R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|6714305|gb|AAF26001.1|AC013354_20 (AC013354) F15H18.4 [Arabidopsis
thaliana]
Length = 1702
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 1702
0 500 1000 1500
Plus Strand HSPs:
Score = 645 (227.1 bits), Expect = 8.3e-61, P = 8.3e-61
Identities = 113/177 (63%), Positives = 139/177 (78%), Frame = +2
Query: 14 YVDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESKE 193
++DIHECD+FTMCIFCFPTSSVIPLHDHP M VFSK+LYGSLHVKAYDWVEPPCII +
Sbjct: 1526 FLDIHECDTFTMCIFCFPTSSVIPLHDHPEMAVFSKILYGSLHVKAYDWVEPPCIITQDK 1585
Query: 194 --PGYAQVRLAKLAVDKVLNAPCDTSVLYPKHGGNLHCFTAVTPCAMLDILTPPYREEEG 367
PG RLAKL DKV+ + LYPK GGNLHCFTA+TPCA+LDIL+PPY+E G
Sbjct: 1586 GVPGSLPARLAKLVSDKVITPQSEIPALYPKTGGNLHCFTALTPCAVLDILSPPYKESVG 1645
Query: 368 RRCTYYHDYPYSAFSVANA--PICDGEEEEYAWLTELESPSDLYMRQGVYAGPAIQL 532
R C+YY DYP+S F++ N + +G+E+EYAWL ++++P DL+MR G Y GP I++
Sbjct: 1646 RSCSYYMDYPFSTFALENGMKKVDEGKEDEYAWLVQIDTPDDLHMRPGSYTGPTIRV 1702
>gi|10176982|dbj|BAB10214.1| (AB010077) contains similarity to unknown
protein~emb|CAB89322.1~gene_id:MYH19.8 [Arabidopsis thaliana]
Length = 270
Frame 2 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | | | 270
0 50 100 150 200 250
Plus Strand HSPs:
Score = 518 (182.3 bits), Expect = 9.6e-49, P = 9.6e-49
Identities = 94/172 (54%), Positives = 123/172 (71%), Frame = +2
Query: 14 YVDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESKE 193
Y+ I+ C F++CIFC P S VIPLH+HP MTVFSKLL+G++H+K+YDWV P +S +
Sbjct: 103 YLHIYACHRFSICIFCLPPSGVIPLHNHPEMTVFSKLLFGTMHIKSYDWV--P---DSPQ 157
Query: 194 PGYAQVRLAKLAVDKVLNAPCDTSVLYPKHGGNLHCFTAVTPCAMLDILTPPYREEEGRR 373
P + RLAK+ VD APCDTS+LYP GGN+HCFTA T CA+LD++ PPY + GR
Sbjct: 158 PS-SDTRLAKVKVDSDFTAPCDTSILYPADGGNMHCFTAKTACAVLDVIGPPYSDPAGRH 216
Query: 374 CTYYHDYPYSAFSVANAPICDGEEEEYAWLTELES-PSDLYMRQGVYAGPAIQ 529
CTYY DYP+S+FSV + + E+E YAWL E E P DL + +Y+GP I+
Sbjct: 217 CTYYFDYPFSSFSVDGVVVAEEEKEGYAWLKEREEKPEDLTVTALMYSGPTIK 269
>gi|11357884|pir||T49947 hypothetical protein F8M21.10 - Arabidopsis thaliana
>gi|7671481|emb|CAB89322.1| (AL353993) putative protein
[Arabidopsis thaliana]
Length = 293
Frame 2 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | | | 293
0 50 100 150 200 250
Plus Strand HSPs:
Score = 461 (162.3 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 87/172 (50%), Positives = 118/172 (68%), Frame = +2
Query: 14 YVDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESKE 193
Y+ +H+CD F++ IFC P S VIPLH+HPGMTVFSKLL+G++H+K+YDWV + +SK
Sbjct: 123 YLHLHQCDQFSIGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDWVVDAPMRDSK- 181
Query: 194 PGYAQVRLAKLAVDKVLNAPCDTSVLYPKHGGNLHCFTAVTPCAMLDILTPPYREEEGRR 373
RLAKL VD APC+ S+LYP+ GGN+H FTA+T CA+LD+L PPY EGR
Sbjct: 182 -----TRLAKLKVDSTFTAPCNASILYPEDGGNMHRFTAITACAVLDVLGPPYCNPEGRH 236
Query: 374 CTYYHDYPYSAFSVANAPICDGEEEE--YAWLTELE-SPSDLYMRQG-VYAGPAIQ 529
CTY+ ++P S + + EEE+ YAWL E + +P D G +Y GP ++
Sbjct: 237 CTYFLEFPLDKLSSEDDDVLSSEEEKEGYAWLQERDDNPEDHTNVVGALYRGPKVE 292
>gi|4512685|gb|AAD21739.1| (AC006931) hypothetical protein [Arabidopsis
