1: Vwa5a von Willebrand factor A domain containing 5A [ Rattus norvegicus ]
GeneID: 301097 updated 21-Dec-2008 - Official Symbol
- Vwa5aprovided by RGD
- Official Full Name
- von Willebrand factor A domain containing 5Aprovided by RGD
- Primary source
- RGD:735145
- See related
- Ensembl:ENSRNOG00000000195
- Gene type
- protein coding
- RefSeq status
- PROVISIONAL
- Organism
- Rattus norvegicus
- Lineage
- Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
- Also known as
- masa-1; Loh11cr2a; Vwa5a
- Summary
- human homolg is a putative tumor suppressor gene [RGD]
[Top][Help]Genomic regions, transcripts, and products
chromosome: 8; Location: 8q22See Vwa5a in MapViewer
[Top][Help]General gene informationGeneOntology Provided by RGD
[Top][Help]General protein information- Preferred Names
- von Willebrand factor A domain containing 5A
- Names
- von Willebrand factor A domain containing 5A
- mast cell surface antigen-1
- loss of heterozygosity, 11, chromosomal region 2, gene A homolog
[Top][Help]NCBI Reference Sequences (RefSeq)RefSeqs maintained independently of Annotated Genomes
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
NM_198755.1→NP_942050.1 von Willebrand factor A domain containing 5A
- Source sequence(s)
- AB121446
- UniProtKB/Swiss-Prot
- Q75WE7
- Conserved Domains (2) summary
- cd01461
Location:278–456 Blast Score:479
- vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to...
- cl02699
Location:1–131 Blast Score:376
- VIT; Vault protein inter-alpha-trypsin
RefSeqs of Annotated Genomes: Build 4.1
The following sections contain reference sequences that belong to a specific genome build. Explain This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.
Reference assembly
Genomic
NC_005107.2 Reference assembly
- Range
- 40850240..40884975
- Download
- GenBank FASTA Sequence Viewer (Graphics)
Reference assembly (based on RGSC v3.4)
Genomic
NW_047799.2 Reference assembly (based on RGSC v3.4)
- Range
- 10469464..10504199
- Download
- GenBank FASTA Sequence Viewer (Graphics)
Alternate assembly (based on Celera assembly)
Genomic
NW_001084889.1 Alternate assembly (based on Celera assembly)
- Range
- 594853..612850
- Download
- GenBank FASTA Sequence Viewer (Graphics)
mRNA and Protein(s)
XM_001060157.1→XP_001060157.1
- Conserved Domains (2) summary
- cl00057
Location:278–473 Blast Score:244
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...
- cl02699
Location:1–131 Blast Score:377
- VIT; Vault protein inter-alpha-trypsin
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