BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= TDE2405
(444 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42527906|ref|NP_973004.1| hypothetical protein TDE2405 [... 876 0.0
gi|67924207|ref|ZP_00517648.1| similar to Zn-dependent prot... 366 2e-99
gi|23126191|ref|ZP_00108095.1| COG0312: Predicted Zn-depend... 366 2e-99
gi|17228584|ref|NP_485132.1| hypothetical protein all1089 [... 359 2e-97
gi|42522285|ref|NP_967665.1| predicted Zn-dependent proteas... 358 3e-97
gi|75909924|ref|YP_324220.1| hypothetical protein Ava_3720 ... 357 6e-97
gi|126661171|ref|ZP_01732248.1| hypothetical protein CY0110... 353 1e-95
gi|22297907|ref|NP_681154.1| hypothetical protein tlr0364 [... 353 1e-95
gi|119509996|ref|ZP_01629137.1| hypothetical protein N9414_... 350 1e-94
gi|53804930|ref|YP_113257.1| hypothetical protein MCA0754 [... 319 3e-85
gi|104783926|ref|YP_610424.1| hypothetical protein PSEEN500... 296 2e-78
gi|77461467|ref|YP_350974.1| hypothetical protein Pfl_5246 ... 291 9e-77
gi|126442689|ref|YP_001064233.1| hypothetical protein BURPS... 287 1e-75
gi|26991628|ref|NP_747053.1| hypothetical protein PP_4950 [... 286 2e-75
gi|70733055|ref|YP_262828.1| hypothetical protein PFL_5770 ... 285 4e-75
gi|126358365|ref|ZP_01715364.1| conserved hypothetical prot... 285 5e-75
gi|148550025|ref|YP_001270127.1| Zn-dependent protease-like... 283 2e-74
gi|78066465|ref|YP_369234.1| Zn-dependent protease [Burkhol... 282 3e-74
gi|91782837|ref|YP_558043.1| hypothetical protein Bxe_A2988... 281 5e-74
gi|53723329|ref|YP_112314.1| family U62 unassigned peptidas... 277 9e-73
gi|66047992|ref|YP_237833.1| hypothetical protein Psyr_4768... 276 2e-72
gi|82534399|ref|ZP_00893434.1| hypothetical protein Bpse110... 276 2e-72
gi|134281882|ref|ZP_01768589.1| conserved hypothetical prot... 276 2e-72
gi|119856509|ref|ZP_01637942.1| conserved hypothetical prot... 276 2e-72
gi|76818715|ref|YP_336615.1| hypothetical protein BURPS1710... 276 2e-72
gi|99908507|ref|ZP_01316190.1| hypothetical protein Bpse1_0... 276 3e-72
gi|84326857|ref|ZP_00974881.1| COG0312: Predicted Zn-depend... 273 2e-71
gi|15597726|ref|NP_251220.1| hypothetical protein PA2530 [P... 272 3e-71
gi|67640396|ref|ZP_00439204.1| COG0312: Predicted Zn-depend... 272 3e-71
gi|53715907|ref|YP_106576.1| hypothetical protein BMAA2065 ... 272 3e-71
gi|116050474|ref|YP_790707.1| putative protease [Pseudomona... 271 7e-71
gi|84320763|ref|ZP_00969132.1| COG0312: Predicted Zn-depend... 270 2e-70
gi|107101977|ref|ZP_01365895.1| hypothetical protein PaerPA... 270 2e-70
gi|71735178|ref|YP_276898.1| predicted Zn-dependent proteas... 268 4e-70
gi|28867638|ref|NP_790257.1| hypothetical protein PSPTO_040... 268 4e-70
gi|118039076|ref|ZP_01510478.1| conserved hypothetical prot... 268 7e-70
gi|146305785|ref|YP_001186250.1| Zn-dependent protease-like... 264 9e-69
gi|152988910|ref|YP_001348066.1| hypothetical protein PSPA7... 257 1e-66
gi|146282083|ref|YP_001172236.1| predicted Zn-dependent pro... 256 3e-66
gi|34498151|ref|NP_902366.1| hypothetical protein CV_2696 [... 252 3e-65
gi|67156493|ref|ZP_00418086.1| conserved hypothetical prote... 251 9e-65
gi|124266620|ref|YP_001020624.1| hypothetical protein Mpe_A... 233 2e-59
gi|119877160|ref|ZP_01644182.1| peptidase U62, modulator of... 80 3e-13
gi|78045647|ref|YP_361822.1| putative modulator of DNA gyra... 74 2e-11
gi|126648483|ref|ZP_01720970.1| TldD protein [Algoriphagus ... 73 3e-11
gi|21240894|ref|NP_640476.1| TldD protein [Xanthomonas axon... 73 4e-11
gi|119483246|ref|ZP_01618660.1| hypothetical protein L8106_... 70 2e-10
gi|16127056|ref|NP_421620.1| TldD/PmbA family protein [Caul... 70 2e-10
gi|109899792|ref|YP_663047.1| peptidase U62, modulator of D... 69 6e-10
gi|21229571|ref|NP_635488.1| TldD protein [Xanthomonas camp... 69 6e-10
gi|118743644|ref|ZP_01591646.1| Zn-dependent protease [Geob... 69 8e-10
gi|86141411|ref|ZP_01059957.1| TldD protein [Flavobacterium... 69 8e-10
gi|120436286|ref|YP_861972.1| DNA gyrase modulator family p... 68 1e-09
gi|94970792|ref|YP_592840.1| peptidase U62, modulator of DN... 67 3e-09
gi|94498575|ref|ZP_01305129.1| TldD protein [Sphingomonas s... 65 9e-09
gi|86132849|ref|ZP_01051440.1| TldD protein [Cellulophaga s... 64 2e-08
gi|88805073|ref|ZP_01120593.1| TldD/PmbA family protein [Ro... 63 4e-08
gi|124003424|ref|ZP_01688273.1| TldD protein [Microscilla m... 63 4e-08
gi|48477933|ref|YP_023639.1| PmbA protein [Picrophilus torr... 57 2e-06
>gi|42527906|ref|NP_973004.1| hypothetical protein TDE2405 [Treponema denticola ATCC 35405]
gi|41818951|gb|AAS12923.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
Length = 444
Score = 876 bits (2264), Expect = 0.0, Method: Composition-based stats.
Identities = 444/444 (100%), Positives = 444/444 (100%)
Query: 1 MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTF 60
MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTF
Sbjct: 1 MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTF 60
Query: 61 WKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK 120
WKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK
Sbjct: 61 WKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK 120
Query: 121 LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR 180
LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR
Sbjct: 121 LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR 180
Query: 181 GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW 240
GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW
Sbjct: 181 GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW 240
Query: 241 NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKG 300
NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKG
Sbjct: 241 NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKG 300
Query: 301 KLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN 360
KLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN
Sbjct: 301 KLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN 360
Query: 361 WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG 420
WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG
Sbjct: 361 WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG 420
Query: 421 TYGSRSTGGASLPGILVKDFNCTL 444
TYGSRSTGGASLPGILVKDFNCTL
Sbjct: 421 TYGSRSTGGASLPGILVKDFNCTL 444
>gi|67924207|ref|ZP_00517648.1| similar to Zn-dependent proteases and their inactivated homologs
[Crocosphaera watsonii WH 8501]
gi|67853961|gb|EAM49279.1| similar to Zn-dependent proteases and their inactivated homologs
[Crocosphaera watsonii WH 8501]
Length = 447
Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats.
Identities = 186/436 (42%), Positives = 265/436 (60%), Gaps = 1/436 (0%)
Query: 9 FESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHN 68
FE + + +L +L + ++I +GE++ F+RF+ AKVRQ G+V G T RT
Sbjct: 13 FEQLCNILLKQLQSEDYLTIELNGEQTQFIRFNGAKVRQTGIVKDGSIKLTLIANQRTAF 72
Query: 69 FSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIP 128
+F D ++A E L R + LPED Y +PE + TS +Y G LLP +K
Sbjct: 73 ATFPFTGDESTDSQIAVENLNYLRQELPQLPEDTYLVLPENNGTSKEVYPGNLLPVEKSV 132
Query: 129 ETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSG 188
+LSPV DLD GLY+ G I +G S G HWF TE F++DYS+ + + +K ++SG
Sbjct: 133 NEVLSPVSDLDMTGLYTAGSIIRGNANSLGQFHWFATENFIVDYSLITPSEKAVKGIFSG 192
Query: 189 TEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSM 248
W +Y +I+ ++ L P K L PG Y+ + + A+ D+ SW SE S+
Sbjct: 193 ANWEHDKYLGQIKTDKEQFVALEKPSKTLQPGGYRTYFAPAAVADLISMLSWGAISESSL 252
Query: 249 QQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNTLVS 308
++G S+ L L++G + S +F+L ++FS G P FN GE+APE L II +G L NTL+S
Sbjct: 253 RRGDSSLLKLQQG-QTLSPQFSLQENFSKGTVPRFNELGEIAPEILPIINEGNLVNTLIS 311
Query: 309 LRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSAR 368
RT ++Y + +NGA E++RS + GNL + D + L TG+YISN +YLNWSD + R
Sbjct: 312 SRTASEYNLTANGANNYEALRSPELLPGNLAQEDILSTLDTGLYISNLHYLNWSDQTGGR 371
Query: 369 VTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRSTG 428
+TGMTR+AC WVE+G+IVAPI ++R+DESLYN +GENL+ +T TGTYG RS G
Sbjct: 372 ITGMTRYACFWVENGQIVAPIENLRFDESLYNFWGENLVTLTNFREFIPRTGTYGQRSLG 431
Query: 429 GASLPGILVKDFNCTL 444
G PGI+V DF TL
Sbjct: 432 GILTPGIIVNDFQFTL 447
>gi|23126191|ref|ZP_00108095.1| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Nostoc punctiforme PCC 73102]
Length = 448
Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats.
Identities = 183/436 (41%), Positives = 272/436 (62%)
Query: 9 FESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHN 68
F + + +L + E E+ ++ S E+S F RF+ AKVRQ G V G+ T R+
Sbjct: 13 FNRLIETLLIKKAENEQFTVKLSSERSQFTRFNHAKVRQTGCVADGWIELTLMADQRSSV 72
Query: 69 FSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIP 128
F + E D ++A ALQE RD ++LLP D Y +P + TS +++G LLPE+ +
Sbjct: 73 RQFPFTGNWELDWQLAYSALQELRDELILLPIDPYLVLPSGTNTSREVHSGNLLPEEAVV 132
Query: 129 ETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSG 188
++L V +LDF G+Y+ G++ KG S+G HWF T++F LDYS++ +G+ +K ++G
Sbjct: 133 SSVLEQVNELDFTGIYAGGIVIKGYGDSSGQKHWFATDSFTLDYSLFSTSGQAVKGTFAG 192
Query: 189 TEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSM 248
++W+ + Y KI +A+K LE+L P K+L G+YK + + A+ D+ SW SE +
Sbjct: 193 SDWNKSAYIAKISEAKKQLELLARPCKELPRGQYKTYFAPAAVADLLVMLSWGAISEADI 252
Query: 249 QQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNTLVS 308
QQG+SA AL + S F+L ++F GL P FN GE+A +L +IEKG L NTLV+
Sbjct: 253 QQGNSALAALSRQEKQLSPAFSLKENFQRGLVPRFNELGEMAAPELPVIEKGLLVNTLVN 312
Query: 309 LRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSAR 368
RT +Y +NGA SE++R+ I GNL + L TG+Y+SN +YLNWSD + R
Sbjct: 313 SRTAKEYQKTANGANGSETLRAPEISPGNLVFEQILPRLDTGLYLSNLHYLNWSDRQTGR 372
Query: 369 VTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRSTG 428
+TGMTR+AC WVE+G+I+API ++R+DESLY +GENL+ +T GTY SR G
Sbjct: 373 ITGMTRYACFWVENGEIIAPIENLRFDESLYRFWGENLVDLTNFQEFIPEVGTYDSRQLG 432
Query: 429 GASLPGILVKDFNCTL 444
G+ +PG+LV++F TL
Sbjct: 433 GSLVPGMLVENFTYTL 448
>gi|17228584|ref|NP_485132.1| hypothetical protein all1089 [Nostoc sp. PCC 7120]
gi|17130435|dbj|BAB73046.1| all1089 [Nostoc sp. PCC 7120]
Length = 448
Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats.
Identities = 180/444 (40%), Positives = 271/444 (61%), Gaps = 4/444 (0%)
Query: 1 MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTF 60
++ SF + E+ +L + LE E+ ++ S E+S F RF+KAKV Q G V G+ T
Sbjct: 9 LEFSFNQLLET----LLVKKLENEQFTVKLSSERSQFTRFNKAKVCQTGFVADGWIELTL 64
Query: 61 WKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK 120
R+ F + EKD + A +ALQE RD + LLP D Y +P + TS + G
Sbjct: 65 MTDQRSSFRQFPFTGNWEKDWQSAYQALQELRDELPLLPVDPYLVLPSGNNTSRETHIGN 124
Query: 121 LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR 180
+LP + + +L V++LDF G+Y+ G++ + S G HWF T++F LDYS+++ +G+
Sbjct: 125 ILPAEAVVTNVLEQVRELDFTGIYAGGLVIRAYGDSRGQKHWFATDSFTLDYSLFISSGQ 184
Query: 181 GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW 240
+K ++G+ W Y +KI + ++ L++L P K++ G+YK + + A+ D+ SW
Sbjct: 185 AVKGTFAGSSWDQEAYSVKISEGKQQLKLLSNPAKEVPKGQYKTYFAPAAVADLLGMLSW 244
Query: 241 NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKG 300
SE +QQG+SA L + S KF+L ++F LGL P FN GE+A +LSII+KG
Sbjct: 245 GAVSEADLQQGNSALAILSRQDKQLSPKFSLRENFQLGLVPRFNQLGEMAAPELSIIDKG 304
Query: 301 KLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN 360
L NTLV+ RT +Y +NGA SE++R+ + TGNL + L TG+Y+SN +YLN
Sbjct: 305 ILVNTLVNSRTAKEYQKIANGANSSETLRAPEVITGNLTYEQILPSLDTGLYVSNLHYLN 364
Query: 361 WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG 420
WSD + R+TGMTR+AC W+E+G+I+API ++R+DESLY +G+NL+ T G
Sbjct: 365 WSDRPTGRITGMTRYACFWIENGEIIAPIENLRFDESLYRFWGDNLIDFTNFQEFIPEVG 424
Query: 421 TYGSRSTGGASLPGILVKDFNCTL 444
TY SR GG+ +PG+LV DF TL
Sbjct: 425 TYESRQLGGSLVPGMLVNDFTYTL 448
>gi|42522285|ref|NP_967665.1| predicted Zn-dependent protease [Bdellovibrio bacteriovorus HD100]
gi|39574816|emb|CAE78658.1| predicted Zn-dependent protease [Bdellovibrio bacteriovorus HD100]
Length = 463
Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats.
Identities = 180/439 (41%), Positives = 275/439 (62%), Gaps = 1/439 (0%)
Query: 6 KEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNR 65
K+ F +AD +L+ L + E +++ E+S F+RF+ KVRQN V+Q + T K +
Sbjct: 26 KQSFNIVADHLLALLKKDEAANVNLHAEESLFVRFNANKVRQNTHVEQRSLTLTLQKDGK 85
Query: 66 THNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPED 125
T N +F I +++DK+ L +AR LLPED YQ + TS + + G LL ++
Sbjct: 86 TANINFSITGEIDEDKQRVEFWLDQARQECALLPEDPYQVAIVNNGTSDSTFKGSLLKDE 145
Query: 126 KIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSL 185
++ + I +P DFAGLY G I SAG SHWF TE F +DYS+++ + +KS+
Sbjct: 146 EVIKAITTPATGADFAGLYCAGPIISANKNSAGQSHWFATENFFVDYSLYMGE-KAVKSI 204
Query: 186 YSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSE 245
Y+GT W +++ I Q++ L ++ P+K L PG Y+ +++ A+ ++ FSW S
Sbjct: 205 YAGTHWDQKEFEANIAQSKNQLSLMDRPKKVLQPGAYRTYLAPGAVAELASMFSWGALSF 264
Query: 246 RSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNT 305
+ +QG SA + L + + S F++ +++++GL +NS GELAPE L +I G+L +
Sbjct: 265 NAYKQGGSALMKLADKEKSLSPLFSVRENYAMGLTHRYNSLGELAPETLKLISNGQLDSY 324
Query: 306 LVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTS 365
++S R+ +YGV+ N E R++ I G+L + D +KELGTG+Y+SN +YLNWSD
Sbjct: 325 VISSRSAKEYGVEGNAGDSHEGPRAMEILPGSLKKDDILKELGTGLYLSNLHYLNWSDRL 384
Query: 366 SARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSR 425
+AR+TGMTR+AC WVE+G+IVAPIAD+R+DESL++ GENLLAVT + TY SR
Sbjct: 385 NARITGMTRYACFWVENGEIVAPIADLRFDESLFDCLGENLLAVTDFQEVDPMVSTYESR 444
Query: 426 STGGASLPGILVKDFNCTL 444
+ GG +PG+L+KDF TL
Sbjct: 445 ALGGKKVPGMLIKDFKFTL 463
>gi|75909924|ref|YP_324220.1| hypothetical protein Ava_3720 [Anabaena variabilis ATCC 29413]
gi|75703649|gb|ABA23325.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 448
Score = 357 bits (917), Expect = 6e-97, Method: Composition-based stats.
