
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ K +SL+P+L+ + +WG
Sbjct: 82 PPKVEYSLTDKAESLLPVLEGLCEWG 107
>gi|57240872|ref|ZP_00368820.1| Transcriptional regulator, MarR family [Campylobacter lari RM2100]
gi|57018491|gb|EAL55265.1| Transcriptional regulator, MarR family [Campylobacter lari RM2100]
Length = 109
Score = 68.9 bits (167), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 62/87 (71%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GK++++VL+ + +Y+ +R+N+LKR + I+ LT +L L ++L+ + ++ +
Sbjct: 16 LSLISGKYKMSVLYCLFRYEVVRYNELKRYLGNISFKTLTHTLRELENDDLITRKEYPQI 75
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y+LS KG+SL+P+L+ + +WG+
Sbjct: 76 PPKVEYKLSKKGQSLIPILQAMCEWGE 102
>gi|68054885|ref|ZP_00539034.1| Protein of unknown function DUF24 [Exiguobacterium sibiricum
255-15]
gi|68008403|gb|EAM87631.1| Protein of unknown function DUF24 [Exiguobacterium sibiricum
255-15]
Length = 126
Score = 68.9 bits (167), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 59/90 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+E++ GKW+ ++L + + ++RF++LKR + IT MLT L L N++V + +Q +
Sbjct: 13 LEILTGKWKPSILLELITHDTLRFSELKRNLPNITQKMLTAQLRELELNDIVHREIYQVV 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ GK+L+P+L IN WG+ ++
Sbjct: 73 PPRVEYSLTDYGKTLIPVLNAINAWGEKHV 102
>gi|27380944|ref|NP_772473.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
110]
gi|27354110|dbj|BAC51098.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
110]
Length = 126
Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+ + +GGKW+L +L+ + ++RF L+R + GIT MLT L L + LV + F
Sbjct: 26 RAIHALGGKWKLEILFALMN-GAVRFGALRRSIGGITQHMLTTQLRELEQDGLVSRTVFA 84
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
PL V+Y+L+ L+P K+I W +LY
Sbjct: 85 EKPLRVEYELTDAAYGLLPAFKEILSWSRLY 115
>gi|118444543|ref|YP_879205.1| transcriptional regulator [Clostridium novyi NT]
gi|118134999|gb|ABK62043.1| transcriptional regulator [Clostridium novyi NT]
Length = 127
Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
M M+V+GGKW+ +LW + + +++RF+QLKR ++GIT MLT+ L L + LV +
Sbjct: 13 MELTMDVIGGKWKTVILWHL-RNRTLRFSQLKRRLDGITQKMLTQQLRELERDGLVNRTV 71
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ +P V+Y L+ GK ++P+L I WG Y
Sbjct: 72 YPQVPPKVEYSLTDYGKHIIPVLYSIYSWGINY 104
>gi|145953997|ref|ZP_01803004.1| hypothetical protein CdifQ_04002287 [Clostridium difficile
QCD-32g58]
Length = 118
Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 59/90 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M V+G KWR +LW I K + IR++QLK++V I+ +L++ L L + L++++ + T+
Sbjct: 28 MTVIGSKWRAIILWHILKQEPIRYSQLKKDVVHISHKILSQELKYLERDGLIKRISYPTI 87
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y + +GKSL +L ++ WGK Y+
Sbjct: 88 PPKVEYLSTKRGKSLESILLELCNWGKQYM 117
>gi|52081158|ref|YP_079949.1| HxlR [Bacillus licheniformis ATCC 14580]
gi|52786541|ref|YP_092370.1| HxlR [Bacillus licheniformis ATCC 14580]
gi|52004369|gb|AAU24311.1| DNA-binding protein, transcriptional regulator HxlR [Bacillus
licheniformis ATCC 14580]
gi|52349043|gb|AAU41677.1| HxlR [Bacillus licheniformis DSM 13]
Length = 115
Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 57/90 (63%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++GGKW++ +LW + K + RF +LK + GIT ML L L + +V + + +
Sbjct: 17 LNIIGGKWKMLILWFLGKEGTKRFGELKALMPGITQRMLVNQLRELEEDHIVHREVYPVV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ +G+SLMP+L+ + +WGK Y+
Sbjct: 77 PPKVEYSLTKQGESLMPILEAMYEWGKNYI 106
>gi|111221899|ref|YP_712693.1| Putative MarR family transcriptional regulator [Frankia alni
ACN14a]
gi|111149431|emb|CAJ61123.1| Putative MarR family transcriptional regulator [Frankia alni
ACN14a]
Length = 125
Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 56/87 (64%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
MEVVG KW +L + + +RF Q++R V GIT MLT+ L L + +V++ +
Sbjct: 24 MEVVGAKWVPVILAHLKENDHLRFAQIRRLVPGITEKMLTQRLRELESIRIVDRTLVSST 83
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P HV+Y+L+++G+SL P+L+ + WG+
Sbjct: 84 PPHVEYRLTAEGRSLTPVLQAMYDWGR 110
>gi|68229246|ref|ZP_00568443.1| Protein of unknown function DUF24 [Frankia sp. EAN1pec]
gi|68203202|gb|EAN17377.1| Protein of unknown function DUF24 [Frankia sp. EAN1pec]
Length = 129
Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 56/87 (64%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++V+GGKW VL + ++ +RF QL+R + IT ML + L L +V+++ T
Sbjct: 26 VDVIGGKWTPVVLAHLKEHDRLRFAQLRRLIPDITEKMLAQRLRELEAIRIVDRIPVSTA 85
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P HV+Y L+++G+SL P+L+ + +WG+
Sbjct: 86 PPHVEYALTAQGRSLGPVLQAMWEWGR 112
>gi|19705209|ref|NP_602704.1| Transcriptional regulator, MarR family [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|19713156|gb|AAL94003.1| Transcriptional regulator, MarR family [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 148
Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+++VGGKW+ +L+ IN R ++LKR + I MLTR L L + L+E+ + +
Sbjct: 44 LDIVGGKWKPIILYYININSVARHSELKRFIPSINERMLTRQLRELEEDNLIERKVYPVV 103
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y+L+ GKSL+P+LK + WGK Y
Sbjct: 104 PPKVEYKLTEYGKSLIPILKSLVLWGKDY 132
>gi|34762519|ref|ZP_00143516.1| Transcriptional regulator, MarR family [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27887797|gb|EAA24868.1| Transcriptional regulator, MarR family [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 153
Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+++VGGKW+ +L+ IN R ++LKR + I MLTR L L + L+E+ + +
Sbjct: 49 LDIVGGKWKPIILYYININSVARHSELKRFIPSINERMLTRQLRELEEDNLIERKVYPVV 108
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y+L+ GKSL+P+LK + WGK Y
Sbjct: 109 PPKVEYKLTEYGKSLIPILKSLVLWGKDY 137
>gi|89098840|ref|ZP_01171721.1| HxlR [Bacillus sp. NRRL B-14911]
gi|89086516|gb|EAR65636.1| HxlR [Bacillus sp. NRRL B-14911]
Length = 121
Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 55/90 (61%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW++ +LW + K + RF +LK + GIT ML L L + +V + + +
Sbjct: 17 LSVIGGKWKMIILWHLGKEGTKRFGELKALIPGITQRMLVNQLRELEEDAIVHREVYPVV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ +G++LMP+L + WGK Y+
Sbjct: 77 PPKVEYSLTEQGRTLMPILDSMYSWGKNYM 106
>gi|52079026|ref|YP_077817.1| Pyridoxal-dependent decarboxylase [Bacillus licheniformis ATCC
14580]
Length = 133
Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 59/86 (68%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW++ +++++ + Q IRFN+LKR++ IT L+ L L + LV++ ++ +
Sbjct: 44 LSVIGGKWKMVIIYLLAENQPIRFNELKRQIGAITYKTLSSQLKELEADGLVKRKEYPQV 103
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ K +SL+P+L+ + +WG
Sbjct: 104 PPKVEYSLTDKAESLLPVLEGLCEWG 129
>gi|154497753|ref|ZP_02036131.1| hypothetical protein BACCAP_01731 [Bacteroides capillosus ATCC
29799]
gi|150273251|gb|EDN00396.1| hypothetical protein BACCAP_01731 [Bacteroides capillosus ATCC
29799]
Length = 115
Score = 67.4 bits (163), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 59/90 (65%)
Query: 2 SQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDF 61
S + ++ GK+++ +L+ + + +RFN++K+ + GI+ L+ +L L ++LV + ++
Sbjct: 22 SYTLSLISGKYKMTILYTLMCFGVVRFNEMKKYIGGISYKTLSSTLKELEADQLVHREEY 81
Query: 62 QTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P V+Y L+ +GKSL+P+L Q+ WG+
Sbjct: 82 PQIPPKVEYSLTERGKSLIPILDQMCDWGE 111
>gi|148323562|gb|EDK88812.1| MarR family transcriptional regulator [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 153
Score = 67.4 bits (163), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+++VGGKW+ +L+ IN R ++LKR + I MLTR L L + L+E+ + +
Sbjct: 49 LDIVGGKWKPIILYYININSVARHSELKRFIPSINERMLTRQLRELEEDNLIERKVYPVV 108
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y+L+ GKSL+P+LK + WGK Y
Sbjct: 109 PPKVEYKLTEYGKSLIPILKSLVLWGKDY 137
>gi|16077594|ref|NP_388408.1| hypothetical protein BSU05270 [Bacillus subtilis subsp. subtilis
str. 168]
gi|6226433|sp|O31494|YDZF_BACSU Uncharacterized HTH-type transcriptional regulator ydzF
gi|2632827|emb|CAB12334.1| ydzF [Bacillus subtilis subsp. subtilis str. 168]
Length = 109
Score = 67.4 bits (163), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 56/86 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++GGKW++ +L+ + +++R+ +LKR + IT ML+ L L T+ L+ + +
Sbjct: 16 LSLIGGKWKMRILYELGCEKTMRYGELKRAMPFITHKMLSAQLKELQTDGLIHRSEVSHT 75
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
PL V+Y LS +G+SL PL+ ++ +WG
Sbjct: 76 PLKVEYSLSDRGRSLYPLIDEMCKWG 101
>gi|29827219|ref|NP_821853.1| transcriptional regulator [Streptomyces avermitilis MA-4680]
gi|29604317|dbj|BAC68388.1| putative transcriptional regulator [Streptomyces avermitilis
MA-4680]
Length = 120
Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 54/91 (59%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ VMEV+GGKW++ +LW +++ RF +L+R + GIT +L+ L + + +V +V
Sbjct: 17 IDTVMEVIGGKWKVLILWALHERPHCRFGELRRLLPGITEKVLSSHLREMEADGVVHRVS 76
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+ +P V+Y L+ G L L+ + WG+
Sbjct: 77 YDEVPPRVEYSLTEDGTRLNDALQPLAAWGR 107
>gi|56963192|ref|YP_174923.1| transcriptional regulator [Bacillus clausii KSM-K16]
gi|56909435|dbj|BAD63962.1| transcriptional regulator [Bacillus clausii KSM-K16]
Length = 113
Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 61/86 (70%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW++ +++++ + +++RFN+LKR++ IT L+ L L + +V++ ++ +
Sbjct: 22 LSVIGGKWKMVIIYLLAENETVRFNELKRQIGTITYKTLSSQLKELEADGMVKRKEYPQI 81
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ K ++L+P+L+++ +WG
Sbjct: 82 PPKVEYSLTEKAETLLPVLEELCEWG 107
>gi|156868810|gb|EDO62182.1| hypothetical protein CLOLEP_01043 [Clostridium leptum DSM 753]
Length = 139
Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 8 VGGKWRLNVLWVINKYQS---IRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
VGGKW+L +LW + + +R+ LK ++ GIT +M ++SL L L+++ FQ +
Sbjct: 47 VGGKWKLRILWGLGQSSESGGLRYGDLKEKIPGITDMMFSQSLKDLTAQGLIQRTQFQEI 106
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ +G SL+P++ + W
Sbjct: 107 PPRVEYALTPEGSSLLPVIAALYDWA 132
>gi|150018311|ref|YP_001310565.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149904776|gb|ABR35609.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 106
Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 62/87 (71%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++ GKW+L ++WVI++ +RFN+L+R+V+GI+++ML+++L L + LV + + +
Sbjct: 10 LKIINGKWKLLIIWVISQNGIVRFNELQRKVDGISSLMLSKNLKELEEDSLVIRHQYNEI 69
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y+LS + L+ L+ + +WG+
Sbjct: 70 PPRVEYELSELSQKLIVALQHLGEWGE 96
>gi|125988103|dbj|BAF46969.1| putative transcriptional regulator [Streptomyces griseus]
Length = 167
Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+V+GGKW++ +LW +N+ ++ RF +L+R V G+T +L+ L L + +V + + +
Sbjct: 18 MDVIGGKWKVLILWALNE-RTCRFGELRRAVTGVTEKVLSSHLKELEDDGIVHREVYAEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ G SL L+ + QWG+
Sbjct: 77 PPRVEYSLTPLGLSLNAALEPLGQWGR 103
>gi|15603336|ref|NP_246410.1| hypothetical protein PM1471 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721853|gb|AAK03555.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 119
Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 5 MEVVGGKWRLNVL-WVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
+ ++GGKW++ +L W+ +IRFN+LKR + I+ L+ +L L + LV + ++
Sbjct: 26 LSLIGGKWKMMILYWLFTYPPAIRFNELKRYLGSISFKTLSTTLKELEKDGLVHREEYPQ 85
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P V+Y L+++G+SLMP+L+ + +WG+
Sbjct: 86 IPPKVEYSLTARGQSLMPVLRAMCEWGR 113
>gi|149276979|ref|ZP_01883122.1| hypothetical protein PBAL39_16404 [Pedobacter sp. BAL39]
gi|149232648|gb|EDM38024.1| hypothetical protein PBAL39_16404 [Pedobacter sp. BAL39]
Length = 123
Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 53/83 (63%)
Query: 8 VGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPLH 67
+GGK++ +LW +N+Y+ IRF +L R + +TT MLT++L L ++L+ + + +P
Sbjct: 23 IGGKYKGRILWSLNEYKVIRFGELGRVLADVTTKMLTQTLRELEKDDLIVRKVYHQVPPM 82
Query: 68 VKYQLSSKGKSLMPLLKQINQWG 90
V+Y LS G L+P + + +WG
Sbjct: 83 VEYSLSETGMELIPFITHLKEWG 105
>gi|39995289|ref|NP_951240.1| hypothetical protein GSU0178 [Geobacter sulfurreducens PCA]
gi|39982051|gb|AAR33513.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
Length = 114
Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ VVGGKW+ ++LW + + Q++RF+ L+R+ + T MLT+ L L T+ LV + + +
Sbjct: 24 LAVVGGKWKASILWHLAQ-QTMRFSDLQRQFSDTTRKMLTQQLRELETDGLVHREVYPQV 82
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ KG S+ P+L+Q+ W + +L
Sbjct: 83 PPKVEYSLTPKGMSIYPILQQMCSWAREHL 112
>gi|15613572|ref|NP_241875.1| hypothetical protein BH1009 [Bacillus halodurans C-125]
gi|10173624|dbj|BAB04728.1| BH1009 [Bacillus halodurans C-125]
Length = 115
Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 57/90 (63%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + + VV GKW +L+ + + +RF +L+R + GIT MLT L L + ++E+
Sbjct: 8 VEKTLAVVSGKWTSMILYHLYTNEKLRFGELRRALPGITQKMLTSDLRELEKHRIIERKV 67
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ +P V+Y ++ GK+L+PLL+Q+++WG
Sbjct: 68 YPQVPPKVEYCITDHGKTLLPLLEQMDEWG 97
>gi|28379508|ref|NP_786400.1| transcription regulator (putative) [Lactobacillus plantarum WCFS1]
gi|28272348|emb|CAD65262.1| transcription regulator (putative) [Lactobacillus plantarum WCFS1]
Length = 121
Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 55/86 (63%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+++ GKW++ +L+ + + + RF L+ + ++ L L L +EL+E+ DF+T
Sbjct: 20 MQLIRGKWKIMILFELAEVKVSRFADLQHHIQAVSHKTLASQLKELEQDELIERHDFKTA 79
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
HV+Y+L++KG+SL+P+L I WG
Sbjct: 80 QPHVEYRLTAKGQSLIPILDAICTWG 105
>gi|15679289|ref|NP_276406.1| hypothetical protein MTH1285 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|6226419|sp|O27346|Y1285_METTH Uncharacterized HTH-type transcriptional regulator MTH_1285
gi|2622393|gb|AAB85767.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 131
Score = 66.2 bits (160), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 8 VGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPLH 67
+GGKW+ VL + K +RF+++ R + IT MLTR+L L ++ L+ + + +P
Sbjct: 35 IGGKWKSLVLCTL-KDGKLRFSEINRRIPKITQRMLTRTLRELESSGLINREVYPEVPPR 93
Query: 68 VKYQLSSKGKSLMPLLKQINQWGKLY 93
V+Y L+ KGKS++P+L + +WGK+Y
Sbjct: 94 VEYCLTEKGKSVIPILDALCEWGKMY 119
>gi|126699280|ref|YP_001088177.1| putative transcriptional regulator [Clostridium difficile 630]
gi|145954539|ref|ZP_01803544.1| hypothetical protein CdifQ_04001930 [Clostridium difficile
QCD-32g58]
gi|115250717|emb|CAJ68541.1| putative transcriptional regulator [Clostridium difficile 630]
Length = 110
Score = 66.2 bits (160), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 59/90 (65%)
Query: 2 SQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDF 61
S + ++ GK+++ +L+ + +++ +R+N LKR +N I+ L+ SL L + L+ + ++
Sbjct: 17 SYTLSLISGKYKMIILYCLVEFEVVRYNALKRYINTISYKTLSLSLKELEADNLIIRTEY 76
Query: 62 QTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P V+Y LS +GKSL+P+L + +WG+
Sbjct: 77 PQIPPKVEYSLSERGKSLIPILDAMCEWGE 106
>gi|154175007|ref|YP_001409160.1| putative transcriptional regulator superfamily [Campylobacter
curvus 525.92]
gi|153793163|gb|EAT99519.2| putative transcriptional regulator superfamily [Campylobacter
curvus 525.92]
Length = 112
Score = 65.9 bits (159), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
MS + V+ GKW+L +L +I+ + +RFN+LKR + ITT LT L L +V++V
Sbjct: 13 MSLGINVLSGKWKLQILSLIHAKKVVRFNELKRNLGCITTKTLTDQLRELEAQGVVQRVV 72
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ +P V+Y LS G L +LK++ +WGK Y
Sbjct: 73 YAQVPPKVEYSLSPIGAQLEKVLKELCEWGKEY 105
>gi|150018759|ref|YP_001311013.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149905224|gb|ABR36057.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 118
Score = 65.9 bits (159), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
M ++++GGKW+ ++W + K +++RFN+LKR + IT MLT+ L L + L+ ++
Sbjct: 13 MELTLDIIGGKWKPIIIWQLGK-RTMRFNELKRSLPNITQKMLTQQLRALEDDGLINRIA 71
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ +P V+Y L++ G+SL+P+L + W Y
Sbjct: 72 YNQVPPKVEYSLTNYGRSLLPILADLCDWAIDY 104
>gi|148379498|ref|YP_001254039.1| transcriptional regulator [Clostridium botulinum A str. ATCC 3502]
gi|153931759|ref|YP_001383875.1| putative transcriptional regulator [Clostridium botulinum A str.
