BLAST Search Results
BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KSHV044
(278 letters)
Database: nr
1,508,275 sequences; 485,782,529 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18846009|ref|NP_572095.1| ORF 42; EBV BBRF2 homolog [Human he... 570 e-162
gi|7330032|gb|AAF60021.1|AF210726_42 ORF42 [Macaca mulatta rhadi... 235 5e-61
gi|18653849|ref|NP_570783.1| unknown [Macaca mulatta rhadinoviru... 234 9e-61
gi|30348545|emb|CAC84337.1| hypothetical protein [Saimiriine her... 192 5e-48
gi|9625998|ref|NP_040244.1| ORF 42~sim. to other HV [Saimiriine ... 191 9e-48
gi|9628045|ref|NP_042639.1| ORF 42 [Equine herpesvirus 2] >gnl|B... 189 6e-47
gi|9631234|ref|NP_048015.1| orf 42 [Ateline herpesvirus 3] >gnl|... 187 2e-46
gi|13095619|ref|NP_076534.1| unknown [Bovine herpesvirus 4] >gnl... 177 2e-43
gi|27452879|gb|AAO12383.1| unknown [Porcine lymphotropic herpesv... 155 9e-37
gi|9629610|ref|NP_044879.1| unknown [murid herpesvirus 4] >gnl|B... 154 1e-36
gi|27452840|gb|AAO12345.1| unknown [Porcine lymphotropic herpesv... 152 6e-36
gi|20453829|gb|AAM22141.1|AF478169_34 unknown [porcine lymphotro... 150 2e-35
gi|18025502|gb|AAK95446.1| BBRF2 [cercopithicine herpesvirus 15] 144 2e-33
gi|628149|pir||S33027 hypothetical protein - human herpesvirus 4 142 5e-33
gi|24943124|ref|NP_733886.1| ORF33 [Callitrichine herpesvirus 3]... 142 5e-33
gi|9625630|ref|NP_039881.1| hypothetical protein [Human herpesvi... 142 5e-33
gi|10140963|ref|NP_065540.1| ORF42 [Alcelaphine herpesvirus 1] >... 136 3e-31
gi|9629276|ref|NP_044476.1| UL7 [Human herpesvirus 2] >gnl|BL_OR... 46 6e-04
>gi|18846009|ref|NP_572095.1| ORF 42; EBV BBRF2 homolog [Human
herpesvirus 8]
gi|1718295|gb|AAC57124.1| ORF 42; EBV BBRF2 homolog [Human
herpesvirus 8]
gi|2246528|gb|AAB62653.1| ORF 42, herpesvirus saimiri ORF 42
homolog, conserved in other herpesviruses [Human
herpesvirus 8]
Length = 278
Score = 570 bits (1470), Expect = e-162
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MSLERALARLTGVPMSTHAPKTRESEEACPVYPHPVVPRLVLEVHRKNNALVGSNTPKMS 60
MSLERALARLTGVPMSTHAPKTRESEEACPVYPHPVVPRLVLEVHRKNNALVGSNTPKMS
Sbjct: 1 MSLERALARLTGVPMSTHAPKTRESEEACPVYPHPVVPRLVLEVHRKNNALVGSNTPKMS 60
Query: 61 VMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEHEDMVTHIDLHPHVFQERVCLLRPTSP 120
VMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEHEDMVTHIDLHPHVFQERVCLLRPTSP
Sbjct: 61 VMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEHEDMVTHIDLHPHVFQERVCLLRPTSP 120
Query: 121 GITELCCLLSMLENCRDMSPTFLRSIICRARKTHERTPGMDAAFVMHGIETLTATAAFVY 180