Identities = 179/444 (40%), Positives = 271/444 (61%), Gaps = 4/444 (0%)
Query: 1 MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTF 60
++ SF + E+ +L + LE E+ ++ S E+S F RF++AKVRQ G V G+ T
Sbjct: 9 LEFSFNQLLET----LLVKKLENEQFTVKLSSERSQFTRFNQAKVRQTGFVADGWIELTL 64
Query: 61 WKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK 120
R+ F + EKD + A +ALQE RD + LLP D Y +P + TS + G
Sbjct: 65 MTDQRSSFRQFPFTGNWEKDWQSAYQALQELRDELPLLPVDPYLVLPSGNNTSRETHIGN 124
Query: 121 LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR 180
+LP + + +L V++LDF G+Y+ G++ + S+G HWF T++F LDYS+++ +G+
Sbjct: 125 ILPAEAVVTNVLEQVRELDFTGIYAGGLVIRAYGDSSGQKHWFATDSFTLDYSLFISSGQ 184
Query: 181 GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW 240
+K ++G+ W Y +KI + ++ L++L K++ G+YK + + A+ D+ SW
Sbjct: 185 AVKGTFAGSNWDQEAYSVKINEGKQQLKLLANRAKEVPKGQYKTYFAPAAVADLLSMLSW 244
Query: 241 NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKG 300
SE +QQG+SA L + S KF+L ++F LGL P FN GE+A +LSII+KG
Sbjct: 245 GAVSEADIQQGNSALAILSRQDKQLSPKFSLRENFQLGLVPRFNQLGEMAAPELSIIDKG 304
Query: 301 KLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN 360
L NTLV+ RT +Y +NGA SE++R+ + GNL + L TG+Y+SN +YLN
Sbjct: 305 ILVNTLVNSRTAKEYQKIANGANSSETLRAPEVIPGNLTYEQILPSLDTGLYVSNLHYLN 364
Query: 361 WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG 420
WSD + R+TGMTR+AC W+E+G+I+API ++R+DESLY +GENL+ T G
Sbjct: 365 WSDRPTGRITGMTRYACFWIENGEIIAPIENLRFDESLYRFWGENLIDFTNIQEFIPEVG 424
Query: 421 TYGSRSTGGASLPGILVKDFNCTL 444
TY SR GG+ +PG+LV DF TL
Sbjct: 425 TYESRQLGGSLVPGMLVNDFTYTL 448
>gi|126661171|ref|ZP_01732248.1| hypothetical protein CY0110_20935 [Cyanothece sp. CCY0110]
gi|126617544|gb|EAZ88336.1| hypothetical protein CY0110_20935 [Cyanothece sp. CCY0110]
Length = 447
Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats.
Identities = 178/436 (40%), Positives = 266/436 (61%), Gaps = 1/436 (0%)
Query: 9 FESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHN 68
F+ + + ++ +L E ++I SGE++ F+RF+ AKVRQ G+V G T RT
Sbjct: 13 FQQLCNLLIDKLQSEEYLTIELSGEQTQFIRFNSAKVRQTGIVKDGSIKLTLIANQRTAF 72
Query: 69 FSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIP 128
+F D R+A E L R + LPED++ +P+ + T+ +Y GKLL +K
Sbjct: 73 ATFPFTGDETVDNRIAVENLNYLRQELPQLPEDQHIVLPKNNGTTREVYPGKLLSTEKAV 132
Query: 129 ETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSG 188
+ IL PV +LD GLY+ G + +G SAG HWF TE +++DYS+ + +K ++SG
Sbjct: 133 KEILCPVSELDMTGLYTAGSMIRGNSNSAGQFHWFATENYIVDYSLITPEEKAVKGIFSG 192
Query: 189 TEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSM 248
W +Y +++ +K L K + PG Y+ + + A+ D+ SW G SE S+
Sbjct: 193 QNWDHDKYLEQLKTDKKQFFALEKLSKTIKPGGYRTYFAPAAVADLISMLSWGGISESSL 252
Query: 249 QQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNTLVS 308
++G S+ L L++G+ S +F+L ++FS G P FN GE+APE L II +G L NTL+S
Sbjct: 253 RRGDSSLLKLQQGKT-LSPQFSLQENFSKGTVPRFNELGEIAPEILPIITEGNLVNTLIS 311
Query: 309 LRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSAR 368
RT ++Y + +NGA ES+RS + GNL++ D + L TG+Y+SN +YLNWSD + R
Sbjct: 312 SRTASEYNLTANGANNYESLRSPELLPGNLSQEDILSTLNTGLYVSNLHYLNWSDRTGGR 371
Query: 369 VTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRSTG 428
+TGMTR+AC WVE+G+IVAPI ++R+DESLY +GENL+ +T TGTYG R+ G
Sbjct: 372 ITGMTRYACFWVENGEIVAPIENLRFDESLYRFWGENLVTLTNFREFIPRTGTYGQRNLG 431
Query: 429 GASLPGILVKDFNCTL 444
G PG++V DF TL
Sbjct: 432 GILTPGMIVNDFQFTL 447
>gi|22297907|ref|NP_681154.1| hypothetical protein tlr0364 [Thermosynechococcus elongatus BP-1]
gi|22294085|dbj|BAC07916.1| tlr0364 [Thermosynechococcus elongatus BP-1]
Length = 440
Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats.
Identities = 182/444 (40%), Positives = 267/444 (60%), Gaps = 4/444 (0%)
Query: 1 MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTF 60
M + F+ + ++ + + L GE + + + E S F+RF++A+VRQ G V+ +
Sbjct: 1 MTLEFRAA-QHLSHELFAALKPGEALFVEIASESSQFIRFNRARVRQIGTVEDTQVTLRL 59
Query: 61 WKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK 120
+ RT + SF + + D A E L + R + LP D Y P + + Y G+
Sbjct: 60 QLQQRTASTSFPYRGT--ADLAAALEYLAQLRSETVQLPVDPYLVPPTDTGSIQDTYLGR 117
Query: 121 LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR 180
L D + ETIL PV+DLDF G+YS G I +G SAG HWF TETF LDYS++ + G+
Sbjct: 118 LPDPDSVVETILKPVQDLDFVGIYSGGTIARGSFNSAGQEHWFATETFCLDYSLFTDTGK 177
Query: 181 GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW 240
+K+ Y+ T W A Y+ +I R+ L L P ++L PG+Y+ + + A+ ++ SW
Sbjct: 178 AVKNSYASTHWDTATYETQIASDRQQLAQLAQPPRQLPPGRYRTYFAPAAVAELVGMLSW 237
Query: 241 NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKG 300
SE + +QG SA L+EG S F+L +DF+ G P FNS+G++AP LS+IE+G
Sbjct: 238 GAVSEAAYRQGGSALAKLREGVT-LSPLFSLQEDFTSGTVPRFNSDGDIAPPYLSLIERG 296
Query: 301 KLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN 360
+L+ L+S RT +Y + +NGA ES+RS ++ G L D + L TG+Y+ N +YLN
Sbjct: 297 QLQTLLISRRTAQEYNLVANGANRQESLRSPLVLAGTLPAVDVLAALDTGLYVGNLHYLN 356
Query: 361 WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG 420
WSD + R+TGMTR+AC WVE GKIV PI+D+R+D+SLY+ +G NL A+T ANT
Sbjct: 357 WSDRPNGRITGMTRYACFWVEQGKIVGPISDLRFDDSLYDFWGNNLEALTDTPMWIANTD 416
Query: 421 TYGSRSTGGASLPGILVKDFNCTL 444
TY RS GG ++PG+LVK F TL
Sbjct: 417 TYERRSLGGITVPGMLVKAFQFTL 440
>gi|119509996|ref|ZP_01629137.1| hypothetical protein N9414_20150 [Nodularia spumigena CCY9414]
gi|119465320|gb|EAW46216.1| hypothetical protein N9414_20150 [Nodularia spumigena CCY9414]
Length = 448
Score = 350 bits (897), Expect = 1e-94, Method: Composition-based stats.
Identities = 181/444 (40%), Positives = 269/444 (60%), Gaps = 4/444 (0%)
Query: 1 MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTF 60
+++SF + E+ +L + E E+ ++ S E+S F RF+ KVRQ G+V G T
Sbjct: 9 LEISFNQLIET----LLIKKTETEQFTLKLSSEQSQFTRFNHGKVRQTGLVADGSIELTL 64
Query: 61 WKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK 120
+ R+ SF + + D + A AL E R ++LLP D Y +P + TS I +G+
Sbjct: 65 MEDQRSSFRSFPFTGNWQIDWQTAYTALLELRQELILLPIDPYLVLPSGNNTSREINSGE 124
Query: 121 LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR 180
LL + + T+L V +LDF G+Y+ G++ K S G HWF T+TF LDYS++ G+
Sbjct: 125 LLAAESVVPTLLELVAELDFTGMYAGGIVIKAYGDSQGQKHWFATDTFTLDYSLFDNCGQ 184
Query: 181 GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW 240
+K +++G+ W +A Y KI +A+ LE+L P K+L G+YK + + A+ D+ SW
Sbjct: 185 AVKGIFAGSNWDEAAYMAKINEAKTQLELLSRPAKQLTRGQYKTYFAPAAVADLLGMLSW 244
Query: 241 NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKG 300
+ SE +QQG+SA L + S +F+L ++F G P FN GE+ +L IIEKG
Sbjct: 245 SAVSEADLQQGNSALAMLSRQEKQLSPQFSLKENFQQGFVPRFNQLGEMVAPELPIIEKG 304
Query: 301 KLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN 360
L NTLV+ RT +YG +NGA SE++R+ I GNL + ++ L TG+YISN +YLN
Sbjct: 305 ILVNTLVNSRTAKEYGKAANGANSSETLRAPEISPGNLGFEEILQSLDTGLYISNLHYLN 364
Query: 361 WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG 420
WSD + R+TGMTR+AC WVE+G+I+API ++R+DESLY +G+NL+ T G
Sbjct: 365 WSDRPTGRITGMTRYACFWVENGEIIAPIENLRFDESLYRFWGDNLVEFTNFQEFIPEVG 424
Query: 421 TYGSRSTGGASLPGILVKDFNCTL 444
TY SR GG+ +PG+LV +F TL
Sbjct: 425 TYESRDLGGSLVPGMLVNNFTYTL 448
>gi|53804930|ref|YP_113257.1| hypothetical protein MCA0754 [Methylococcus capsulatus str. Bath]
gi|53758691|gb|AAU92982.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 454
Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats.
Identities = 177/444 (39%), Positives = 250/444 (56%), Gaps = 8/444 (1%)
Query: 9 FESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHN 68
E ++D + L GE +S+S S E ++RF+ KVRQ V Q F ++R
Sbjct: 11 LERLSDHAFAALRPGEALSLSLSAENQTYLRFNTGKVRQATGVRQWRLELDFRARDRQVT 70
Query: 69 FSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIP 128
F+ + +++D R L AR LP D + + E S + ++
Sbjct: 71 FTTDLSGRVDRDHRDLHALLARARSDAASLPPDPFAAPLENPSQSEEWHEVATPDPAEVI 130
Query: 129 ETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRG----IKS 184
E + DFAGL++ G + V S G +HWF T F LDYS++ N G +K
Sbjct: 131 EQVAVATAGTDFAGLFAAGPQIRAVRNSTGQNHWFATSGFFLDYSLFTVNSAGENKAVKG 190
Query: 185 LYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFS 244
L SGT W ++ L IE R L+ L P + LAPG+Y+A+++ A+ V + SW S
Sbjct: 191 LLSGTGWRASELALAIEADRHRLDQLRMPSRTLAPGEYRAYLAPAAVAHVVELLSWGAVS 250
Query: 245 ERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKN 304
+ ++G SA EG S++F+L ++F+LGL P FNS GELAP +L I E+G KN
Sbjct: 251 FGAWKKGGSALRRWIEGEVPLSERFSLRENFALGLGPRFNSLGELAPLQLPIAERGAPKN 310
Query: 305 TLVSLRTETQYGVKSNGAPL----SESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN 360
L R+ +YGV SNGA E +RS I G+L E DA+K L +G+YI N +YLN
Sbjct: 311 LLTGARSAREYGVTSNGAESGLWSEEQLRSAEILPGDLPERDALKRLDSGLYIGNLHYLN 370
Query: 361 WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG 420
WSD SARVTGMTR+AC +E G+IVAPI D+R+D+SLY +FG L A+++E+R+F T
Sbjct: 371 WSDLKSARVTGMTRYACFLIEHGEIVAPIQDLRFDDSLYRIFGTELEALSEETRLFPATE 430
Query: 421 TYGSRSTGGASLPGILVKDFNCTL 444
TYG R+ GG +PGIL+ F TL
Sbjct: 431 TYGQRALGGCKVPGILLSRFRLTL 454
>gi|104783926|ref|YP_610424.1| hypothetical protein PSEEN5006 [Pseudomonas entomophila L48]
gi|95112913|emb|CAK17641.1| conserved hypothetical protein [Pseudomonas]
Length = 443
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 161/445 (36%), Positives = 255/445 (57%), Gaps = 3/445 (0%)
Query: 1 MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTF 60
M +++ FES+ D + + + GE+ ++ +S E+S F+RF+ AKVRQ G+V Q
Sbjct: 1 MSTVYQQRFESLLDSLNAAVQPGEQFTLGYSAEQSQFVRFNHAKVRQAGLVSQASAQLRL 60
Query: 61 WKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK 120
+ R + E D++ +AL + R ++ LLP D Y S+ E++ S ++
Sbjct: 61 VRDGRQAEQQVTLGDDAELDRQRLHDALAQLRQTLPLLPVDPYLSLDESAWHSHSLLEPP 120
Query: 121 LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR 180
L D++ I DLD G+Y+ G IC+G +S GA W Q +F +D+S++ NG+
Sbjct: 121 LPELDEVLALIEREAGDLDLVGIYAAGPICRGFASSFGAFGWHQANSFNIDWSLFHANGQ 180
Query: 181 GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW 240
+K+ Y+G W ++ ++ QAR+ LE L P L PG Y+A+++ A+ ++ W
Sbjct: 181 AVKANYAGQSWRGDKFAKRLRQAREQLEHLGRPAITLKPGTYRAYLAPAAMDEIAGMLCW 240
Query: 241 NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEK-LSIIEK 299
FS +S+ G+SA L G S + ++ S L PAF+ G +P + L +I +
Sbjct: 241 GAFSAQSLATGNSALQRLYNGDARLSPLVSFSEQVSGSLSPAFSDEG--SPRRDLLLIGE 298
Query: 300 GKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYL 359
G+ LVS R+ ++ + +NGA ES ++ + GNL A ++ LGTG+YISN YL
Sbjct: 299 GRGLERLVSARSAAEFKLVANGADSHESPCALSLAPGNLPSAQILERLGTGLYISNLWYL 358
Query: 360 NWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANT 419
N+SD +AR+TG+TRFA WVE+G+I P++ MR+D+SLYN+ G L +T+E + +T
Sbjct: 359 NYSDLPAARMTGLTRFATFWVENGRIQGPVSTMRFDDSLYNLLGSQLEDLTQEREMILST 418
Query: 420 GTYGSRSTGGASLPGILVKDFNCTL 444
TYG RSTG + LPG LVK TL
Sbjct: 419 STYGQRSTGSSHLPGALVKGLTLTL 443
>gi|77461467|ref|YP_350974.1| hypothetical protein Pfl_5246 [Pseudomonas fluorescens PfO-1]
gi|77385470|gb|ABA76983.1| conserved hypothetical protein [Pseudomonas fluorescens PfO-1]
Length = 445
Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats.