ATCC 19397]
gi|153937585|ref|YP_001387425.1| putative transcriptional regulator [Clostridium botulinum A str.
Hall]
gi|153940011|ref|YP_001390873.1| putative transcriptional regulator [Clostridium botulinum F str.
Langeland]
gi|148288982|emb|CAL83070.1| putative transcriptional regulator [Clostridium botulinum A str.
ATCC 3502]
gi|152927803|gb|ABS33303.1| putative transcriptional regulator [Clostridium botulinum A str.
ATCC 19397]
gi|152933499|gb|ABS38998.1| putative transcriptional regulator [Clostridium botulinum A str.
Hall]
gi|152935907|gb|ABS41405.1| putative transcriptional regulator [Clostridium botulinum F str.
Langeland]
Length = 117
Score = 65.5 bits (158), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++GGKW+ ++W + + RFN+LK+ + IT MLT+ L L + LV++ + +
Sbjct: 23 IDLIGGKWKPLIIWHLGTKGTQRFNELKKLIPKITQKMLTQQLRELEADNLVDRKVYAQV 82
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ GKSLMP+L + +WG+ Y
Sbjct: 83 PPKVEYSLTDLGKSLMPILSMMCKWGEDY 111
>gi|148925699|ref|ZP_01809387.1| like protein of BLC protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845709|gb|EDK22800.1| like protein of BLC protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 261
Score = 65.5 bits (158), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 62/87 (71%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GK+++++L+ + +Y+ +R+N+LKR ++ I+ LT +L L + L+ + ++ +
Sbjct: 19 LALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNTLRELENDGLIIRKEYAQI 78
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y LS +G+SL+P+L+ +++WGK
Sbjct: 79 PPKVEYSLSKRGQSLIPILQAMSKWGK 105
>gi|28210228|ref|NP_781172.1| hypothetical protein CTC00480 [Clostridium tetani E88]
gi|28202664|gb|AAO35109.1| conserved protein [Clostridium tetani E88]
Length = 175
Score = 65.5 bits (158), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 6 EVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLP 65
+++GGKWR+ +LW + K +S+RF QLKR + GI+ +L++ L L L++K + P
Sbjct: 51 DILGGKWRIMILWYLRK-KSLRFGQLKRSLKGISEKVLSQELKQLTELGLIDKKVYYQKP 109
Query: 66 LHVKYQLSSKGKSLMPLLKQINQWGKLY 93
L V+Y L++ G++ +P L I +WG Y
Sbjct: 110 LKVEYSLTNYGRTFLPTLYSIFEWGAHY 137
>gi|86356672|ref|YP_468564.1| putative transcriptional regulator protein [Rhizobium etli CFN 42]
gi|86280774|gb|ABC89837.1| putative transcriptional regulator protein [Rhizobium etli CFN 42]
Length = 131
Score = 65.5 bits (158), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ Q+++ VG KW + V+ V+++ +RFNQ+ RE+ G++ MLT +L L + LV +
Sbjct: 24 LGQILDRVGDKWTIMVVGVLSR-GPLRFNQMMREIGGVSHRMLTLTLRSLERDGLVSRTA 82
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ T+P V+Y L+ G+SL+ L+ ++ W Y
Sbjct: 83 YATIPPKVEYALTDAGRSLIEPLRVLSDWAIDY 115
>gi|87118745|ref|ZP_01074644.1| hypothetical protein MED121_16999 [Marinomonas sp. MED121]
gi|86166379|gb|EAQ67645.1| hypothetical protein MED121_16999 [Marinomonas sp. MED121]
Length = 164
Score = 65.5 bits (158), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 1 MSQVMEVVGGKWRLNVLWVI----NKYQSIRFNQLKREVNGITTIMLTRSLDILITNELV 56
+ + +E++GGKW+ +L+ + N+ SIRFN+L+R + IT MLT+ L L L+
Sbjct: 59 VERALEIIGGKWKGAILYHLLDSSNQGGSIRFNELRRIMPNITQRMLTKQLRELAETSLI 118
Query: 57 EKVDFQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ + +P V+Y ++ GK+L P++ + WG +L
Sbjct: 119 SRTVYPEVPPRVEYAMTDYGKTLAPVIDSLRAWGISHL 156
>gi|126653914|ref|ZP_01725758.1| transcriptional regulator [Bacillus sp. B14905]
gi|126589574|gb|EAZ83714.1| transcriptional regulator [Bacillus sp. B14905]
Length = 111
Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 58/86 (67%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++GGKW++ +++ ++ +R+ +LKR++ IT ML+ L L + +V + ++ +
Sbjct: 21 LSLIGGKWKMKIMYELSSDTVLRYGELKRQIPAITHKMLSSQLRELEDSGIVHRKEYPQI 80
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ KGKSLMP+L+++ +WG
Sbjct: 81 PPKVEYSLTLKGKSLMPILEEMCKWG 106
>gi|89208638|ref|ZP_01187134.1| Protein of unknown function DUF24 [Bacillus weihenstephanensis
KBAB4]
gi|89153442|gb|EAR73515.1| Protein of unknown function DUF24 [Bacillus weihenstephanensis
KBAB4]
Length = 127
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 58/91 (63%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ + G+W++ +LW ++K + IRFN+L R + GI+ +LTR L L +ELV +
Sbjct: 22 LTVTQNAIAGRWKIVILWHLSKNEIIRFNELLRMLPGISKGILTRQLRELEEDELVHREV 81
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
++ +P V+Y L+ +G+ +P+L+ + WGK
Sbjct: 82 YKVVPPKVEYSLTEQGEKFIPVLEAMQIWGK 112
>gi|148545080|ref|YP_001272450.1| transcriptional regulator, HxlR family [Lactobacillus reuteri F275]
gi|148532114|gb|ABQ84113.1| transcriptional regulator, HxlR family [Lactobacillus reuteri F275]
Length = 122
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 58/93 (62%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ ++++ GKW+ +++ I+KY+ RF++L++ + + ML L L +++K
Sbjct: 27 IENTLKLINGKWKSVIIYQISKYEPCRFSELQKLIPDCSKRMLALQLKDLEEASIIQKRV 86
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ T+P +Y L+ GKSL+P+++ INQWGK Y
Sbjct: 87 YSTVPPKTEYSLTEVGKSLVPIIRSINQWGKKY 119
>gi|95929022|ref|ZP_01311767.1| transcriptional regulator, HxlR family [Desulfuromonas acetoxidans
DSM 684]
gi|95134923|gb|EAT16577.1| transcriptional regulator, HxlR family [Desulfuromonas acetoxidans
DSM 684]
Length = 124
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++V+GGKW+ +LW + K++++RF+QL+R + IT MLT+ L L + LV + + +
Sbjct: 21 LDVIGGKWKSLILWHL-KHKTLRFSQLQRLLPRITQKMLTQQLRDLERDGLVFRQVYPEV 79
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ G S++P+L Q+ +WG +
Sbjct: 80 PPRVEYSLTELGCSVVPILDQMYEWGSCF 108
>gi|111222571|ref|YP_713365.1| Putative regulatory protein [Frankia alni ACN14a]
gi|111150103|emb|CAJ61798.1| Putative regulatory protein [Frankia alni ACN14a]
Length = 125
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 53/87 (60%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+VV GKW+ VLW +N + + RF +L+R + G++ ML + L + + L+ + ++ +
Sbjct: 22 MDVVSGKWKSLVLWELNNHGTRRFGELRRGLPGVSEKMLIQHLREMEADGLIHREVYREV 81
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ G SL L+ + +WGK
Sbjct: 82 PPRVEYSLTEHGTSLNEALRSLGEWGK 108
>gi|92088423|ref|ZP_01273385.1| Helix-turn-helix, HxlR type [Lactobacillus reuteri 100-23]
gi|91804780|gb|EAS89617.1| Helix-turn-helix, HxlR type [Lactobacillus reuteri 100-23]
Length = 103
Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 58/93 (62%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ ++++ GKW+ +++ I+KY+ RF++L++ + + ML L L +++K
Sbjct: 8 IENTLKLINGKWKSVIIYQISKYEPCRFSELQKLIPDCSKRMLALQLKDLEEARIIQKRV 67
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ T+P +Y L+ GKSL+P+++ INQWGK Y
Sbjct: 68 YSTVPPKTEYSLTEVGKSLVPIIRSINQWGKKY 100
>gi|134046172|ref|YP_001097657.1| transcriptional regulator, HxlR family [Methanococcus maripaludis
C5]
gi|132663797|gb|ABO35443.1| transcriptional regulator, HxlR family [Methanococcus maripaludis
C5]
Length = 120
Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+++G KW++ +LW +N+ + RF++LK V GI+ ML + L + + +++K + +
Sbjct: 17 MDIIGKKWKVLILWHLNE-STKRFSELKEVVPGISQKMLAQQLKEMEEDGIIKKTIYPEI 75
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y ++ GK+L PLLK +N W + YL
Sbjct: 76 PPKVEYSVTEFGKTLFPLLKSMNTWAETYL 105
>gi|86741979|ref|YP_482379.1| putative transcriptional regulator [Frankia sp. CcI3]
gi|86568841|gb|ABD12650.1| putative transcriptional regulator [Frankia sp. CcI3]
Length = 119
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 53/87 (60%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+VV GKW+ +LW +N + + RF +L+R + G++ ML + L + + LV + ++ +
Sbjct: 18 MDVVSGKWKSLILWELNNHGTRRFGELRRGLPGVSEKMLIQHLREMEEDALVHREVYRQV 77
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ G SL L+ + +WGK
Sbjct: 78 PPRVEYSLTEHGISLNEALRPLGEWGK 104
>gi|154684833|ref|YP_001419994.1| HxlR [Bacillus amyloliquefaciens FZB42]
gi|42820792|emb|CAE02628.1| transcriptional regulator [Bacillus amyloliquefaciens FZB42]
gi|154350684|gb|ABS72763.1| HxlR [Bacillus amyloliquefaciens FZB42]
Length = 120
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 57/90 (63%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW++ ++W + K + RFN+LK + IT +L L L + +V + + +
Sbjct: 17 LAVIGGKWKMLIMWHLGKEGTKRFNELKALIPDITHKILVNQLRELEQDLIVHREVYPVV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+++G+SLMP+L + +WGK Y+
Sbjct: 77 PPKVEYSLTAQGESLMPILDAMYKWGKDYM 106
>gi|68056146|ref|ZP_00540278.1| Protein of unknown function DUF24 [Exiguobacterium sibiricum
255-15]
gi|68007238|gb|EAM86508.1| Protein of unknown function DUF24 [Exiguobacterium sibiricum
255-15]
Length = 121
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++GGKW++ +LW + K + RF +LK + GIT ML L L + ++ + + +
Sbjct: 17 LSIIGGKWKMLILWHLGKEGTKRFGELKSLMPGITQRMLVNQLRELEDHHIIHREVYPVV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ G SLMP+L + WGK Y
Sbjct: 77 PPKVEYSLTPHGYSLMPILDAMYDWGKDY 105
>gi|15896581|ref|NP_349930.1| Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
gi|15026420|gb|AAK81270.1|AE007831_2 Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
Length = 106
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 56/86 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GKW+L +++++ + R+ +KR ++GIT ML+ L L + ++ + ++ +
Sbjct: 17 LSIISGKWKLKIIYLLACLGTTRYGVIKRSIDGITHKMLSSQLRDLESKNIISRKEYPQI 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ KG+SL+PL+K + +WG
Sbjct: 77 PPKVEYSLTEKGESLIPLIKDMCEWG 102
>gi|86153121|ref|ZP_01071326.1| transcriptional regulator, MarR family [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|85844006|gb|EAQ61216.1| transcriptional regulator, MarR family [Campylobacter jejuni subsp.
jejuni HB93-13]
Length = 113
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 61/87 (70%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GK+++++L+ + +Y+ +R+N+LKR ++ I+ LT +L L + L+ + ++ +
Sbjct: 19 LALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNTLRELENDGLIIRKEYAQI 78
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y LS +G+SL+P+L+ + +WG+
Sbjct: 79 PPKVEYNLSKRGQSLIPILQAMCKWGE 105
>gi|116873729|ref|YP_850510.1| hypothetical protein lwe2313 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742607|emb|CAK21731.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 109
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ +E++G KW+ ++ + + R +LK ++GI+ +LT SL +I +++VE++D
Sbjct: 12 VATTVEIIGSKWKTLIIRDLMT-GAKRNTELKHSLHGISQKVLTESLKSMIDDKIVERID 70
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
F+ P HV+YQL+ G +L+P+++ + +WG+ Y
Sbjct: 71 FKKNPPHVEYQLTELGNTLLPVIEAMKEWGQFY 103
>gi|89206479|ref|ZP_01185037.1| Protein of unknown function DUF24 [Bacillus weihenstephanensis
KBAB4]
gi|89155600|gb|EAR75610.1| Protein of unknown function DUF24 [Bacillus weihenstephanensis
KBAB4]
Length = 107
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ ++V+GGKW++++L V+ + +R N++KRE+ IT +LT+ L L + ++ +
Sbjct: 9 IATTLDVIGGKWKIHILCVLADGK-MRTNEIKREIPNITQKVLTQQLRQLEADGIIHRTV 67
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+Q +P V+Y +S GKSLM ++ ++ +WGK
Sbjct: 68 YQEVPPKVEYTISEHGKSLMQIMDELFEWGK 98
>gi|148323312|gb|EDK88562.1| possible transcriptional regulator [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 112
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GKW+L +LW I + IRFN+LK+ + ITT LT L L +++++ + +
Sbjct: 17 INILSGKWKLKILWNIQRKNIIRFNELKKLLGSITTKTLTNQLRELEEQKIIKRNVYPEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ G+S++P+LK + +WGK Y
Sbjct: 77 PPKVEYSLTELGESIIPVLKMLCEWGKDY 105
>gi|68231750|ref|ZP_00570912.1| Protein of unknown function DUF24 [Frankia sp. EAN1pec]
gi|68200619|gb|EAN14829.1| Protein of unknown function DUF24 [Frankia sp. EAN1pec]
Length = 140
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 53/90 (58%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
M M+VV GKW+ +LW +N + + RF +L+R + G++ ML + L + + LV +
Sbjct: 14 MDAGMDVVSGKWKSLILWELNNHGTRRFGELRRGLPGVSEKMLIQHLREMEEDGLVHREV 73
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
++ +P V+Y L+ G SL L+ + +WG
Sbjct: 74 YREVPPRVEYSLTEHGTSLNEALRLLGEWG 103
>gi|15613218|ref|NP_241521.1| hypothetical protein BH0655 [Bacillus halodurans C-125]
gi|6226432|sp|Q9Z9W1|Y655_BACHD Uncharacterized HTH-type transcriptional regulator BH0655
gi|4512356|dbj|BAA75321.1| similar to B.subtilis ydzF gene(54%-identity) [Bacillus halodurans]
gi|10173269|dbj|BAB04374.1| BH0655 [Bacillus halodurans C-125]
Length = 113
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 58/86 (67%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++GGKW++ +++++ + Q IRF +LKR++ IT L+ L L + LV++ ++ +
Sbjct: 22 LSLIGGKWKMVIIYLLAEDQPIRFKELKRQIGTITYKTLSSQLKELEADGLVKRKEYPQV 81
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ K +L+P+L+++ +WG
Sbjct: 82 PPKVEYSLTDKAGTLLPILEELCEWG 107
>gi|86141420|ref|ZP_01059966.1| hypothetical protein MED217_05362 [Flavobacterium sp. MED217]
gi|85831979|gb|EAQ50434.1| hypothetical protein MED217_05362 [Leeuwenhoekiella blandensis
MED217]
Length = 119
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+V+ GKW+++++ + +Q +RF++L REV GI+ ML+R L L N+L+E+ T
Sbjct: 19 MDVLSGKWKVSIIACLC-FQGMRFSELLREVEGISGRMLSRELKDLEMNKLIERTVVDTK 77
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P+ V Y+++ G SL L I +WG
Sbjct: 78 PVSVFYKITPYGASLKELTDVIAEWG 103
>gi|116334572|ref|YP_796099.1| Predicted transcriptional regulator [Lactobacillus brevis ATCC 367]
gi|116099919|gb|ABJ65068.1| Predicted transcriptional regulator [Lactobacillus brevis ATCC 367]
Length = 120
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 53/90 (58%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+++ GKW++ +L+ +++ RF L+ + ++ LT L L + L+ + DF T
Sbjct: 19 MQLIQGKWKIMILYELDEDDHCRFADLQHHIQAVSHKTLTSQLRELQADGLITRHDFHTA 78
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
HV+Y L+ G+SL+P+L I WG +++
Sbjct: 79 QPHVEYALTPMGQSLIPILDAICTWGTIHI 108
>gi|60681283|ref|YP_211427.1| putative transcriptional regulator [Bacteroides fragilis NCTC 9343]
gi|60492717|emb|CAH07490.1| putative transcriptional regulator [Bacteroides fragilis NCTC 9343]
Length = 123
Score = 63.9 bits (154), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 59/90 (65%)
Query: 2 SQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDF 61
S ++E +G KW L VL +++ + IRFN+L + + I+ ML+ L L+T+ LV + +
Sbjct: 19 SPILEWLGDKWALVVLLKLHENEVIRFNELYKTIPSISEKMLSTVLRSLVTDGLVNRKIY 78
Query: 62 QTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
T+P V+Y +S G++L+P L+Q+ QWG+
Sbjct: 79 PTVPPKVEYYVSEFGETLIPYLEQLKQWGQ 108
>gi|90423746|ref|YP_532116.1| putative transcriptional regulator [Rhodopseudomonas palustris
BisB18]
gi|90105760|gb|ABD87797.1| putative transcriptional regulator [Rhodopseudomonas palustris
BisB18]
Length = 150
Score = 63.9 bits (154), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ V+ VG KW + V+ ++ + + +RFN+LKR + GI+ MLT +L L + LV +
Sbjct: 39 VATVLSRVGDKWSVLVIMMLGE-RPLRFNELKRMIGGISQRMLTLTLRGLERDGLVTRTV 97
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
F T+P V Y+L+ G+ L +K++ QW K +L
Sbjct: 98 FPTVPPRVDYELTELGRGLSAPVKELGQWAKQHL 131
>gi|154497759|ref|ZP_02036137.1| hypothetical protein BACCAP_01737 [Bacteroides capillosus ATCC
29799]
gi|150273257|gb|EDN00402.1| hypothetical protein BACCAP_01737 [Bacteroides capillosus ATCC
29799]
Length = 121
Score = 63.9 bits (154), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 57/94 (60%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ V++++ GKW+L +++ + +RF +LK+ + IT MLT +L L + LV +
Sbjct: 27 VTPVVQMLQGKWKLQIIYELCIQSPMRFGELKKMLKPITNTMLTNALKELEGDGLVHREQ 86
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ +P V+Y L+ KG L+P+ I+QWG Y+
Sbjct: 87 YNEIPPRVEYSLTEKGTDLLPIFYAISQWGMKYI 120
>gi|149276879|ref|ZP_01883022.1| transcriptional regulator, MarR family protein [Pedobacter sp.