GITELCCLLSMLENCRDMSPTFLRSIICRARKTHERTPGMDAAFVMHGIETLTATAAFVY
Sbjct: 121 GITELCCLLSMLENCRDMSPTFLRSIICRARKTHERTPGMDAAFVMHGIETLTATAAFVY 180
Query: 181 ELSVDDHFRATPLVMFKLHKAIGDASTPMGGLMKPIYLESFKLESSGENEDDKQTCADPV 240
ELSVDDHFRATPLVMFKLHKAIGDASTPMGGLMKPIYLESFKLESSGENEDDKQTCADPV
Sbjct: 181 ELSVDDHFRATPLVMFKLHKAIGDASTPMGGLMKPIYLESFKLESSGENEDDKQTCADPV 240
Query: 241 NIFYCDTIFTKHLENNEVLKYLKMCTLFKPPIVSLFSK 278
NIFYCDTIFTKHLENNEVLKYLKMCTLFKPPIVSLFSK
Sbjct: 241 NIFYCDTIFTKHLENNEVLKYLKMCTLFKPPIVSLFSK 278
>gi|7330032|gb|AAF60021.1|AF210726_42 ORF42 [Macaca mulatta
rhadinovirus 26-95]
Length = 272
Score = 235 bits (600), Expect = 5e-61
Identities = 125/275 (45%), Positives = 174/275 (62%), Gaps = 4/275 (1%)
Query: 3 LERALARLTGVPMSTHAPKTRESEEACPVYPHPVVPRLVLEVHRKNNALVGSNTPKMSVM 62
+++ L RL G + A + Y +PV+PRL+LEVH+KN+ + SNTPK+ V
Sbjct: 1 MDQILKRLMGEQHRSEAVMPETECSSRGPYNYPVLPRLMLEVHKKNSICMASNTPKLCVR 60
Query: 63 GHLDIACLREHVKSRLSSPNFVGFTVVCLVEHEDMVTHIDLHPHVFQERVCLLRPTSPGI 122
G L++ L HV++RL S F GF C+VEHEDM+ +D++PHVF +RV L +P S +
Sbjct: 61 GRLNVPDLGVHVRTRLQSATFTGFVFACVVEHEDMIDALDIYPHVFSDRVQLFKPASASV 120
Query: 123 TELCCLLSMLENCRDMSPTFLRSIICRARKTHERTPGMDAAFVMHGIETLTATAAFVYEL 182
TELCC+LSMLEN +F+ S + RAR HER D+AFV++GIE + +T A +EL
Sbjct: 121 TELCCILSMLENYDKPPLSFILSALDRARYLHERYTCNDSAFVLYGIEVIASTLAAYHEL 180
Query: 183 SVDDH-FRATPLVMFKLHKAIGDASTPMGGLMKPIYLESFKLESSGENEDDKQTCADPVN 241
+ R PLV FKLHK + + + M GL+KPIYLESF+L EN +++ A+ N
Sbjct: 181 NPPQGILRVPPLVRFKLHKLLDENADDMKGLLKPIYLESFRLT---ENVGEEEGHAETFN 237
Query: 242 IFYCDTIFTKHLENNEVLKYLKMCTLFKPPIVSLF 276
IFYC TIFT+HL N VLKY ++ +L P +LF
Sbjct: 238 IFYCGTIFTRHLHNASVLKYFQITSLHSIPRQTLF 272
>gi|18653849|ref|NP_570783.1| unknown [Macaca mulatta rhadinovirus]
gi|4494947|gb|AAD21369.1| unknown [Macaca mulatta rhadinovirus
17577]
Length = 272
Score = 234 bits (598), Expect = 9e-61
Identities = 125/275 (45%), Positives = 173/275 (62%), Gaps = 4/275 (1%)
Query: 3 LERALARLTGVPMSTHAPKTRESEEACPVYPHPVVPRLVLEVHRKNNALVGSNTPKMSVM 62
+++ L RL G + A + Y +PV PRL+LEVH+KN+ + SNTPK+ V
Sbjct: 1 MDQILKRLMGEQHRSEAVMPETECSSRGPYNYPVFPRLMLEVHKKNSICMASNTPKLCVR 60
Query: 63 GHLDIACLREHVKSRLSSPNFVGFTVVCLVEHEDMVTHIDLHPHVFQERVCLLRPTSPGI 122
G L++ L HV++RL S F GF C+VEHEDM+ +D++PHVF +RV L +P S +
Sbjct: 61 GRLNVPDLGVHVRTRLQSATFTGFVFACVVEHEDMIDALDIYPHVFSDRVQLFKPASASV 120
Query: 123 TELCCLLSMLENCRDMSPTFLRSIICRARKTHERTPGMDAAFVMHGIETLTATAAFVYEL 182
TELCC+LSMLEN +F+ S + RAR HER D+AFV++GIE + +T A +EL
Sbjct: 121 TELCCILSMLENYDKPPLSFILSALDRARYLHERYTCNDSAFVLYGIEVIASTLAAYHEL 180