Identities = 158/438 (36%), Positives = 247/438 (56%), Gaps = 1/438 (0%)
Query: 7 EYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRT 66
E F+ + +++ + E E+ ++S+ E S F+RF+ AKVRQ G V Q R
Sbjct: 9 EAFKVLVNWLRDAVREPEQFTLSYDAESSAFVRFNHAKVRQAGQVQQAGIGLKLIDDGRH 68
Query: 67 HNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDK 126
+ + D + AE LQ+ R+++ LLP+D Y + S + L ++
Sbjct: 69 ADLHITLSGEQATDLQRLAEGLQQLRETLPLLPQDPYLLLNHNGWQSKNVQEHPLPDTEQ 128
Query: 127 IPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLY 186
+ I + + LD G Y+ G I +G +S+GA W Q +F D+S++ ENG +K+ Y
Sbjct: 129 VVAEIANAAEGLDLVGFYAAGPISRGFASSSGAFGWHQANSFNFDFSLFHENGEAVKASY 188
Query: 187 SGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSER 246
+G +W+ + +I+QAR+ LE L P + L PG+Y+A+++ AL ++ W GFS +
Sbjct: 189 AGHDWNSEDFARRIQQAREQLEFLGRPLRTLPPGQYRAYLAPAALEEIMGMLCWGGFSAQ 248
Query: 247 SMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNTL 306
S+ SS L G + FS +L + S L PAF+ G L +I +GK + L
Sbjct: 249 SIASKSSPLQKLYAGDQAFSPLVSLDEKVSESLSPAFSGEG-YPRSDLRLIIEGKAGDQL 307
Query: 307 VSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSS 366
V R+ +YG+ +NGA ES ++ +G G+L +A+ +K+LGTG+YISN YLN+SD +
Sbjct: 308 VGSRSAAEYGLTANGASGGESPSALNMGAGDLPQAEILKQLGTGLYISNLWYLNFSDQPA 367
Query: 367 ARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRS 426
AR+TGMTRFA WVE+G+I AP++ MR+D+S Y++ G L A+T E + + TY R+
Sbjct: 368 ARLTGMTRFATFWVENGEIQAPVSTMRFDDSAYSLLGSQLEALTAERELLLSASTYSQRN 427
Query: 427 TGGASLPGILVKDFNCTL 444
T A LPG LV TL
Sbjct: 428 TSSALLPGALVSRLTLTL 445
>gi|126442689|ref|YP_001064233.1| hypothetical protein BURPS668_A3242 [Burkholderia pseudomallei 668]
gi|126222180|gb|ABN85685.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
Length = 453
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 152/442 (34%), Positives = 238/442 (53%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD GE + + F+GE S F+RF+ KVRQ G V QG +
Sbjct: 13 IDWHAHFARLADEAEQLRQPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLAS 72
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R +F+ + D A AL R+S+ P+D + +S S G L
Sbjct: 73 GGRQASFAQTVSGDWATDAPELAAALATLRESLRDAPDDPHLLFDTSSWRQSGRRDGSLP 132
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 133 DPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFDFRWSLYDASGRAI 192
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G WSDA + K+++A L L K LAPG+Y+A+++ A+ ++ W+G
Sbjct: 193 KTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPAAVAEIVGLLGWDG 252
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S+ L G F + + +DFSLG+ PAFN++G + + ++ +G+
Sbjct: 253 FSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADG-YRRDSVPLVAEGRS 311
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS RT ++G+ NGA E+ ++ I G L +AD + L TG+YI N YLN+S
Sbjct: 312 VGRLVSARTAREHGLSPNGAAADETPETLSIAGGTLADADVLAALDTGLYIGNLWYLNFS 371
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAP+ MR+D+S+Y + G L + + N ++
Sbjct: 372 DKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLGAAPELLLNDQSW 431
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R TGGA LPG+L + F TL
Sbjct: 432 SERPTGGAKLPGLLARSFELTL 453
>gi|26991628|ref|NP_747053.1| hypothetical protein PP_4950 [Pseudomonas putida KT2440]
gi|24986721|gb|AAN70517.1|AE016693_6 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 439
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 155/440 (35%), Positives = 251/440 (57%), Gaps = 3/440 (0%)
Query: 6 KEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNR 65
K FE++ + + L GE+ ++ +S E+S F+RF+ AKVRQ G V Q + R
Sbjct: 2 KHAFETLVGEVHAALQAGEQFTLGYSAEQSQFVRFNHAKVRQAGEVSQASAQLRLVRDGR 61
Query: 66 THNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPED 125
+ ++ D++ AL++ R ++ LL D Y + E + S ++ L +
Sbjct: 62 QAEQQVTLSGDVQLDRQRLNVALEQLRQTLPLLALDPYLRLDENAWHSHSLQEPPLPALN 121
Query: 126 KIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSL 185
++ + DLD G+Y+ G +C+G +S GA W Q +F +D+S++ +NG+ +K+
Sbjct: 122 EVLALLEREAGDLDLVGIYAAGPVCRGFASSFGAFGWHQANSFNVDWSLFHDNGQAVKAN 181
Query: 186 YSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSE 245
Y+G WS + ++ QAR+ L L P L PG Y+A+++ A+ +V W GFS
Sbjct: 182 YAGQAWSADDFTARLRQAREQLGFLGRPAVTLKPGTYRAYLAPAAMDEVAGMLCWGGFSA 241
Query: 246 RSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPE-KLSIIEKGKLKN 304
+++ G+SA L G S + T+ S L PAF+ G AP + +I++G+ +
Sbjct: 242 QALATGNSALQRLYNGDARLSPLVSFTEQVSGSLSPAFSDEG--APRLDVPLIQQGEARQ 299
Query: 305 TLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDT 364
L+S R+ ++ +++NGA ES ++ + GNL A ++ LGTG+YISN YLN+SD
Sbjct: 300 RLISARSAAEFELQANGADGYESPCALSLAPGNLASAQILERLGTGLYISNLWYLNYSDL 359
Query: 365 SSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGS 424
+AR+TG+TRFA WVEDG+I P++ MR+D+SLY++ G L +T+E + +T TYG
Sbjct: 360 PAARMTGLTRFATFWVEDGQIQGPVSTMRFDDSLYSLLGSQLEDLTQEREMILSTSTYGQ 419
Query: 425 RSTGGASLPGILVKDFNCTL 444
RSTG + LPG LVK TL
Sbjct: 420 RSTGSSHLPGALVKGLTLTL 439
>gi|70733055|ref|YP_262828.1| hypothetical protein PFL_5770 [Pseudomonas fluorescens Pf-5]
gi|68347354|gb|AAY94960.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 445
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 153/436 (35%), Positives = 242/436 (55%), Gaps = 1/436 (0%)
Query: 9 FESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHN 68
F+++ ++ L E E+ ++S++ E S F+RF+ AKVRQ G V Q R +
Sbjct: 11 FKALVQWLKDALRETEQFTLSYAAEASEFIRFNHAKVRQAGQVQQASVHFKLIDNGRHAD 70
Query: 69 FSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIP 128
S + E D++ A+ LQ+ R+++ LLP D Y + S + L +++
Sbjct: 71 LSITLSNDPEVDRQRLADGLQQLRETLPLLPADPYLMLNHTHWQSHHVQDQPLPGSEQVV 130
Query: 129 ETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSG 188
E I LD G+Y+ G I +G +S GA W Q +F D+S++ ENG +K+ Y+G
Sbjct: 131 EEIGRAGAGLDLVGIYAAGPISRGFASSGGAFGWHQANSFNFDFSLFHENGEAVKASYAG 190
Query: 189 TEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSM 248
W + L+ +QAR+ LE L P + LAPG+Y+A+++ AL ++ +W GFS +S+
Sbjct: 191 HAWDSQAFALRFQQAREQLEFLGRPLRTLAPGQYRAYLAPAALEEIMGMLAWGGFSAQSI 250
Query: 249 QQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNTLVS 308
S L G + +L + S L PAF+ G LS+I G L++
Sbjct: 251 ASKHSPLQKLYAGDAALNPLVSLDEQVSGSLSPAFSDEG-YPRSDLSLIAAGSANAQLIN 309
Query: 309 LRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSAR 368
R+ +YG+ +NGA E ++ + G L++ + +K+LGTG+YISN YLN+SD +AR
Sbjct: 310 SRSAAEYGLTTNGAGSGEYPSALNMAPGRLSQQEILKQLGTGLYISNLWYLNYSDLPAAR 369
Query: 369 VTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRSTG 428
+TGMTRFA WVE+G+I AP++ MR+D+S+Y++ G L A+T++ + + TYG R T
Sbjct: 370 LTGMTRFATFWVENGEIQAPVSTMRFDDSVYSLLGSQLEALTEQRELLLSASTYGQRQTA 429
Query: 429 GASLPGILVKDFNCTL 444
LPG LV TL
Sbjct: 430 SMHLPGALVSRLTLTL 445
>gi|126358365|ref|ZP_01715364.1| conserved hypothetical protein [Pseudomonas putida GB-1]
gi|126317130|gb|EAZ68051.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 439
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 156/437 (35%), Positives = 247/437 (56%), Gaps = 3/437 (0%)
Query: 9 FESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHN 68
FE++ + + L GE+ ++ +S E+S F+RF+ AKVRQ G V Q R
Sbjct: 5 FETLVGDVRAALQAGEQFTLGYSAEQSQFVRFNHAKVRQAGEVSQASAQLRLVHDGRQAE 64
Query: 69 FSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIP 128
+ ++ D++ A+AL + R ++ LL D Y + E++ S ++ L D++
Sbjct: 65 QQVTLSGEVQVDRQRLADALAQLRQTLPLLALDPYLRLDESAWHSHSLQEQPLPELDEVL 124
Query: 129 ETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSG 188
+ S DLD G+Y+ G IC+G +S GA W Q +F D+S++ ENG+ +K+ Y+G
Sbjct: 125 ALLDSEAGDLDLVGIYAAGPICRGFASSFGAFGWHQANSFNFDWSLFHENGQAVKANYAG 184
Query: 189 TEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSM 248
WS + ++ QAR+ L L P L PG Y+A+++ A+ ++ W GFS +++
Sbjct: 185 QLWSADDFIARLRQAREQLGFLGRPAITLKPGSYRAYLAPAAMDEIAGMLCWGGFSAQAL 244
Query: 249 QQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPE-KLSIIEKGKLKNTLV 307
G+SA L G S + T+ S L PAF+ G AP + +I+ G+ L+
Sbjct: 245 ATGNSALQRLYNGDARLSPLVSFTEQVSGSLSPAFSDEG--APRLDVPLIQHGEALQRLI 302
Query: 308 SLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSA 367
S R+ ++ + +NGA ES ++ + GNL ++ LGTG+YISN YLN+SD +A
Sbjct: 303 SARSAAEFALLANGADSYESPCALSLAPGNLASEQVLERLGTGLYISNLWYLNYSDLPAA 362
Query: 368 RVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRST 427
R+TG+TRFA WVE+G+I P++ MR+D+SLY++ G L +T+E + +T TYG RST
Sbjct: 363 RMTGLTRFATFWVENGQIQGPVSTMRFDDSLYSLLGSQLEDLTREREMILSTSTYGQRST 422
Query: 428 GGASLPGILVKDFNCTL 444
G + LPG LVK TL
Sbjct: 423 GSSHLPGALVKGLTLTL 439
>gi|148550025|ref|YP_001270127.1| Zn-dependent protease-like protein [Pseudomonas putida F1]
gi|148514083|gb|ABQ80943.1| Zn-dependent protease-like protein [Pseudomonas putida F1]
Length = 439
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 154/440 (35%), Positives = 250/440 (56%), Gaps = 3/440 (0%)
Query: 6 KEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNR 65
K FE++ + + L GE+ ++ +S E+S F+RF+ AKVRQ G V Q + R
Sbjct: 2 KHAFETLVGEVHAALQAGEQFTLGYSAEQSQFVRFNHAKVRQAGEVSQASAQLRLVRDGR 61
Query: 66 THNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPED 125
+ ++ D++ AL++ R ++ LL D Y + E + S ++ L +
Sbjct: 62 QAEQQVTLSGDVQLDRQRLNVALEQLRQTLPLLALDPYLRLDENAWHSHSLQEHPLPALN 121
Query: 126 KIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSL 185
++ + DLD G+Y+ G +C+G +S GA W Q +F +D+S++ +NG+ +K+
Sbjct: 122 EVLALLEREAGDLDLVGIYAAGPVCRGFASSFGAFGWHQANSFNVDWSLFHDNGQAVKAN 181
Query: 186 YSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSE 245
Y+G WS + ++ QAR+ L L P L PG Y+A+++ A+ +V W GFS
Sbjct: 182 YAGQAWSADDFTARLRQAREQLGFLGRPAVTLKPGTYRAYLAPAAMDEVAGMLCWGGFSA 241
Query: 246 RSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPE-KLSIIEKGKLKN 304
+++ G+SA L G S + T+ S L PAF+ G AP + +I++G+ +
Sbjct: 242 QALATGNSALQRLYNGDARLSPLVSFTEQVSGSLSPAFSDEG--APRLDVPLIQQGEARQ 299
Query: 305 TLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDT 364
L+S R+ ++ +++NGA ES ++ + GNL A ++ LGTG+YISN YLN+SD
Sbjct: 300 RLISARSAAEFELQANGADGYESPCALSLAPGNLASAQILERLGTGLYISNLWYLNYSDL 359
Query: 365 SSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGS 424
+AR+TG+TRFA WVED +I P++ MR+D+SLY++ G L +T+E + +T TYG
Sbjct: 360 PAARMTGLTRFATFWVEDRQIQGPVSTMRFDDSLYSLLGSQLEDLTQEREMILSTSTYGQ 419
Query: 425 RSTGGASLPGILVKDFNCTL 444
RSTG + LPG LVK TL
Sbjct: 420 RSTGSSHLPGALVKGLTLTL 439
>gi|78066465|ref|YP_369234.1| Zn-dependent protease [Burkholderia sp. 383]
gi|77967210|gb|ABB08590.1| Zn-dependent protease [Burkholderia sp. 383]
Length = 453
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 158/442 (35%), Positives = 239/442 (54%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD E + + FS E S F+RF+ K+RQ G V QG S
Sbjct: 13 IDWHAHFTRLADDAQRLTTPTETVLLGFSSETSDFIRFNGGKIRQTGRVTQGRLSVRLVD 72
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R + + + D R A+A+ RD + +D + +S TG+L
Sbjct: 73 GARQAHSALTVCGDPAADLRELADAVAVLRDGLRDAQDDPHLLFDTSSWLQETRRTGRLP 132
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 133 NADGLARIVAECARGLDFVGFYAGGTLARGFASSTGSRGWYEVENFNFSWSLYDPSGRAI 192
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G +WSDA + K++ A L VL K LAPG Y+A+ + DA+ ++T W+G
Sbjct: 193 KTVYAGDDWSDAAFAAKVDAAAARLPVLGRTPKALAPGHYRAYFAPDAVHEMTSLLGWSG 252
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R++ S L G + ++T+DFSLG+ PAFN++G + + ++ +G+
Sbjct: 253 FSARAVASARSPLHRLYAGEVALDPRVSITEDFSLGIAPAFNADG-YRRDSVPLVVEGRG 311
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LV RT + G NGA ES +S+ I G L +AD + L TG+Y+ N YLN+S
Sbjct: 312 AGQLVCARTAREQGGTPNGADNGESPQSLTIAGGTLADADVLAALDTGLYVGNLWYLNFS 371
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAPI MR+D+S Y +FG L + + AN TY
Sbjct: 372 DPIACRMTGMTRFATFWVEGGRIVAPIDAMRFDDSFYRLFGAELEQLGAAPVLLANDDTY 431
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
G R+TGGA LPG+L + F TL
Sbjct: 432 GERATGGAQLPGLLARSFELTL 453
>gi|91782837|ref|YP_558043.1| hypothetical protein Bxe_A2988 [Burkholderia xenovorans LB400]
gi|91686791|gb|ABE29991.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 453
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 150/442 (33%), Positives = 247/442 (55%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ ++ +F ++AD + GE SF+GE+S F+RF+ KVRQ G V QG +
Sbjct: 13 VDWQRHFTALADAIGRLQQGGETTLSSFAGEQSDFIRFNSGKVRQTGSVSQGKLTLRLID 72
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R + + +++D + AL R+ + +D + + + +GKL
Sbjct: 73 GARQAYSTLTVCGDLQQDLDEVSAALVTLREGLRDAADDPHLLFDTSKWERTTQRSGKLP 132
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G I +G +++G+ W++ + F +S++ +GR I
Sbjct: 133 DPDGLASVVAQCAQGLDFVGFYAGGTIVRGFASTSGSRGWYEVDNFNFSWSLYDPSGRAI 192
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G +WSDA + K+EQA L VL + LAPG+Y+++++ AL ++ +WNG
Sbjct: 193 KTTYAGDDWSDAVFARKVEQAANRLAVLARAPRTLAPGRYRSYLAPAALSELLGVTAWNG 252
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S L G + +++D SLG+ P FN +G L + + +I+ G+
Sbjct: 253 FSARAQASSRSELYKLHVGEVVVDPRVTISEDLSLGITPGFNDDGYLR-DSVPLIQAGRS 311
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
L + R+ +YG+ NGA ES ++ + G+L E D + +LGTG+YI N Y+N+S
Sbjct: 312 AERLTNARSAREYGLTPNGALTGESPAALSMQAGDLPEEDVLAKLGTGLYIGNLWYVNFS 371
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE+G+IVAP+ MR+D+SLY + G L + ++ + + T+
Sbjct: 372 DRMNCRLTGMTRFATFWVENGEIVAPLEAMRFDDSLYRLLGSELEQLGAQAELLLSDSTW 431
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
G R+TGG LPGILV+ F TL
Sbjct: 432 GERATGGMQLPGILVRSFELTL 453
>gi|53723329|ref|YP_112314.1| family U62 unassigned peptidas [Burkholderia pseudomallei K96243]
gi|52213743|emb|CAH39797.1| family U62 unassigned peptidas [Burkholderia pseudomallei K96243]
Length = 453
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 152/442 (34%), Positives = 239/442 (54%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD GE + + F+GE S F+RF+ KVRQ G V QG +
Sbjct: 13 IDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLAS 72
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R +F+ + D A AL R+S+ P+D + +S S+ G L
Sbjct: 73 GGRQASFAQTVSGDWATDAPELAAALATLRESLRDAPDDPHLLFDTSSWRQSSCRDGSLP 132
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 133 DPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFDFRWSLYDASGRAI 192
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G WSDA + K+++A L L K LAPG+Y+A+++ A+ ++ W+G
Sbjct: 193 KTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPAAVAEIVGLLGWDG 252
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S+ L G F + + +DFSLG+ PAFN++G + + ++ +G+
Sbjct: 253 FSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADG-YRRDSVPLVAEGRS 311
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS RT ++G+ NGA E+ ++ I G L +AD + L TG+YI N YLN+S
Sbjct: 312 VGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFS 371
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAP+ MR+D+S+Y + G L + + N ++
Sbjct: 372 DKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLGAAPELLLNDQSW 431
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R TGGA LPG+L + F TL
Sbjct: 432 SERPTGGAKLPGLLARSFELTL 453
>gi|66047992|ref|YP_237833.1| hypothetical protein Psyr_4768 [Pseudomonas syringae pv. syringae
B728a]
gi|63258699|gb|AAY39795.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
Length = 441
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 156/443 (35%), Positives = 239/443 (53%), Gaps = 3/443 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
MS ++ FE++ + + + E ++++ E S F+RF+ +VRQ G V Q +
Sbjct: 1 MSHQQQFEALVAVLKAAISPTEHFTLAYDAEASDFIRFNHGQVRQAGSVQQVIATFKLID 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R N + E D++ +ALQ+ R+++ L D Y + SS + L
Sbjct: 61 DGRHANLELTLSGDAETDQQRLVDALQQLRETLPSLARDPYLLPNTTAWQSSNVQDLPLP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
++ E I DLD G Y+ G + +G +S GA W Q +F D+S++ ENG+ +
Sbjct: 121 DSARVVEQISELAGDLDLVGFYAAGPLYRGFASSWGALGWHQANSFNFDWSLFHENGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G WSD + + +QAR+ LE L P L PG+Y+A+++ AL +V +W G
Sbjct: 181 KANYAGHHWSDEAFVQRFQQAREQLEFLGRPLHALKPGQYRAYLAPAALDEVIGMLTWGG 240
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEK-LSIIEKGK 301
FS +S+ S L +G FS N + S L PAF+ G P K L +I G+
Sbjct: 241 FSAQSLASKRSPLQRLYDGETPFSPLVNFDEKVSGSLSPAFSREG--YPRKDLKLIVDGQ 298
Query: 302 LKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNW 361
++ LV + +YG+ +NGA E ++ I G+L + LGTG+YISN YLN+
Sbjct: 299 ARDRLVDSSSAAEYGLPANGADYGEGPSALSIAGGSLELDQILARLGTGLYISNLWYLNF 358
Query: 362 SDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGT 421
SD ++AR+TGMTRFA WVE+GKIVAP++ MR+D+S Y++ G L +TKE + + T
