Vibrio parahaemolyticus RIMD 2210633 chromosome I

Back to Proteome MannDB Browser

184901-185000 (1-100) 185001-185100 (101-200) 185101-185200 (201-300) 185201-185300 (301-400) [185301-185400 (401-500)]
185401-185500 (501-600) 185501-185600 (601-700) 185601-185700 (701-800) 185701-185800 (801-900) 185801-185900 (901-1000)
185901-186000 (1001-1100) 186001-186100 (1101-1200) 186101-186200 (1201-1300) 186201-186300 (1301-1400) 186301-186400 (1401-1500)
186401-186500 (1501-1600) 186501-186600 (1601-1700) 186601-186700 (1701-1800) 186701-186800 (1801-1900) 186801-186900 (1901-2000)
186901-187000 (2001-2100) 187001-187100 (2101-2200) 187101-187200 (2201-2300) 187201-187300 (2301-2400) 187301-187400 (2401-2500)
187401-187500 (2501-2600) 187501-187600 (2601-2700) 187601-187700 (2701-2800) 187701-187800 (2801-2900) 187801-187900 (2901-3000)
187901-187980 (3001-3080)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
185301 hypothetical VP0401 hypothetical protein
unknown
genbank 28897175 NP_796780.1 529 399825 401414
185302 hypothetical VP0402 putative Y4mE
similar to GB:AAB91768.1 (AE000085) percent identity 31 in 332 aa
genbank 28897176 NP_796781.1 473 401699 403120
185303 hypothetical VP0403 hypothetical protein
unknown
genbank 28897177 NP_796782.1 111 403098 403433
185304 hypothetical VP0404 RNA polymerase sigma factor
Binds with the catalytic core of RNA polymerase to produce the holoenzyme
genbank 28897178 NP_796783.1 620 403985 405847
185305 hypothetical VP0405 DNA primase
synthesizes RNA primers at the replication forks
genbank 28897179 NP_796784.1 586 405947 407707
185306 hypothetical VP0406 hypothetical protein
similar to GB:AAF93688.1 (AE004138) percent identity 86 in 147 aa
genbank 28897180 NP_796785.1 147 407856 408299
185307 hypothetical VP0407 30S ribosomal protein S21
Interacts with residues in the 16S gene, protecting the stem-loop structure
genbank 28897181 NP_796786.1 71 408328 408543
185308 hypothetical VP0408 O-sialoglycoprotein endopeptidase
similar to REF:NP_230172.1 (NC_002505) percent identity 89 in 337 aa
genbank 28897182 NP_796787.1 338 408774 409790
185309 hypothetical VP0409 putative beta-ketoadipate enol-lactone hydrolase
similar to GB:AAF93690.1 (AE004138) percent identity 65 in 270 aa
genbank 28897183 NP_796788.1 271 409948 410763
185310 hypothetical VP0410 hypothetical protein
similar to GB:AAF93691.1 (AE004138) percent identity 81 in 195 aa
genbank 28897184 NP_796789.1 203 410785 411396
185311 hypothetical VP0411 putative dihydroneopterin aldolase FolB
similar to GB:AAF93692.1 (AE004138) percent identity 82 in 118 aa
genbank 28897185 NP_796790.1 119 411645 412004
185312 hypothetical VP0412 putative 2-amino-4-hydroxy-6-hydroxymethyldihydr opteridine pyrophosphokinase
similar to GB:AAF93693.1 (AE004138) percent identity 54 in 156 aa
genbank 28897186 NP_796791.1 160 412001 412483
185313 uppP hypothetical VP0413 undecaprenyl pyrophosphate phosphatase
BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
genbank 28897187 NP_796792.1 267 412499 413302
185314 hypothetical VP0414 tRNA nucleotidyltransferase
similar to GB:AAF95588.1 (AE004314) percent identity 73 in 401 aa
genbank 28897188 NP_796793.1 406 413355 414575
185315 hypothetical VP0415 putative general secretion pathway protein A
similar to GB:AAF95587.1 (AE004314) percent identity 51 in 534 aa
genbank 28897189 NP_796794.1 539 414714 416333
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
185316 hypothetical VP0416 putative general secretion pathway protein B
similar to GB:AAF95586.1 (AE004314) percent identity 34 in 227 aa