Query: 183 SVDDH-FRATPLVMFKLHKAIGDASTPMGGLMKPIYLESFKLESSGENEDDKQTCADPVN 241
+ R PLV FKLHK + + + M GL+KPIYLESF+L EN +++ A+ N
Sbjct: 181 NPPQGILRVPPLVRFKLHKLLDENADDMKGLLKPIYLESFRLT---ENVGEEEGHAETFN 237
Query: 242 IFYCDTIFTKHLENNEVLKYLKMCTLFKPPIVSLF 276
IFYC TIFT+HL N VLKY ++ +L P +LF
Sbjct: 238 IFYCGTIFTRHLHNASVLKYFQITSLHSIPRQTLF 272
>gi|30348545|emb|CAC84337.1| hypothetical protein [Saimiriine
herpesvirus 2]
Length = 265
Score = 192 bits (488), Expect = 5e-48
Identities = 101/239 (42%), Positives = 151/239 (62%), Gaps = 5/239 (2%)
Query: 35 PVVPRLVLEVHRKNNALVGSNTPKMSVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEH 94
P+VPRLVLEV++ N + +NTP V G L + L+ H+KSR+ S FVGF + C VE+
Sbjct: 22 PIVPRLVLEVNKNKNVCIAANTPCFVVDGVLMVEQLKTHIKSRMFSNKFVGFVMACFVEN 81
Query: 95 EDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKTH 154
EDMV I++ PHVF R+ + P + + E+C LLSMLEN S + L +I+ RA
Sbjct: 82 EDMVDSINMFPHVFSSRLFIYNPCNHILLEMCGLLSMLENLNTPSASLLSAIVERAYYLW 141
Query: 155 ERTPGMDAAFVMHGIETLTATAAFVYELSVDDHFRATPLVMFKLHKAIGDASTPMGGLMK 214
++ DA F++HGI+T+ +T+++ Y ++ +PL+MFKL+K I D GL+K
Sbjct: 142 TKSRCPDATFLLHGIKTIASTSSYFYGINAPVESIVSPLLMFKLYKCIEDGDPVSKGLLK 201
Query: 215 PIYLESFKLES--SGENEDDKQTCADPVNIFYCDTIFTKHLENNEVLKYLK-MCTLFKP 270
PIYL S+K+++ ++D + C N+FYC+T+FTKHL++ EVLK K +CT P
Sbjct: 202 PIYLTSWKMDTQYDAPSKDLSEKCV--FNLFYCNTVFTKHLQHKEVLKLFKCVCTTSTP 258
>gi|9625998|ref|NP_040244.1| ORF 42~sim. to other HV [Saimiriine
herpesvirus 2]
gi|267199|sp|Q01028|UL07_HSVSA GENE 42 PROTEIN
gi|76675|pir||D36810 hypothetical protein ORF42 - saimiriine
herpesvirus 1 (strain 11)
gi|60363|emb|CAA45665.1| unnamed protein product [Saimiriine
herpesvirus 2]
Length = 265
Score = 191 bits (486), Expect = 9e-48
Identities = 101/239 (42%), Positives = 151/239 (62%), Gaps = 5/239 (2%)
Query: 35 PVVPRLVLEVHRKNNALVGSNTPKMSVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEH 94
P+VPRLVLEV++ N + +NTP V G L + L+ H+KSR+ S FVGF + C VE+
Sbjct: 22 PIVPRLVLEVNKNKNVCIAANTPCFVVDGVLMVEQLKTHIKSRMFSNKFVGFVMACFVEN 81
Query: 95 EDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKTH 154
EDMV I++ PHVF R+ + P + + E+C LLSML+N S + L +I+ RA
Sbjct: 82 EDMVDSINMFPHVFSSRLFIYNPCNHILLEMCGLLSMLKNLNTPSSSLLSAIVERAYYLW 141
Query: 155 ERTPGMDAAFVMHGIETLTATAAFVYELSVDDHFRATPLVMFKLHKAIGDASTPMGGLMK 214
++ DA F++HGI+TL +T+++ Y ++ +PL+MFKL+K I D GL+K
Sbjct: 142 TKSRCPDATFLLHGIKTLASTSSYFYGINAPVESIVSPLLMFKLYKCIEDGDPVSKGLLK 201
Query: 215 PIYLESFKLES--SGENEDDKQTCADPVNIFYCDTIFTKHLENNEVLKYLK-MCTLFKP 270
PIYL S+K+++ ++D + C N+FYC+T+FTKHL++ EVLK K +CT P