BAL39]
gi|149232548|gb|EDM37924.1| transcriptional regulator, MarR family protein [Pedobacter sp.
BAL39]
Length = 127
Score = 63.9 bits (154), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 57/87 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
ME +GGKW+ +LW++ + +++RF++L + ++GIT ML++ L L +++V + +
Sbjct: 36 MEQIGGKWKPVILWLLFQEETMRFSELDKSISGITQKMLSQQLKGLEETGTIKRVSYPVI 95
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ KGKSL +L + +W +
Sbjct: 96 PPKVEYSLTEKGKSLFSILDGLCKWSE 122
>gi|154149562|ref|YP_001403180.1| transcriptional regulator, HxlR family [Candidatus Methanoregula
boonei 6A8]
gi|153998114|gb|ABS54537.1| transcriptional regulator, HxlR family [Candidatus Methanoregula
boonei 6A8]
Length = 126
Score = 63.5 bits (153), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++V+GGKW+ +LW + +RF +L+R + G+ MLT+ L L + ++++ + +
Sbjct: 18 LDVIGGKWKPLILWRLGD-NVMRFGELQRSLPGVNAKMLTKQLRELENDGVIKRTLYPEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y ++ G++L+P+L+ + WG YL
Sbjct: 77 PPRVEYSITDFGRTLIPILEALCTWGATYL 106
>gi|32475968|ref|NP_868962.1| probable cinnamoyl ester hydrolase-putative a transcriptional
regulator [Rhodopirellula baltica SH 1]
gi|32446511|emb|CAD76347.1| probable cinnamoyl ester hydrolase-putative a transcriptional
regulator [Rhodopirellula baltica SH 1]
Length = 128
Score = 63.5 bits (153), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 58/89 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+E++GGKW+ VL+ + +RF+ LKR+V +T MLT+ L L + LV ++ + +
Sbjct: 23 LELIGGKWKGIVLYYLMVDGRLRFSVLKRKVGCVTQRMLTKQLRELEDSGLVNRIVYAEV 82
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y+L+ +G+SL P+L + +WG+ +
Sbjct: 83 PPRVEYELTEEGESLTPVLLTLKKWGEAH 111
>gi|118579542|ref|YP_900792.1| transcriptional regulator, HxlR family [Pelobacter propionicus DSM
2379]
gi|118502252|gb|ABK98734.1| transcriptional regulator, HxlR family [Pelobacter propionicus DSM
2379]
Length = 116
Score = 63.5 bits (153), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW+ VLW + + +++RF QL+R + +T MLT+ L L N L+ + + +
Sbjct: 14 LAVMGGKWKGLVLWHL-RLKTLRFAQLQRRLRTVTQKMLTQQLRELEANGLIHRQIYAEV 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ +G+ ++P+L+ + QWG+ YL
Sbjct: 73 PPRVEYSLTDEGRRVVPILELMCQWGQDYL 102
>gi|15896733|ref|NP_350082.1| Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
gi|15026587|gb|AAK81422.1|AE007846_13 Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
Length = 106
Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 59/86 (68%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+ GKW+L ++W +++ IRF++L+R++NGI+++ML+++L L + LV + + +
Sbjct: 10 LNVINGKWKLLIIWTMSQNGVIRFSELQRKINGISSLMLSKNLKELEKDSLVIRHQYNEI 69
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y+LS + L+ L+ + +WG
Sbjct: 70 PPRVEYELSELSEKLIVALQVLGEWG 95
>gi|92090225|ref|ZP_01275113.1| Helix-turn-helix, HxlR type [Lactobacillus reuteri 100-23]
gi|91803008|gb|EAS87919.1| Helix-turn-helix, HxlR type [Lactobacillus reuteri 100-23]
Length = 122
Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+++G KW++ V+W + +N+LKR + IT IMLT+SL L + L++++ T+
Sbjct: 27 MKIIGSKWKIPVMWYLMLNDGQHYNELKRSIGSITNIMLTKSLRELEEDGLLKRISKGTV 86
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V Y L+ GK L+ + + +WGK
Sbjct: 87 PPSVTYHLTDTGKDLIYTMGDLFEWGK 113
>gi|30021525|ref|NP_833156.1| Transcriptional regulator, MarR family [Bacillus cereus ATCC
14579]
gi|29897080|gb|AAP10357.1| Transcriptional regulator, MarR family [Bacillus cereus ATCC
14579]
Length = 107
Score = 62.8 bits (151), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ ++V+GGKW++++L +++ + +R N++KRE+ IT +LT+ L L + ++ +
Sbjct: 9 IATTLDVIGGKWKVHILCILSDGK-MRTNEIKREIPNITQKVLTQQLRQLEADGIIYRTV 67
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+Q +P V+Y LS GKSLM ++ + +WGK
Sbjct: 68 YQEVPPKVEYTLSEYGKSLMQIMDNLFEWGK 98
>gi|75760480|ref|ZP_00740519.1| Transcriptional regulator, MarR family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74492041|gb|EAO55218.1| Transcriptional regulator, MarR family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 107
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ ++V+GGKW++++L V+ + +R N+++RE+ IT +LT+ L L + ++ +
Sbjct: 9 IATTLDVIGGKWKVHILCVLIDGK-MRTNEIRREIPNITQKVLTQQLRQLEADGIIHRTV 67
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+Q +P V+Y +S GKSLM ++ ++ +WGK
Sbjct: 68 YQEVPPKVEYTISEYGKSLMQIMDELCEWGK 98
>gi|16077416|ref|NP_388229.1| positive regulator of hxlAB expression [Bacillus subtilis subsp.
subtilis str. 168]
gi|6226922|sp|P42406|HXLR_BACSU HTH-type transcriptional activator hxlR
gi|2632633|emb|CAB12141.1| hxlR [Bacillus subtilis subsp. subtilis str. 168]
Length = 120
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 55/90 (61%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW++ +LW + K + RFN+LK + IT +L L + +V + + +
Sbjct: 17 LAVIGGKWKMLILWHLGKEGTKRFNELKTLIPDITQKILVNQLREREQDMIVHREVYPVV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ G+SLMP+L+ + +WGK Y+
Sbjct: 77 PPKVEYSLTPHGESLMPILEAMYEWGKGYM 106
>gi|56965393|ref|YP_177125.1| transcriptional regulator [Bacillus clausii KSM-K16]
gi|56911637|dbj|BAD66164.1| transcriptional regulator [Bacillus clausii KSM-K16]
Length = 113
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 10 GKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPLHVK 69
GKW++ +L I+ + ++RFN+L+R + IT +LT L L L+E+ F V+
Sbjct: 20 GKWKVLILLHIDYHTTLRFNELRRAIPDITQRVLTAHLRELEQEHLIERRVFGEGRPKVE 79
Query: 70 YQLSSKGKSLMPLLKQINQWGKLY 93
Y LS GK+L P+L+Q++ WGK +
Sbjct: 80 YSLSEHGKTLQPILRQLHAWGKAH 103
>gi|83649349|ref|YP_437784.1| predicted transcriptional regulator [Hahella chejuensis KCTC 2396]
gi|83637392|gb|ABC33359.1| predicted transcriptional regulator [Hahella chejuensis KCTC 2396]
Length = 144
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 8 VGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPLH 67
VGGKW+ +LW ++ +RF +L+R V G++ MLT+ L + + L+ K F +P
Sbjct: 50 VGGKWKCLILWHLH-LDKMRFKELERVVPGVSQKMLTQQLKEMERDGLIVKTVFPEVPPK 108
Query: 68 VKYQLSSKGKSLMPLLKQINQWG 90
V+Y+L+ +G S+ P+L+Q++ W
Sbjct: 109 VEYELTERGHSIFPILEQMHGWA 131
>gi|28378094|ref|NP_784986.1| transcription regulator (putative) [Lactobacillus plantarum WCFS1]
gi|28270928|emb|CAD63833.1| transcription regulator (putative) [Lactobacillus plantarum WCFS1]
Length = 121
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+++G KW++ +LW + +N LKR V IT MLT+SL L +L+E+ D +T+
Sbjct: 27 MKIIGSKWKIPILWKLMLEDGQHYNHLKRMVGNITNTMLTKSLRELEEAKLLERHDDKTV 86
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V Y L++ GK L+ ++ + WG+
Sbjct: 87 PPSVTYHLTNLGKELIYTMEGLFDWGQ 113
>gi|116629605|ref|YP_814777.1| Predicted transcriptional regulator [Lactobacillus gasseri ATCC
33323]
gi|116095187|gb|ABJ60339.1| Predicted transcriptional regulator [Lactobacillus gasseri ATCC
33323]
Length = 130
Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 54/86 (62%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+++ GGKW+ +L ++ +S+R+ ++K ++ I+ L SL L ++E+ + +
Sbjct: 22 LDIFGGKWKPRLLCILGHKKSMRYREIKDQMENISDAALADSLKELQQQNIIERKQYNEM 81
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P+ V+Y L++KGK+L+P+L I+ W
Sbjct: 82 PIRVEYSLTNKGKTLLPVLNTISNWA 107
>gi|121535019|ref|ZP_01666837.1| transcriptional regulator, HxlR family [Thermosinus carboxydivorans
Nor1]
gi|121306432|gb|EAX47356.1| transcriptional regulator, HxlR family [Thermosinus carboxydivorans
Nor1]
Length = 121
Score = 62.4 bits (150), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 59/90 (65%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ + V+G KW+ +++ +++ ++R+ +LK+ + GIT ML++ L L + +L+ + +
Sbjct: 13 VTYTLSVLGRKWKWLIIYTLSEEGTLRYGELKKSLPGITHKMLSKQLKELESEQLIYRKE 72
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ +P V+Y L+ KGK+L+P+L + WG
Sbjct: 73 YHQIPPKVEYSLTPKGKTLIPILNLMCDWG 102
>gi|30263379|ref|NP_845756.1| hypothetical protein BA3475 [Bacillus anthracis str. Ames]
gi|47528762|ref|YP_020111.1| hypothetical protein GBAA3475 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186228|ref|YP_029480.1| hypothetical protein BAS3223 [Bacillus anthracis str. Sterne]
gi|49478223|ref|YP_037523.1| possible transcriptional regulator, MarR family [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|30258013|gb|AAP27242.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47503910|gb|AAT32586.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180155|gb|AAT55531.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49329779|gb|AAT60425.1| possible transcriptional regulator, MarR family [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 107
Score = 62.4 bits (150), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ ++V+GGKW++ +L V+ + +R N++KRE+ +T +LT+ L L + ++ +
Sbjct: 9 IATTLDVIGGKWKVYILCVLMDGK-MRTNEIKREIPNLTQKVLTQQLRQLEADGIIHRTV 67
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+Q +P V+Y LS GKSLM ++ ++ +WGK
Sbjct: 68 YQEVPPKVEYTLSEHGKSLMKIMDELFEWGK 98
>gi|149276618|ref|ZP_01882761.1| hypothetical protein PBAL39_14599 [Pedobacter sp. BAL39]
gi|149232287|gb|EDM37663.1| hypothetical protein PBAL39_14599 [Pedobacter sp. BAL39]
Length = 116
Score = 62.4 bits (150), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+V+ GKW+++++ I Y RF+ + +V+GI+ ML++ L L TN+L+ + T
Sbjct: 21 MDVLNGKWKVSIISSICYYNKRRFSDILNDVHGISNKMLSKELKELETNKLINRTVLDTQ 80
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P+ V+YQL+ G +L ++ + +WGK +
Sbjct: 81 PISVQYQLTEYGLTLKTIINNLAEWGKAH 109
>gi|20089231|ref|NP_615306.1| hypothetical protein MA0333 [Methanosarcina acetivorans C2A]
gi|19914108|gb|AAM03786.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 127
Score = 62.4 bits (150), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++V+GGKW+ +LW + + + +RF+ L++ + GI+ MLT+ L L + LV + + +
Sbjct: 19 LDVIGGKWKPLILWQL-RGEKLRFSGLRQNMQGISPKMLTKQLRELEADGLVFREVYPEI 77
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ GK+++P+L+ + +WG YL
Sbjct: 78 PPRVEYSLTEFGKTVIPVLEALCEWGNGYL 107
>gi|42782491|ref|NP_979738.1| hypothetical protein BCE_3438 [Bacillus cereus ATCC 10987]
gi|42738417|gb|AAS42346.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 107
Score = 62.4 bits (150), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ ++V+GGKW++++L V+ + +R N+++RE+ IT +LT+ L L + ++ +
Sbjct: 9 IATTLDVIGGKWKVHILCVLMDGK-MRTNEIRREIPNITQKVLTQQLRQLEADGIIHRTV 67
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+Q +P V+Y +S GKSLM ++ ++ +WGK
Sbjct: 68 YQEVPPKVEYTISEYGKSLMQIMNELFEWGK 98
>gi|56552593|ref|YP_163432.1| hypothetical protein ZMO1697 [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544167|gb|AAV90321.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 114
Score = 62.0 bits (149), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GKW+ +L+ + + +++RFN+L+R IT MLT+ L L NEL+ + + +
Sbjct: 21 LNLIDGKWKGVILYHLFE-KTLRFNELRRRFPDITQRMLTKQLRELEKNELIIRKVYPVI 79
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y LS +G+SL P++ + WG YL
Sbjct: 80 PPKVEYSLSERGRSLEPVIMALKNWGDTYL 109
>gi|52079246|ref|YP_078037.1| hypothetical DNA binding protein [Bacillus licheniformis ATCC
14580]
gi|52784611|ref|YP_090440.1| YdeP [Bacillus licheniformis ATCC 14580]
gi|52002457|gb|AAU22399.1| conserved hypothetical DNA binding protein [Bacillus licheniformis
ATCC 14580]
gi|52347113|gb|AAU39747.1| YdeP [Bacillus licheniformis DSM 13]
Length = 130
Score = 62.0 bits (149), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 5 MEVVGGKWRLNVLW-VINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
++++GGKW+ +L+ +I+ + RFN+L+R + G+T MLT L L + +V + ++
Sbjct: 22 IDIIGGKWKSVILYHLIDDKK--RFNELRRLIPGVTQRMLTLQLRELERDGIVCRTIYKQ 79
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+P V+Y L+ GK+L+P+++Q+ WG Y
Sbjct: 80 VPPKVEYSLTEFGKTLIPIIRQMMNWGTSY 109
>gi|47564547|ref|ZP_00235592.1| transcriptional regulator, MarR family [Bacillus cereus G9241]
gi|47558699|gb|EAL17022.1| transcriptional regulator, MarR family [Bacillus cereus G9241]
Length = 115
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ ++V+GGKW++ +L V+ + +R N++KRE+ +T +LT+ L L + ++ +
Sbjct: 17 IATTLDVIGGKWKVYILCVLMDGK-MRTNEIKREIPNLTQKVLTQQLRQLEADGIIHRTV 75
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+Q +P V+Y LS GKSLM ++ ++ +WGK
Sbjct: 76 YQEVPPKVEYTLSEHGKSLMKIMNELFEWGK 106
>gi|146301727|ref|YP_001196318.1| transcriptional regulator, HxlR family [Flavobacterium johnsoniae
UW101]
gi|146156145|gb|ABQ06999.1| transcriptional regulator, HxlR family [Flavobacterium johnsoniae
UW101]
Length = 125
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 1 MSQVMEVVGGKWRLNVLWVINK--YQSIRFNQLKREVNGITTIMLTRSLDILITNELVEK 58
M ++V+GGKW+L +L + +Q I F +++RE++GI+ ML++ L L TN L+ +
Sbjct: 22 MRDSLDVLGGKWKLMILRFLTNRTHQVIHFKKMQREIDGISAKMLSKELKELETNLLITR 81
Query: 59 VDFQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ T P V Y ++ GKS++P+ + + WG
Sbjct: 82 TEQDTKPATVIYAITEYGKSVLPVTETLVNWG 113
>gi|58038969|ref|YP_190933.1| hypothetical protein GOX0498 [Gluconobacter oxydans 621H]
gi|58001383|gb|AAW60277.1| Hypothetical protein GOX0498 [Gluconobacter oxydans 621H]
Length = 129
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 52/89 (58%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+E+ GGKW+ +L+ + + +RF + + + +T MLT L L + L+ + F +
Sbjct: 21 LELFGGKWKALILYHLFEEPVLRFGEFRHRLPNVTQRMLTNQLRELEADGLLSRTVFPVV 80
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P HV+Y+L+ GK+L P+++ + WG Y
Sbjct: 81 PPHVEYRLTDLGKTLKPVIQALKTWGDQY 109
>gi|118469951|ref|YP_887224.1| transcriptional regulator [Mycobacterium smegmatis str. MC2 155]
gi|118171238|gb|ABK72134.1| transcriptional regulator [Mycobacterium smegmatis str. MC2 155]
Length = 128
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 53/90 (58%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + +VGG+W+ ++W + + R+ QL+ V G++ +L +L L + +VE+ D
Sbjct: 14 LDAALAIVGGRWKFLIVWQLAVQGAQRYGQLRARVEGVSEKVLIGALRDLEADGVVERRD 73
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+T+P HV+Y L+ G L +L+ + +WG
Sbjct: 74 HRTVPPHVEYSLTPSGVELAKVLEPLCRWG 103
>gi|15896187|ref|NP_349536.1| Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
gi|15025985|gb|AAK80876.1|AE007790_7 Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
Length = 112
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
M ++++GGKW++ +LW + K ++RF +L + + IT MLT+ L L L+ +
Sbjct: 13 MELTLDIIGGKWKVLILWHLGK-GTLRFGELMKTLPKITQKMLTQQLRSLEETGLINRFV 71
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ ++P V+Y L+ GKSL+P+L+ + QW Y+
Sbjct: 72 YASVPPKVEYSLTDTGKSLLPILENLRQWALDYI 105
>gi|150017975|ref|YP_001310229.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149904440|gb|ABR35273.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 111
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 59/94 (62%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + ++++G KW++ +L ++ + RFNQL+ +NGI+ MLT+ L + + L+ +
Sbjct: 9 IEETVKLIGHKWKVLILRNLHDDGTQRFNQLENGINGISQKMLTQQLRQMEADGLIIRKV 68
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ +P V+Y LS GKSL P+L +N WG+ Y+
Sbjct: 69 YPEVPPRVEYSLSELGKSLKPVLDSMNIWGENYI 102
>gi|52142113|ref|YP_084716.1| possible transcriptional regulator, MarR family [Bacillus cereus
E33L]
gi|51975582|gb|AAU17132.1| possible transcriptional regulator, MarR family [Bacillus cereus
E33L]
Length = 115
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ ++V+GGKW++++L V+ + +R N+++RE+ IT +LT+ L L + ++ +
Sbjct: 17 IATTLDVIGGKWKVHILCVLMDGK-MRTNEIRREIPNITQKVLTQQLRQLEADGIIHRTV 75
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+Q +P V+Y +S GKSLM ++ ++ +WGK
Sbjct: 76 YQEVPPKVEYTISEYGKSLMQIMNELFEWGK 106
>gi|73668903|ref|YP_304918.1| transcriptional regulator, MarR family [Methanosarcina barkeri str.