Sbjct: 359 SDRAAARLTGMTRFATFWVEEGKIVAPVSTMRFDDSAYSLLGSALEDLTKERELILQSST 418
Query: 422 YGSRSTGGASLPGILVKDFNCTL 444
Y R TG LPG L+ TL
Sbjct: 419 YSQRQTGSIQLPGALISRLTLTL 441
>gi|82534399|ref|ZP_00893434.1| hypothetical protein Bpse110_02004297 [Burkholderia pseudomallei
1106b]
gi|90290948|ref|ZP_01210587.1| hypothetical protein Bpse17_02004354 [Burkholderia pseudomallei
1710a]
gi|100059939|ref|ZP_01322070.1| hypothetical protein BpseP_03004169 [Burkholderia pseudomallei
Pasteur]
Length = 454
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 152/442 (34%), Positives = 239/442 (54%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD GE + + F+GE S F+RF+ KVRQ G V QG +
Sbjct: 14 IDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLAS 73
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R +F+ + D A AL R+S+ P+D + +S S+ G L
Sbjct: 74 GGRQASFAQTVSGDWATDAPELAAALATLRESLRDAPDDPHLLFDTSSWRQSSRRDGSLP 133
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 134 DPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFDFRWSLYDASGRAI 193
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G WSDA + K+++A L L K LAPG+Y+A+++ A+ ++ W+G
Sbjct: 194 KTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPAAVAEIVGLLGWDG 253
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S+ L G F + + +DFSLG+ PAFN++G + + ++ +G+
Sbjct: 254 FSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADG-YRRDSVPLVAEGRS 312
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS RT ++G+ NGA E+ ++ I G L +AD + L TG+YI N YLN+S
Sbjct: 313 VGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFS 372
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAP+ MR+D+S+Y + G L + + N ++
Sbjct: 373 DKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLGAAPELLLNDQSW 432
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R TGGA LPG+L + F TL
Sbjct: 433 SERPTGGAKLPGLLARSFELTL 454
>gi|134281882|ref|ZP_01768589.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|134246944|gb|EBA47031.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 454
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 152/442 (34%), Positives = 238/442 (53%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD GE + + F+GE S F+RF+ KVRQ G V QG +
Sbjct: 14 IDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLAS 73
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R +F+ + D A AL R+S+ P+D + +S S G L
Sbjct: 74 GGRQASFAQTVSGDWATDAPELAAALATLRESLRDAPDDPHLLFDTSSWRQSGRRDGSLP 133
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 134 DPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFDFRWSLYDASGRAI 193
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G WSDA + K+++A L L K LAPG+Y+A+++ A+ ++ W+G
Sbjct: 194 KTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPAAVAEIVGLLGWDG 253
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S+ L G F + + +DFSLG+ PAFN++G + + ++ +G+
Sbjct: 254 FSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADG-YRRDSVPLVAEGRS 312
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS RT ++G+ NGA E+ ++ I G L +AD + L TG+YI N YLN+S
Sbjct: 313 VGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFS 372
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAP+ MR+D+S+Y + G L + + N ++
Sbjct: 373 DKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLGAAPELLLNDQSW 432
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R TGGA LPG+L + F TL
Sbjct: 433 SERPTGGAKLPGLLARSFELTL 454
>gi|119856509|ref|ZP_01637942.1| conserved hypothetical protein [Pseudomonas putida W619]
gi|119817468|gb|EAX20211.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 443
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 148/421 (35%), Positives = 236/421 (56%), Gaps = 1/421 (0%)
Query: 24 EKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHNFSFGIQMSMEKDKRM 83
E+ ++ +S E+S F+RF+ AKVRQ G V Q + R + + D++
Sbjct: 24 EQFTLGYSAEQSQFVRFNHAKVRQAGEVSQASAHLRLIRDGRQAEQQVTLSGDGQVDRQR 83
Query: 84 AAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIPETILSPVKDLDFAGL 143
EAL++ R ++ LLP D Y + +++ S ++ L ++ + DLD G+
Sbjct: 84 LGEALEQLRQTLPLLPADPYLRLDQSAWHSHSLQDQALPELSEVLALLEGEAGDLDLVGI 143
Query: 144 YSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTEWSDAQYKLKIEQA 203
Y+ G IC+G +S GA W Q +F D+S++ NG+ +K+ Y+G W+ ++ ++ QA
Sbjct: 144 YAAGPICRGFASSYGAFGWHQANSFNFDWSLFHSNGQAVKANYAGQAWNADEFTARLRQA 203
Query: 204 RKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSMQQGSSAYLALKEGRE 263
R+ L L P L PG Y+A+++ A+ ++ W GFS +++ G+SA L G
Sbjct: 204 REQLGFLGRPAITLKPGSYRAYLAPAAMDEIAGMLCWGGFSAQALATGNSALQRLYSGDA 263
Query: 264 HFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNTLVSLRTETQYGVKSNGAP 323
S + S L PAF+ G + + +I +G+ + LVS R+ ++ + +NGA
Sbjct: 264 RLSPLVCFHEQVSGSLSPAFSDEGS-PRQDVPLIREGQALDRLVSARSAAEFELLANGAD 322
Query: 324 LSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSARVTGMTRFACLWVEDG 383
ES ++ + GNL AD + LGTG+YISN YLN+SD +AR+TG+TRFA WVE+G
Sbjct: 323 SYESPCALSLAAGNLANADILARLGTGLYISNLWYLNYSDLPAARMTGLTRFATFWVENG 382
Query: 384 KIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRSTGGASLPGILVKDFNCT 443
+I P++ MR+D+SLY++ G L +T E + +T TYG RSTG + LPG LVK T
Sbjct: 383 QIQGPVSTMRFDDSLYSLLGSQLEDLTCEREMILSTSTYGQRSTGSSHLPGALVKGLTLT 442
Query: 444 L 444
L
Sbjct: 443 L 443
>gi|76818715|ref|YP_336615.1| hypothetical protein BURPS1710b_A1458 [Burkholderia pseudomallei
1710b]
gi|126455761|ref|YP_001077156.1| hypothetical protein BURPS1106A_A3127 [Burkholderia pseudomallei
1106a]
gi|76583188|gb|ABA52662.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
gi|126229529|gb|ABN92942.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
Length = 453
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 152/442 (34%), Positives = 239/442 (54%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD GE + + F+GE S F+RF+ KVRQ G V QG +
Sbjct: 13 IDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLAS 72
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R +F+ + D A AL R+S+ P+D + +S S+ G L
Sbjct: 73 GGRQASFAQTVSGDWATDAPELAAALATLRESLRDAPDDPHLLFDTSSWRQSSRRDGSLP 132
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 133 DPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFDFRWSLYDASGRAI 192
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G WSDA + K+++A L L K LAPG+Y+A+++ A+ ++ W+G
Sbjct: 193 KTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPAAVAEIVGLLGWDG 252
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S+ L G F + + +DFSLG+ PAFN++G + + ++ +G+
Sbjct: 253 FSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADG-YRRDSVPLVAEGRS 311
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS RT ++G+ NGA E+ ++ I G L +AD + L TG+YI N YLN+S
Sbjct: 312 VGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFS 371
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAP+ MR+D+S+Y + G L + + N ++
Sbjct: 372 DKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLGAAPELLLNDQSW 431
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R TGGA LPG+L + F TL
Sbjct: 432 SERPTGGAKLPGLLARSFELTL 453
>gi|99908507|ref|ZP_01316190.1| hypothetical protein Bpse1_03004434 [Burkholderia pseudomallei
1655]
Length = 454
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 152/442 (34%), Positives = 239/442 (54%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD GE + + F+GE S F+RF+ KVRQ G V QG +
Sbjct: 14 IDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLAS 73
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R +F+ + D A AL R+S+ P+D + +S S+ G L
Sbjct: 74 GGRQASFAQTVSGDWATDAPELAAALATLRESLRDAPDDPHLLFDTSSWRQSSRRDGSLP 133
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 134 DPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFDFRWSLYDASGRAI 193
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G WSDA + K+++A L L K LAPG+Y+A+++ A+ ++ W+G
Sbjct: 194 KTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPAAVAEIVGLLGWDG 253
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S+ L G F + + +DFSLG+ PAFN++G + + ++ +G+
Sbjct: 254 FSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADG-YRRDSVPLVAEGRS 312
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS RT ++G+ NGA E+ ++ I G L +AD + L TG+YI N YLN+S
Sbjct: 313 VGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFS 372
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAP+ MR+D+S+Y + G L + + N ++
Sbjct: 373 DKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLGAAPELLLNDQSW 432
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R TGGA LPG+L + F TL
Sbjct: 433 SERPTGGAKLPGLLARSFELTL 454
>gi|84326857|ref|ZP_00974881.1| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Pseudomonas aeruginosa 2192]
gi|126194339|gb|EAZ58402.1| hypothetical protein PA2G_01641 [Pseudomonas aeruginosa 2192]
Length = 441
Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 149/442 (33%), Positives = 244/442 (55%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
M +++FE++A+ + L EGE ++ +S E S F+RF++A+VRQ G V Q +
Sbjct: 1 MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRFNRARVRQAGRVRQASALLRLIR 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R + + + E+D++ AE L++ R S+ +P D Y + ++ G
Sbjct: 61 DERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTSAWQRENQDLGAAP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
+ ++ +DLD G+Y+ G + +G S GA W +F D+S++ NG+ +
Sbjct: 121 DSGALLASLERQARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHGNGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G W D + + EQAR+ L L P ++L PG Y+A+++ AL +V W G
Sbjct: 181 KADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQMLCWGG 240
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R++ G S L+ G S NL + + PAF++ G E + ++ G+L
Sbjct: 241 FSARALATGESPLQRLQNGDALLSPLLNLAERPATSPSPAFSAEGSPRAE-VELVGNGRL 299
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS R+ +YG+ +NGA +E+ ++ + G+L +A ++ L TG+YI N YLN+S
Sbjct: 300 SGRLVSSRSAREYGLVANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNLWYLNYS 359
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D +AR+TGMTRFA WVE+G+I AP++ MR+D+SLY+ G +L ++ E + ++ TY
Sbjct: 360 DMPAARLTGMTRFATFWVENGQIRAPVSTMRFDDSLYSFLGAHLEDLSHERELRLSSNTY 419
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
G R T LPG L F TL
Sbjct: 420 GERQTDSMHLPGALTGRFTLTL 441
>gi|15597726|ref|NP_251220.1| hypothetical protein PA2530 [Pseudomonas aeruginosa PAO1]
gi|9948586|gb|AAG05918.1|AE004680_6 hypothetical protein PA2530 [Pseudomonas aeruginosa PAO1]
Length = 441
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 149/442 (33%), Positives = 244/442 (55%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
M +++FE++A+ + L EGE ++ +S E S F+RF++A+VRQ G V Q +
Sbjct: 1 MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRFNRARVRQAGRVRQASALLRLIR 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R + + + E+D++ AE L++ R S+ +P D Y + ++ G
Sbjct: 61 DERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTSAWQRENQDLGAAP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
+ ++ +DLD G+Y+ G + +G S GA W +F D+S++ NG+ +
Sbjct: 121 DSGALLASLERRARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHGNGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G W D + + EQAR+ L L P ++L PG Y+A+++ AL +V W G
Sbjct: 181 KADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQMLCWGG 240
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R++ G S L+ G S NL + + PAF++ G E + ++ G+L
Sbjct: 241 FSARALATGESPLQRLQNGDALLSPLLNLAERPATSPSPAFSAEGSPRAE-VELVGNGRL 299
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS R+ +YG+ +NGA +E+ ++ + G+L +A ++ L TG+YI N YLN+S
Sbjct: 300 SGRLVSSRSAREYGLVANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNLWYLNYS 359
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D +AR+TGMTRFA WVE+G+I AP++ MR+D+SLY+ G +L ++ E + ++ TY
Sbjct: 360 DMPAARLTGMTRFATFWVENGQIRAPVSTMRFDDSLYSFLGAHLEDLSHERELRLSSNTY 419
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
G R T LPG L F TL
Sbjct: 420 GERQTDSMHLPGALTGRFTLTL 441
>gi|67640396|ref|ZP_00439204.1| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Burkholderia mallei GB8 horse 4]
gi|83618327|ref|ZP_00928791.1| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Burkholderia mallei FMH]
gi|83623239|ref|ZP_00933516.1| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Burkholderia mallei JHU]
gi|100121871|ref|ZP_01327769.1| hypothetical protein BpseS_03004134 [Burkholderia pseudomallei S13]
gi|100231467|ref|ZP_01332960.1| hypothetical protein Bpse4_03004554 [Burkholderia pseudomallei
406e]
gi|100915329|ref|ZP_01343821.1| hypothetical protein Bmal10_03003445 [Burkholderia mallei 10399]
gi|121596630|ref|YP_990693.1| hypothetical protein BMASAVP1_1094 [Burkholderia mallei SAVP1]
gi|121224428|gb|ABM47959.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|147755049|gb|EDK62113.1| conserved hypothetical protein [Burkholderia mallei JHU]
Length = 454
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 151/442 (34%), Positives = 238/442 (53%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD GE + + F+GE S F+RF+ KVRQ G V QG +
Sbjct: 14 IDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLAS 73
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R +F+ + D A AL R+S+ +D + +S S+ G L
Sbjct: 74 GGRQASFAQTVSGDWATDAPELAAALATLRESLRDASDDPHLLFDTSSWRQSSRRDGSLP 133
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 134 DPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFDFRWSLYDASGRAI 193
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G WSDA + K+++A L L K LAPG+Y+A+++ A+ ++ W+G
Sbjct: 194 KTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPAAVAEIVGLLGWDG 253
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S+ L G F + + +DFSLG+ PAFN++G + + ++ +G+
Sbjct: 254 FSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADG-YRRDSVPLVAEGRS 312
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS RT ++G+ NGA E+ ++ I G L +AD + L TG+YI N YLN+S
Sbjct: 313 VGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFS 372
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAP+ MR+D+S+Y + G L + + N ++
Sbjct: 373 DKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLGAAPELLLNDQSW 432
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R TGGA LPG+L + F TL
Sbjct: 433 SERPTGGAKLPGLLARSFELTL 454
>gi|53715907|ref|YP_106576.1| hypothetical protein BMAA2065 [Burkholderia mallei ATCC 23344]
gi|124381399|ref|YP_001025176.1| hypothetical protein BMA10299_1374 [Burkholderia mallei NCTC 10229]
gi|126447164|ref|YP_001079530.1| hypothetical protein BMA10247_A2359 [Burkholderia mallei NCTC
10247]
gi|52421877|gb|AAU45447.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|124289419|gb|ABM98688.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|126240018|gb|ABO03130.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|147745834|gb|EDK52913.1| conserved hypothetical protein [Burkholderia mallei FMH]
Length = 453
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 151/442 (34%), Positives = 238/442 (53%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
+ + +F +AD GE + + F+GE S F+RF+ KVRQ G V QG +
Sbjct: 13 IDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLAS 72
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R +F+ + D A AL R+S+ +D + +S S+ G L
Sbjct: 73 GGRQASFAQTVSGDWATDAPELAAALATLRESLRDASDDPHLLFDTSSWRQSSRRDGSLP 132
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
D + + + LDF G Y+ G + +G +S G+ W++ E F +S++ +GR I
Sbjct: 133 DPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFDFRWSLYDASGRAI 192
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K++Y+G WSDA + K+++A L L K LAPG+Y+A+++ A+ ++ W+G
Sbjct: 193 KTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPAAVAEIVGLLGWDG 252
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R+ S+ L G F + + +DFSLG+ PAFN++G + + ++ +G+
Sbjct: 253 FSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADG-YRRDSVPLVAEGRS 311
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS RT ++G+ NGA E+ ++ I G L +AD + L TG+YI N YLN+S
Sbjct: 312 VGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFS 371
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE G+IVAP+ MR+D+S+Y + G L + + N ++
Sbjct: 372 DKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLGAAPELLLNDQSW 431
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R TGGA LPG+L + F TL
Sbjct: 432 SERPTGGAKLPGLLARSFELTL 453
>gi|116050474|ref|YP_790707.1| putative protease [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585695|gb|ABJ11710.1| putative protease [Pseudomonas aeruginosa UCBPP-PA14]
Length = 441
Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats.