Sbjct: 202 PIYLTSWKMDTQYDAPSKDLSEKCV--FNLFYCNTVFTKHLQHKEVLKLFKCVCTTSTP 258
>gi|9628045|ref|NP_042639.1| ORF 42 [Equine herpesvirus 2]
gi|1360798|pir||S55637 hypothetical protein 42 - equine herpesvirus
2
gi|695215|gb|AAC13830.1| ORF 42
Length = 276
Score = 189 bits (479), Expect = 6e-47
Identities = 107/264 (40%), Positives = 158/264 (59%), Gaps = 12/264 (4%)
Query: 7 LARLTGVPMSTH--APKTRESEEACPVYPHPVVPRLVLEVHRKNNALVGSNTPKMSVMGH 64
L TGVP + APKT P+YP+P+V R+VLEV+R N V N+P + G
Sbjct: 4 LKLFTGVPKKEYPTAPKT-----VTPLYPNPMVCRMVLEVNRCENLCVACNSPVLVRDGA 58
Query: 65 LDIACLREHVKSRLSSPNFVGFTVVCLVEHEDMVTHIDLHPHVFQERVCLLRPTSPGITE 124
L ++ ++VK +L S F+GFT+ CL++ ED+V I+L PHVF +RV + RP + + E
Sbjct: 59 LCVSQTLDYVKQKLVSDTFMGFTMACLLDCEDLVDSINLAPHVFAQRVFVFRPPNSYLLE 118
Query: 125 LCCLLSMLENCRDMSPTFLRSIICRARKTHERTPGMDAAFVMHGIETLTATAAFVYELSV 184
+C L SMLENC + F+ S++ RAR + ++P +DA F++H IE + +T ++L +
Sbjct: 119 MCVLSSMLENCETYTRRFVESLVSRARFIYSKSPCIDACFLLHSIEMMASTIIDYFKLDL 178
Query: 185 DDHFRATP-LVMFKLHKAIGDASTPMGGLMKPIYLESFKL----ESSGENEDDKQTCADP 239
+ P L+M+KLH AI S GL++PIY ESFKL ++S + E++
Sbjct: 179 EGTQPRYPGLMMYKLHGAIEGGSFESKGLLRPIYHESFKLCSDPDASFDEEEETGEAGVT 238
Query: 240 VNIFYCDTIFTKHLENNEVLKYLK 263
N+FYC+TIFTKHL V K K
Sbjct: 239 FNVFYCETIFTKHLRAEAVAKVFK 262
>gi|9631234|ref|NP_048015.1| orf 42 [Ateline herpesvirus 3]
gi|11279126|pir||T42957 hypothetical protein 42 - ateline
herpesvirus 3 (strain 73)
gi|4019270|gb|AAC95568.1| orf 42 [Ateline herpesvirus 3]
Length = 265
Score = 187 bits (475), Expect = 2e-46
Identities = 102/246 (41%), Positives = 150/246 (60%), Gaps = 2/246 (0%)
Query: 34 HPVVPRLVLEVHRKNNALVGSNTPKMSVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVE 93
H VPRLVLEV++ + + +NTP V G L LR H++SR+ S F GF + C VE
Sbjct: 21 HVTVPRLVLEVNKSESVCIAANTPCFVVDGVLMADQLRAHIRSRMLSNKFAGFIMACFVE 80
Query: 94 HEDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKT 153
+EDMV ++L PHVF R+ + P + + E+C LLSMLEN S + L +I+ RA
Sbjct: 81 NEDMVESLNLFPHVFSSRLFIYNPCNHILLEMCGLLSMLENIAAPSASSLSAIVERAEYL 140
Query: 154 HERTPGMDAAFVMHGIETLTATAAFVYELSVDDHFRATPLVMFKLHKAIGDASTPMGGLM 213
+ DAAF++HGI+TL +T+++ Y ++ +PL+MFKL+K I + GL+
Sbjct: 141 WTKNKCPDAAFLLHGIKTLASTSSYFYNINSPVESLVSPLLMFKLYKCIEEGDPVSKGLL 200
Query: 214 KPIYLESFKLESSGENEDDKQTCADPV-NIFYCDTIFTKHLENNEVLKYLKMCTLFKPPI 272
KPIYL S+K+++ E +K C V N+FYC+T+FTKHL+N EVLK K + I
Sbjct: 201 KPIYLTSWKMDTHYE-ASNKDICGGCVFNLFYCNTVFTKHLQNKEVLKLFKCACVTYNHI 259
Query: 273 VSLFSK 278
++ S+
Sbjct: 260 TNIVSQ 265
>gi|13095619|ref|NP_076534.1| unknown [Bovine herpesvirus 4]
