Official Symbol

Vwa5aprovided by RGD

Official Full Name

von Willebrand factor A domain containing 5Aprovided by RGD

Primary source

RGD:735145

See related

Ensembl:ENSRNOG00000000195

Gene type

protein coding

RefSeq status

PROVISIONAL

Organism

Rattus norvegicus

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus

Also known as

masa-1; Loh11cr2a; Vwa5a

Summary

human homolg is a putative tumor suppressor gene [RGD]

Go to reference sequence detailsTry our new Sequence Viewer

chromosome: 8; Location: 8q22See Vwa5a in MapViewer

Related Articles in PubMed

GeneRIFs: Gene References Into FunctionWhat's a GeneRIF?

GeneOntology Provided by RGD

Preferred Names

von Willebrand factor A domain containing 5A

Names

von Willebrand factor A domain containing 5A

mast cell surface antigen-1

loss of heterozygosity, 11, chromosomal region 2, gene A homolog

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_198755.1→NP_942050.1 von Willebrand factor A domain containing 5A

   Source sequence(s)

   AB121446

   UniProtKB/Swiss-Prot

   Q75WE7

   Conserved Domains (2) summary

   cd01461
   Location:278–456
   Blast Score:479

   vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to...

   cl02699
   Location:1–131
   Blast Score:376

   VIT; Vault protein inter-alpha-trypsin

RefSeqs of Annotated Genomes: Build 4.1

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference assembly

Genomic

1. NC_005107.2 Reference assembly

   Range

   40850240..40884975

   Download

   GenBank  FASTA Sequence Viewer (Graphics)

Reference assembly (based on RGSC v3.4)

Genomic

1. NW_047799.2 Reference assembly (based on RGSC v3.4)

   Range

   10469464..10504199

   Download

   GenBank  FASTA Sequence Viewer (Graphics)

Alternate assembly (based on Celera assembly)

Genomic

1. NW_001084889.1 Alternate assembly (based on Celera assembly)

   Range

   594853..612850

   Download

   GenBank  FASTA Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_001060157.1→XP_001060157.1

   Conserved Domains (2) summary

   cl00057
   Location:278–473
   Blast Score:244

   vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...

   cl02699
   Location:1–131
   Blast Score:377

   VIT; Vault protein inter-alpha-trypsin

• UCSC UCSC
• UniGene Rn.105620