genbank 28897190 NP_796795.1 227 416333 417016
185317 hypothetical VP0417 hypothetical protein
similar to GB:AAF95585.1 (AE004314) percent identity 66 in 203 aa
genbank 28897191 NP_796796.1 203 417110 417721
185318 hypothetical VP0418 pho4 family protein
similar to GB:AAF95584.1 (AE004314) percent identity 90 in 418 aa
genbank 28897192 NP_796797.1 419 417899 419158
185319 hypothetical VP0419 hypothetical protein
similar to GB:AAF95583.1 (AE004314) percent identity 93 in 228 aa
genbank 28897193 NP_796798.1 228 419289 419975
185320 hypothetical VP0420 hypothetical protein
similar to GB:AAF95582.1 (AE004314) percent identity 73 in 510 aa
genbank 28897194 NP_796799.1 511 420182 421717
185321 hypothetical VP0422 putative potassium channel protein
similar to GB:AAF96107.1 (AE004359) percent identity 33 in 243 aa
genbank 28897195 NP_796800.1 272 421780 422598
185322 hypothetical VP0421 methyl-accepting chemotaxis protein
similar to GB:AAF95581.1 (AE004313) percent identity 79 in 426 aa
genbank 28897196 NP_796801.1 442 422575 423903
185323 hypothetical VP0423 glutamate-ammonia-ligase adenylyltransferase
similar to GB:AAF95580.1 (AE004313) percent identity 76 in 946 aa
genbank 28897197 NP_796802.1 947 424012 426855
185324 hypothetical VP0424 ADP-heptose synthase
similar to EMB:CAC89508.1 (AJ414144) percent identity 68 in 476 aa
genbank 28897198 NP_796803.1 476 426933 428363
185325 tolC hypothetical VP0425 outer membrane channel precursor protein
trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell
genbank 28897199 NP_796804.1 442 428576 429904
185326 hypothetical VP0426 MutT/nudix family protein
similar to GB:AAF95578.1 (AE004313) percent identity 74 in 207 aa
genbank 28897200 NP_796805.1 216 430134 430784
185327 hypothetical VP0427 hypothetical protein
similar to GB:AAF95577.1 (AE004313) percent identity 68 in 147 aa
genbank 28897201 NP_796806.1 147 430784 431227
185328 hypothetical VP0428 cyclic AMP phosphodiesterase
similar to GB:AAF95576.1 (AE004313) percent identity 74 in 267 aa
genbank 28897202 NP_796807.1 268 431289 432095
185329 hypothetical VP0429 hypothetical protein
similar to GB:AAF95575.1 (AE004313) percent identity 72 in 193 aa
genbank 28897203 NP_796808.1 194 432144 432728
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
185330 hypothetical VP0430 DNA topoisomerase IV subunit B
decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
genbank 28897204 NP_796809.1 626 432981 434861
185331 hypothetical VP0431 DNA topoisomerase IV subunit A
decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
genbank 28897205 NP_796810.1 761 434865 437150
185332 hypothetical VP0432 protease DegS
similar to GB:AAF93733.1 (AE004142) percent identity 77 in 354 aa
genbank 28897206 NP_796811.1 354 437194 438258
185333 hypothetical VP0433 protease DO
similar to GB:AAF93734.1 (AE004142) percent identity 81 in 455 aa
genbank 28897207 NP_796812.1 455 438455 439822
185334 hypothetical VP0434 hypothetical protein
similar to GB:AAF93735.1 (AE004142) percent identity 70 in 147 aa
genbank 28897208 NP_796813.1 147 440159 440602
185335 hypothetical VP0435 hypothetical protein
unknown
genbank 28897209 NP_796814.1 41 440642 440767
185336 hypothetical VP0436 hypothetical protein
similar to GB:AAF93736.1 (AE004142) percent identity 68 in 366 aa
genbank 28897210 NP_796815.1 367 440799 441902
185337 hypothetical VP0437 hypothetical protein
unknown
genbank 28897211 NP_796816.1 62 441917 442105
185338 hypothetical VP0438 50S ribosomal protein L13
L13 is associated with the antitermination complex
genbank 28897212 NP_796817.1 142 442155 442583