Fusaro]
gi|72396065|gb|AAZ70338.1| transcriptional regulator, MarR family [Methanosarcina barkeri str.
Fusaro]
Length = 122
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+EV+GGKW+ +LW + + + +RF+ L++ + GI+ MLT+ L L + L+ + + +
Sbjct: 19 LEVIGGKWKPIILWQL-RTEKLRFSGLQQSMQGISPKMLTKQLRELEEDGLILREVYPEI 77
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ GK+++P+L + +WG YL
Sbjct: 78 PPRVEYSLTEFGKTVLPVLDALCKWGIEYL 107
>gi|68231191|ref|ZP_00570363.1| Protein of unknown function DUF24 [Frankia sp. EAN1pec]
gi|68201148|gb|EAN15348.1| Protein of unknown function DUF24 [Frankia sp. EAN1pec]
Length = 108
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ V+ +G KW + V+ ++ K +S RFN+L R V GI+ MLTR+L L T+ LV +
Sbjct: 2 VTDVLRRIGDKWTVLVIVLLGK-RSYRFNELHRSVEGISQRMLTRTLRGLETDGLVNREV 60
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
F T+P V+Y L+ G+SL+ L + W
Sbjct: 61 FPTVPSSVEYSLTPLGRSLLHPLSALADWA 90
>gi|21227688|ref|NP_633610.1| transcriptional regulator, MarR family [Methanosarcina mazei Go1]
gi|20906082|gb|AAM31282.1| transcriptional regulator, MarR family [Methanosarcina mazei Go1]
Length = 128
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW+ +LW + K + +RF+ L++ + GI+ MLT+ L L L+ + + +
Sbjct: 19 LNVIGGKWKPIILWQL-KTEKLRFSGLQQNMQGISPKMLTKQLRELEDAGLILRKVYPEI 77
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ GK+++P+L + +WG YL
Sbjct: 78 PPRVEYSLTEFGKTVLPVLDALCEWGSKYL 107
>gi|152979731|ref|YP_001345360.1| transcriptional regulator, HxlR family [Actinobacillus succinogenes
130Z]
gi|150841454|gb|ABR75425.1| transcriptional regulator, HxlR family [Actinobacillus succinogenes
130Z]
Length = 112
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 5 MEVVGGKWRLNVL-WVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
+ ++GGK+++ +L W+ ++RFN+L+R++ I+ L++SL L + LV + ++
Sbjct: 22 LSLIGGKYKMVILFWLYLNPPNMRFNELQRKIGKISVKTLSQSLKELENDGLVIRTEYPQ 81
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P V+Y LS K SLMP+L + QWG+
Sbjct: 82 IPPKVEYSLSDKALSLMPILDSLCQWGE 109
>gi|50084628|ref|YP_046138.1| hypothetical protein ACIAD1453 [Acinetobacter sp. ADP1]
gi|49530604|emb|CAG68316.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 138
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 54/88 (61%)
Query: 7 VVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPL 66
++ GKW+ +LW + + +RFN+LKR + +T MLT L L + L+ + + +P
Sbjct: 23 LLDGKWKSLILWNLLTEKILRFNELKRRIPNVTQRMLTNQLRELEQDGLIIRTVYPQVPP 82
Query: 67 HVKYQLSSKGKSLMPLLKQINQWGKLYL 94
V+YQLS+ G++L P+L + +WG ++
Sbjct: 83 KVEYQLSALGQTLKPILVALKEWGDQHI 110
>gi|39936285|ref|NP_948561.1| DUF24, predicted transcriptional regulator, related to MarR family
[Rhodopseudomonas palustris CGA009]
gi|39650140|emb|CAE28663.1| DUF24, predicted transcriptional regulator, related to MarR family
[Rhodopseudomonas palustris CGA009]
Length = 158
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++ GKW+ +L+ + + +RF +L+R + GIT MLT+ L L ++L+ + F +
Sbjct: 47 LDLIDGKWKGVILYHLQDGR-LRFGELRRRMPGITQRMLTKQLRALEDDDLITREVFAEV 105
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y LS G+ L P++ + +WG+
Sbjct: 106 PPRVEYALSETGERLRPVIDALKRWGE 132
>gi|153953370|ref|YP_001394135.1| Transcriptional regulator [Clostridium kluyveri DSM 555]
gi|146346251|gb|EDK32787.1| Transcriptional regulator [Clostridium kluyveri DSM 555]
Length = 133
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+S ++ GKW+L++LW++ K ++ RFN+L++ + I+ +LT+ L L ++LV +
Sbjct: 10 VSVAQNILMGKWKLSILWIL-KDKTRRFNELQKLMTTISRGVLTQQLRELERDKLVNRKV 68
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
++ +P V+Y L+ GKS +P++ QI +WG Y+
Sbjct: 69 YREVPPKVEYSLTEIGKSFIPIMVQIIEWGAEYI 102
>gi|1438847|dbj|BAA06435.1| homologue of hypothetical 17.6 kDa protein in rplI-cpdB
intergenic region of E. coli [Bacillus subtilis]
gi|1805419|dbj|BAA08981.1| yckH [Bacillus subtilis]
Length = 102
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 54/88 (61%)
Query: 7 VVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPL 66
++GGKW++ +LW + K + RFN+LK + IT +L L + +V + + +P
Sbjct: 1 MIGGKWKMLILWHLGKEGTKRFNELKTLIPDITQKILVNQLREREQDMIVHREVYPVVPP 60
Query: 67 HVKYQLSSKGKSLMPLLKQINQWGKLYL 94
V+Y L+ G+SLMP+L+ + +WGK Y+
Sbjct: 61 KVEYSLTPHGESLMPILEAMYEWGKGYM 88
>gi|83950325|ref|ZP_00959058.1| Hypothetical transcriptional regulator [Roseovarius nubinhibens
ISM]
gi|83838224|gb|EAP77520.1| Hypothetical transcriptional regulator [Roseovarius nubinhibens
ISM]
Length = 126
Score = 60.1 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ Q M ++GGKW ++LW + +RFN L R V G + M+T L L T LV +
Sbjct: 25 IEQGMRIIGGKWTGSILWHLQD-GPVRFNDLARMVGGASKKMITERLRQLETQGLVRREV 83
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
T P+ V+Y+++ G+S + L ++ +W +
Sbjct: 84 MATAPVSVQYEITEIGRSALGFLDELRKWSE 114
>gi|119490614|ref|ZP_01623019.1| Predicted transcriptional regulator [Lyngbya sp. PCC 8106]
gi|119453779|gb|EAW34936.1| Predicted transcriptional regulator [Lyngbya sp. PCC 8106]
Length = 109
Score = 60.1 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ G+W+L ++W Q RFN+L+R + GIT MLT+ L + + LV + + +
Sbjct: 19 LSMINGRWKL-LIWRELFSQVKRFNELQRSLTGITQKMLTQHLREMEADGLVNRKVYAEI 77
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ KG+SL PL++Q++ WG
Sbjct: 78 PPKVEYSLTPKGESLQPLIEQMHTWG 103
>gi|153939374|ref|YP_001392715.1| putative transcriptional regulator [Clostridium botulinum F str.
Langeland]
gi|152935270|gb|ABS40768.1| putative transcriptional regulator [Clostridium botulinum F str.
Langeland]
Length = 106
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 59/90 (65%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ +VGGKW++++L+ + + +R++++KR + IT ML+ L L + L+ + ++ +
Sbjct: 16 LSLVGGKWKMHILFWLWHRKVMRYSEIKRVLKNITHKMLSNQLKELQADGLIIRKEYPQV 75
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y+L+ KG SLMP+L + +WG ++
Sbjct: 76 PPKVEYRLTDKGDSLMPVLDAMCKWGHQFV 105
>gi|54027480|ref|YP_121722.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54018988|dbj|BAD60358.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length = 117
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
MS ++VVGGKW+L+++WV+ + RF +++R ++G++ +LT +L L + +V +
Sbjct: 14 MSVAIDVVGGKWKLHLMWVLGEGPR-RFGEIRRLLDGVSEKVLTENLRQLEASGVVCREV 72
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+ +P V+Y L+ G+ L L+ + WG+
Sbjct: 73 YAEIPPRVEYSLTPLGEDLALALRPLEAWGE 103
>gi|150395877|ref|YP_001326344.1| transcriptional regulator, HxlR family [Sinorhizobium medicae
WSM419]
gi|150027392|gb|ABR59509.1| transcriptional regulator, HxlR family [Sinorhizobium medicae
WSM419]
Length = 133
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + + GKW+ +L+ + +RFN+L+R + +T MLTR L L L+ +
Sbjct: 17 VESALSFIDGKWKGVILYHLMSEGILRFNELRRRLPSVTPRMLTRQLRELEEAALLSRTV 76
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
F +P V Y L+++G+SL P++ + WG
Sbjct: 77 FPVVPPRVDYALTARGESLKPVIMALKAWG 106
>gi|134102517|ref|YP_001108178.1| transcriptional regulator, MarR family [Saccharopolyspora erythraea
NRRL 2338]
gi|133915140|emb|CAM05253.1| transcriptional regulator, MarR family [Saccharopolyspora erythraea
NRRL 2338]
Length = 123
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 7 VVGGKWRLNVL-WVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLP 65
VVGGKW+L +L ++++ Q RF +L+R + GIT MLTR L L + +V + +P
Sbjct: 25 VVGGKWKLLILKYLVDGPQ--RFGELRRALPGITQRMLTRQLRELENDGIVSRTVHAEVP 82
Query: 66 LHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+Y+L+ G SL L+ +++WGK Y
Sbjct: 83 PRTEYRLTEIGDSLRALISDLDEWGKWY 110
>gi|15964790|ref|NP_385143.1| hypothetical protein SMc02381 [Sinorhizobium meliloti 1021]
gi|15073968|emb|CAC45609.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 133
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + + GKW+ +L+ + +RFN+L+R + +T MLTR L L L+ +
Sbjct: 17 VESALSFIDGKWKGVILYHLMSEGVLRFNELRRRLPSVTPRMLTRQLRELEEAALLSRTV 76
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
F +P V Y L+++G+SL P++ + WG
Sbjct: 77 FPVVPPRVDYALTARGESLKPVIMALKAWG 106
>gi|15896725|ref|NP_350074.1| Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
gi|15026579|gb|AAK81414.1|AE007846_5 Predicted transcriptional regulator [Clostridium acetobutylicum
ATCC 824]
Length = 108
Score = 59.7 bits (143), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 56/94 (59%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
M + VV GKW+ +LW I K + IR+N+L++ + I L+ L L + L+ +
Sbjct: 13 MRYTISVVEGKWKWIILWKIYKAKVIRYNKLRKSLEPIAHKTLSSQLKELEISNLIHREQ 72
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ +P V+Y L+ +G +L+P+L+ +++WG Y+
Sbjct: 73 YNEVPPKVEYSLTEEGVTLIPILELMSKWGNEYI 106
>gi|92114490|ref|YP_574418.1| putative transcriptional regulator [Chromohalobacter salexigens DSM
3043]
gi|91797580|gb|ABE59719.1| putative transcriptional regulator [Chromohalobacter salexigens DSM
3043]
Length = 121
Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + V+ GKW+ +L+ ++K + R+ +LKR V G++ ML + L L ++ +V++ D
Sbjct: 15 LHATLHVISGKWKPLILFFLDKGPT-RYGELKRSVRGVSDKMLIQQLKELESDGIVQRTD 73
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+ +PL V Y L+ G SL+ ++ + WG+
Sbjct: 74 YGEIPLRVDYSLTPFGASLVQAMEPLCGWGE 104
>gi|21220944|ref|NP_626723.1| hypothetical protein SCO2481 [Streptomyces coelicolor A3(2)]
gi|6759576|emb|CAB69769.1| conserved hypothetical protein SC7A9.20c [Streptomyces coelicolor
A3(2)]
Length = 129
Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+V+GGKW++ +LW + + RF L+R + G+T +L L L + +V + ++ +
Sbjct: 18 MDVIGGKWKVLILWALGE-GMYRFGALRRALPGVTEKVLAAQLRELEADGIVHREEYAEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+++G +L L + WGK ++
Sbjct: 77 PPRVEYSLTARGVALNEALVPLGAWGKAHV 106
>gi|126650578|ref|ZP_01722801.1| hypothetical protein BB14905_08308 [Bacillus sp. B14905]
gi|126592734|gb|EAZ86733.1| hypothetical protein BB14905_08308 [Bacillus sp. B14905]
Length = 127
Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+EV+GGKW+ +L +N + IR N+ +R + GI+ MLT L L L+ + F +
Sbjct: 13 LEVIGGKWKPIILCHLNHHGKIRTNEFRRLIPGISQKMLTNQLRELEQAGLIHRKVFNQV 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+S G + P+L + WG+ ++
Sbjct: 73 PPKVEYSLTSYGHGMEPILNMLCTWGEKHV 102
>gi|46205091|ref|ZP_00049043.2| COG1733: Predicted transcriptional regulators [Magnetospirillum
magnetotacticum MS-1]
Length = 157
Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
Q+++ + KW L + ++++ + +RF +LKRE++GI+ ML+R+L L + +VE+ +
Sbjct: 47 QILDRIADKWSLLAIALLDR-RVMRFTELKREIDGISQRMLSRTLRQLERDGIVERTVYP 105
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQW 89
T+P V Y L+ G+SL K + W
Sbjct: 106 TVPPRVDYALTEMGRSLHATTKALVVW 132
>gi|17544929|ref|NP_518331.1| hypothetical protein RSc0210 [Ralstonia solanacearum GMI1000]
gi|17427219|emb|CAD13738.1| putative transcription regulator protein [Ralstonia solanacearum]
Length = 131
Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
M + ++ GKW+L ++W++++ + RF +L++ + GIT MLT L L + LV +
Sbjct: 17 MRRAFALLSGKWKLEIMWLLSQ-RVYRFGELRKAIPGITQHMLTAQLRELEADGLVSRTV 75
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
F +P V+Y+++ K + L P ++ + W Y
Sbjct: 76 FAEVPPRVEYEITQKARGLGPTMEALTAWWSEY 108
>gi|83589241|ref|YP_429250.1| putative transcriptional regulator [Moorella thermoacetica ATCC
39073]
gi|83572155|gb|ABC18707.1| putative transcriptional regulator [Moorella thermoacetica ATCC
39073]
Length = 123
Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ V ++ GKW++ +LW ++ +++ RFN+L++ + ++ +LT+ L L + LV +
Sbjct: 13 VTAVQRLIAGKWKIVILWHLS-HKTRRFNELQKLLPEVSRGVLTQQLRDLERDGLVHREV 71
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
++ +P V+Y L+ G+S +P+L I +WGK Y+
Sbjct: 72 YKEVPPKVEYSLTEIGQSFIPVLDVIAKWGKYYI 105
>gi|78061098|ref|YP_371006.1| putative transcriptional regulator [Burkholderia sp. 383]
gi|77968983|gb|ABB10362.1| putative transcriptional regulator [Burkholderia sp. 383]
Length = 160
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
Q+++ +G KW L ++ ++ S RFN+LKRE++GI+ MLT +L L + LV + F
Sbjct: 41 QILDRIGDKWSLYIIATLSD-GSRRFNELKREIDGISQRMLTLTLRGLERDGLVTRTVFP 99
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
T+P V Y L+ G +L+ + + W +
Sbjct: 100 TIPPRVDYALTPLGATLLEPVMALVMWAE 128
>gi|149278493|ref|ZP_01884630.1| hypothetical protein PBAL39_20219 [Pedobacter sp. BAL39]
gi|149230863|gb|EDM36245.1| hypothetical protein PBAL39_20219 [Pedobacter sp. BAL39]
Length = 140
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
V EV+ GKW++ +LW I++ +R ++L+R++ +T +L L L +ELV K F
Sbjct: 17 VGEVLYGKWKIRILWFIHQGH-LRPSELQRKIPDVTRRVLNVQLKELEDHELVTKKIFPV 75
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWG 90
LP V+Y L+ GK+L+PL+ I WG
Sbjct: 76 LPPKVEYSLTEFGKTLIPLISAIGLWG 102
>gi|116249215|ref|YP_765056.1| hypothetical protein pRL120551 [Rhizobium leguminosarum bv. viciae
3841]
gi|115253865|emb|CAK12260.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 126
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSI-RFNQLKREVNGITTIMLTRSLDILITNELVEKV 59
M + ++ GKW+L ++W++ +Q I RF +L++ + GIT MLT L L + LV +
Sbjct: 17 MRRAFALLSGKWKLEIMWLL--HQRIHRFGELRKAIPGITQHMLTAQLRELEADGLVSRT 74
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
F +P V+Y+++ K + L P ++ + W Y
Sbjct: 75 IFAEVPPRVEYEITQKARGLGPTMEALTAWWNEY 108
>gi|83747194|ref|ZP_00944237.1| Hypothetical Protein RRSL_02983 [Ralstonia solanacearum UW551]
gi|83726169|gb|EAP73304.1| Hypothetical Protein RRSL_02983 [Ralstonia solanacearum UW551]
Length = 155
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+++++VG KW L V+ ++ S RFN+LKRE+ GI+ MLT +L L + LV + F
Sbjct: 36 EILDLVGDKWTLYVVGTLSG-GSRRFNELKREIEGISQRMLTLTLRGLERDGLVTRTVFP 94
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWG 90
++P V Y L++ G++L+ + + W
Sbjct: 95 SIPPRVDYALTALGRTLLEPVTALIAWA 122
>gi|149180752|ref|ZP_01859255.1| transcriptional regulator, putative [Bacillus sp. SG-1]
gi|148851542|gb|EDL65689.1| transcriptional regulator, putative [Bacillus sp. SG-1]
Length = 110
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 8 VGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPLH 67
+GGKW+ +LW + R+N L+R + GIT ML++ L L L+ + + +P
Sbjct: 24 IGGKWKPVILWHLAYDGIHRYNALRRLLPGITHKMLSQQLKELEQEGLINRKQYNEMPPK 83
Query: 68 VKYQLSSKGKSLMPLLKQINQWG 90
V+Y +S KG +L PLL+++++WG
Sbjct: 84 VEYSISEKGLTLKPLLEEMHKWG 106
>gi|146301067|ref|YP_001195658.1| transcriptional regulator, HxlR family [Flavobacterium johnsoniae
UW101]
gi|146155485|gb|ABQ06339.1| transcriptional regulator, HxlR family [Flavobacterium johnsoniae
UW101]
Length = 123
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+EV+ G+W+L +L ++ + RF ++ +++NGIT ML++ L L N+LV + + T
Sbjct: 29 LEVLSGRWKLPILIALSN-RPKRFKEISKDINGITDKMLSKELKDLEINKLVTRTVYDTF 87
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y + +L ++ +N+WG L+
Sbjct: 88 PPTVEYARTEHSHTLYNVISALNEWGTLH 116
>gi|15792854|ref|NP_282677.1| hypothetical protein Cj1546 [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|86151877|ref|ZP_01070090.1| transcriptional regulator, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|121613166|ref|YP_001001186.1| transcriptional regulator, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|85840985|gb|EAQ58234.1| transcriptional regulator, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|87249837|gb|EAQ72796.1| transcriptional regulator, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|112360845|emb|CAL35646.1| putative transcriptional regulator [Campylobacter jejuni subsp.