thaliana]
Length = 242
Frame 2 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | | 242
0 50 100 150 200
Plus Strand HSPs:
Score = 440 (154.9 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 84/172 (48%), Positives = 110/172 (63%), Frame = +2
Query: 14 YVDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESKE 193
Y+ +HECDSF++ IFC P SS+IPLH+HPGMTV SKL+YGS+HVK+YDW+EP + E ++
Sbjct: 73 YLHLHECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSMHVKSYDWLEPQ-LTEPED 131
Query: 194 PGYAQVRLAKLAVDKVLNAPCDTSVLYPKHGGNLHCFTAVTPCAMLDILTPPYREEEGRR 373
P + R AKL D + A + LYPK GGN+HCF A+T CA+LDIL PPY E R
Sbjct: 132 PSQ-EARPAKLVKDTEMTAQSPVTTLYPKSGGNIHCFKAITHCAILDILAPPYSSEHDRH 190
Query: 374 CTYYHDYPYSAFSVANAPICDGEE-EEYAWLTELESPSDLYMRQGVYAGPAIQ 529
CTY+ + DGE + WL E + P D +R+ Y GP I+
Sbjct: 191 CTYFRKSRRE--DLPGELEVDGEVVTDVTWLEEFQPPDDFVIRRIPYRGPVIR 241
>gi|9558428|dbj|BAB03364.1| (AP002486) ESTs AU069374(C61044),D24451(R1944),
AU031820(R1944) correspond to a region of the predicted
gene.~Similar to Arabidopsis thaliana DNA chromosome 5, BAC clone
F8M21; putative protein (AL353993) [Oryza sativa]
Length = 246
Frame 2 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | | | 246
0 50 100 150 200
Plus Strand HSPs:
Score = 439 (154.5 bits), Expect = 2.3e-40, P = 2.3e-40
Identities = 85/171 (49%), Positives = 112/171 (65%), Frame = +2
Query: 14 YVDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESKE 193
Y+ ++EC++F++ IFC P VIPLH+HP MTVFSKLL+G L VK+YDW + +S +
Sbjct: 77 YLHLYECEAFSIGIFCLPPRGVIPLHNHPNMTVFSKLLFGELRVKSYDWADASQ--DSTD 134
Query: 194 PGYAQVRLAKLAVDKVLNAPCDTSVLYPKHGGNLHCFTAVTPCAMLDILTPPYREEEGRR 373
RLAK+ VD LNAPC TSVLYP+ GGNLHCFTA T CA+LD+L PPY + GR
Sbjct: 135 AQLQGARLAKVKVDGTLNAPCATSVLYPEDGGNLHCFTAHTACAVLDVLGPPYDDGSGRH 194
Query: 374 CTYYHDYPYSAFSVANAPICDGEEEEYAWLTELESPSDLYMRQGVYAGPAI 526
C +Y+ SA S ++ G++ YAWL E E P + ++ Y GP I
Sbjct: 195 CQHYN-VSSSAPSAGDSKPLPGDDG-YAWLEECEPPDNFHLVGSTYMGPRI 243
>gi|11358151|pir||T49150 hypothetical protein T20N10.20 - Arabidopsis thaliana
>gi|7630062|emb|CAB88284.1| (AL353032) putative protein
[Arabidopsis thaliana]
Length = 242
Frame 2 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | | 242
0 50 100 150 200
Plus Strand HSPs:
Score = 414 (145.7 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 79/172 (45%), Positives = 104/172 (60%), Frame = +2
Query: 14 YVDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESKE 193
Y+ +HECDSF++ IFC P S+IPLH+HPGMTV SKL+YGS+HVK+YDW EP E +
Sbjct: 73 YLQLHECDSFSIGIFCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEPDQS-ELDD 131
Query: 194 PGYAQVRLAKLAVDKVLNAPCDTSVLYPKHGGNLHCFTAVTPCAMLDILTPPYREEEGRR 373
P Q R AKL D + +P + LYP GGN+HCF A+T CA+ DIL+PPY GR
Sbjct: 132 P--LQARPAKLVKDIDMTSPSPATTLYPTTGGNIHCFKAITHCAIFDILSPPYSSTHGRH 189
Query: 374 CTYYHDYPYSAFSVANAPICDGEE-EEYAWLTELESPSDLYMRQGVYAGPAIQ 529
C Y+ P + +GE WL E + P + + + Y GP I+
Sbjct: 190 CNYFRKSPMLDLP-GEIEVMNGEVISNVTWLEEYQPPDNFVIWRVPYRGPVIR 241
>gi|7295160|gb|AAF50485.1| (AE003556) CG7550 gene product [Drosophila
melanogaster]
Length = 240