185339 hypothetical VP0439 30S ribosomal protein S9
Forms a direct contact with the tRNA during translation
genbank 28897213 NP_796818.1 130 442599 442991
185340 hypothetical VP0440 hypothetical protein
unknown
genbank 28897214 NP_796819.1 140 442828 443250
185341 hypothetical VP0441 ubiquinol-cytochrome c reductase, iron-sulfur subunit
similar to GB:AAF93741.1 (AE004143) percent identity 81 in 193 aa
genbank 28897215 NP_796820.1 196 443538 444128
185342 hypothetical VP0442 ubiquinol-cytochrome c reductase, cytochrome b
similar to GB:AAF93742.1 (AE004143) percent identity 94 in 421 aa
genbank 28897216 NP_796821.1 421 444128 445393
185343 hypothetical VP0443 ubiquinol-cytochrome c reductase, cytochrome c1
similar to GB:AAF93743.1 (AE004143) percent identity 81 in 245 aa
genbank 28897217 NP_796822.1 245 445390 446127
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
185344 sspA hypothetical VP0444 stringent starvation protein A
transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation
genbank 28897218 NP_796823.1 211 446224 446859
185345 hypothetical VP0445 stringent starvation protein B
similar to GB:AAF93745.1 (AE004143) percent identity 67 in 160 aa
genbank 28897219 NP_796824.1 160 446876 447358
185346 hypothetical VP0446 putative hemolysin
similar to GB:AAF93746.1 (AE004143) percent identity 59 in 184 aa
genbank 28897220 NP_796825.1 233 447419 448120
185347 hypothetical VP0447 putative phosphoheptose isomerase
similar to GB:AAF93747.1 (AE004143) percent identity 96 in 196 aa
genbank 28897221 NP_796826.1 196 448141 448731
185348 hypothetical VP0448 hypothetical protein
similar to GB:AAF93748.1 (AE004143) percent identity 50 in 118 aa
genbank 28897222 NP_796827.1 121 448735 449100
185349 hypothetical VP0449 putative lipoprotein
similar to GB:AAF93749.1 (AE004143) percent identity 60 in 601 aa
genbank 28897223 NP_796828.1 603 449087 450898
185350 hypothetical VP0450 hypothetical protein
similar to GB:AAF93750.1 (AE004143) percent identity 83 in 286 aa
genbank 28897224 NP_796829.1 287 450967 451830
185351 hypothetical VP0451 hypothetical protein
unknown
genbank 28897225 NP_796830.1 38 452471 452587
185352 mraW hypothetical VP0452 S-adenosyl-methyltransferase
similar to DBJ:BAB40616.1 (AB047584) percent identity 100 in 316 aa
genbank 28897226 NP_796831.1 316 452602 453552
185353 hypothetical VP0453 cell division protein FtsL
similar to GB:AAF95551.1 (AE004310) percent identity 78 in 100 aa
genbank 28897227 NP_796832.1 105 453558 453875
185354 hypothetical VP0454 penicillin-binding protein 3
similar to GB:AAF95550.1 (AE004310) percent identity 74 in 578 aa
genbank 28897228 NP_796833.1 597 453872 455665
185355 murE hypothetical VP0455 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
genbank 28897229 NP_796834.1 493 455726 457207
185356 hypothetical VP0456 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase
similar to GB:AAF95548.1 (AE004310) percent identity 67 in 454 aa
genbank 28897230 NP_796835.1 454 457204 458568
185357 hypothetical VP0457 phospho-N-acetylmuramoyl-pentapeptide- transferase
catalyzes the binding of UDP-N-acetylmuramoyl (pentapeptide) to bactoprenol to produce lipid I in peptidoglycan synthesis
genbank 28897231 NP_796836.1 360 458568 459650
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
185358 murD hypothetical VP0458 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
genbank 28897232 NP_796837.1 437 459690 461003
185359 hypothetical VP0459 cell division protein FtsW
similar to GB:AAF95545.1 (AE004310) percent identity 82 in 396 aa
genbank 28897233 NP_796838.1 398 461022 462218