Identities = 153/448 (34%), Positives = 247/448 (55%), Gaps = 13/448 (2%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
M +++FE++A+ + L EGE ++ +S E S F+RF++A+VRQ G V Q +
Sbjct: 1 MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRFNRARVRQAGRVRQASALLRLIR 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIP------EASQTSSAI 116
R + + + E+D++ AE L++ R S+ +P D Y + E S+A
Sbjct: 61 DERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTTAWQRENQDLSAAP 120
Query: 117 YTGKLLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWL 176
+G LL ++ +DLD G+Y+ G + +G S GA W +F D+S++
Sbjct: 121 DSGALLA------SLERQARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFH 174
Query: 177 ENGRGIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTD 236
NG+ +K+ Y+G W D + + EQAR+ L L P ++L PG Y+A+++ AL +V
Sbjct: 175 GNGQAVKADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQ 234
Query: 237 FFSWNGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSI 296
W G S R++ G S L+ G S NL + + PAF++ G E + +
Sbjct: 235 MLCWGGLSARALATGESPLQRLQNGDALLSPLLNLAERPATSPSPAFSAEGSPRAE-VEL 293
Query: 297 IEKGKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNF 356
+ G+L LVS R+ +YG+ +NGA +E+ ++ + G+L +A ++ L TG+YI N
Sbjct: 294 VGNGRLSGRLVSSRSAREYGLVANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNL 353
Query: 357 NYLNWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIF 416
YLN+SD +AR+TGMTRFA WVE+G+I AP++ MR+D+SLY+ G +L ++ E +
Sbjct: 354 WYLNYSDMPAARLTGMTRFATFWVENGQIRAPVSTMRFDDSLYSFLGAHLEDLSHERELR 413
Query: 417 ANTGTYGSRSTGGASLPGILVKDFNCTL 444
++ TYG R T LPG L F TL
Sbjct: 414 LSSNTYGERQTDSMHLPGALTGRFTLTL 441
>gi|84320763|ref|ZP_00969132.1| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Pseudomonas aeruginosa C3719]
gi|126167456|gb|EAZ52967.1| hypothetical protein PACG_01446 [Pseudomonas aeruginosa C3719]
Length = 441
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 148/442 (33%), Positives = 243/442 (54%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
M +++FE++A+ + L EGE ++ +S E S F+RF++A+VRQ V Q +
Sbjct: 1 MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRFNRARVRQTVRVRQASALLRLIR 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R + + + E+D++ AE L++ R S+ +P D Y + ++ G
Sbjct: 61 DERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTSAWQRENQDLGAAP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
+ ++ +DLD G+Y+ G + +G S GA W +F D+S++ NG+ +
Sbjct: 121 DSGALLASLERRARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHGNGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G W D + + EQAR+ L L P ++L PG Y+A+++ AL +V W G
Sbjct: 181 KADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQMLCWGG 240
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R++ G S L+ G S NL + + PAF++ G E + ++ G+L
Sbjct: 241 FSARALATGESPLQRLQNGDALLSPLLNLAERPATSPSPAFSAEGSPRAE-VELVGNGRL 299
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS R+ +YG+ +NGA +E+ ++ + G+L +A ++ L TG+YI N YLN+S
Sbjct: 300 SGRLVSSRSAREYGLVANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNLWYLNYS 359
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D +AR+TGMTRFA WVE+G+I AP++ MR+D+SLY+ G +L ++ E + ++ TY
Sbjct: 360 DMPAARLTGMTRFATFWVENGQIRAPVSTMRFDDSLYSFLGAHLEDLSHERELRLSSNTY 419
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
G R T LPG L F TL
Sbjct: 420 GERQTDSMHLPGALTGRFTLTL 441
>gi|107101977|ref|ZP_01365895.1| hypothetical protein PaerPA_01003024 [Pseudomonas aeruginosa PACS2]
Length = 441
Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 148/442 (33%), Positives = 243/442 (54%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
M +++FE++A+ + L EGE ++ +S E S F+RF++A+VRQ G V Q +
Sbjct: 1 MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRFNRARVRQAGRVRQASALLRLIR 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R + + + E+D++ AE L++ R S+ +P D Y + ++ G
Sbjct: 61 DERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTSAWQRENQDLGAAP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
+ ++ +DLD G+Y+ G + +G S GA W +F D+S++ NG+ +
Sbjct: 121 DSGALLASLERRARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHGNGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G W D + + EQAR+ L L P ++L PG Y+A+++ AL +V W G
Sbjct: 181 KADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQMLCWGG 240
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R++ G S L+ G S NL + + PAF++ G E + ++ G+L
Sbjct: 241 FSARALATGESPLQRLQNGDALLSPLLNLAERPATSPSPAFSAEGSPRAE-VELVGNGRL 299
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS R+ +YG+ +NGA +E+ ++ + G+L +A ++ L TG+YI N YLN+S
Sbjct: 300 SGRLVSSRSAREYGLVANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNLWYLNYS 359
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D +AR+TGMTRFA WVE+G+I AP++ MR+D+SLY+ G +L ++ E + ++ TY
Sbjct: 360 DMPAARLTGMTRFATFWVENGQIRAPVSTMRFDDSLYSFLGAHLEDLSHERELRLSSNTY 419
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
R T LPG L F TL
Sbjct: 420 DERQTDSMHLPGALTGRFTLTL 441
>gi|71735178|ref|YP_276898.1| predicted Zn-dependent protease [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555731|gb|AAZ34942.1| predicted Zn-dependent protease [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 455
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 152/437 (34%), Positives = 238/437 (54%), Gaps = 3/437 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
MS ++ FE++ + + + E ++++ E S F+RF+ +VRQ G V Q +
Sbjct: 1 MSHQQQFEALVAVLKAAISPTEHFTLAYDAEASDFIRFNHGQVRQAGSVQQVIATFKLID 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R N + E D R + ALQ+ R+++ L +D Y + SS + L
Sbjct: 61 DGRHANLEVTLSGDQETDTRRLSNALQQLRETLPSLAKDPYLLPNTQAWQSSNVQDLPLP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
++ E I DLD G Y+ G + +G +S GA W Q +F D+S++ ENG+ +
Sbjct: 121 DSAQVVEQISQLSGDLDLVGFYAAGPLYRGFASSWGALGWHQANSFNFDWSLFHENGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G +W++ + + +QAR+ LE L P L PG+Y+A+++ AL +V W G
Sbjct: 181 KANYAGHDWNNEAFVQRFQQAREQLEFLGRPLHTLKPGQYRAYLAPAALDEVIGMLRWGG 240
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEK-LSIIEKGK 301
FS +++ S L +G HFS + + S L PAF+ G P K L +I G+
Sbjct: 241 FSAQAVASKRSPLQRLYDGETHFSPLISFDEQVSGSLSPAFSREG--YPRKDLKLIVNGQ 298
Query: 302 LKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNW 361
+ LV + +Y + +NGA E ++ I G+L +++LGTG+YISN YLN+
Sbjct: 299 ARERLVDSSSAAEYDLPANGADYGEGPSALSIAGGSLELDQILEKLGTGLYISNLWYLNF 358
Query: 362 SDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGT 421
SD ++AR+TGMTRFA WVEDGKIVAP++ MR+D+S Y++ G L +T+E + + T
Sbjct: 359 SDRAAARLTGMTRFATFWVEDGKIVAPVSTMRFDDSAYSLLGSALEDLTRERELILQSST 418
Query: 422 YGSRSTGGASLPGILVK 438
Y R TG LPG L K
Sbjct: 419 YTQRQTGSIQLPGALDK 435
>gi|28867638|ref|NP_790257.1| hypothetical protein PSPTO_0408 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28850873|gb|AAO53952.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 441
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 150/443 (33%), Positives = 242/443 (54%), Gaps = 3/443 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
MS ++ FE++ + + + E ++++ E S F+RF+ +VRQ G V Q +
Sbjct: 1 MSHQQQFEALVAVLKAAISPTEHFTLAYDAEASDFIRFNHGQVRQAGRVQQVIATFKLIN 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R N + E D + +ALQ+ R+++ L +D Y + SS + L
Sbjct: 61 DGRHANLEVTLSGDSETDTQRLTDALQQLRETLPALAKDPYLLPNTEAWQSSNVQDLPLP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
++ E I +LD G Y+ G + +G +S GA W Q +F D+S++ ENG+ +
Sbjct: 121 DSAQVVEQICELSGELDLVGFYAAGPLYRGFASSWGALGWHQANSFNFDWSLFHENGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G W++ + + EQAR+ LE L P L PG+Y+A+++ A+ ++ +W G
Sbjct: 181 KANYAGHHWNNEAFVRRFEQAREQLEFLGRPLHTLEPGQYRAYLAPAAVDEIIGMLTWGG 240
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEK-LSIIEKGK 301
FS +++ S L +G FS FN+ + S L PAF+ G P K L++I G+
Sbjct: 241 FSAQALASKRSPLQRLYDGDTRFSPLFNVEEHVSGSLSPAFSREG--YPRKDLTLIVDGQ 298
Query: 302 LKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNW 361
+ LV + +Y + +NGA E ++ I G+L +++LGTG+YISN YLN+
Sbjct: 299 ARERLVDSSSAAEYDLPANGADYGEGPSALDIAGGSLELDQVLEKLGTGLYISNLWYLNF 358
Query: 362 SDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGT 421
SD ++AR+TGMTRFA WVE+G+IVAP++ MR+D+S Y++ G L +T+E + + T
Sbjct: 359 SDRAAARLTGMTRFATFWVEEGRIVAPVSTMRFDDSAYSLLGSALEDLTRERELILQSST 418
Query: 422 YGSRSTGGASLPGILVKDFNCTL 444
Y R TG LPG LV TL
Sbjct: 419 YTQRQTGSIQLPGALVSHITFTL 441
>gi|118039076|ref|ZP_01510478.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
gi|117990575|gb|EAV04871.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 453
Score = 268 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 147/443 (33%), Positives = 251/443 (56%), Gaps = 3/443 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISIS-FSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFW 61
+ ++ +F +AD + L +G + ++S F+GE+S F+RF+ KVRQ+G V QG +
Sbjct: 13 VDWERHFTLLAD-AIERLQQGSETTLSSFAGEQSDFIRFNSGKVRQSGSVSQGKLTLRLI 71
Query: 62 KKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKL 121
R + + +++D + AL R+ + +D + + + +GKL
Sbjct: 72 DGARQAYSTLTVCGDLQQDLDEVSAALATLREGLRDAADDPHLLFDTSKWERTTQRSGKL 131
Query: 122 LPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRG 181
+ + + LDF G Y+ G I +G +++G+ W++ + F +S++ +GR
Sbjct: 132 PNPGGLAHIVAECAQGLDFVGFYAGGTIVRGFASTSGSRGWYEVDNFNFSWSLYDPSGRA 191
Query: 182 IKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWN 241
IK+ Y+G +WSDA + K+EQA L VL + LAPG+Y+++++ AL ++ +W+
Sbjct: 192 IKTTYAGDDWSDAVFAAKVEQAATRLAVLARTPRTLAPGRYRSYLAPAALAELLSVTAWS 251
Query: 242 GFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGK 301
GFS R+ S L G + +++D SLG+ P FN +G L + + +IE G+
Sbjct: 252 GFSARAQASSRSELYKLHVGEVVVDPRVTISEDLSLGITPGFNDDGYLR-DSVPLIEAGR 310
Query: 302 LKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNW 361
L + R+ +YG+ NGA SES ++ + G+L + + + ++GTG+YI N Y+N+
Sbjct: 311 SAERLTNARSAREYGLTPNGALASESPAALSMQAGDLQDEEVLAKIGTGLYIGNLWYVNF 370
Query: 362 SDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGT 421
SD + R+TGMTRFA WVE+G+IVAP+ MR+D+SLY + G L + ++ + + T
Sbjct: 371 SDRMNCRLTGMTRFATFWVENGEIVAPLEAMRFDDSLYRLLGSELEQLGAQAELLLSDST 430
Query: 422 YGSRSTGGASLPGILVKDFNCTL 444
+G R+TGG LPGILV+ F TL
Sbjct: 431 WGERATGGMQLPGILVRSFELTL 453
>gi|146305785|ref|YP_001186250.1| Zn-dependent protease-like protein [Pseudomonas mendocina ymp]
gi|145573986|gb|ABP83518.1| Zn-dependent protease-like protein [Pseudomonas mendocina ymp]
Length = 439
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 145/442 (32%), Positives = 240/442 (54%), Gaps = 3/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
M +++F + + +++ E ++++S E+S F+RF+ +VRQ G V Q Y + ++
Sbjct: 1 MDARQHFCELLAHLQAQVAGEEGFTLAYSAEQSGFVRFNHGRVRQAGQVQQSYVTLALYQ 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R + ++E+D +ALQ+ R + L +D Y + + S L
Sbjct: 61 GQRHAESRLALGGTLEEDLPRLQQALQQLRAVLPTLSDDPYLRLNREAWRSELAVEATLP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
+ + I+S LD G + G +G +S GA W+ +F L++S++ +NG+ +
Sbjct: 121 DSAAMAQQIVSAASGLDLVGFLAVGPQYQGFASSWGAFGWYAASSFNLEFSLFHDNGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
KS Y+G +W + K+E AR+ L L P K L PG Y+A+++ AL ++ W G
Sbjct: 181 KSAYAGEQWDVQAFARKLEDARQQLAYLGRPAKALQPGAYRAYLAPAALEELISLCCW-G 239
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
F +++ G S L G+ S + + + GL P F + G + L ++ +G+
Sbjct: 240 FGAQALASGGSPLQRLFSGKAELSSQVVIEERIEGGLAPVFTAEG--PRQALRLVSQGRP 297
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS R+ +YG+ +NGA E S+ + G L+E D ++ LG+G+YI N Y N+S
Sbjct: 298 GERLVSSRSAAEYGLIANGACSGEYPLSLRMHGGELDEQDVLQRLGSGLYIGNLWYGNFS 357
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D +AR+TGMTRFA WVEDG+I AP+ MR+D+SL+++ G L A+T+E + GTY
Sbjct: 358 DLPAARLTGMTRFATFWVEDGQIQAPVNTMRFDDSLFDVLGAQLEALTREPELLLPGGTY 417
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
G+R TG +LPG L+ F TL
Sbjct: 418 GARQTGSMALPGALLSRFTLTL 439
>gi|152988910|ref|YP_001348066.1| hypothetical protein PSPA7_2706 [Pseudomonas aeruginosa PA7]
gi|150964068|gb|ABR86093.1| hypothetical protein PSPA7_2706 [Pseudomonas aeruginosa PA7]
Length = 441
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 144/442 (32%), Positives = 235/442 (53%), Gaps = 1/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
M +++FE++A+ + +L EGE ++ +S E S F+RF++A+VRQ G V Q +
Sbjct: 1 MQQRQHFEALAEDLRRQLAEGEDFTLWYSAEDSEFIRFNRARVRQAGRVRQATTLLRLIR 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R + + E+D++ + L++ R S+ +P D Y + G