jejuni NCTC 11168]
Length = 115
Score = 58.9 bits (141), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 58/83 (69%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GK+++++L+ + +Y+ +R+N+LKR ++ I+ LT +L L + L+ + ++ +
Sbjct: 19 LALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNTLRELENDGLIIRKEYAQI 78
Query: 65 PLHVKYQLSSKGKSLMPLLKQIN 87
P V+Y LS +G+SL+P+L+ ++
Sbjct: 79 PPKVEYSLSKRGQSLIPILQAMS 101
>gi|89890811|ref|ZP_01202320.1| transcriptional regulator, DUF24 family [Flavobacteria bacterium
BBFL7]
gi|89516956|gb|EAS19614.1| transcriptional regulator, DUF24 family [Flavobacteria bacterium
BBFL7]
Length = 111
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 2 SQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDF 61
S M V+GGKW+ +++ + + +R+NQL++E+ +T L+ L L + +VE+ F
Sbjct: 14 SLTMGVIGGKWKTVIIYHLIE-GPLRYNQLRKEMPTVTERTLSLQLKTLEEDGIVERKVF 72
Query: 62 QTLP-LHVKYQLSSKGKSLMPLLKQINQWG 90
T P L V+Y L+ GK+L+PL+K I WG
Sbjct: 73 TTKPPLKVEYSLTDLGKTLIPLVKSIADWG 102
>gi|81428618|ref|YP_395618.1| Putative transcriptional regulator, DUF24 family (related to
MarR/PadR families) [Lactobacillus sakei subsp. sakei
23K]
gi|78610260|emb|CAI55309.1| Putative transcriptional regulator, DUF24 family (related to
MarR/PadR families) [Lactobacillus sakei subsp. sakei
23K]
Length = 121
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 56/90 (62%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ ++ + GKW+ +L+ I K +RF++L+ ++ ++ ML + L L T+ +V K
Sbjct: 13 VQNTLQFISGKWKSVILYHIFKNNVLRFSELQAKLPYVSKRMLAKQLSELETDGIVAKRV 72
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ +P+ +Y++++ G+SL P++K I QWG
Sbjct: 73 YPVIPVKTEYRMTTFGESLRPVIKAIEQWG 102
>gi|23097809|ref|NP_691275.1| hypothetical protein OB0354 [Oceanobacillus iheyensis HTE831]
gi|22776033|dbj|BAC12310.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 116
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 54/87 (62%)
Query: 7 VVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPL 66
++ GKW+ +L + + ++RF+ LKR + GIT MLT+ L L E++ +V + +P
Sbjct: 16 ILVGKWKPIILLHLMEKGTVRFSDLKRSIPGITQKMLTKQLRELENEEIINRVVYPEVPP 75
Query: 67 HVKYQLSSKGKSLMPLLKQINQWGKLY 93
V+Y +S G++L LL +++WG+ +
Sbjct: 76 RVEYSISEYGRTLEDLLHAMHEWGQAH 102
>gi|86360091|ref|YP_471980.1| hypothetical protein RHE_PC00046 [Rhizobium etli CFN 42]
gi|86284193|gb|ABC93253.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 132
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+++++VG KW L ++ + K +RFN+L+R ++GI+ MLT +L L + LV++ F
Sbjct: 29 EILDLVGDKWTLYIIATL-KDGPVRFNELRRRIDGISQRMLTINLRGLERDGLVKRTLFP 87
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWG 90
T+P V Y+L+ G++L+ + + W
Sbjct: 88 TIPPRVDYELTDVGRTLLAPVMALVMWA 115
>gi|57238564|ref|YP_179695.1| transcriptional regulator, putative [Campylobacter jejuni RM1221]
gi|57167368|gb|AAW36147.1| transcriptional regulator, putative [Campylobacter jejuni RM1221]
Length = 115
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 58/83 (69%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GK+++++L+ + +Y+ +R+N+LKR ++ I+ LT +L L + L+ + ++ +
Sbjct: 19 LALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNTLRELENDGLIIRKEYAQI 78
Query: 65 PLHVKYQLSSKGKSLMPLLKQIN 87
P V+Y LS +G+SL+P+L+ ++
Sbjct: 79 PPKVEYSLSKRGQSLIPILQAMS 101
>gi|88602813|ref|YP_502991.1| putative transcriptional regulator [Methanospirillum hungatei JF-1]
gi|88188275|gb|ABD41272.1| putative transcriptional regulator [Methanospirillum hungatei JF-1]
Length = 121
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW+ ++W + K ++RF QL + ++ MLT+ L L + ++ + + +
Sbjct: 15 LAVIGGKWKALIIWQL-KGGTLRFTQLTERLPMVSPRMLTKQLRELEDDGVISRKIYPEV 73
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L++ G S++P+L+ + WG YL
Sbjct: 74 PPRVEYSLTALGTSVIPVLESLCAWGSEYL 103
>gi|91784027|ref|YP_559233.1| Putative transcriptional regulator [Burkholderia xenovorans LB400]
gi|91687981|gb|ABE31181.1| Putative transcriptional regulator [Burkholderia xenovorans LB400]
Length = 134
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ +V+ +VG KW + ++ V+ + RFN++KR + GI+ MLTR+L L + +V +
Sbjct: 16 VGKVLAIVGDKWTVMIVRVLID-RPRRFNEIKRTIGGISQQMLTRTLKALERDGMVSRTV 74
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ T+P V+Y L+ G+SL ++ + W +L
Sbjct: 75 YPTVPPQVEYALTPLGQSLAVPVRALGAWAGEHL 108
>gi|77978928|ref|ZP_00834351.1| COG1733: Predicted transcriptional regulators [Yersinia intermedia
ATCC 29909]
Length = 127
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLW-VINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKV 59
M Q +E++ GKW + +L+ +I IRF +L+R + IT LTR L LV +
Sbjct: 26 MVQFVELIAGKWAIPILYRLIVTAVPIRFGELQRAIAPITQKELTRQLRAFEQRGLVYRK 85
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQW 89
+ +P V+YQ+++ GK+L P L + QW
Sbjct: 86 VYAEVPPRVEYQITALGKTLQPTLDSLAQW 115
>gi|153895734|ref|ZP_02016315.1| helix-turn-helix, HxlR type [Halorubrum lacusprofundi ATCC 49239]
gi|151585428|gb|EDN48854.1| helix-turn-helix, HxlR type [Halorubrum lacusprofundi ATCC 49239]
Length = 129
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+E +G +WRL VL + +S RFN+LKRE + L+R LD L + V++ +
Sbjct: 37 LEQIGSRWRLVVLHELLNGES-RFNELKRETDA-NARTLSRVLDDLQETDFVDRRLEEDS 94
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P+ Y L+ KG+SL P+ ++I++W +L
Sbjct: 95 PVATYYSLTPKGESLAPVFEEIDEWAHEWL 124
>gi|54025775|ref|YP_120017.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54017283|dbj|BAD58653.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length = 124
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 51/87 (58%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+VV GKW+ +LW + + RF +L+R + GI+ ML + L L + +V++ +
Sbjct: 17 MDVVSGKWKGLILWELENHGVRRFGELRRGLPGISEKMLIQQLRELEEDGIVDRQAHPEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y+L+ G+SL L+ + WG+
Sbjct: 77 PPRVEYRLTELGRSLNRALEPLATWGR 103
>gi|70734284|ref|YP_257924.1| transcriptional regulator, putative [Pseudomonas fluorescens Pf-5]
gi|68348583|gb|AAY96189.1| transcriptional regulator, putative [Pseudomonas fluorescens Pf-5]
Length = 117
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 56/87 (64%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++ G+W+ VL + + +RFN+L+R + GI+ +LT+ L L LV + + +
Sbjct: 18 LDLIDGRWKGVVLHQLLANEFLRFNELQRRLPGISQRLLTKQLRDLEAAGLVSRTVYAEV 77
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y+L+ +G+SL P+++ ++ WG+
Sbjct: 78 PPRVEYRLTDEGQSLQPVIEALSAWGR 104
>gi|111222688|ref|YP_713482.1| Putative regulatory protein [Frankia alni ACN14a]
gi|111150220|emb|CAJ61915.1| Putative regulatory protein [Frankia alni ACN14a]
Length = 143
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+S V+++V +W +LW ++ + RF +L+R + IT +LT+ L L + LV +
Sbjct: 28 VSPVVDIVFSRWTTPILWTLHTFGRQRFVELERRIGTITPKVLTQRLRQLERDGLVVRTY 87
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
Q +P V+Y++S G SL PL + W +
Sbjct: 88 HQEVPPRVEYEISELGVSLAPLFAALAGWSQ 118
>gi|51246560|ref|YP_066444.1| hypothetical protein DP2708 [Desulfotalea psychrophila LSv54]
gi|50877597|emb|CAG37437.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 107
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ + V+GGKW+L +L++I + + RF ++K+ + IT MLT+ L L + ++ +
Sbjct: 9 VTTTLSVIGGKWKLIILYII-RDEKKRFGEIKKIIPAITQKMLTKQLRELECDGIIHRKV 67
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ +P V+Y L+ G SL P++ + WG+ +
Sbjct: 68 YPVVPPKVEYSLTKHGHSLTPIVDAMAIWGEAH 100
>gi|124879747|gb|EAY67103.1| hypothetical protein BCPG_05510 [Burkholderia cenocepacia PC184]
Length = 134
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ +V+ +VG KW + ++ V+ + + RFN++KR V GI+ MLTR+L L + +V +
Sbjct: 16 VGKVLAIVGDKWTVMIVRVLVE-RPHRFNEIKRTVGGISQQMLTRTLKALERDGMVSRTV 74
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ T+P V+Y L+ G++L ++ + W +L
Sbjct: 75 YPTVPPQVEYALTPLGQALAVPVRALGAWAGEHL 108
>gi|15613300|ref|NP_241603.1| cinnamoyl ester hydrolase [Bacillus halodurans C-125]
gi|10173351|dbj|BAB04456.1| cinnamoyl ester hydrolase [Bacillus halodurans C-125]
Length = 118
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++V+GGKW+ +L+ + + + RFN+L+R + GIT +L+ L L + +V + F +
Sbjct: 20 LDVIGGKWKGVILYYLLE-EKRRFNELRRLMPGITQRILSLQLRELEKDGIVHREVFPEV 78
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y ++ G++L P++ Q+ WG+ Y
Sbjct: 79 PPRVEYSITEFGRTLEPIINQMRDWGEEY 107
>gi|20138662|sp|Q93K57|MALR_FUSMR Putative regulatory protein malR
gi|15187323|gb|AAK91510.1| putative regulatory protein [Fusobacterium mortiferum]
Length = 106
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 53/87 (60%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ +GGKW+ +LW + R+ +LKR+++GIT ML + L L + L+ + ++ +
Sbjct: 18 LSFMGGKWKPIILWHLGTEGIHRYGELKRKLDGITHKMLAQQLKELADDNLIIRKEYPQV 77
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y ++ KG LM +L +++WG+
Sbjct: 78 PPKVEYSITEKGMGLMEILNLMHKWGQ 104
>gi|106884867|ref|ZP_01352234.1| Helix-turn-helix, HxlR type [Clostridium phytofermentans ISDg]
gi|106767633|gb|EAT24345.1| Helix-turn-helix, HxlR type [Clostridium phytofermentans ISDg]
Length = 105
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 58/90 (64%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ +VGGKW+ ++L+ + + +R++++KR + IT ML+ L L + L+ + ++ +
Sbjct: 15 LSLVGGKWKKHILFWLWHRKVMRYSEIKRVLKNITHKMLSNQLKELEADGLIIRKEYPQV 74
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y+L+ KG SLMP+L + +WG ++
Sbjct: 75 PPKVEYRLTDKGVSLMPVLDAMCKWGHQFV 104
>gi|77974527|ref|ZP_00830067.1| COG1733: Predicted transcriptional regulators [Yersinia
frederiksenii ATCC 33641]
Length = 102
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLW-VINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKV 59
M Q +E++ GKW + +L+ +I IRF +L+R + IT LTR L L+E+
Sbjct: 1 MVQFVELIAGKWAIPILYRLIVTAAPIRFGELQRAIKPITQKELTRQLRAFEQRGLLERR 60
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ +P V+Y++++ GK+L P L + QW +++
Sbjct: 61 VYAEVPPRVEYEITALGKTLRPTLDSLAQWMRIH 94
>gi|76802048|ref|YP_327056.1| hypothetical protein NP2812A [Natronomonas pharaonis DSM 2160]
gi|76557913|emb|CAI49497.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 108
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+ M+ +G KWRL VL + ++ RFN+LKR G + L+R LD L E VE+ +
Sbjct: 16 ESMDQIGSKWRLLVLHDL-QHGEKRFNELKRST-GANSRTLSRVLDDLQETEFVERRLEE 73
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P+ Y L+ KG+SL P+ +I +W +L
Sbjct: 74 DAPVATYYSLTQKGRSLAPVFDEIEEWADEWL 105
>gi|99080048|ref|YP_612202.1| transcriptional regulator, HxlR family [Silicibacter sp. TM1040]
gi|99036328|gb|ABF62940.1| transcriptional regulator HxlR family [Silicibacter sp. TM1040]
Length = 123
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M ++GGKW ++LW + K +RFN L R + G + M++ L L T L+ + +T
Sbjct: 29 MRIIGGKWTGSILWHL-KDGPVRFNDLSRMIGGASKKMISERLRQLETQGLITRTVMETA 87
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P+ V Y+++ G++ + L ++ +W +
Sbjct: 88 PVSVHYEITELGRTALGFLDELRKWSE 114
>gi|149278465|ref|ZP_01884602.1| Transcriptional regulator, MarR family protein [Pedobacter sp.
BAL39]
gi|149230835|gb|EDM36217.1| Transcriptional regulator, MarR family protein [Pedobacter sp.
BAL39]
Length = 116
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 5 MEVVGGKWRLNVLWVINKYQSI-RFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
MEV+ GKW++ ++W I Y I R L R + + +L L L+ ++ K+ F
Sbjct: 18 MEVMSGKWKIGLIWCI--YSGIKRPGALHRHMPKASRRILDSQLKQLLQQGIISKITFNQ 75
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
LPL V+Y+L+ GKSL+P+++ QWG+ +
Sbjct: 76 LPLKVEYELTELGKSLIPVIEVTAQWGETH 105
>gi|91977625|ref|YP_570284.1| helix-turn-helix, HxlR type [Rhodopseudomonas palustris BisB5]
gi|91684081|gb|ABE40383.1| helix-turn-helix, HxlR type [Rhodopseudomonas palustris BisB5]
Length = 130
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++ GKW+ +L+ + + + +RF +L++ + GIT MLT+ L L ++LV + F +
Sbjct: 18 LDLIDGKWKGIILYHLQEGR-LRFGELRKRMPGITQRMLTKQLRALEEDDLVTRQVFAEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y LS G L P++ + +WG+
Sbjct: 77 PPRVEYALSETGLRLRPVIDALKRWGE 103
>gi|118028668|ref|ZP_01500130.1| transcriptional regulator, HxlR family [Burkholderia phymatum
STM815]
gi|117985592|gb|EAU99968.1| transcriptional regulator, HxlR family [Burkholderia phymatum
STM815]
Length = 132
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 51/87 (58%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+V+ G +W L V+ ++ Y +R ++ R ++G+T MLTR+L L + LV + DF+
Sbjct: 22 EVLAHAGNRWSLGVVHMLGVYGRLRHAEIGRRMHGVTQRMLTRTLRQLERDGLVLRHDFE 81
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQW 89
+PL V+Y+LS G L+ + + W
Sbjct: 82 EMPLKVEYELSEAGMELLVRMVPLWTW 108
>gi|116694403|ref|YP_728614.1| transcriptional regulator, ArsR-family [Ralstonia eutropha H16]
gi|113528902|emb|CAJ95249.1| transcriptional regulator, ArsR-family [Ralstonia eutropha H16]
Length = 127
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKY---QSIRFNQLKREVNGITTIMLTRSLDILITNELVE 57
+ + M ++GG+WRL +I Y RFN+L+RE+ I+ MLT L L LV+
Sbjct: 10 VEEAMRLLGGRWRL----LIASYLLEGPKRFNELRREMPDISQRMLTLDLKALQEVGLVK 65
Query: 58 KVDFQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ F T+P+ V+Y+L+ G L P+++ + ++G
Sbjct: 66 RTAFPTVPVTVQYELTEDGARLAPVVEVMREFG 98
>gi|27380216|ref|NP_771745.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
110]
gi|27353370|dbj|BAC50370.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
110]
Length = 140
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ V+ VG KW + V+ ++ RFN+LKR +NGI+ MLT +L L + LV +
Sbjct: 32 VASVLSRVGDKWSVFVIMMLGDGPK-RFNELKRMINGISQRMLTLTLRGLERDGLVTRTI 90
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
F T+P V Y+L+ G+ L ++ + +W +L
Sbjct: 91 FPTIPPRVDYELTDLGRGLSRPVEALGKWAMEHL 124
>gi|118039967|ref|ZP_01511365.1| transcriptional regulator, HxlR family [Burkholderia phytofirmans
PsJN]
gi|117989774|gb|EAV04074.1| transcriptional regulator, HxlR family [Burkholderia phytofirmans
PsJN]
Length = 112
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW+ VL+ +N RF +LKR V GI+ +L + L L + ++ + D+QT+
Sbjct: 14 LTVIGGKWKPLVLFHLNNGPR-RFGELKRLVTGISEKVLIQQLRELADDGVIIRRDYQTV 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V Y+++ G SL LK + WG
Sbjct: 73 PPKVDYEMTPFGYSLAAALKPLCAWG 98
>gi|116491842|ref|YP_803577.1| Predicted transcriptional regulator [Pediococcus pentosaceus ATCC
25745]
gi|116101992|gb|ABJ67135.1| Predicted transcriptional regulator [Pediococcus pentosaceus ATCC
25745]
Length = 118
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+V+GGKW+ +L + Q R ++L+R + GI+ MLT+ L L + +V + + T+
Sbjct: 14 MDVIGGKWKPIILCNLRHGQQ-RPSELRRNIQGISQKMLTQQLRELEQDNIVVRKSYNTV 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y LS GKSL LL + WG++++
Sbjct: 73 PPKVEYYLSDYGKSLEKLLDTLCSWGEMHV 102
>gi|146301585|ref|YP_001196176.1| transcriptional regulator, HxlR family [Flavobacterium johnsoniae
UW101]
gi|146156003|gb|ABQ06857.1| transcriptional regulator, HxlR family [Flavobacterium johnsoniae
UW101]
Length = 115
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 53/86 (61%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+++ GKW+++++ I + RF + +VNGI+ ML++ L L N+L++++ T
Sbjct: 20 MDILNGKWKISIISSICYHNKRRFTDILNDVNGISNKMLSKELKELEINKLIKRIVLDTQ 79
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P+ + YQL+ G +L ++ + +WG
Sbjct: 80 PVTIHYQLTEYGLTLKTIINDLAEWG 105
>gi|148324449|gb|EDK89699.1| possible transcriptional regulator [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 104
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 54/90 (60%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+ ++ GKW+L +L+ + + +R+++LKR + IT ML+ L L + ++ + ++
Sbjct: 14 KTFSMINGKWKLRILYELACEKILRYSELKRNLTPITHKMLSTQLKELEEDGIIIRKEYP 73
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGKL 92
+P V+Y LS KG S +P++ + WGK+
Sbjct: 74 QVPPKVEYSLSEKGISFIPIIDAMCDWGKI 103
>gi|154150489|ref|YP_001404107.1| transcriptional regulator, HxlR family [Candidatus Methanoregula
boonei 6A8]
gi|153999041|gb|ABS55464.1| transcriptional regulator, HxlR family [Candidatus Methanoregula
boonei 6A8]
Length = 117
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNG-ITTIMLTRSLDILITNELVEKV 59
+ ++V+GGKW+ V++ + K ++RF+Q+ +V IT MLT+ L L + LV++
Sbjct: 14 IEATLDVIGGKWKPLVIYTL-KEGTLRFSQIVDKVEPRITQRMLTKELRELEKDGLVKRK 72
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ +P V+Y L+ KG+SL+P+L ++ WG ++
Sbjct: 73 VYAQVPPKVEYSLTKKGESLIPILDELCDWGSEHM 107
>gi|50364866|ref|YP_053291.1| transcriptional regulator, marR family [Mesoplasma florum L1]
gi|50363422|gb|AAT75407.1| transcriptional regulator, marR family [Mesoplasma florum L1]
Length = 101
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + + KW + ++ ++ + + RFN+L++ + GI+ +LT +L L N+LVE+
Sbjct: 7 LEYTLNFIKSKWVILIIRELS-FGTCRFNELEKRIAGISQKVLTSNLRFLEENKLVERTV 65
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
+ +P V+Y L+ GKSL P+L Q++ WG
Sbjct: 66 YPVVPPKVEYSLTDLGKSLKPILDQMSDWG 95
>gi|123443552|ref|YP_001007525.1| hypothetical protein YE3353 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090513|emb|CAL13382.1| hypothetical protein [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 127
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLW-VINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKV 59
M Q +E++ GKW + +L+ +I IRF +L+R + IT LTR L LV +
Sbjct: 26 MVQFVELIAGKWAIPILYRLIVTAAPIRFGELQRAIAPITQKELTRQLRAFEQRGLVYRK 85
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQW 89
+ +P V+Y+++S G++L P L + QW
Sbjct: 86 IYAEVPPRVEYEITSLGRTLKPTLDSLAQW 115
>gi|126736032|ref|ZP_01751776.1| putative transcriptional regulator [Roseobacter sp. CCS2]
gi|126714589|gb|EBA11456.1| putative transcriptional regulator [Roseobacter sp. CCS2]
Length = 126
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 7 VVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPL 66
V+GGKW+ +++ + + RF++LKR + + MLTRSL L +ELV++ +P+
Sbjct: 38 VIGGKWKPILMFHLVSGEK-RFSELKRLLPQTSDRMLTRSLRELEDDELVKREVVAEVPV 96
Query: 67 HVKYQLSSKGKSLMPLLKQINQWG 90
V Y L+ G+SL+P+L ++ WG
Sbjct: 97 RVTYSLTKDGRSLIPVLNAMSDWG 120
>gi|15888340|ref|NP_354021.1| hypothetical protein AGR_C_1831 [Agrobacterium tumefaciens str.