Frame 2 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | 240
0 50 100 150 200
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/129 (31%), Positives = 65/129 (50%), Frame = +2
Query: 11 AYVDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESK 190
+Y+ I E D F+M +F +S IPLHDHP M + ++G L V ++ P +
Sbjct: 61 SYMHIFEDDRFSMSLFIVRGASTIPLHDHPMMFGLLRCIWGQLMVDSFSHQLGPDEPLTY 120
Query: 191 EPGYAQVRLAKLAVDKVLN--APCDTSVLYPKHGGNLHCFTAVTP--CAMLDILTPPYRE 358
+P V++ + K++ +PC T L P+ N H + A DIL+PPY
Sbjct: 121 DPHQTVVKV-NVEEPKLVTPASPCAT--LTPRKR-NYHQIAQIGSGVAAFFDILSPPYDA 176
Query: 359 EE---G-RRCTYY 385
+ G R+C +Y
Sbjct: 177 DMPTYGPRQCRFY 189
>gi|6679797 ref|NP_032042.1| fibroblast growth factor inducible 15 [Mus
musculus] >gi|2498381|sp|Q61075|FI15_MOUSE FIBROBLAST GROWTH FACTOR
INDUCIBLE PROTEIN 15 (FIN15) >gi|1353707|gb|AAB08866.1| (U42384)
FIN15 gene product [Mus musculus]
Length = 87
Frame 1 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | | 87
0 20 40 60 80
Plus Strand HSPs:
Score = 74 (26.0 bits), Expect = 0.29, P = 0.25
Identities = 19/54 (35%), Positives = 28/54 (51%), Frame = +1
Query: 265 SFISQTRWKSALFHSSDTLCHAR--HSHTSLQRRGRKEVYILS*LSLFSI-LSC 417
SFI WK+A +++ +C H+HT LQ Y + SLFS+ +SC
Sbjct: 7 SFIIHKFWKNATYYTCSFVCVCMDIHTHTVLQNELFMYTYFRTAFSLFSVKISC 60
>gi|5817316|gb|AAD52701.1|AF091540_1 (AF091540) cysteine dioxygenase
[Schistosoma japonicum]
Length = 212
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | | 212
0 50 100 150 200
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 2.7, P = 0.93
Identities = 26/104 (25%), Positives = 43/104 (41%), Frame = +2
Query: 41 FTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESKEPGYAQVRLA 220
+ + + C+ +HDH G F KL+ G + ++W + +E Q+ L
Sbjct: 79 YNLFLLCWSEDQGTRIHDHSGAHCFVKLIKGCIKETIFEWPKY-FTVEKSNYSINQIDLP 137
Query: 221 KLAVDKVLNA-PCDTSVLYPKHG-GNLHCFTAVTPCAMLDILTPPY 352
L V V P D + ++ K G LH + L + PPY
Sbjct: 138 -LTVKSVSEMRPGDVTYMHDKIGIHRLHNPSTTETAITLHLYFPPY 182
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.368 0.163 0.557
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.325 0.142 0.467
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.368 0.161 0.641
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.366 0.162 0.623
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.353 0.151 0.528
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.358 0.159 0.580
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 189 188 10. 76 3 12 22 0.12 34
31 0.12 37
+2 0 190 189 10. 76 3 12 22 0.12 34
31 0.12 37
+1 0 190 189 10. 76 3 12 22 0.12 34
31 0.12 37
-1 0 190 189 10. 76 3 12 22 0.12 34
31 0.12 37
-2 0 190 189 10. 76 3 12 22 0.12 34
31 0.12 37
-3 0 189 189 10. 76 3 12 22 0.12 34
31 0.12 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 9
No. of states in DFA: 597 (59 KB)
Total size of DFA: 221 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 183.37u 1.06s 184.43t Elapsed: 00:00:32
Total cpu time: 183.39u 1.10s 184.49t Elapsed: 00:00:32
Start: Sat Feb 2 05:24:35 2002 End: Sat Feb 2 05:25:07 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000