Sbjct: 61 DERQASLDLTLSGIPEEDRQRLGDGLRQLRRSLAWIPADPYLLLDTTPWQRLDESLGAPP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
++ I +DLD G+Y+ G + +G S GA W +F D+S++ NG+ +
Sbjct: 121 DSGELLAGIERQARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHANGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
K+ Y+G W ++ + EQAR+ L L P ++L PG Y+A+++ AL +V W G
Sbjct: 181 KADYAGQHWDGERFARRFEQAREQLGHLGKPVRQLKPGDYRAYLAPAALEEVLQMLCWGG 240
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS R++ G S L G S NL + + PAF + G + + +I G+
Sbjct: 241 FSARALATGESPLQRLHNGDALLSPLLNLGERPAGSPSPAFRAEGSPRAD-VELIGGGRP 299
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
LVS R+ +YG+++NGA E+ ++ + G+L + + L TG+YI N YLN+S
Sbjct: 300 GGRLVSSRSAREYGLQANGADAGEAPSALDMAGGSLEQERILAALDTGLYIGNLWYLNYS 359
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D +AR+TG+TRFA WVE+G+I AP++ MR+D+SLY+ G +L ++ E + + TY
Sbjct: 360 DMPAARLTGLTRFATFWVENGRIQAPVSTMRFDDSLYSFLGAHLEDLSHERELRLSNSTY 419
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
G R T LPG L F TL
Sbjct: 420 GERHTDSMHLPGALTGRFTLTL 441
>gi|146282083|ref|YP_001172236.1| predicted Zn-dependent protease [Pseudomonas stutzeri A1501]
gi|145570288|gb|ABP79394.1| predicted Zn-dependent protease [Pseudomonas stutzeri A1501]
Length = 449
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 147/439 (33%), Positives = 236/439 (53%), Gaps = 2/439 (0%)
Query: 7 EYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRT 66
E+F+ I + + L GE ++ ++ E S F+RF+ KVRQ G VDQ + + R
Sbjct: 12 EHFQGIREALQRALNAGEHYTLWYNAEASDFVRFNHGKVRQAGQVDQIEMTLGLARDRRH 71
Query: 67 HNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDK 126
+ +Q ++ D+ EA+ + R + L D Y + T+ +
Sbjct: 72 ASARLTLQGNVILDRPRVTEAVSQLRGVLSDLAPDPYLQLNHLGWTNESSSLQMAPAPGD 131
Query: 127 IPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLY 186
+ E I + KD D G Y+ G I G SAGA W +++S++ + GR +K+
Sbjct: 132 VIEQIGNASKDRDIVGFYASGPIYYGYADSAGAFGWHAVSQSSVEWSLFDDAGRAVKAQL 191
Query: 187 SGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSER 246
+G W+ A ++ ++ QA LE+L P + L PG Y+A+++ AL ++ +W+ FS R
Sbjct: 192 AGPAWNPAAFEARMAQADLHLEMLRKPVRVLQPGAYRAYLAPAALGELLGLMAWSAFSAR 251
Query: 247 SMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNTL 306
+++ S L G++ S + L++ S L PAF +G + + L +IE GKL L
Sbjct: 252 ALRTAQSPLQQLFAGQQSLSPQLGLSEQVSGSLCPAFTRDGRIR-DDLRLIEHGKLVGEL 310
Query: 307 VSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSS 366
VS R+ +YG++ NG+ + E RS+ + TG + + EL TG++ISN Y+N SD ++
Sbjct: 311 VSARSAREYGLRENGSDMEEMPRSLCMDTGTIETEQVLAELDTGLFISNLWYVNHSDLAT 370
Query: 367 ARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFG-ENLLAVTKESRIFANTGTYGSR 425
AR+TGMTR+A WVE G+IVAP+ MR+D+SLY G +LL +T++ + + TYG R
Sbjct: 371 ARLTGMTRYATFWVEKGQIVAPVDTMRFDDSLYQFLGPPHLLGLTRQRELSPSHSTYGRR 430
Query: 426 STGGASLPGILVKDFNCTL 444
T LPG L F TL
Sbjct: 431 HTESMLLPGALTTKFVLTL 449
>gi|34498151|ref|NP_902366.1| hypothetical protein CV_2696 [Chromobacterium violaceum ATCC 12472]
gi|34104006|gb|AAQ60366.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 438
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 139/441 (31%), Positives = 236/441 (53%), Gaps = 6/441 (1%)
Query: 6 KEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNR 65
+ + + +A + L E E ++ E++ F+RF+ KVRQ G V Q Y + R
Sbjct: 2 RAHLQRLAAALSGLLRESEGFTLWLEAERTDFVRFNHGKVRQAGEVKQAYLDLRLIRGKR 61
Query: 66 THNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPED 125
+ ++D + +L R ++ + +D + + + ++ I G L P +
Sbjct: 62 QATQQLSLSGG-DEDLALVEASLPALRAALEQVQDDPFLLLNQRPSSTERIADGALPPAE 120
Query: 126 KIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSL 185
+ IL+ + LD G+ + G + G G +W Q+E++ D+S++ + +K
Sbjct: 121 SMVADILAAAEGLDLVGILACGEMSFGFANHLGQFNWQQSESWNFDWSLYSHGDKAVKRS 180
Query: 186 YSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSE 245
+G+ W + I +A + L +L P K LAPG+Y+A+ + AL + +W G SE
Sbjct: 181 QAGSAWDAGVIRRGIAEAAEQLALLKLPLKTLAPGEYRAYFTPTALGGLLSMLNWGGLSE 240
Query: 246 RSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKLKNT 305
+ ++ S L L G S + +L + GL P F + G + P+++ +I G+ +N+
Sbjct: 241 KEVRAKRSPLLKLAAGEARLSPRVSLAEAAGEGLSPLFQAEGFIRPDRVELIAAGEHRNS 300
Query: 306 LVSLRTETQYGVKSN--GAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSD 363
L+ R+ ++G++ N G +ESM+ + G L A++ LGTG+Y+SN YLN+SD
Sbjct: 301 LIGPRSAREFGLEPNAGGDEYAESMQ---LAAGELPRDQALQALGTGVYLSNLWYLNFSD 357
Query: 364 TSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYG 423
S+ R+TGMTRFAC WVEDG+IVAP+ MR+D+SLY++ GE L A+T E + +T +Y
Sbjct: 358 RSACRITGMTRFACFWVEDGRIVAPLGVMRFDDSLYSVLGEQLEALTAERELLVDTASYS 417
Query: 424 SRSTGGASLPGILVKDFNCTL 444
R+T LPG LVK +L
Sbjct: 418 GRATQSKLLPGALVKSLRFSL 438
>gi|67156493|ref|ZP_00418086.1| conserved hypothetical protein [Azotobacter vinelandii AvOP]
gi|67086252|gb|EAM05722.1| conserved hypothetical protein [Azotobacter vinelandii AvOP]
Length = 439
Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 145/442 (32%), Positives = 227/442 (51%), Gaps = 3/442 (0%)
Query: 3 MSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWK 62
M+ +E+F + D + L E ++ + E S F+RF++A+VRQ G V Q + + +
Sbjct: 1 MNAREHFHDLLDSLRPLLRGDEGFTLDYRAEDSEFVRFNRARVRQAGQVRQIHATLALYL 60
Query: 63 KNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLL 122
R F + ++E+D+ AL+ R + L D Y + S + G
Sbjct: 61 GERHARFELSLSGTIEEDRPRLRHALERLRALVPALAPDPYLRLEREPWRSESSEAGAPP 120
Query: 123 PEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGI 182
IL LD G+++ G +G +S GA W +F D+S++ NG+ +
Sbjct: 121 EVATAVGQILDAAAGLDLVGIHAAGPQYQGFASSWGAFGWHAASSFNFDWSLFHANGQAV 180
Query: 183 KSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNG 242
KS Y+G W + ++ AR+ LE L P LAPG Y+A+++ AL ++ D G
Sbjct: 181 KSAYAGQRWDAGTFARRMASARERLEYLGRPALTLAPGDYRAYLAPAALDEILDMLG-GG 239
Query: 243 FSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKGKL 302
FS +++ G+S L G S L + + GL PAF GE L ++ G
Sbjct: 240 FSAQALASGASPLQRLFAGSARLSPLVTLDERVAGGLAPAFT--GEGPRRDLRLLAAGLP 297
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
L+ R+ +YG+ +NGA E S+ + G L+E D + L TG+YI N YLN+S
Sbjct: 298 GERLIGSRSAAEYGLTANGAGDHEHPLSLAMAGGELDERDILARLDTGLYIGNLWYLNFS 357
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + R+TGMTRFA WVE+G+I AP+ MR+D+S+++ G +L A+T+E GTY
Sbjct: 358 DRPAGRLTGMTRFATFWVENGRIQAPVGTMRFDDSVFDFLGPHLEALTREPETILPAGTY 417
Query: 423 GSRSTGGASLPGILVKDFNCTL 444
G+R +G +LPG L+ F TL
Sbjct: 418 GARQSGSRTLPGALLGRFTLTL 439
>gi|124266620|ref|YP_001020624.1| hypothetical protein Mpe_A1427 [Methylibium petroleiphilum PM1]
gi|124259395|gb|ABM94389.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 444
Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 127/444 (28%), Positives = 232/444 (52%), Gaps = 5/444 (1%)
Query: 3 MSFKEYFESIADFMLSELLEG-EKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFW 61
++ + +F+++AD + +G +++S++ + E S F+RF++A +RQ V Q +
Sbjct: 4 LTERPHFDALADSVCRA--DGVDRVSLALNAEASDFLRFNRAALRQATHVLQAQATLAVV 61
Query: 62 KKNRTHNFSFGIQMSMEKD-KRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGK 120
+ R S + + D +R+ AE D + L+P+D + +PE + +S G
Sbjct: 62 RGRRHTESSLTLTGDLALDTQRLLAERTLLIHD-LSLIPDDPWLLLPEEAHSSDRDDRGA 120
Query: 121 LLPEDKIPETILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGR 180
L + + + LDF G Y+ G + + S GA HW + E+F ++ + +
Sbjct: 121 LPSPAAVIDAVREHADGLDFVGFYAGGPVVRAYADSLGARHWRRVESFDFEWCLVHAADK 180
Query: 181 GIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSW 240
+K+ Y GT WS +++ ++ +A L +L P + L PG Y+A S A+ ++ W
Sbjct: 181 AVKTQYGGTAWSLSEFAARLREAAAQLALLRQPARALPPGAYRALFSPAAMNELLATLGW 240
Query: 241 NGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSIIEKG 300
+GF ++ + G S+ L G L++ G PAF ++G + P ++ ++ G
Sbjct: 241 SGFGLKARRTGVSSLAKLAHGDARLHPSVRLSEAPGHGFTPAFTADGFVRPAEVLLVSDG 300
Query: 301 KLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLN 360
+ +TL + R+ +YG+ +NGA +E+ ++ + G L ++ LG+G+ +SN YLN
Sbjct: 301 RAVDTLNAPRSAREYGLPANGANAAETPEALALAPGALPHGRLLETLGSGLCVSNLWYLN 360
Query: 361 WSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTG 420
+SD + R+TGMTRFAC WVE G++ AP+ MR+D+S +FG+ L+ + ++
Sbjct: 361 YSDRQACRMTGMTRFACFWVEGGELAAPLEVMRFDDSFLRLFGDGLVGLGDRCERMPDSS 420
Query: 421 TYGSRSTGGASLPGILVKDFNCTL 444
TY SR + P LV + TL
Sbjct: 421 TYQSRQLASITAPAALVDGWRLTL 444
>gi|119877160|ref|ZP_01644182.1| peptidase U62, modulator of DNA gyrase [Stenotrophomonas
maltophilia R551-3]
gi|119820320|gb|EAX22934.1| peptidase U62, modulator of DNA gyrase [Stenotrophomonas
maltophilia R551-3]
Length = 444
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 103/424 (24%), Positives = 184/424 (43%), Gaps = 40/424 (9%)
Query: 38 MRFSKAKVRQNGMVDQGYFSCT--FWKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSI 95
+RF+ V +G+VD + T F K+ T + + ++E+ R A + + A ++
Sbjct: 37 IRFALNNVSTSGIVDNTELAVTVAFGKRVGTASINEFDDAALERVVRRAEDLARLAPENP 96
Query: 96 MLLP---EDKYQSIPEASQTSSAIYTGKLLPEDKIPETILSPVKD--LDFAGLYSQGVIC 150
+P + Y++ P S++++AI K+ ++P + L AG G
Sbjct: 97 EFMPAIGKQSYRASPTFSESTAAIDPAF---RAKVAADSIAPCRGHGLIAAGFLEDGQGF 153
Query: 151 KGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTEWSDAQYKLKIEQ-----ARK 205
+ S G + +T F +V E+GRG S + G DA K +Q RK
Sbjct: 154 QATANSNGNFAYQRTTNFDYTCTVRTEDGRG--SGWVGRNLKDAA-DFKADQDIRIAMRK 210
Query: 206 GLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSMQQGSSAYLALKEG---- 261
E K L PGKY + A + F N FS RS +G S +L+ K G
Sbjct: 211 ATE--SAEAKALEPGKYTVILEPAAAAGLISFM-MNFFSARSADEGRS-FLSKKGGGNKL 266
Query: 262 -REHFSDKFNLTQDFSLGLEPAFNSNGELAP-EKLSIIEKGKLKNTLVSLRTETQYGVKS 319
+ + + + D P + E P E+++IIE GK+ N S ++ +
Sbjct: 267 GEQVYDPRVTMFADPWHPDAPVLPWDNEGMPRERIAIIENGKIANLDYS-----RFWAQK 321
Query: 320 NGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSARVTGMTRFACLW 379
G S ++++ G+ + A+ V+ GI ++ Y+ D + +TG+TR +
Sbjct: 322 QGKTAKASPGNLLMSGGDKSTAELVRGTQKGILVTRTWYIRMVDPQTVLLTGLTRDGTFY 381
Query: 380 VEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRSTGGASLPGILVKD 439
+E+G+I P+ + R++ES M N+ + K R+ + Y +P + ++D
Sbjct: 382 IENGQIKHPVKNFRFNESPVIML-NNIEELGKPVRVAGDESNY------VMMIPPMKLRD 434
Query: 440 FNCT 443
F T
Sbjct: 435 FTFT 438
>gi|78045647|ref|YP_361822.1| putative modulator of DNA gyrase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78034077|emb|CAJ21722.1| putative modulator of DNA gyrase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 444
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 105/444 (23%), Positives = 186/444 (41%), Gaps = 42/444 (9%)
Query: 19 ELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQG--YFSCTFWKKNRTHNFSFGIQMS 76
+L + ++ + + +G +RF+ V +G+VD F K+ + S
Sbjct: 18 KLSKADECTATLTGSIDGNIRFALNNVSTSGIVDNTDLQVQVAFGKRVGVATINAFDDAS 77
Query: 77 MEKDKRMAAEALQEARDSIMLLP---EDKYQSIPEASQTSSAI---YTGKLLPEDKIPET 130
+E+ R A + + A ++ +P + Y+ P S++++A+ + ++ + P
Sbjct: 78 LERVVRRAEDLARLAPENPEFMPAVDKQTYRPSPTFSESTAAVDPAFRAQVAADSIAP-- 135
Query: 131 ILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTE 190
K L AG G S G + + F +V E+GRG S + G
Sbjct: 136 --CKGKGLIAAGFLEDGQSFTAFANSKGNFGYQRGARFDYTCTVRTEDGRG--SGWVGRN 191
Query: 191 WSDAQYKLKIEQ-----ARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSE 245
DA K EQ RK + K L PGKY + A + F N F
Sbjct: 192 LKDAA-DFKAEQDIRIAMRKASD--SAEAKALEPGKYTVILEPAAAAGLISFM-MNFFDA 247
Query: 246 RSMQQGSSAYLALKEG-----REHFSDKFNLTQDFSLGLEPAFNSNGELAP-EKLSIIEK 299
R +G S +L+ K G + + + N+T D + E P EK+SI+E
Sbjct: 248 RMADEGRS-FLSKKGGGNKLGEQVYDPRVNITADPWDPRAAVMPWDEEGLPREKMSIVEN 306
Query: 300 GKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYL 359
GK+ N S + G ++ G P ++++ G+ N A+ V+ GI ++ Y+
Sbjct: 307 GKIANLQYSRFWAQKNGKRAVGEP-----GNLLMAGGDKNIAELVRGTEKGILVTRTWYI 361
Query: 360 NWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANT 419
D + +TG+TR ++E+G+I P+ + R++ES M N+ + K R+
Sbjct: 362 RMVDPQTVLLTGLTRDGTFYIENGQIKYPVKNFRFNESPVIML-NNIDELGKPVRV---- 416
Query: 420 GTYGSRSTGGASLPGILVKDFNCT 443
G S +P + ++DF T
Sbjct: 417 --AGDESNFVMMIPPMRLRDFTFT 438
>gi|126648483|ref|ZP_01720970.1| TldD protein [Algoriphagus sp. PR1]
gi|126575367|gb|EAZ79699.1| TldD protein [Algoriphagus sp. PR1]
Length = 438
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 104/466 (22%), Positives = 200/466 (42%), Gaps = 63/466 (13%)
Query: 1 MKMSFKEYFESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCT- 59
M + KE + I D LS + ++ +S SG K+ +R+++ V +G + + T
Sbjct: 1 MAILTKEEAKQIIDKTLS-FAKADETEVSISGGKTGNIRYARNTVNTSGETNSISLNITS 59