C58]
gi|17934905|ref|NP_531695.1| hypothetical protein Atu0997 [Agrobacterium tumefaciens str. C58]
gi|15156012|gb|AAK86806.1| AGR_C_1831p [Agrobacterium tumefaciens str. C58]
gi|17739385|gb|AAL42011.1| Conserved Hypothetical Protein [Agrobacterium tumefaciens str. C58]
Length = 129
Score = 57.0 bits (136), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 51/94 (54%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + + GKW+ +L+ + ++RFN+L+R + +T MLT+ L L L+ +
Sbjct: 17 VESALSFLDGKWKGVILYHLINEGTLRFNELRRHIPSVTQRMLTKQLRELEEAGLISRTV 76
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
F +P V Y L+ G+++ P++ + WG ++
Sbjct: 77 FPVVPPRVDYALTPLGETMRPVISALKSWGDAHV 110
>gi|150017921|ref|YP_001310175.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
gi|149904386|gb|ABR35219.1| transcriptional regulator, HxlR family [Clostridium beijerinckii
NCIMB 8052]
Length = 117
Score = 57.0 bits (136), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
M+ + ++ GKW++ +LW +++ +IRFN+L+R + IT LT L L + ++ +
Sbjct: 13 MNLTINILSGKWKIAILWHLSR-GTIRFNELQRLLTNITQKTLTMQLRELERDGIIYREV 71
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ P V+Y L+S G+S+ P+L + WGK Y
Sbjct: 72 YPESPPRVEYGLTSIGESMTPILSAMCDWGKGY 104
>gi|146301587|ref|YP_001196178.1| transcriptional regulator, HxlR family [Flavobacterium johnsoniae
UW101]
gi|146156005|gb|ABQ06859.1| transcriptional regulator, HxlR family [Flavobacterium johnsoniae
UW101]
Length = 121
Score = 56.6 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 6 EVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLP 65
EV+ GKW++ +LW IN+ R ++L+R++ + +L L L +ELV K+ + +P
Sbjct: 19 EVLYGKWKIRLLWFINEGHK-RPSELQRKIPDASRRVLNIQLKELEEHELVSKIIYPVVP 77
Query: 66 LHVKYQLSSKGKSLMPLLKQINQWG 90
V+Y L+ GK+L+P++ I WG
Sbjct: 78 PKVEYSLTDFGKTLIPVISAIGNWG 102
>gi|148927414|ref|ZP_01810934.1| transcriptional regulator, HxlR family [candidate division TM7
genomosp. GTL1]
gi|147887234|gb|EDK72698.1| transcriptional regulator, HxlR family [candidate division TM7
genomosp. GTL1]
Length = 127
Score = 56.6 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 53/89 (59%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
V+ +GGKW++ +LW + + R+++LK ++ ++ ML++ L L + LV +V +
Sbjct: 13 VLGKIGGKWKMPILWRLGLRDAWRYSELKHDLENVSHKMLSQQLKELEKDGLVVRVSYPV 72
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGKL 92
+P V+Y L+ KGK+ +P + + G +
Sbjct: 73 IPPKVEYSLTEKGKATIPAISALCNLGSI 101
>gi|153010348|ref|YP_001371562.1| transcriptional regulator, HxlR family [Ochrobactrum anthropi ATCC
49188]
gi|151562236|gb|ABS15733.1| transcriptional regulator, HxlR family [Ochrobactrum anthropi ATCC
49188]
Length = 131
Score = 56.6 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ ++ VG KW + V+ + + +RFN+L+R V+GI+ MLT +L L + V +
Sbjct: 15 VADILSRVGDKWTVLVVSYLGNH-PMRFNELRRSVDGISQKMLTTTLRNLERDGFVTRTI 73
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
F T+P V+Y+L+ G L+ ++ + +W
Sbjct: 74 FPTIPPKVEYELTEMGSDLLRPVRALGEWA 103
>gi|148927398|ref|ZP_01810918.1| transcriptional regulator, HxlR family [candidate division TM7
genomosp. GTL1]
gi|147887218|gb|EDK72682.1| transcriptional regulator, HxlR family [candidate division TM7
genomosp. GTL1]
Length = 127
Score = 56.6 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 53/89 (59%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
V+ +GGKW++ +LW + + R+++LK ++ ++ ML++ L L + LV +V +
Sbjct: 13 VLGKIGGKWKMPILWRLGLRDAWRYSELKHDLENVSHKMLSQQLXELEKDGLVVRVSYPV 72
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGKL 92
+P V+Y L+ KGK+ +P + + G +
Sbjct: 73 IPPKVEYSLTEKGKATIPAISALCNLGSI 101
>gi|13476431|ref|NP_108001.1| hypothetical protein mll7749 [Mesorhizobium loti MAFF303099]
gi|14027192|dbj|BAB54146.1| mll7749 [Mesorhizobium loti MAFF303099]
Length = 120
Score = 56.6 bits (135), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ + GKW+ VL+ + + ++RFN+++R + T MLT L L + L+++ + +
Sbjct: 21 LRYIDGKWKGVVLYHLFE-GTLRFNEIRRRIPNCTQRMLTNQLRELEADGLIDRKIYPEV 79
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ +G+SL P++ + +WG
Sbjct: 80 PPKVEYSLTPRGRSLAPVITALKEWG 105
>gi|34540600|ref|NP_905079.1| hypothetical protein PG0823 [Porphyromonas gingivalis W83]
gi|34541121|ref|NP_905600.1| hypothetical protein PG1450 [Porphyromonas gingivalis W83]
gi|34396913|gb|AAQ65978.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
gi|34397437|gb|AAQ66499.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 104
Score = 56.6 bits (135), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M++ GKW L +++ IN+ + IR+ +LKR + GI+ ML L L L++K + +
Sbjct: 16 MQIFAGKWTLLIIFQINR-RIIRYGELKRAIPGISEKMLIDELKFLCGKGLIKKKQYPEV 74
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ G+ ++P++ +I ++G
Sbjct: 75 PPRVEYSLTPLGEKVLPIIDEIAKFG 100
>gi|152966561|ref|YP_001362345.1| transcriptional regulator, HxlR family [Kineococcus radiotolerans
SRS30216]
gi|151361078|gb|ABS04081.1| transcriptional regulator, HxlR family [Kineococcus radiotolerans
SRS30216]
Length = 175
Score = 56.6 bits (135), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
+++ + KW + V+ V+ + RFN+LKR ++G+T +LT++L L N ++E++ T
Sbjct: 69 ILDQIADKWSMMVMAVLE--EPTRFNELKRRLDGVTQRVLTQTLRRLERNGMIERIVLPT 126
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWG 90
P+ V+Y L+ G+SL + W
Sbjct: 127 SPVGVQYALTPMGESLREPFGHLYTWA 153
>gi|124002573|ref|ZP_01687426.1| transcriptional regulator, MarR family [Microscilla marina ATCC
23134]
gi|123992402|gb|EAY31770.1| transcriptional regulator, MarR family [Microscilla marina ATCC
23134]
Length = 144
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 51/86 (59%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+++ GKW++ +L V+ YQ F L+R+V GIT ML++ L L N LV++ T
Sbjct: 47 LDIFSGKWKIPILSVLYYYQKRGFKDLQRDVTGITARMLSKELKELEMNLLVKRHVLDTR 106
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P+ V+Y+++ G S ++++ WG
Sbjct: 107 PVKVEYEITPYGVSSSKIIQEFYNWG 132
>gi|124514560|gb|EAY56073.1| putative transcriptional regulator [Leptospirillum sp. Group II
UBA]
Length = 111
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+E++GGKW+ +L+ + + RFN+L R + +T +L R L L +++V + + +
Sbjct: 18 LEIIGGKWKGVILFHLLG-GTKRFNELHRLLPNVTQRILIRQLRELEADKIVVRTVYPEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y LS G +L P+L+ + +WG YL
Sbjct: 77 PPKVEYSLSESGMTLEPILRMLREWGVNYL 106
>gi|153811530|ref|ZP_01964198.1| hypothetical protein RUMOBE_01922 [Ruminococcus obeum ATCC 29174]
gi|149832271|gb|EDM87356.1| hypothetical protein RUMOBE_01922 [Ruminococcus obeum ATCC 29174]
Length = 117
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ + ++GGKW+L +L + K + RFN+L+R ++GI+ +LT SL ++++ L + D
Sbjct: 19 VATAVSLIGGKWKLLILRNL-KERPWRFNELQRSIDGISQKVLTDSLRQMMSDGLAYRHD 77
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ P V+Y L+ G ++P++ + +G Y
Sbjct: 78 YHEQPPRVEYGLTELGTKMLPIVNSLADFGNYY 110
>gi|119505196|ref|ZP_01627271.1| hypothetical protein MGP2080_14486 [marine gamma proteobacterium
HTCC2080]
gi|119458887|gb|EAW39987.1| hypothetical protein MGP2080_14486 [marine gamma proteobacterium
HTCC2080]
Length = 113
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+S + ++GGKW++ +++ + + + +RF +LKR + IT MLT+ L + + L+ +
Sbjct: 8 VSTALSLIGGKWKIAIIYNL-RLEPVRFGELKRILAPITQQMLTKQLREMERDCLINRKV 66
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQW 89
++ +P V+Y L+ G+S MP+++ + +W
Sbjct: 67 YEVIPPKVEYSLTDFGQSFMPVMESLCKW 95
>gi|90424907|ref|YP_533277.1| putative transcriptional regulator [Rhodopseudomonas palustris
BisB18]
gi|90106921|gb|ABD88958.1| putative transcriptional regulator [Rhodopseudomonas palustris
BisB18]
Length = 132
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++ GKW+ +L+ + + + +RF +L++++ GIT MLT+ L L + LV + F +
Sbjct: 18 LDLIDGKWKGVILYHLQEGR-LRFGELRKKMPGITQRMLTKQLRALEDDALVTRKVFAEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y LS G L P++ + +WG+
Sbjct: 77 PPRVEYALSETGLRLRPVIDALRRWGE 103
>gi|34762968|ref|ZP_00143946.1| Transcriptional regulator, MarR family [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27887356|gb|EAA24448.1| Transcriptional regulator, MarR family [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 113
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQS-IRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
+ ++GGK+++ +++ + + +R+N LKR + I+ LT +L L ++++ + ++
Sbjct: 22 LSLIGGKYKMIIIYKLYENSPFMRYNDLKRSIGNISFKTLTSTLKELEKDDIIVRKEYPQ 81
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P V+Y LS KGKSL+P+L + WG+
Sbjct: 82 IPPRVEYSLSKKGKSLIPILNMMCDWGE 109
>gi|116512074|ref|YP_809290.1| Predicted transcriptional regulator [Lactococcus lactis subsp.
cremoris SK11]
gi|116107728|gb|ABJ72868.1| Predicted transcriptional regulator [Lactococcus lactis subsp.
cremoris SK11]
Length = 132
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEK-V 59
+ ++++ G+W+ +L + K + + FN+L R + T ML L L+ +++ K +
Sbjct: 22 LDTTIKILSGRWKTIILNRLMK-EELHFNELARRIPDCTRRMLALQLHELVEAQIIRKNI 80
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+F+ LP+ + Y+L++ GKSL+P++ +N WG Y+
Sbjct: 81 NFELLPVQISYELTNLGKSLLPIVWTMNDWGIQYI 115
>gi|16126079|ref|NP_420643.1| hypothetical protein CC_1836 [Caulobacter crescentus CB15]
gi|13423275|gb|AAK23811.1| conserved hypothetical protein [Caulobacter crescentus CB15]
Length = 110
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
+++++GGKW + +L + + +R L R++ GI+ MLT++L L N VE++ +
Sbjct: 1 MLDLIGGKWAILILCCLQQ-GPVRTGSLMRQIGGISQKMLTQTLRDLEQNGFVERISYPE 59
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQW 89
+P V+Y+L+ G+SL L + + QW
Sbjct: 60 VPPRVEYRLTELGQSLSALARTLEQW 85
>gi|52080519|ref|YP_079310.1| putative transcriptional regulator YdzF [Bacillus licheniformis
ATCC 14580]
gi|52785898|ref|YP_091727.1| YdzF [Bacillus licheniformis ATCC 14580]
gi|52003730|gb|AAU23672.1| putative transcriptional regulator [Bacillus licheniformis ATCC
14580]
gi|52348400|gb|AAU41034.1| YdzF [Bacillus licheniformis DSM 13]
Length = 116
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 56/87 (64%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GK+++ +L+ +++ + +R N+LKR + I+ L+ L L + L+ + +F +
Sbjct: 25 LSLISGKYKIVILYWLSEREVMRHNELKRSIGTISFKTLSIMLKELEADGLIIRREFPQI 84
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y LS +G+S++PLL + +WG+
Sbjct: 85 PPKVEYSLSERGRSIVPLLNMMCEWGE 111
>gi|15789885|ref|NP_279709.1| hypothetical protein VNG0704C [Halobacterium sp. NRC-1]
gi|10580285|gb|AAG19189.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
Length = 123
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 53/94 (56%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ +VG KW ++ + + FN L+ EV+GI++ +L+ SLD L ++V +
Sbjct: 19 ITTTASLVGKKWHPVIIHRLLSEGPLGFNALQEEVDGISSKVLSESLDDLEDKQIVSRTI 78
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P+ V+Y L+ G+SL P++ + +WG +L
Sbjct: 79 VSEKPVRVEYALTELGQSLEPVVSSMAEWGHQHL 112
>gi|29377247|ref|NP_816401.1| hypothetical protein EF2774 [Enterococcus faecalis V583]
gi|29344713|gb|AAO82471.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 118
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+V+GGKW+ +L + ++ ++R + LKR + GI+ MLT+ L L + ++E+ + +
Sbjct: 14 MDVIGGKWKPIILCNL-RHGAMRPSDLKRGITGISQKMLTQQLRELEEDNIIERKVYNQV 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y LS G+SL +L + WG+ ++
Sbjct: 73 PPKVEYYLSDYGQSLSAVLDNLCNWGESHV 102
>gi|71082846|ref|YP_265565.1| Transcriptional regulator [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762731|ref|ZP_01264696.1| Transcriptional regulator [Candidatus Pelagibacter ubique
HTCC1002]
gi|71061959|gb|AAZ20962.1| Transcriptional regulator [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718533|gb|EAS85183.1| Transcriptional regulator [Candidatus Pelagibacter ubique
HTCC1002]
Length = 119
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 53/84 (63%)
Query: 8 VGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPLH 67
+GGKW++ +L+ + + + IRF +LK+ + IT ML++ L L + ++ + + +P
Sbjct: 16 LGGKWKIRILFSLLQSKKIRFGELKKGLKTITQQMLSKQLKELEGDGIINRKVIRIMPPK 75
Query: 68 VKYQLSSKGKSLMPLLKQINQWGK 91
V+Y L+ G S+MP+L+ ++W K
Sbjct: 76 VEYSLTEFGLSVMPILRSFSEWNK 99
>gi|22417094|gb|AAM96657.1| unknown [Sphingobium chlorophenolicum]
Length = 128
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+++V+ VG KW + V+ + +S+RFN+L+R V G++ MLT +L L + L+ +
Sbjct: 17 ITEVLARVGDKWSILVIGRLGD-RSMRFNELRRSVEGVSQRMLTLTLRGLERDGLITRTV 75
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
++P V Y+L+ G+SL+ ++Q+ +W +
Sbjct: 76 TSSIPPRVDYELTGLGRSLLVPVEQLARWAQ 106
>gi|148256800|ref|YP_001241385.1| putative transcriptional regulatory protein [Bradyrhizobium sp.