gi|12802569|gb|AAK07961.1|AF318573_41 unknown [Bovine herpesvirus
4]
Length = 291
Score = 177 bits (448), Expect = 2e-43
Identities = 104/275 (37%), Positives = 160/275 (57%), Gaps = 12/275 (4%)
Query: 11 TGVPMSTHAPKTRESEEACP-VYPHPVVPRLVLEVHRKNNALVGSNTPKMSVMGHLDIAC 69
T + + + P T + A P +Y P++PR++LEV+ K+N V +NTP V L
Sbjct: 22 TFIKTTVNHPSTMKDIPATPKLYQQPILPRMILEVNTKDNVYVAANTPSFIVNDKLREED 81
Query: 70 LREHVKSRLSSPNFVGFTVVCLVEHEDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLL 129
L HV +R SS NF+GF + C+VE EDMV ++ + PHVF+ RV + +P S + ELC +L
Sbjct: 82 LVSHVMTRASSANFLGFIMACVVECEDMVINLHIFPHVFKNRVFIYKPKSILLLELCSIL 141
Query: 130 SMLENCRDMSPTFLRSIICRARKTHER-TPGMDAAFVMHGIETLTATAAFVYELSVDD-H 187
SM+EN + + L +++ RA + MDA F+M+GIETL AT+ + L+ DD
Sbjct: 142 SMIENLENPTGRGLDAVLRRAHCIFSKCKESMDARFLMNGIETLIATSLAYHNLNTDDCE 201
Query: 188 FRATPLVMFKLHKAIGDASTPMGGLMKPIYLESFKLE----SSGENEDDKQTCADPVNIF 243
R +PLV ++L + + D++ GL+K I+ S K+E S + + DK+ NIF
Sbjct: 202 PRVSPLVAYRLFRCLEDSNGESRGLLKSIFFNSHKMETPDVSPNKGDGDKRV----FNIF 257
Query: 244 YCDTIFTKHLENNEVLKYLKMCTLFKPPIVSLFSK 278
YCDTIFT+HL V+++ K C F +++ K
Sbjct: 258 YCDTIFTRHLRVPNVVRFFK-CACFHSTVLTQILK 291
>gi|27452879|gb|AAO12383.1| unknown [Porcine lymphotropic
herpesvirus 2]
Length = 266
Score = 155 bits (391), Expect = 9e-37
Identities = 93/251 (37%), Positives = 138/251 (54%), Gaps = 6/251 (2%)
Query: 31 VYPHPVVPRLVLEVHRKNNALVGSNTPK-MSVMGHLDIACLREHVKSRLSSPNFVGFTVV 89
VY +PV+PRLVLEV + N V SN+P + G+L+I L HVK+RL+SP+FVGFT+
Sbjct: 19 VYQYPVIPRLVLEVSKNQNICVASNSPTFVDSNGNLNIKDLDSHVKARLNSPHFVGFTIC 78
Query: 90 CLVEHEDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICR 149
+V ED V +D+ HV +ER + +P + + ELC +LS +EN S + + R
Sbjct: 79 SIVTCEDKVFTLDMFQHVLKERCIIYKPDNFYLAELCTMLSAIENMVKPSLKLILQYLRR 138
Query: 150 ARKTHERTPGMDAAFVMHGIETLTATAAFVYELSVD--DHFRATPLVMFKLHKAIGDAST 207
AR H R P DAA+++HGIE L +T Y + D +H+ A L F ++KAI
Sbjct: 139 ARFIHTRCPYRDAAYLLHGIEVLLSTMVDFYGFNKDKTEHW-APSLNSFNIYKAIQSFEP 197
Query: 208 PMGGLMKPIYLESFKLESSGENEDDKQTCADPVNIFYCDTIFTKHLENNEVLKYLKMCTL 267
L+ ++ S KLE + E+ + A N+FY T T H N +LK +K+ +
Sbjct: 198 TCKDLISAMFCSSHKLEEAYSQEEPNK--AKVFNLFYSPTFLTHHYSNKNILKNIKLICI 255
Query: 268 FKPPIVSLFSK 278
+ + SK
Sbjct: 256 QDAVVYRILSK 266
>gi|9629610|ref|NP_044879.1| unknown [murid herpesvirus 4]
gi|2317980|gb|AAB66438.1| unknown [murid herpesvirus 4]
gi|6625605|gb|AAF19306.1|AF105037_38 42 [murid herpesvirus 4]
Length = 253
Score = 154 bits (390), Expect = 1e-36
Identities = 87/234 (37%), Positives = 127/234 (54%), Gaps = 5/234 (2%)