Query: 60 -FWKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPED-KYQSI--PEASQTSSA 115
F K++ + + + E D +A+ A + L PE+ +Y + P+ + +
Sbjct: 60 VFGKQSGSTSIN-------ELDDESLKKAVARAEEIAKLAPENPEYMPMLGPQEYKETKT 112
Query: 116 IY--TGKLLPEDKIPETI--LSPVKD---------LDFAGLYSQGVICKGVITSAGASHW 162
+ T ++ P+ + I + P D DF+G + G S G +
Sbjct: 113 FFDSTDQIDPDYRAQLAIDSIKPCVDNNLTAAGYLEDFSGFTAMG-------NSKGMFGY 165
Query: 163 FQTETFVLDYSVWLENGRGIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQ--KKLAPG 220
+ + +D++V + G S YSG +++D ++ Q + + PG
Sbjct: 166 NKGTS--VDFTVTVRTNDGTGSGYSGADFNDVNLLKSGSVTNLAVQKAMASQNAQAIEPG 223
Query: 221 KYKAFISADALLDVTDFFSWNGFSERSMQQGSSAYLALKEG-----REHFSDKFNLTQDF 275
KY + A D+ ++ G RS +G S +++ K G + F ++ N+ D
Sbjct: 224 KYTVILEPRAASDLLGRLTF-GLDARSADEGRS-FMSKKGGGTRIGEKIFDERVNIYSDP 281
Query: 276 SLGLEPAFNSNGELAP-EKLSIIEKGKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIG 334
+ P +G+ P EK +E G +KN S + GV+ P R ++
Sbjct: 282 ANTEIPVAPWSGDGLPLEKTQWVENGVVKNLFYSRYWADKQGVEPVPRP-----RGVIFE 336
Query: 335 TGNLNEADAVKELGTGIYISNFNYLNWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRW 394
G+ + AD V+ G+ ++ F Y+ D + TG+TR ++EDG+I P+ + R+
Sbjct: 337 GGDESLADMVRSTERGVLVTRFWYIRSVDPQTLLFTGLTRDGTFYIEDGQIKFPVKNFRF 396
Query: 395 DESLYNMFGENLLAVTKESRIFANTGTYGSRSTGGASLPGILVKDF 440
+ES M N+ ++ K R+ G+ +P + ++DF
Sbjct: 397 NESPIIML-NNIESMGKPQRV------------DGSLVPAMKIRDF 429
>gi|21240894|ref|NP_640476.1| TldD protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21106170|gb|AAM35012.1| TldD protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 444
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 105/444 (23%), Positives = 186/444 (41%), Gaps = 42/444 (9%)
Query: 19 ELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQG--YFSCTFWKKNRTHNFSFGIQMS 76
+L + ++ + + +G +RF+ V +G+VD F K+ + S
Sbjct: 18 KLSKADECTATLTGSIDGNIRFALNNVSTSGIVDNTDLQVQVAFGKRVGVATINEFDDAS 77
Query: 77 MEKDKRMAAEALQEARDSIMLLP---EDKYQSIPEASQTSSAI---YTGKLLPEDKIPET 130
+E+ R A + + A ++ +P + Y+ P S++++AI + ++ + P
Sbjct: 78 LERVVRRAEDLAKLAPENPEFMPAVDKQTYRPSPTFSESTAAIDPAFRAQVAADSIAP-- 135
Query: 131 ILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTE 190
K L AG G S G + + F +V E+GRG S + G
Sbjct: 136 --CKGKGLIAAGFLEDGQSFTAFANSKGNFGYQRGARFDYTCTVRTEDGRG--SGWVGRN 191
Query: 191 WSDAQYKLKIEQ-----ARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSE 245
DA K EQ RK + K L PGKY + A + F N F
Sbjct: 192 LKDAA-DFKAEQDIRIAMRKASD--SAEAKALEPGKYTVILEPAAAAGLISFM-MNFFDA 247
Query: 246 RSMQQGSSAYLALKEG-----REHFSDKFNLTQDFSLGLEPAFNSNGELAP-EKLSIIEK 299
R +G S +L+ K G + + + N+T D + E P EK++I+E
Sbjct: 248 RRADEGRS-FLSKKGGGNKLGEQVYDPRVNITADPWDPRAAVMPWDEEGLPREKMAIVEN 306
Query: 300 GKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYL 359
GK+ N S + G ++ G P ++++ G+ N A+ V+ GI ++ Y+
Sbjct: 307 GKIANLQYSRFWAQKNGKRAVGEP-----GNLLMAGGDKNIAELVRGTEKGILVTRTWYI 361
Query: 360 NWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANT 419
D + +TG+TR ++E+G+I P+ + R++ES M N+ + K R+
Sbjct: 362 RMVDPQTVLLTGLTRDGTFYIENGQIKYPVKNFRFNESPVIML-NNIDELGKPVRV---- 416
Query: 420 GTYGSRSTGGASLPGILVKDFNCT 443
G S +P + ++DF T
Sbjct: 417 --AGDESNFVMMIPPMRLRDFTFT 438
>gi|119483246|ref|ZP_01618660.1| hypothetical protein L8106_04316 [Lyngbya sp. PCC 8106]
gi|119458013|gb|EAW39135.1| hypothetical protein L8106_04316 [Lyngbya sp. PCC 8106]
Length = 448
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 101/438 (23%), Positives = 179/438 (40%), Gaps = 42/438 (9%)
Query: 22 EGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHNFSF------GIQM 75
E E++ +S S + R+S+ ++ QN + S T + R+ S I+
Sbjct: 27 EAEEVFVSISNSEEALTRYSENQITQNVSSTRFSLSITSYFGKRSATASTTELDPDAIKA 86
Query: 76 SMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIPETILSPV 135
++++ + +A A ++ +L P+ Y++ A ++A ++ E +S
Sbjct: 87 AIKRSEELATIAPEDPEWVAVLEPQ-TYENRTPAFDHATACFSPLQRGERVQTVCQMSTE 145
Query: 136 KDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTEWSDAQ 195
++ +G S + S G + + ++ ++NG S S D
Sbjct: 146 AKVEGSGTLSSEAEVFAIGNSRGLRACNRLTSADFGFTAKIDNGSAW-SRRSAISIEDLP 204
Query: 196 YKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWN----------GFSE 245
E PQ+ + PG Y A ++ + +N F
Sbjct: 205 LTSLTETIINRAYSARHPQE-VQPGVYPVIFDGAAFAELLMWVMFNLDARAADEGRSFMS 263
Query: 246 RSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGL--EPAFNSNGELAPEKLSIIEKGKLK 303
R + G A L E FS N+ ++ S L F ++G L + L II+ G L+
Sbjct: 264 RMDESGKPAGNRLAEAL--FSPMVNVQRNPSHPLIGGSTFFADG-LKKDDLEIIKDGVLQ 320
Query: 304 NTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSD 363
S Q GV+ GA M +V+ N + AD + + GI +S Y+ + +
Sbjct: 321 TLSYSRYWAAQKGVQPTGA-----MYPVVMAGDNQSLADLIAQTERGILVSRAWYVRYVN 375
Query: 364 TSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYG 423
+ VTGMTR W+EDGKI PI ++R++++L M L +V S++
Sbjct: 376 PRTLEVTGMTRDGTFWIEDGKIAYPIKNLRFNQNLPEM----LASVDGLSQV-------- 423
Query: 424 SRSTGGASLPGILVKDFN 441
GG+ +PG+ VK FN
Sbjct: 424 -HRYGGSVVPGVRVKAFN 440
>gi|16127056|ref|NP_421620.1| TldD/PmbA family protein [Caulobacter crescentus CB15]
gi|13424432|gb|AAK24788.1| TldD/PmbA family protein [Caulobacter crescentus CB15]
Length = 441
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 94/407 (23%), Positives = 179/407 (43%), Gaps = 36/407 (8%)
Query: 10 ESIADFMLSELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYF--SCTFWKKNRTH 67
++I D +L +L ++ + +G +RF+ V +G+V S F ++ T
Sbjct: 10 KTILDKVL-KLSTADECTAQLTGSIEGNIRFALNNVSTSGVVSDTNLGVSVAFGRRVGTA 68
Query: 68 NFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTGKLLPEDK- 126
+ + S+ + + A E + A ++ +P + Q +S S+A T + PE +
Sbjct: 69 STNDFSDASLARAVKRAEELARLAPENPEFVPAVEKQVYKPSSTFSAA--TAAITPEQRA 126
Query: 127 -IPETILSP--VKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRG-- 181
I ++P K+L AG + S GA + ++ +V +GRG
Sbjct: 127 EIAMASIAPCRAKNLIAAGFLNDEQSFVAFANSKGAFGYQRSTDMDYTCTVRTADGRGSG 186
Query: 182 --IKSLYSGTEWSDAQ-YKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFF 238
+SL T + A ++ + +A E + L PGKY + A + F
Sbjct: 187 WVARSLQDSTSFKPASDIEIAMRKASASAEA-----QALEPGKYTVILEPAAASGLISFM 241
Query: 239 SWNGFSERSMQQGSSAYLALKEG-----REHFSDKFNLTQDF---SLGLEPAFNSNGELA 290
+N F R +G S +L+ K G + + + D L + P +++ G A
Sbjct: 242 -FNFFDARQADEGRS-FLSKKGGGNKLGEQVYDPRVTFMSDPWHPELAVLP-WDATGR-A 297
Query: 291 PEKLSIIEKGKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTG 350
EK++++E GK+ N + T Y + G P+ +I++ G + AD V+E G
Sbjct: 298 REKMAMVENGKIANLIY-----TPYWAQKQGKPVVGRPGNIIMSGGTKSTADLVRETERG 352
Query: 351 IYISNFNYLNWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDES 397
I ++ Y+ D + +TG+TR ++E+G++ P+ + R++ES
Sbjct: 353 ILVTRTWYIRMVDPQTVLLTGLTRDGTFYIENGQLKYPLKNFRFNES 399
>gi|109899792|ref|YP_663047.1| peptidase U62, modulator of DNA gyrase [Pseudoalteromonas atlantica
T6c]
gi|109702073|gb|ABG41993.1| peptidase U62, modulator of DNA gyrase [Pseudoalteromonas atlantica
T6c]
Length = 444
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 93/405 (22%), Positives = 171/405 (42%), Gaps = 52/405 (12%)
Query: 59 TFWKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYT 118
TF K+ T + S+EK R + E + A ++ +P ++ +A+ + T
Sbjct: 60 TFGKRTGTATINEFDNASLEKVVRRSEELAKLAPENEEFMPIFGKKTYAKANTYFDS--T 117
Query: 119 GKLLPEDKIPETI--LSPVKD--LDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSV 174
+ PED+ + P K L AG V ++ S G + T T V D+SV
Sbjct: 118 ANVTPEDRAQAAFDSIEPSKKNKLIAAGFLEDAVEMSAIMNSKGL-FAYNTSTNV-DFSV 175
Query: 175 WLENGRGIKSLYSGTEWSDAQY-------KLKIEQARKGLEVLHTPQKKLAPGKYKAFIS 227
+ G S ++ +SD + + I++++ + K++ PGKY +
Sbjct: 176 TIRTEDGKGSGWASGNYSDVKLLDTAKLSSIAIQKSKGSADA-----KEMEPGKYTVILE 230
Query: 228 ADALLDVTDFFSWNGFSERSMQQGSSAYLALKE-----------GREHFSDKFNLTQDFS 276
A + + F +RS +G S +L+ K G++ F ++ ++ D
Sbjct: 231 PAASIGLIQNM-MRAFDQRSADEGRS-FLSNKSATGEDAPKNKLGQKMFDERVHIYSDPQ 288
Query: 277 LGLEPAFNSNGELAP-EKLSIIEKGKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGT 335
+ P+ G P K+ I+ G +KN + Y K + S R+I++
Sbjct: 289 HAIAPSAPFAGNGYPLNKIDWIKDGTIKNM-----PNSPYWAKHTKSEYIPSNRNILMSG 343
Query: 336 GNLNEADAVKELGTGIYISNFNYLNWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWD 395
G+ + D +K G+ ++ Y+ D + TG+TR ++E+GKI PI + R++
Sbjct: 344 GDQSLEDMIKNTRRGVLVTRLWYIRGLDPQTLLYTGLTRDGTFYIENGKIKYPIKNFRFN 403
Query: 396 ESLYNMFGENLLAVTKESRIFANTGTYGSRSTGGASLPGILVKDF 440
ES M N+ A+ K RI G+ +P + ++DF
Sbjct: 404 ESPIIML-NNIEALGKPQRI------------EGSMIPPMKIRDF 435
>gi|21229571|ref|NP_635488.1| TldD protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66766444|ref|YP_241206.1| TldD protein [Xanthomonas campestris pv. campestris str. 8004]
gi|21111041|gb|AAM39412.1| TldD protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66571776|gb|AAY47186.1| TldD protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 444
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 103/444 (23%), Positives = 183/444 (41%), Gaps = 42/444 (9%)
Query: 19 ELLEGEKISISFSGEKSYFMRFSKAKVRQNGMVDQG--YFSCTFWKKNRTHNFSFGIQMS 76
+L + ++ + +G +RF+ V +G+VD F K+ + S
Sbjct: 18 KLSKADECTAQLTGSIDGNIRFALNNVSTSGIVDNTDLQVQVAFGKRVGVATINEFDDAS 77
Query: 77 MEKDKRMAAEALQEARDSIMLLP---EDKYQSIPEASQTSSAI---YTGKLLPEDKIPET 130
+E+ R A + + A ++ +P + Y + P S++++AI + ++ + P
Sbjct: 78 LERVVRRAEDLARLAPENPEFMPAVDKQTYTASPTFSESTAAIDPAFRAQVAADSIAP-- 135
Query: 131 ILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTE 190
K L AG G S G + + F +V E+GRG S + G
Sbjct: 136 --CKGKGLIAAGFLEDGQSFTAFANSKGNFGYQRGARFDYTCTVRTEDGRG--SGWVGRN 191
Query: 191 WSDAQYKLKIEQ-----ARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSE 245
DA K EQ RK + K L PGKY + A + F F
Sbjct: 192 LKDAA-DFKAEQDVRIAMRKASD--SAEAKALEPGKYTVILEPAAAAGLISFM-MRYFDA 247
Query: 246 RSMQQGSSAYLALKEG-----REHFSDKFNLTQDFSLGLEPAFNSNGELAP-EKLSIIEK 299
R +G S +L+ K G + + + N+T D + E P EK+ I+E
Sbjct: 248 RMADEGRS-FLSKKGGGNKLGEQVYDPRVNITADPWDPRAAVLPWDEEGLPREKMPIVEN 306
Query: 300 GKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYL 359
GK+ N S + G ++ G P ++++ G N A+ V+ GI ++ Y+
Sbjct: 307 GKIANLQYSRFWAQKNGKRAIGEP-----GNLLMAGGEKNIAELVRGTEKGILVTRTWYI 361
Query: 360 NWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANT 419
D + +TG+TR ++E+G+I P+ + R++ES M N+ + K R+ +
Sbjct: 362 RMVDPQTVLLTGLTRDGTFYIENGQIKYPVKNFRFNESPIIML-NNIDELGKPVRVAGDE 420
Query: 420 GTYGSRSTGGASLPGILVKDFNCT 443
+Y +P + ++DF T
Sbjct: 421 SSY------VMMIPPMRLRDFTFT 438
>gi|118743644|ref|ZP_01591646.1| Zn-dependent protease [Geobacter lovleyi SZ]
gi|118683387|gb|EAV89784.1| Zn-dependent protease [Geobacter lovleyi SZ]
Length = 620
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 216 KLAPGKYKAFISADALLDVTDFFSWNGFSERSMQQGSSAYLALKEGREHFSDKFNLTQDF 275
+LA G+Y + A+ ++ D ++ GF SM++G S + G++ S +F L+ D
Sbjct: 223 QLALGRYDVVFGSAAIAELIDIMNFIGFDGGSMKRGFSFITGDQVGQKVLSSRFTLSDDP 282
Query: 276 SLGLEPAFNSNGELAPEK-LSIIEKGKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIG 334
+ F + P K I G ++ S ++G G + +S+V+
Sbjct: 283 TCLDTFPFQRDFMGMPRKPFPIFANGVFRSFTWSQDDADEFGTAPTGHTVMH--KSLVLA 340
Query: 335 TGNLNEADAVKEL------GTGIYISNFNYLNWSDTSSARVTGMTRF-ACLWVEDGKIVA 387
GN + +KEL +YI + +YLN + S+ +T +RF A L ++G +V
Sbjct: 341 GGN-TQVSTLKELVDLPHSNDLLYIPSLHYLNIVNPSTGLITASSRFGALLLTKEGSVVV 399
Query: 388 PIADMRWDESLYNMFGENLLAVTKESRIFANT-GTYGSRSTGGASLPGIL 436
P ++R +SL ++FG N LA ++++ +NT +YG+R+ +P +
Sbjct: 400 PY-NVRITQSLLDIFG-NRLAWLSQTQVVSNTSSSYGARNPTAIVVPAFV 447
>gi|86141411|ref|ZP_01059957.1| TldD protein [Flavobacterium sp. MED217]
gi|85831970|gb|EAQ50425.1| TldD protein [Leeuwenhoekiella blandensis MED217]
Length = 438
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 102/435 (23%), Positives = 180/435 (41%), Gaps = 48/435 (11%)
Query: 28 ISFSGEKSYFMRFSKAKVRQNGMVDQGYFSC--TFWKKNRTHNFSFGIQMSMEKDKRMAA 85
++ G +S +R+++ V G + +F KK+ T S+EK R +
Sbjct: 27 MNLGGSESGNIRYARNTVSTAGHQSNQSLAVVSSFGKKSGTATIDEFDDESLEKVVRRSE 86
Query: 86 EALQEARDSIMLLPEDKYQSIPEASQT--SSAIY---TGKLLPEDK--IPETILSPV--K 136
E Q L PE+ P QT S Y T + PE + + + P +
Sbjct: 87 ELAQ-------LSPENPEYMEPLGPQTYDESITYVEATANVTPEYRAEVAANSIKPAAEQ 139
Query: 137 DLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTEWSDAQY 196
D+ AG G ++ S G + ++ +D++V + G S + +++D
Sbjct: 140 DVTAAGFLDDGAGFSAMLNSNGLFAYNKSTN--VDFTVTMRTNDGTGSGWVTRDYNDIT- 196
Query: 197 KLKIEQARK---GLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSMQQGSS 253
K E+A V+ + + PG+Y + A D+ F F+ R+ +G S
Sbjct: 197 KFDAEEASAIAIDKAVMSREARAIEPGRYTVILEPAAASDLLGRFR-GAFNARTADEGRS 255
Query: 254 AYL----ALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAP-EKLSIIEKGKLKNTLVS 308