BTAi1]
gi|146408973|gb|ABQ37479.1| putative transcriptional regulatory protein [Bradyrhizobium sp.
BTAi1]
Length = 124
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
Q+++ VG KW + +L ++ + Q +RFNQL+R + GI+ ML++ L L + LV +
Sbjct: 15 QILDRVGDKWAVLIL-ILLRNQPLRFNQLRRTIEGISQKMLSQVLKSLERDGLVRRRAIA 73
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
T+P+ V+Y ++ G +L + + W + +L
Sbjct: 74 TVPVTVEYSITPLGLTLAAAVDPLRDWAERHL 105
>gi|27380481|ref|NP_772010.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
110]
gi|27353645|dbj|BAC50635.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
110]
Length = 128
Score = 55.5 bits (132), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++ GKW+ +L+ + + RF +L+R + GIT MLT+ L L ++LV + + +
Sbjct: 18 LDLIDGKWKGVILYHLQD-GTQRFGELRRRMPGITQRMLTKQLRALEEDKLVIRKVYAEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y LS G+SL P++ + WG+
Sbjct: 77 PPRVEYCLSELGESLRPVIDILKAWGE 103
>gi|153896603|ref|ZP_02017178.1| helix-turn-helix, HxlR type [Halorubrum lacusprofundi ATCC 49239]
gi|151584697|gb|EDN48129.1| helix-turn-helix, HxlR type [Halorubrum lacusprofundi ATCC 49239]
Length = 125
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
Q+ E++G KW +VL +++ Q FN+++R ++G+T ML+R L L + VEK
Sbjct: 15 QLREILGSKWAFHVLRLLSDRQ-YGFNEMQRSIDGVTATMLSRRLKELQCHGFVEKQVEP 73
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQ 88
T P Y+L+ G++ + LL+++ +
Sbjct: 74 TTPPSTTYELTENGEAFVGLLEEMEE 99
>gi|50119691|ref|YP_048858.1| putative transcriptional regulator [Erwinia carotovora subsp.
atroseptica SCRI1043]
gi|49610217|emb|CAG73660.1| putative transcriptional regulator [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 121
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLW-VINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKV 59
M + ++ GKW + +L+ +I + +RF+ L+R + IT LTR L + +LV++
Sbjct: 20 MVNFVNLIAGKWAIPILYRLIVIGEPVRFSALQRAIAPITQKELTRQLRLFEQRKLVQRK 79
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQW 89
+ +P V+YQ++ GKSL P L + W
Sbjct: 80 VYAEVPPRVEYQITPLGKSLQPTLDSLADW 109
>gi|148256361|ref|YP_001240946.1| putative transcriptional regulatory protein [Bradyrhizobium sp.
BTAi1]
gi|146408534|gb|ABQ37040.1| putative transcriptional regulatory protein [Bradyrhizobium sp.
BTAi1]
Length = 125
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
++++ GKW+ +L+ + S RF +L+R + GIT MLT+ L L + LV + + +
Sbjct: 18 LDLIDGKWKGVILYHLQG-GSQRFGELRRLMPGITQRMLTKQLRALEEDGLVVRKVYAEV 76
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V Y LS G+SL P+++ + WG+
Sbjct: 77 PPRVDYSLSEIGESLRPVIEVLRSWGE 103
>gi|110638877|ref|YP_679085.1| transcriptional regulator [Cytophaga hutchinsonii ATCC 33406]
gi|110281558|gb|ABG59744.1| transcriptional regulator [Cytophaga hutchinsonii ATCC 33406]
Length = 120
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 56/90 (62%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GG+W++N+L + + +RF++L+ ++ GI+ ML L L + L+ K+ +
Sbjct: 27 LSVIGGRWKINILSFLLHEKKLRFSELRNKLVGISERMLISKLKELEQDGLINKIIHAQV 86
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y+L+ G SL LL +++WG++ L
Sbjct: 87 PPKVEYELTELGYSLEELLNLMDKWGEVTL 116
>gi|145595513|ref|YP_001159810.1| helix-turn-helix, HxlR type [Salinispora tropica CNB-440]
gi|145304850|gb|ABP55432.1| helix-turn-helix, HxlR type [Salinispora tropica CNB-440]
Length = 130
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
++ V KW ++ + + +++RF +L+ EV GI+ MLT++L +L N LVE+ +
Sbjct: 25 EIFSEVANKWAFLIIEFLGQ-RTMRFGELRDEVGGISHKMLTQNLRMLERNGLVERTVYP 83
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
T+P V+Y L+ G++L ++ + W + Y
Sbjct: 84 TIPPRVEYTLTGAGEALRSVVDGMCGWTQRYF 115
>gi|118713174|ref|ZP_01565741.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia
MC0-3]
gi|118649388|gb|EAV56186.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia
MC0-3]
gi|124876071|gb|EAY66061.1| hypothetical protein BCPG_04434 [Burkholderia cenocepacia PC184]
Length = 137
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+V+ G +W L V+ + Y +R ++ R ++G+T MLTR+L L + LV + DFQ
Sbjct: 27 EVLAHAGSRWSLGVVHALGVYGRLRHAEIGRRMHGVTQRMLTRTLRQLERDGLVLRHDFQ 86
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQW 89
+P V+Y+LS G L+ + + W
Sbjct: 87 EVPPRVEYELSDTGMELLVRMVPLWTW 113
>gi|95928656|ref|ZP_01311403.1| transcriptional regulator, HxlR family [Desulfuromonas
acetoxidans DSM 684]
gi|95135446|gb|EAT17098.1| transcriptional regulator, HxlR family [Desulfuromonas
acetoxidans DSM 684]
Length = 113
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++ + V+GGKW+ +L + K + RF +L+ + G+T +LT+ L L LV ++
Sbjct: 6 VATTLSVMGGKWKPLILCQLFK-KPRRFTELQ-TIPGVTPKVLTQQLRELEQEGLVRRII 63
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
Q +P HV+Y+++ G++L P+L+ + QWG+
Sbjct: 64 VQVVPTHVEYRMTDYGETLCPVLRAMGQWGE 94
>gi|87121099|ref|ZP_01076990.1| transcriptional regulator, putative [Marinomonas sp. MED121]
gi|86163591|gb|EAQ64865.1| transcriptional regulator, putative [Marinomonas sp. MED121]
Length = 107
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 7 VVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPL 66
++ GKW+L +L+ + R+++L+R + + MLTRSL L ++L+ + F +P+
Sbjct: 21 LLSGKWKLTILYQLLSGPK-RYSELQRLLPDASDRMLTRSLQELKDDQLISRTAFAEVPV 79
Query: 67 HVKYQLSSKGKSLMPLLKQINQWG 90
V+Y+L+ G++L+P+ + WG
Sbjct: 80 RVEYELTEDGQALVPIFDAMQTWG 103
>gi|77918692|ref|YP_356507.1| predicted transcriptional regulator MarR family [Pelobacter
carbinolicus DSM 2380]
gi|77544775|gb|ABA88337.1| predicted transcriptional regulator MarR family [Pelobacter
carbinolicus DSM 2380]
Length = 116
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW+ +L+ + + Q++RF++L+R T MLT+ L L + LV + + +
Sbjct: 26 LAVIGGKWKAAILYHLAQ-QTMRFSELQRYFTNTTRKMLTQQLRELERDGLVHREVYPQV 84
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+Y L+ +G+S+ P+L + +WG
Sbjct: 85 PPKVEYWLTDEGRSIKPILDLMCEWG 110
>gi|146341913|ref|YP_001206961.1| putative transcriptional regulatory protein, related to MarR family
[Bradyrhizobium sp. ORS278]
gi|146194719|emb|CAL78744.1| putative transcriptional regulatory protein, related to MarR family
[Bradyrhizobium sp. ORS278]
Length = 124
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
Q+++ VG KW + +L ++ + + +RFNQL+R + GI+ ML++ L L + LV +
Sbjct: 15 QILDRVGDKWAVLIL-ILLRNEPLRFNQLRRAIEGISQKMLSQVLKSLERDGLVRRRAIA 73
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
T+P+ V+Y ++ G +L + + W + +L
Sbjct: 74 TVPVTVEYSITPLGLTLAAAVDPLRDWAERHL 105
>gi|86360886|ref|YP_472773.1| probable transcriptional regulator protein, MarR family [Rhizobium
etli CFN 42]
gi|86284988|gb|ABC94046.1| probable transcriptional regulator protein, MarR family [Rhizobium
etli CFN 42]
Length = 122
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GKW+ +L+ + + +IRFN+++R V +T LT L L + L+ + + +
Sbjct: 21 ISLIDGKWKCVILFHLLE-GTIRFNEIRRRVPAVTQRTLTNQLRELEMDGLIVRKVYAEV 79
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKL 92
P V+Y LS G S+ P+L + +WG L
Sbjct: 80 PPKVEYSLSELGLSMAPVLSALKEWGDL 107
>gi|149376500|ref|ZP_01894261.1| putative transcriptional regulator [Marinobacter algicola DG893]
gi|149359167|gb|EDM47630.1| putative transcriptional regulator [Marinobacter algicola DG893]
Length = 167
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIR-FNQLKREVNGITTIMLTRSLDILITNELVEKV 59
+++ + VVG +W L +L + + +R F+Q + + GIT +LT L L+ N+++ KV
Sbjct: 13 VARALAVVGDRWTLIILR--DCFLGVRRFDQFESRL-GITRHVLTDRLKKLVENDVLTKV 69
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+Q PL +Y+L+ KG +L P++ + WG Y+
Sbjct: 70 PYQEKPLREEYRLTEKGLALHPVIMSLVHWGNTYM 104
>gi|90962651|ref|YP_536567.1| Transcriptional regulator, MarR family [Lactobacillus salivarius
subsp. salivarius UCC118]
gi|90821845|gb|ABE00484.1| Transcriptional regulator, MarR family [Lactobacillus salivarius
subsp. salivarius UCC118]
Length = 118
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
M+V+GGKW+ +L + ++QS+R ++LKR + I+ MLT+ L L +++ + + +
Sbjct: 14 MDVIGGKWKPIILCNL-RHQSLRTSELKRLIPNISQKMLTQQLRELEAADIINRKVYNQV 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y LS G+SL +L + WG++++
Sbjct: 73 PPKVEYSLSDYGQSLSTVLSDLCTWGEMHV 102
>gi|110638683|ref|YP_678892.1| conserved hypothetical protein (possible transcription regulator)
[Cytophaga hutchinsonii ATCC 33406]
gi|110281364|gb|ABG59550.1| conserved hypothetical protein (possible transcription regulator)
[Cytophaga hutchinsonii ATCC 33406]
Length = 112
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ +E + GKW+L ++ ++ + RF ++ +++NGIT ML++ L +L N+L+++
Sbjct: 14 IKDALEALEGKWKLLIMLSLST-GTKRFKEISKDINGITDKMLSKELKMLEENKLIKRDV 72
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
F T P V+Y ++ GKS+ +L + WG
Sbjct: 73 FDTFPPTVEYSITKHGKSIEKVLDALYLWG 102
>gi|23130058|ref|ZP_00111877.1| COG1733: Predicted transcriptional regulators [Nostoc punctiforme
PCC 73102]
Length = 117
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+S +M ++ G W + +LWV+ RF LK V GI+T +LT L +L E++ +
Sbjct: 12 ISILMSLLSGPWTMYILWVLCNSGPTRFVALKHLVEGISTKVLTERLRMLEAAEIIYRQY 71
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQIN 87
T+P V Y L+ +G+ L+ +L Q+N
Sbjct: 72 EPTVPPQVTYGLTERGQELIEILHQLN 98
>gi|116333393|ref|YP_794920.1| Predicted transcriptional regulator [Lactobacillus brevis ATCC 367]
gi|116098740|gb|ABJ63889.1| Predicted transcriptional regulator [Lactobacillus brevis ATCC 367]
Length = 126
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 55/93 (59%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ ++++ GKW+ +L+ + + Q R++ +R + I++ ML R L L+ + +V K
Sbjct: 16 VESTLQIISGKWKSVILYRLFQEQVARYSDFERWLPTISSRMLARQLQELVADGVVTKQI 75
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
+ +P +Y+L+ G++L P+++ + WG+ Y
Sbjct: 76 YAQIPPKTEYRLTEFGQTLRPVIEAMEHWGQYY 108
>gi|68233635|ref|ZP_00572749.1| Protein of unknown function DUF24 [Frankia sp. EAN1pec]
gi|68198730|gb|EAN12988.1| Protein of unknown function DUF24 [Frankia sp. EAN1pec]
Length = 185
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+V++ V GKW + +L V + +RF +L+R VNGI+ MLT +L L + L+ + +
Sbjct: 73 EVLDQVSGKWSIGIL-VAAAHGPVRFTELERTVNGISRRMLTLTLRRLERDGLLVRKVYP 131
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
T+P V+Y +S + L L + +W +
Sbjct: 132 TVPPKVEYTATSAARELFGPLTALTEWAE 160
>gi|17546857|ref|NP_520259.1| hypothetical protein RSc2138 [Ralstonia solanacearum GMI1000]
gi|17429157|emb|CAD15845.1| putative helix-turn-helix, hxlr type; transcription regulator
protein [Ralstonia solanacearum]
Length = 125
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+V++ VG KW + + +++ +RFN + R + GI+ MLT +L L + LV + +
Sbjct: 17 EVLDRVGDKWTVTAIGALSE-GPMRFNAIMRAIRGISHRMLTLTLRGLERDGLVSRTVYA 75
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWG 90
T+P V+Y+L+ G+SL+ L+ + W
Sbjct: 76 TVPPKVEYELTEVGRSLIEPLRTLANWA 103
>gi|77963224|ref|ZP_00827036.1| COG1733: Predicted transcriptional regulators [Yersinia
mollaretii ATCC 43969]
Length = 102
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLW-VINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKV 59
M Q +E++ GKW + +L+ +I IRF +L+R + IT LTR L LV +
Sbjct: 1 MVQFVELIAGKWAIPILYRLIVTAAPIRFGELQRAIVPITQKELTRQLRAFEQRGLVNRQ 60
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQW 89
+ +P V+Y+++ GK+L P L + QW
Sbjct: 61 VYAEVPPRVEYEITPLGKTLKPTLDSLAQW 90
>gi|119882101|ref|ZP_01648385.1| transcriptional regulator, HxlR family [Salinispora arenicola
CNS205]
gi|119825069|gb|EAX27626.1| transcriptional regulator, HxlR family [Salinispora arenicola
CNS205]
Length = 230
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
++ V KW ++ + + +++RF +L+ EV GI+ MLT++L +L N LVE+ +
Sbjct: 125 EIFSDVANKWAFLIIEFLGQ-RTMRFGELRDEVGGISHKMLTQNLRMLERNGLVERTAYP 183
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQW 89
T+P V+Y L+ G++L ++ + W
Sbjct: 184 TIPPRVEYTLTEAGEALRSVVDGMCGW 210
>gi|86740708|ref|YP_481108.1| putative transcriptional regulator [Frankia sp. CcI3]
gi|86567570|gb|ABD11379.1| putative transcriptional regulator [Frankia sp. CcI3]
Length = 134
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+V+ + GKW + +L I+ +RF +L+R ++GI+ MLT +L L + L+ +V +
Sbjct: 23 EVLNRISGKWAIGILLRISD-GPVRFTELQRSISGISRRMLTLTLRNLERDGLLTRVVYP 81
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
T+P V+YQ + + L L+ + W +
Sbjct: 82 TVPPKVEYQATDMARELYATLRTLTSWAE 110
>gi|126650328|ref|ZP_01722556.1| hypothetical protein BB14905_18280 [Bacillus sp. B14905]
gi|126592978|gb|EAZ86960.1| hypothetical protein BB14905_18280 [Bacillus sp. B14905]
Length = 116
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW+ +L+ + + RFN+ +R + IT MLT L L + ++ + F+ +
Sbjct: 25 LAVIGGKWKGVILYHLMS-GTKRFNEFRRLMPDITQRMLTLQLRELEKDGIIHREIFKEV 83
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ G++L P++K + WG+ Y
Sbjct: 84 PPKVEYSLTEFGRTLEPIIKLMRDWGEQY 112
>gi|118589186|ref|ZP_01546593.1| hypothetical protein SIAM614_14078 [Stappia aggregata IAM 12614]
gi|118438515|gb|EAV45149.1| hypothetical protein SIAM614_14078 [Stappia aggregata IAM 12614]
Length = 134
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 53/86 (61%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++ GKW+ +L+++ + + +RFN+ ++ + IT +LT L + + L+ + + +
Sbjct: 28 LSLIDGKWKGVILFLLMEKEVMRFNEFQKALPDITQRILTAQLRSMEADGLIVRTVYPVV 87
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWG 90
P V+YQL+ G SL P++K + +WG
Sbjct: 88 PPKVEYQLTDLGVSLSPVVKALARWG 113
>gi|30263363|ref|NP_845740.1| hypothetical protein BA3457 [Bacillus anthracis str. Ames]
gi|47528741|ref|YP_020090.1| hypothetical protein GBAA3457 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186208|ref|YP_029460.1| hypothetical protein BAS3203 [Bacillus anthracis str. Sterne]
gi|65320691|ref|ZP_00393650.1| COG1733: Predicted transcriptional regulators [Bacillus anthracis
str. A2012]
gi|30257997|gb|AAP27226.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47503889|gb|AAT32565.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180135|gb|AAT55511.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
Length = 114
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+EV+GGKW++ +L + K + R ++LKR + GIT MLT+ L L + ++++ + +
Sbjct: 12 LEVIGGKWKVVILCHLKK-GTKRTSELKRLMPGITQKMLTQQLRELEEDGVIQRKVYDQM 70
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ G SL +L + WG+++L
Sbjct: 71 PPKVEYSLTDYGSSLGAILDSLCSWGEVHL 100
>gi|89055975|ref|YP_511426.1| putative transcriptional regulator [Jannaschia sp. CCS1]
gi|88865524|gb|ABD56401.1| putative transcriptional regulator [Jannaschia sp. CCS1]
Length = 109
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 8 VGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLPLH 67
+GGKW+ +L+ + + RF++L+R++ I+ +L R L L + +V + D+ +P
Sbjct: 15 IGGKWKPCILYRLQN-GTFRFSELRRQMPWISEKVLIRQLKELEKDGIVVRTDYGEVPPR 73
Query: 68 VKYQLSSKGKSLMPLLKQINQWGKLYL 94
V Y LS G ++ PL++ + WG+ +L
Sbjct: 74 VDYALSDYGATVGPLMETMAAWGEQHL 100
>gi|147920576|ref|YP_685627.1| predicted transcription regulator [uncultured methanogenic archaeon
RC-I]
gi|110621023|emb|CAJ36301.1| predicted transcription regulator [uncultured methanogenic archaeon
RC-I]
Length = 113
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 6 EVVGGKWRLNVLWVINKYQSIRFNQLKREVNG----ITTIMLTRSLDILITNELVEKVDF 61