185360 murG hypothetical VP0460 N-acetylglucosaminyl transferase
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
genbank 28897234 NP_796839.1 355 462205 463272
185361 hypothetical VP0461 UDP-N-acetylmuramate--L-alanine ligase
catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
genbank 28897235 NP_796840.1 490 463280 464752
185362 hypothetical VP0462 cell division protein FtsQ
similar to GB:AAF95542.1 (AE004310) percent identity 69 in 236 aa
genbank 28897236 NP_796841.1 260 464943 465725
185363 ftsA hypothetical VP0463 cell division protein
essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane
genbank 28897237 NP_796842.1 420 465718 466980
185364 hypothetical VP0464 cell division protein FtsZ
GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
genbank 28897238 NP_796843.1 409 467011 468240
185365 hypothetical VP0465 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
catalyzes the formation of UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine from UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine in lipid A biosynthesis
genbank 28897239 NP_796844.1 305 468342 469259
185366 hypothetical VP0466 hypothetical protein
similar to GB:AAF95538.1 (AE004310) percent identity 49 in 155 aa
genbank 28897240 NP_796845.1 151 469342 469797
185367 hypothetical VP0467 translocase
similar to DBJ:BAA33403.1 (AB012226) percent identity 96 in 909 aa
genbank 28897241 NP_796846.1 908 470210 472936
185368 hypothetical VP0468 mutator MutT protein
similar to GB:AAF95535.1 (AE004310) percent identity 65 in 131 aa
genbank 28897242 NP_796847.1 132 473012 473410
185369 hypothetical VP0469 dihydrodipicolinate reductase
catalyzes the formation of 2,3-dihydropicolinate from 2,3,4,5-tetrahydrodipicolinate
genbank 28897243 NP_796848.1 269 473520 474329
185370 hypothetical VP0470 carbamoyl-phosphate synthase small subunit
Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate
genbank 28897244 NP_796849.1 379 474811 475950
185371 carB hypothetical VP0471 carbamoyl-phosphate synthase large subunit
composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate; binds manganese; involved in pyrimidine synthesis
genbank 28897245 NP_796850.1 1077 475967 479200
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
185372 hypothetical VP0472 hypothetical protein
unknown
genbank 28897246 NP_796851.1 140 479757 480179
185373 hypothetical VP0473 hypothetical protein
similar to EMB:CAC92114.1 (AJ414154) percent identity 25 in 175 aa
genbank 28897247 NP_796852.1 263 480176 480967
185374 hypothetical VP0474 hypothetical protein
similar to GB:AAF95527.1 (AE004309) percent identity 77 in 258 aa
genbank 28897248 NP_796853.1 259 481190 481969
185375 hypothetical VP0475 transcriptional regulator, LysR family
similar to GB:AAF95526.1 (AE004309) percent identity 68 in 286 aa
genbank 28897249 NP_796854.1 286 481905 482765
185376 hypothetical VP0476 hypothetical protein
similar to GB:AAF95525.1 (AE004308) percent identity 83 in 206 aa
genbank 28897250 NP_796855.1 206 482898 483518
185377 hypothetical VP0477 hypothetical protein
similar to GB:AAF95524.1 (AE004308) percent identity 60 in 253 aa
genbank 28897251 NP_796856.1 275 483590 484417
185378 hypothetical VP0478 adenosylcobinamide-phosphate synthase
catalyzes the formation of adenosylcobinamide-phosphate from adenosylcobyric acid
genbank 28897252 NP_796857.1 317 484414 485367
185379 hypothetical VP0479 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
genbank 28897253 NP_796858.1 231 485380 486075
185380 hypothetical VP0480 hypothetical protein
similar to GB:AAF95521.1 (AE004308) percent identity 62 in 135 aa