K G + ++ N+ D PA +G+ P +K IE G +KN
Sbjct: 256 FMSKEGGGTKLGEKIVDERVNIWSDPLHPDVPASTWSGDGLPRKKTQWIENGVVKNLAYD 315
Query: 309 LRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSAR 368
+Q GV+ P + +M ++ G+ + + +K GI ++ F Y+ D +
Sbjct: 316 RYWASQQGVEP--VPFAANM---IMEGGDTSFEEMIKSTKRGILVTRFWYIRSVDPQTLL 370
Query: 369 VTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRSTG 428
TG+TR ++E+G+I P+ + R++ES M NL A+ K+ R+ N
Sbjct: 371 FTGLTRDGTFYIENGQIKYPVKNFRFNESPIIML-NNLEALGKQVRVNGNL--------- 420
Query: 429 GASLPGILVKDFNCT 443
LP + V+DF T
Sbjct: 421 ---LPYMKVRDFTFT 432
>gi|120436286|ref|YP_861972.1| DNA gyrase modulator family protein [Gramella forsetii KT0803]
gi|117578436|emb|CAL66905.1| DNA gyrase modulator family protein [Gramella forsetii KT0803]
Length = 437
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 93/414 (22%), Positives = 170/414 (41%), Gaps = 27/414 (6%)
Query: 23 GEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCT--FWKKNRTHNFSFGIQMSMEKD 80
+ I+ G +S +R+++ V G + T F KK+ T S+EK
Sbjct: 22 ADSCEINMGGSESGNIRYARNTVTTAGHQSNQTLAVTSSFGKKSGTATIDEFDDASLEKV 81
Query: 81 KRMAAEALQEARDSIMLLPEDKYQSIPEASQTSSAIYTG--KLLP--EDKIPETILSPV- 135
+ A E + + ++ PE P+ Q S G + P K+ + + P
Sbjct: 82 IKRAEELAKLSPEN----PEFMEPLGPQTYQDSKGFIEGTANIQPAYRAKVAASSIEPAS 137
Query: 136 -KDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTEWSDA 194
KD+ AG + S G + Q+ +D++V + G S + +++D
Sbjct: 138 AKDVTAAGFLEDSAGFSAKMNSKGLFAYNQSTN--VDFTVTMRTNDGTGSGWVTRDYNDI 195
Query: 195 QYKLKIEQARKGLE--VLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSMQQGS 252
E A+ ++ V+ K + PGKY + A +D+ + F+ R+ +G
Sbjct: 196 SKFNPEEAAKVAIDKAVMSREAKAIEPGKYTVILEPAASVDLLGNMA-GSFNARTADEGR 254
Query: 253 SAYL---ALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAP-EKLSIIEKGKLKNTLVS 308
S K G + ++ N+ D P NG+ P +K++ IE G +KN S
Sbjct: 255 SFMSKDGGTKMGEKIVDERVNIWSDPQHPDVPTSTWNGDGLPLKKMNWIENGVVKNLAYS 314
Query: 309 LRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSAR 368
+Y K G + ++ G+ + + +K GI ++ Y+ D +
Sbjct: 315 -----RYWAKEKGVEPVPFPSNFIMAGGDASREELIKSTKKGILVTRLWYIRGVDPQTLL 369
Query: 369 VTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
TG+TR ++E+G+I P+ + R++ES M NL + ++ RI N Y
Sbjct: 370 YTGLTRDGTFYIENGEIKYPVKNFRFNESPIIML-NNLEELGEQVRIDGNLIPY 422
>gi|94970792|ref|YP_592840.1| peptidase U62, modulator of DNA gyrase [Acidobacteria bacterium
Ellin345]
gi|94552842|gb|ABF42766.1| peptidase U62, modulator of DNA gyrase [Acidobacteria bacterium
Ellin345]
Length = 465
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 103/453 (22%), Positives = 187/453 (41%), Gaps = 46/453 (10%)
Query: 24 EKISISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCTFWKKNRTHNFSFGIQMSMEKDKRM 83
+++ + SG RF+ V QN + FS RT + + E KR+
Sbjct: 21 DEVELLVSGGNFALTRFANNGVTQNVSEENYSFSVRVNLDGRTARATTN-KRDAESLKRV 79
Query: 84 A--AEAL---QEARDSIMLLPEDK-----YQSIPEASQTSSAIYTGKLLPEDKIP--ETI 131
AEAL Q+ ++ +P + + +P+A + T + D+ E +
Sbjct: 80 VEQAEALARVQQQDPDLLPMPTPREVASHSEGLPDAPPSRYFEATAAMTAGDRAQQVERM 139
Query: 132 LSPVKD--LDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGT 189
++ + L AG YS G +GV S G + W + + ++ EN G + S
Sbjct: 140 VTAGRKHGLTAAGTYSSGAHMEGVFNSRGVTQWHEQSSAEASITMLGENSSGWQKANSTN 199
Query: 190 EWSDAQYKLKIEQARKGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSMQ 249
KL A K L K+L GKY + A+LD+ F W+ FS ++
Sbjct: 200 ADDFDAAKLAEIAAEKA--SLSADPKELPAGKYTVVLEPSAVLDIVGFMFWD-FSGLALL 256
Query: 250 QGSSAYLALKEGREHFSDKFNLTQDFSLGLEPAFNSNGE-LAPEKLSIIEKGKLKNTL-- 306
S +L + G++ F D+ N++ D L+ F +GE + +++++E G K
Sbjct: 257 DQRS-FLNDRVGKQIFGDELNISDDVYHPLQSGFAFDGEGMRRSRVNLVEGGVPKRVTFA 315
Query: 307 ---VSLRTETQYG-----VKSNG------APLSESMRSIVIGTGNLNEA--DAVKELGTG 350
+L +++ G V++ G + E+ +IV + V + G
Sbjct: 316 RATAALMAKSELGRKVGSVQATGHGFALPNEMGEAPMNIVFAPPKDPKTVDQMVNNVEHG 375
Query: 351 IYISNFNYLNWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVT 410
I ++ Y+ + +TGMTR +E+GK+ + + R+++ L M N+ A++
Sbjct: 376 ILVTRLWYIREVEPYEKILTGMTRDGTFLIENGKVKHGVRNFRFNQGLIAML-SNIEAMS 434
Query: 411 KESRIFANTGTYGSRSTGGASLPGILVKDFNCT 443
R G S +P + V++FN T
Sbjct: 435 MPVR------ASGEESI-DMVVPAMTVREFNFT 460
>gi|94498575|ref|ZP_01305129.1| TldD protein [Sphingomonas sp. SKA58]
gi|94421939|gb|EAT06986.1| TldD protein [Sphingomonas sp. SKA58]
Length = 444
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 85/380 (22%), Positives = 158/380 (41%), Gaps = 37/380 (9%)
Query: 38 MRFSKAKVRQNGMVD--QGYFSCTFWKKNRTHNFSFGIQMSMEKDKRMAAEALQEARDSI 95
+RF++ V G+ D Q F K+ T + S+++ R A E + A ++
Sbjct: 37 VRFARNDVSTAGVTDDVQLAVQVAFGKRVGTATINQFDDASLQRVVRRAEELARLAPENP 96
Query: 96 MLLPEDKYQSIPEASQTSSAIYTGKLLPEDKIPETILSPVK--DLDFAGLYSQGVICKGV 153
+P Q+ + + S+ K+ + P + +L AG
Sbjct: 97 EFMPAVPQQTYLKTNTFSAPTAAIDPAYRAKVASDSIGPCRAENLVAAGYLEDQAGFVAF 156
Query: 154 ITSAGASHWFQTETFVLDYS--VWLENGRG-------IKSLYSGTEWSDAQYKLKIEQAR 204
+ S G ++ +QT T DY+ V ++GRG ++ + D + ++ A
Sbjct: 157 MNSKG-NYGYQTSTSS-DYTCTVRTQDGRGSGWVGHNVQDVAQFNAGEDIRVAMRKASAS 214
Query: 205 KGLEVLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSMQQGSSAYLALKEGREH 264
G + L PGKY + A + F + F RS +G S +L+ K G
Sbjct: 215 AGAQALE-------PGKYTVILEPAAAAGLVAFMMYF-FDARSADEGRS-FLSKKGGGNK 265
Query: 265 FSDKFNLTQDFSLGLEPAFN-------SNGELAPEKLSIIEKGKLKNTLVSLRTETQYGV 317
++ Q ++ +PA+ + L +K+ II+ GKL N ++Y
Sbjct: 266 LGEQVYGPQ-VTMFTDPAYPGAAVYPWDDEGLPRKKMPIIQNGKLMNM-----NYSRYWA 319
Query: 318 KSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSARVTGMTRFAC 377
+ G P +I++ G + AD ++ GI +S Y+ D + +TG+TR
Sbjct: 320 QKQGRPEQAGFGNIIMEGGTKSTADLIRTTERGILVSRTWYIRMVDPQTVLLTGLTRDGT 379
Query: 378 LWVEDGKIVAPIADMRWDES 397
++E+G+I P+ + R++ES
Sbjct: 380 FYIENGQIKYPVKNFRFNES 399
>gi|86132849|ref|ZP_01051440.1| TldD protein [Cellulophaga sp. MED134]
gi|85816555|gb|EAQ37742.1| TldD protein [Dokdonia donghaensis MED134]
Length = 438
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 97/434 (22%), Positives = 174/434 (40%), Gaps = 46/434 (10%)
Query: 28 ISFSGEKSYFMRFSKAKVRQNGMVDQGYFSCT--FWKKNRTHNFSFGIQMSMEKDKRMAA 85
++ G + +R+++ V G + T F K++ T E D
Sbjct: 27 VNLGGSQGGNIRYARNSVSTAGYQSNQSLAVTASFGKRSGTATID-------ELDDASLK 79
Query: 86 EALQEARDSIMLLPEDKYQSIPEASQT--SSAIY---TGKLLPEDK--IPETILSP--VK 136
+ +Q A + L PE+ P Q S + T + PE + + + ++P K
Sbjct: 80 KVVQRAEELAKLSPENPEYMEPLGPQQYDESKTFVEATANITPEYRAEVANSSITPAKTK 139
Query: 137 DLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTEWSDAQY 196
D+ AG G ++ S G + ++ + ++V + G S + +++D
Sbjct: 140 DVTAAGFLDDGQGFSAMMNSNGLFAYNKSTD--VSFTVTMRTNDGTGSGWVTRDYNDINK 197
Query: 197 KLKIEQARKGLE--VLHTPQKKLAPGKYKAFISADALLDVTDFFSWNGFSERSMQQGSSA 254
E ++ ++ V+ K + PGKY + A L + + RS +G S
Sbjct: 198 FDSSEASQVAIDKAVMSRQAKAIEPGKYTVILEPSAGLGLLQGLG-RSLNARSADEGRSF 256
Query: 255 YL----ALKEGREHFSDKFNLTQDFSLGLEPAFNSNGELAP-EKLSIIEKGKLKNTLVSL 309
K G + ++ NL D PA NG P +K + IE G +KN
Sbjct: 257 MSKEGGGTKLGEKIVDERVNLWSDPLNDEVPAATWNGAGQPLKKTTWIENGTVKNLAYG- 315
Query: 310 RTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWSDTSSARV 369
+Y K NG + ++G G+ + D +K GI ++ Y+ D +
Sbjct: 316 ----RYWAKENGVEPVPFPSNFIMGGGDASLDDLIKSTRKGILVTRLWYIRSVDPQTLLY 371
Query: 370 TGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTYGSRSTGG 429
TG+TR ++E+GKI P+ + R++ES M NL + K+ R+ G
Sbjct: 372 TGLTRDGTFYIENGKIKYPVKNFRFNESPIIML-NNLETLGKQVRV------------DG 418
Query: 430 ASLPGILVKDFNCT 443
+ +P + V+DF T
Sbjct: 419 SLIPYMKVRDFTFT 432
>gi|88805073|ref|ZP_01120593.1| TldD/PmbA family protein [Robiginitalea biformata HTCC2501]
gi|88785952|gb|EAR17121.1| TldD/PmbA family protein [Robiginitalea biformata HTCC2501]
Length = 438
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 98/420 (23%), Positives = 175/420 (41%), Gaps = 36/420 (8%)
Query: 22 EGEKISISFSGEKSYFMRFSKAKVRQNGMVDQGYF--SCTFWKKNRTHNFSFGIQMSMEK 79
+ + I+ SG S +R+++ V +G +F KK+ T S+EK
Sbjct: 21 KADACEINLSGSNSGNIRYARNTVSTSGHSSNQTLVVQSSFGKKSGTATIDEFDDASLEK 80
Query: 80 DKRMAAEALQEARDSIMLLPEDKYQSIPEASQT--SSAIY---TGKLLPE--DKIPETIL 132
R A E + L PE+ P Q S Y T + PE K+ + +
Sbjct: 81 VVRRAEELAR-------LSPENPEFMEPLGPQEYDDSLTYKESTANISPEYRAKVASSSI 133
Query: 133 SPV--KDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGTE 190
P +D+ AG ++ +I S G + + ++++V + G S + +
Sbjct: 134 DPAAAQDVTAAGFFNDSEGFSAMINSNGLFAYNRATD--MEFTVTMRTNDGTGSGWVSRD 191
Query: 191 WSDAQYKLKIEQARKGLE--VLHTPQKKLAPGKYKAFISADALLDVT-DFFSWNGFSERS 247
++D E ++ ++ V+ + + PGKY + A D+ + FS FS RS
Sbjct: 192 YNDVDKFDAAEASKIAIDKAVMSREARAIEPGKYTVILEPAASNDLLGNMFS--SFSARS 249
Query: 248 MQQGSSAYLAL----KEGREHFSDKFNLTQDFSLGLEPAFNSNGELAPEKLSI-IEKGKL 302
+G + A K G++ ++ + D P+ NG P K ++ IE G +
Sbjct: 250 ADEGRNFMSAPDGGNKLGQKIVDERVTIWSDPLHPDVPSATWNGSGQPLKKTMWIENGVV 309
Query: 303 KNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNFNYLNWS 362
KN Q GV+ P+ I+ G G+ + D ++ GI ++ Y+
Sbjct: 310 KNLAYDRYWAEQKGVE----PVPFPSNGIMAG-GDASLEDLIRSTNRGILVTRLWYIRSV 364
Query: 363 DTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIFANTGTY 422
D + TG+TR ++E+G+I P+ + R++ES M NL + ++ RI N Y
Sbjct: 365 DPQTLLYTGLTRDGTFYIENGQIKHPVKNFRFNESPIIML-NNLETLGQQVRIDGNLIPY 423
>gi|124003424|ref|ZP_01688273.1| TldD protein [Microscilla marina ATCC 23134]
gi|123990993|gb|EAY30445.1| TldD protein [Microscilla marina ATCC 23134]
Length = 438
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 87/387 (22%), Positives = 171/387 (44%), Gaps = 50/387 (12%)
Query: 76 SMEKDKRMAAEALQEARDSIMLLPE---DKYQSIPEASQTSSAI---YTGKLLPEDKIPE 129
S+EK R + E + + ++ +P +Y+ P ++++ I Y K+ + P
Sbjct: 77 SLEKVIRRSEELARLSPENPEYMPPLGPQQYKDTPTFVKSTADITPEYRAKVAADSIGP- 135
Query: 130 TILSPVKDLDFAGLYSQGVICKGVITSAGASHWFQTETFVLDYSVWLENGRGIKSLYSGT 189
+ KD+ AG + ++ S G + Q+ L +SV + G S +
Sbjct: 136 ---AAKKDVTAAGFLNDSAGFNAMMNSKGLFAFNQSTN--LSFSVTMRTNDGTGSGWVTR 190
Query: 190 EWSDAQYKLKIEQARKGLE--VLHTPQKKLAPGKYKAF---ISADALLDVTDFFSWNGFS 244
+++D + ++ L+ +L K + PGKY ++A+AL + + S G
Sbjct: 191 DYNDVKKFNSATASQISLDKALLSRKPKAIEPGKYTVILEPVAAEAL--IGNMISNMG-- 246
Query: 245 ERSMQQGSSAYLALKEGREHFSDKFNLTQDFSLGLEP--------AFNSNGELAPEKLSI 296
R +G S +LA K G +K + + ++ +P +++ NG+ +K+S
Sbjct: 247 ARQADEGRS-FLAKKGGGNKLGEKL-VDERITIYSDPWNKEVPSASWDGNGQ-PIQKMSW 303
Query: 297 IEKGKLKNTLVSLRTETQYGVKSNGAPLSESMRSIVIGTGNLNEADAVKELGTGIYISNF 356
IEKG +KN S +Y K G + + + ++ G+ + D +K G+ ++
Sbjct: 304 IEKGVVKNMFYS-----RYWAKKKGKIYTPAPSNGIMLGGSASIQDMIKSTKKGVLVTRL 358
Query: 357 NYLNWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAVTKESRIF 416
Y+ D + TG+TR ++E+GKI P+ + R++ES M NL + ++ R+
Sbjct: 359 WYIRSVDPQTLLYTGLTRDGTFYIENGKIKFPVKNFRFNESPVIML-NNLEELGQQQRVN 417
Query: 417 ANTGTYGSRSTGGASLPGILVKDFNCT 443
N +P + ++DF T
Sbjct: 418 GNL------------VPAMKIRDFTFT 432
>gi|48477933|ref|YP_023639.1| PmbA protein [Picrophilus torridus DSM 9790]
gi|48430581|gb|AAT43446.1| PmbA protein [Picrophilus torridus DSM 9790]
Length = 437
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 14/243 (5%)
Query: 180 RGIKSLYSGTEWSDAQYKLKIEQARKGLEVLHTPQKK-----LAPGKYKAFISADALLDV 234
R K +SG E +K I+ R G T +K + GKY +S AL +
Sbjct: 170 RSFKDGFSGQESVHTGFKFNIDPYRYGELAAETARKTSKKIDIDEGKYDIILSPYALGTI 229
Query: 235 TDFFSWNGFSERSMQQGSSAYLAL---KEGREHFSDKFNLTQDFSLGLEPAFNSNGELAP 291
+ S N FS ++ G S ++ L + G E+ + +G P + G L
Sbjct: 230 MTYNS-NFFSYYNIDAGISPFIDLLNSRVGPENLTLNDEPLNMNGIGYRPV-DDEGTLTS 287
Query: 292 EKLSIIEKGKLKNTLVSLRTETQYGVKS--NGAPLSESMRSIVIGTGNLNEADAVKELGT 349
K II+ G LK L S T + G + N + + I G+ + D + ++
Sbjct: 288 NK-KIIDHGVLKTYLHSYSTSVKAGTATTGNAGIIHPVPWQLSIEPGSRSYIDIINDIDA 346
Query: 350 GIYISNFNYLNWSDTSSARVTGMTRFACLWVEDGKIVAPIADMRWDESLYNMFGENLLAV 409
GI+I+N Y + D + + + R +++ G+IV ++ +R +S+ N+ NL V
Sbjct: 347 GIFINNSWYTRFQDQRAGIFSTVPRDGVFYIKHGEIVGSVSGIRISDSIINIL-RNLQEV 405
Query: 410 TKE 412
+ E
Sbjct: 406 SSE 408
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.316 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,645,991,668
Number of Sequences: 5470121
Number of extensions: 69168811
Number of successful extensions: 200889
Number of sequences better than 1.0e-05: 66
Number of HSP's better than 0.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 200774
Number of HSP's gapped (non-prelim): 66
length of query: 444
length of database: 1,894,087,724
effective HSP length: 136
effective length of query: 308
effective length of database: 1,150,151,268
effective search space: 354246590544
effective search space used: 354246590544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 131 (55.1 bits)