+++ G+W+ +LW + + ++RF Q++ E++ IT MLT+ L L + L+ + +
Sbjct: 15 DILSGRWKPLILWAL-RDGTLRFGQIEEELSAYKPNITQRMLTKQLRELENDGLIARKVY 73
Query: 62 QTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+P V+Y L+ + +SLMP+++Q+ WGK ++
Sbjct: 74 PEVPPRVEYTLTERYRSLMPIVEQMYNWGKEHM 106
>gi|84352090|ref|ZP_00977065.1| COG1733: Predicted transcriptional regulators [Burkholderia
cenocepacia PC184]
Length = 116
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
++ +VG KW + ++ V+ + + RFN++KR V GI+ MLTR+L L + +V + + T
Sbjct: 1 MLAIVGDKWTVMIVRVLVE-RPHRFNEIKRTVGGISQQMLTRTLKALERDGMVSRTVYPT 59
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+P V+Y L+ G++L ++ + W +L
Sbjct: 60 VPPQVEYALTPLGQALAVPVRALGAWAGEHL 90
>gi|149276777|ref|ZP_01882920.1| hypothetical protein PBAL39_15394 [Pedobacter sp. BAL39]
gi|149232446|gb|EDM37822.1| hypothetical protein PBAL39_15394 [Pedobacter sp. BAL39]
Length = 109
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ ++GG+W++ +L V++K+ RF ++ V I+ +LT L L + L+ + + L
Sbjct: 16 IALIGGRWKVVILHVLSKHAR-RFGEISVRVPSISRKVLTEQLKELEADGLISRKQYNEL 74
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGK 91
P V+Y L+ G+SL PLL I W K
Sbjct: 75 PRKVEYALTEYGESLCPLLAYIAAWTK 101
>gi|113940897|ref|ZP_01426715.1| helix-turn-helix, HxlR type [Herpetosiphon aurantiacus ATCC 23779]
gi|113897424|gb|EAU16468.1| helix-turn-helix, HxlR type [Herpetosiphon aurantiacus ATCC 23779]
Length = 120
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GGKW+ +L+ + + RF+QL+R + IT MLT L L + ++ + + +
Sbjct: 17 IAVIGGKWKCVILFHLCDGKK-RFSQLQRFLPSITQRMLTLQLRELEADGVITRTVYPEV 75
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ G+SL P+L + WG+ Y
Sbjct: 76 PPRVEYALTDFGESLRPILFLMRDWGQEY 104
>gi|110634473|ref|YP_674681.1| transcriptional regulator, HxlR family [Mesorhizobium sp. BNC1]
gi|110285457|gb|ABG63516.1| transcriptional regulator, HxlR family [Mesorhizobium sp. BNC1]
Length = 136
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+S+++ +VG KW + V+ + ++RFN+L+R ++GI+ MLT +L L V +
Sbjct: 29 ISELLSLVGDKWTMQVVKHLGN-GTMRFNELRRAIDGISQKMLTTTLRNLEREGFVTRTI 87
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQW 89
+ T+P V Y+L+ G L+ ++ + +W
Sbjct: 88 YPTIPPRVDYRLTDLGNELLIPIRALAEW 116
>gi|19746970|ref|NP_608106.1| hypothetical protein spyM18_2160 [Streptococcus pyogenes MGAS8232]
gi|19749223|gb|AAL98605.1| hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 112
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+G KW+L +L + K ++RF QLK + ++ +LT L + + LV + + +
Sbjct: 14 LSVIGNKWKLLILRDLLK-GTLRFGQLKSSIGSVSQKVLTAQLRAMEADGLVHREVYAEV 72
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V+Y L+ G SL P+++ ++ WG+ Y
Sbjct: 73 PPRVEYSLTETGLSLAPVIEAMSDWGQTY 101
>gi|13472499|ref|NP_104066.1| hypothetical protein mll2818 [Mesorhizobium loti MAFF303099]
gi|14023245|dbj|BAB49852.1| mll2818 [Mesorhizobium loti MAFF303099]
Length = 132
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
V+E++ KW V+ + K + +R +L R++ GIT ML ++L +L + LV + F
Sbjct: 23 VLEMLASKWVYLVVCALRKGR-LRNGELARKLEGITPKMLAQTLRVLERDGLVRREIFPV 81
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P V+Y+L+ G++L LL QI W +
Sbjct: 82 IPPRVEYELTELGQNLGGLLTQIRAWAE 109
>gi|77958917|ref|ZP_00822943.1| COG1733: Predicted transcriptional regulators [Yersinia
bercovieri ATCC 43970]
Length = 102
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLW-VINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKV 59
M Q +E++ GKW + L+ +I IRF +L+R + IT LTR L LV +
Sbjct: 1 MVQFVELIAGKWAIPTLYRLIVTAAPIRFGELQRAIAPITQKELTRQLRAFEQRGLVNRK 60
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQW 89
+ +P V+Y+++ GK+L P L + QW
Sbjct: 61 IYAEVPPRVEYEITPLGKTLQPTLDSLAQW 90
>gi|111224684|ref|YP_715478.1| putative transcriptional regulator with DNA-binding Winged helix
domain [Frankia alni ACN14a]
gi|111152216|emb|CAJ63946.1| putative transcriptional regulator with DNA-binding Winged helix
domain [Frankia alni ACN14a]
Length = 132
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 51/92 (55%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
QV++ + GKW + ++ + ++R+ +L R + G++ MLT++L L T+ V +
Sbjct: 20 QVLDHIAGKWTVLIVDALLSDGTMRYTELARRIEGVSQKMLTQTLRALETDGFVTRTVHP 79
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
T P HV Y L+ G SL + + +W + ++
Sbjct: 80 TSPPHVDYTLTPLGHSLAEPITALRRWTETHI 111
>gi|126347573|emb|CAJ89285.1| putative transcriptional regulator [Streptomyces ambofaciens ATCC
23877]
Length = 110
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 53/94 (56%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ + V+GGKW+ +L+ + + +RF +L+R V GI+ +L L + T+ LV +
Sbjct: 10 LDAAIAVMGGKWKGLILFSLGEEGPLRFGELRRAVPGISERILILQLREMETSGLVHRKV 69
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+ +P V+Y L+ G SL L + +WG+ ++
Sbjct: 70 YHQVPPKVEYSLTDFGNSLNTALAPLGEWGEDHM 103
>gi|89052852|ref|YP_508303.1| putative transcriptional regulator [Jannaschia sp. CCS1]
gi|88862401|gb|ABD53278.1| putative transcriptional regulator [Jannaschia sp. CCS1]
Length = 139
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 6 EVVGGKWRLNVLWVINKYQSIRFNQLKRE-VNG-----ITTIMLTRSLDILITNELVEKV 59
++VGG+++L++L V+++ +RF ++ R V G +T +L+R L + L+++
Sbjct: 34 KIVGGRYKLHILCVLHR-GPLRFGEIGRSLVKGGLGKPVTPRILSRELKDMTELGLLDRK 92
Query: 60 DFQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
++ +P V+Y L +GK+L+P+L +I +WG
Sbjct: 93 EYPVVPKKVEYALGPRGKALLPILSEIVRWG 123
>gi|68055442|ref|ZP_00539587.1| Protein of unknown function DUF24 [Exiguobacterium sibiricum
255-15]
gi|68007948|gb|EAM87187.1| Protein of unknown function DUF24 [Exiguobacterium sibiricum
255-15]
Length = 99
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+++ + ++GGKWR L+ + RF +L+R + GI+ +LT L L +VE+++
Sbjct: 8 VNRALAIIGGKWRPQ-LYCTLEDGPKRFLELQRAIPGISRKVLTDQLKELERLGMVERIE 66
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
F LHV+Y+L+ +L P +K + WG+
Sbjct: 67 FDEAVLHVEYRLTDAAYTLQPAIKGLCAWGE 97
>gi|90569658|gb|ABD94728.1| putative transcriptional regulator [Pseudomonas aeruginosa]
Length = 141
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+S V+ G KW + ++ ++ +RFN+LKR + I+ MLT +L L + LV +
Sbjct: 23 ISSVLSRAGDKWSVIIIVMLGP-GPLRFNELKRMIGSISQRMLTLTLRGLERDGLVTRTQ 81
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
F T+P V Y+L+ G SL+ ++ + W K ++
Sbjct: 82 FSTIPPRVDYELTEMGHSLLIAVQPLGSWAKAHV 115
>gi|19704567|ref|NP_604129.1| Transcriptional regulator, MarR family [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|19714857|gb|AAL95428.1| Transcriptional regulator, MarR family [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 113
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQS-IRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
+ ++GGK+++ +++ + + +R+N+LKR + I+ LT +L L + ++ + ++
Sbjct: 22 LSLIGGKYKMIIIYKLYENSPFMRYNELKRSIGNISFKTLTSTLKELEEDNIIIRKEYPQ 81
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGK 91
+P V+Y LS KG++L+P+L + WG+
Sbjct: 82 IPPRVEYSLSKKGRTLIPILNMMCDWGE 109
>gi|89899095|ref|YP_521566.1| putative transcriptional regulator [Rhodoferax ferrireducens T118]
gi|89343832|gb|ABD68035.1| putative transcriptional regulator [Rhodoferax ferrireducens DSM
15236]
Length = 128
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 54/91 (59%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+ V+E +G +W + VL+ + +QS+RF+ LK + I+ ML+++L L + LV +
Sbjct: 16 IRDVLERMGDRWSMLVLFTLGDHQSLRFSVLKTTIGDISQRMLSQTLRRLEQDGLVLRTA 75
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWGK 91
T+P V Y+L++ G+S + ++ + W +
Sbjct: 76 HATVPPRVDYELTALGQSFLLPMRNLLHWAE 106
>gi|65317055|ref|ZP_00390014.1| COG1733: Predicted transcriptional regulators [Bacillus anthracis
str. A2012]
Length = 119
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+EV+GGKW++ +L + K + R ++LKR + GIT MLT+ L L + ++++ + +
Sbjct: 17 LEVIGGKWKVVILCHLTK-GTKRTSELKRSMPGITQKMLTQQLRELEDDGVIQRKVYNQV 75
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ G SL +L + WG+ +L
Sbjct: 76 PPKVEYSLTDYGWSLESILDSLCSWGECHL 105
>gi|30021508|ref|NP_833139.1| Transcriptional regulator, MarR family [Bacillus cereus ATCC 14579]
gi|29897063|gb|AAP10340.1| Transcriptional regulator, MarR family [Bacillus cereus ATCC 14579]
Length = 115
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+EV+GGKW++ +L + K + R ++LKR + GIT MLT+ L L + ++++ + +
Sbjct: 12 LEVIGGKWKVVILCHLKK-GTKRTSELKRLMPGITQKMLTQQLRELEEDGVIQRKVYDQV 70
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ G SL +L + WG+++L
Sbjct: 71 PPKVEYSLTDYGSSLGAILDSLCSWGEVHL 100
>gi|52142133|ref|YP_084697.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
gi|51975602|gb|AAU17152.1| transcriptional regulator, MarR family [Bacillus cereus E33L]
Length = 114
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+EV+GGKW++ +L + K + R ++LKR + GIT MLT+ L L + ++++ + +
Sbjct: 12 LEVIGGKWKVVILCHLKK-GTKRTSELKRLMPGITQKMLTQQLRELEEDGVIQRKVYDQV 70
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ G SL +L + WG+++L
Sbjct: 71 PPKVEYSLTDYGSSLGAILDSLCSWGEVHL 100
>gi|109646653|ref|ZP_01370557.1| transcriptional regulator, HxlR family [Desulfitobacterium
hafniense DCB-2]
gi|109641899|gb|EAT51453.1| transcriptional regulator, HxlR family [Desulfitobacterium
hafniense DCB-2]
Length = 111
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 6 EVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTLP 65
+++ GKW L +++ ++ +++RFN+L+R + +T LT+ L ++ N L+ + + +P
Sbjct: 16 KLLTGKWTLLIMYHLS-LKTMRFNELQRALPSLTQATLTKQLRMMSDNGLIIRTVYDQIP 74
Query: 66 LHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
V+Y LS G+ P+L I +WG Y+
Sbjct: 75 PKVEYSLSDLGERFQPVLNAIQEWGTEYI 103
>gi|75760209|ref|ZP_00740265.1| Transcriptional regulator, MarR family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74492295|gb|EAO55455.1| Transcriptional regulator, MarR family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 114
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+EV+GGKW++ +L + K + R ++LKR + GIT MLT+ L L + ++++ + +
Sbjct: 12 LEVIGGKWKVVILCHLKK-GTKRTSELKRLMPGITQKMLTQQLRELEEDGVIQRKIYDQV 70
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
P V+Y L+ G SL +L + WG+++L
Sbjct: 71 PPKVEYSLTDYGSSLGAILDSLCSWGEVHL 100
>gi|118051583|ref|ZP_01520131.1| transcriptional regulator, HxlR family [Comamonas testosteroni
KF-1]
gi|118000926|gb|EAV15082.1| transcriptional regulator, HxlR family [Comamonas testosteroni
KF-1]
Length = 150
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 5 MEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQTL 64
+ V+GG W+ +L+ + + RF +L R + GIT MLT L L +VE+ + +
Sbjct: 34 LSVMGGTWKPIILFQL-LHGKKRFGELSRAIPGITQRMLTLQLRELEEAGIVERTVYAEV 92
Query: 65 PLHVKYQLSSKGKSLMPLLKQINQWGKLY 93
P V Y L+ G+SL P+L + WG Y
Sbjct: 93 PPRVDYALTELGRSLQPVLIAMRNWGIAY 121
>gi|83748904|ref|ZP_00945914.1| Hypothetical Protein RRSL_01015 [Ralstonia solanacearum UW551]
gi|83724403|gb|EAP71571.1| Hypothetical Protein RRSL_01015 [Ralstonia solanacearum UW551]
Length = 134
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
++ +G KW + V+ ++ +RFN + R ++GI+ MLT +L L + LV++ + T
Sbjct: 26 ILNRIGDKWTVMVIGTLSN-GPMRFNAIMRAISGISHRMLTLTLRGLEQDGLVKRTAYAT 84
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWG 90
+P V+Y+L+ G SL+ L+ + +W
Sbjct: 85 IPPKVEYELTELGLSLIEPLRALGEWA 111
>gi|153897119|ref|ZP_02017687.1| transcriptional regulator, HxlR family [Methylobacterium extorquens
PA1]
gi|151591969|gb|EDN55375.1| transcriptional regulator, HxlR family [Methylobacterium extorquens
PA1]
Length = 135
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
V+ +G KW + V+ ++ RFN+LKR + GI+ MLT +L L + LV + F T
Sbjct: 28 VLARIGDKWSVLVVMMLGDGPR-RFNELKRMIGGISQRMLTFTLRGLERDGLVTRTIFPT 86
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+P V Y+L+ G+SL ++ + W +L
Sbjct: 87 IPPRVDYELTELGRSLREPIQALGAWAFAHL 117
>gi|156451300|ref|ZP_02057677.1| transcriptional regulator, HxlR family [Methylobacterium
chloromethanicum CM4]
gi|156190063|gb|EDO22255.1| transcriptional regulator, HxlR family [Methylobacterium
chloromethanicum CM4]
Length = 135
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 4 VMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQT 63
V+ +G KW + V+ ++ RFN+LKR + GI+ MLT +L L + LV + F T
Sbjct: 28 VLARIGDKWSVLVVMMLGDGPR-RFNELKRMIGGISQRMLTFTLRGLERDGLVTRTIFPT 86
Query: 64 LPLHVKYQLSSKGKSLMPLLKQINQWGKLYL 94
+P V Y+L+ G+SL ++ + W +L
Sbjct: 87 IPPRVDYELTELGRSLREPIQALGAWAFAHL 117
>gi|87307250|ref|ZP_01089395.1| probable transcriptional regulator [Blastopirellula marina DSM
3645]
gi|87289990|gb|EAQ81879.1| probable transcriptional regulator [Blastopirellula marina DSM
3645]
Length = 135
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+++ + KW L ++ +++Y RFNQL+R V GI+ +LT+SL L ++ L+++ +
Sbjct: 24 EIIARIADKWTLLIIEALHEYPDARFNQLQRMVEGISQKVLTQSLRQLESDGLIQRTAYA 83
Query: 63 TLPLHVKYQLSSKGKSL 79
P V+Y+L+ G+SL
Sbjct: 84 ETPPRVEYKLTPLGESL 100
>gi|92114681|ref|YP_574609.1| putative transcriptional regulator [Chromohalobacter salexigens DSM
3043]
gi|91797771|gb|ABE59910.1| putative transcriptional regulator [Chromohalobacter salexigens DSM
3043]
Length = 137
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 3 QVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVDFQ 62
+V+ G +W V+ + + +R +++R + G+T MLTR+L L + L+ + D Q
Sbjct: 30 EVLSHAGNRWAFGVIHSLKEGGKLRHAEIRRRLGGVTQRMLTRTLRQLERDGLIHRQDHQ 89
Query: 63 TLPLHVKYQLSSKGKSLMPLLKQINQW 89
+P HV+Y+L+ G+ LLK I W
Sbjct: 90 EVPPHVEYELTRLGEEF--LLKIIPMW 114
>gi|115373208|ref|ZP_01460509.1| transcriptional regulatory protein [Stigmatella aurantiaca DW4/3-1]
gi|115369809|gb|EAU68743.1| transcriptional regulatory protein [Stigmatella aurantiaca DW4/3-1]
Length = 140
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
++Q + ++ KW L VL V+ + + R+++L+R++ G++ MLT++L L NELV +
Sbjct: 34 VNQALVLLADKWALLVLIVLMQ-GTKRYSELQRQIRGVSPKMLTQTLRSLEENELVARQV 92
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQWG 90
F +P V+Y L++ GKSL L + W
Sbjct: 93 FPEVPPRVEYSLTAFGKSLSHPLAALCDWA 122
>gi|68055783|ref|ZP_00539924.1| Protein of unknown function DUF24 [Exiguobacterium sibiricum
255-15]
gi|68007629|gb|EAM86879.1| Protein of unknown function DUF24 [Exiguobacterium sibiricum
255-15]
Length = 115
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 MSQVMEVVGGKWRLNVLWVINKYQSIRFNQLKREVNGITTIMLTRSLDILITNELVEKVD 60
+++ ++ GKW++ +LW ++ + RF++L++ + GI+ +LTR L L + ++ +
Sbjct: 19 VTRAQTIMAGKWKIVLLWHLST-GTKRFHELEQLLPGISKGILTRQLRELEADSMINRRV 77
Query: 61 FQTLPLHVKYQLSSKGKSLMPLLKQINQW 89
++ +P V+Y L+ G S +P+L Q+ W
Sbjct: 78 YREIPPKVEYSLTEIGHSFLPILDQMAAW 106
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.322 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,829,961
Number of Sequences: 5470121
Number of extensions: 8872316
Number of successful extensions: 25492
Number of sequences better than 1.0e-05: 383
Number of HSP's better than 0.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 25172
Number of HSP's gapped (non-prelim): 383
length of query: 94
length of database: 1,894,087,724
effective HSP length: 64
effective length of query: 30
effective length of database: 1,543,999,980
effective search space: 46319999400
effective search space used: 46319999400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 124 (52.4 bits)