genbank 28897254 NP_796859.1 142 486138 486566
185381 hypothetical VP0481 glutamate synthase, small subunit
similar to GB:AAF95520.1 (AE004308) percent identity 90 in 470 aa
genbank 28897255 NP_796860.1 470 486658 488070
185382 hypothetical VP0482 glutamate synthase, large subunit
similar to GB:AAF95519.1 (AE004308) percent identity 89 in 1487 aa
genbank 28897256 NP_796861.1 1487 488092 492555
185383 hypothetical VP0483 glutamate synthase, small subunit
similar to GB:AAF95517.1 (AE004307) percent identity 89 in 489 aa
genbank 28897257 NP_796862.1 489 493007 494476
185384 hypothetical VP0484 glutamate synthase, large subunit
similar to GB:AAF95516.1 (AE004307) percent identity 88 in 1517 aa
genbank 28897258 NP_796863.1 1583 494476 499227
185385 hypothetical VP0485 hypothetical protein
similar to GB:AAF95514.1 (AE004307) percent identity 80 in 312 aa
genbank 28897259 NP_796864.1 319 499581 500540
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
185386 hypothetical VP0486 sensory box/GGDEF family protein
similar to GB:AAF95513.1 (AE004307) percent identity 54 in 540 aa
genbank 28897260 NP_796865.1 581 500575 502320
185387 hypothetical VP0487 sensor histidine kinase FexB
similar to GB:AAF95512.1 (AE004307) percent identity 78 in 782 aa
genbank 28897261 NP_796866.1 783 502547 504898
185388 hypothetical VP0488 putative DNA polymerase III, beta chain
unknown
genbank 28897262 NP_796867.1 154 504900 505364
185389 hypothetical VP0489 aerobic respiration control protein FexA
similar to GB:AAF95511.1 (AE004307) percent identity 94 in 238 aa
genbank 28897263 NP_796868.1 238 505432 506148
185390 hypothetical VP0490 hypothetical protein
unknown
genbank 28897264 NP_796869.1 43 506121 506252
185391 hypothetical VP0491 hypothetical protein
similar to GB:AAF95510.1 (AE004307) percent identity 50 in 117 aa
genbank 28897265 NP_796870.1 135 506509 506916
185392 hypothetical VP0492 ribonuclease activity regulator protein RraA
regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
genbank 28897266 NP_796871.1 160 506970 507452
185393 hypothetical VP0493 hypothetical protein
similar to GB:AAF95508.1 (AE004307) percent identity 50 in 157 aa
genbank 28897267 NP_796872.1 159 507449 507928
185394 thrA hypothetical VP0494 bifunctional aspartokinase I/homeserine dehydrogenase I
multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
genbank 28897268 NP_796873.1 819 508533 510992
185395 hypothetical VP0495 homoserine kinase
catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
genbank 28897269 NP_796874.1 318 511013 511969
185396 hypothetical VP0496 threonine synthase
catalyzes the formation of L-threonine fromO-phospho-L-homoserine
genbank 28897270 NP_796875.1 426 511966 513246
185397 hypothetical VP0497 formate acetyl transferase-related protein
similar to GB:AAF95504.1 (AE004306) percent identity 90 in 125 aa
genbank 28897271 NP_796876.1 125 513386 513763
185398 hypothetical VP0498 endonuclease IV
Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sites to produce new 5' ends that are base-free deoxyribose 5-phosphate residues
genbank 28897272 NP_796877.1 295 514090 514977
185399 hypothetical VP0499 hypothetical protein
unknown
genbank 28897273 NP_796878.1 38 515051 515167
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
185400 hypothetical VP0500 uracil-DNA glycosylase
Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
genbank 28897274 NP_796879.1 226 515261 515941


Back to Proteome MannDB Browser

For information/concerns on this page or tool-set, or to make suggestions regarding usability, contact PPI Group


LLNL Disclaimers
UCRL-WEB-219375