Query: 36 VVPRLVLEVHRKNNALVGSNTPKMSVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEHE 95
++PRL+LE+ V S+TP + LD+ L H+K++LS F GF L E E
Sbjct: 13 ILPRLMLEITSNGTLTVASHTPIFQKLSLLDLPSLTAHLKTKLSGSMFKGFLFATLCETE 72
Query: 96 DMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKTHE 155
D VT +D+HPHVF++R+ L P + ELC L+SM+EN D P SI R ++ +
Sbjct: 73 DHVTTLDMHPHVFEKRLVLYNPRNTCNKELCALISMVENLMDCDPKLPLSIYMRGKRLFQ 132
Query: 156 RTPGMDAAFVMHGIETLTATAAFVY--ELSVDDHFRATPLVMFKLHKAIGDASTPMGGLM 213
+ PG D+ F+ G+ TL +T VY +V+D PL+ +K+H I GL+
Sbjct: 133 KNPGKDSCFLFKGLSTLISTHFAVYHPNFTVNDELLLPPLLAYKMHSTIEGIDEVSKGLL 192
Query: 214 KPIYLESFKLESSGENEDDKQTCADPVNIFYCDTIFTKHLENNEVLKYLKMCTL 267
K IYL+S+++++ N DD Q A + TIFTKHL VL +K L
Sbjct: 193 KAIYLDSYRMDN---NIDDFQNPAGTFTLLCLPTIFTKHLTVPNVLILIKRAGL 243
>gi|27452840|gb|AAO12345.1| unknown [Porcine lymphotropic
herpesvirus 3]
Length = 267
Score = 152 bits (384), Expect = 6e-36
Identities = 91/250 (36%), Positives = 134/250 (53%), Gaps = 3/250 (1%)
Query: 31 VYPHPVVPRLVLEVHRKNNALVGSNTPK-MSVMGHLDIACLREHVKSRLSSPNFVGFTVV 89
VY +P++PRLVLEV R N V SN+P + G+L+I L HVK+RL+SP+FVGFT+
Sbjct: 19 VYQYPIIPRLVLEVSRNQNICVASNSPVFVDSNGNLNIKDLDGHVKARLNSPHFVGFTIC 78
Query: 90 CLVEHEDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICR 149
++ ED V +D+ HV +ER L +P + + ELC LLS +EN S + + R
Sbjct: 79 SILTCEDKVLTLDIFQHVLKERCFLYKPDNFYLAELCILLSAIENMVTPSLKLILQCLRR 138
Query: 150 ARKTHERTPGMDAAFVMHGIETLTATAAFVYELSVDD-HFRATPLVMFKLHKAIGDASTP 208
AR H R +DA F++HGIE L +T Y D+ A L F ++KA+
Sbjct: 139 ARFIHTRCSSVDATFLLHGIEVLLSTMIDFYSFEKDETEHWAKGLDNFNIYKAVQSFDPT 198
Query: 209 MGGLMKPIYLESFKLESSGENEDDKQTCADPVNIFYCDTIFTKHLENNEVLKYLKMCTLF 268
L+ ++ S +LE + QT N+FYC T T H N ++K++K+ +
Sbjct: 199 CKDLISAMFCSSHRLEEETGAPKEPQT-KQIFNLFYCPTFLTHHYSNKYIIKFIKLICIG 257
Query: 269 KPPIVSLFSK 278
+FSK
Sbjct: 258 DIVKFRIFSK 267
>gi|20453829|gb|AAM22141.1|AF478169_34 unknown [porcine lymphotropic
herpesvirus 1]
Length = 266
Score = 150 bits (380), Expect = 2e-35
Identities = 92/251 (36%), Positives = 137/251 (53%), Gaps = 6/251 (2%)
Query: 31 VYPHPVVPRLVLEVHRKNNALVGSNTPKMSVM-GHLDIACLREHVKSRLSSPNFVGFTVV 89
VY +P++PRLVLEV + N V SN+P + G+L+I L HVK+RL+SP+FVGFT+
Sbjct: 19 VYQYPIIPRLVLEVSKNQNICVASNSPTFADSNGNLNIKDLDGHVKARLNSPHFVGFTIC 78
Query: 90 CLVEHEDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICR 149
++ ED V +D+ HV +ER L +P + + ELC +LS +EN S + + R
Sbjct: 79 SILTCEDKVFTLDMFQHVLKERCILYKPDNFYMAELCTILSAIENMVKPSLNLILQYLRR 138
Query: 150 ARKTHERTPGMDAAFVMHGIETLTATAAFVYELSVD--DHFRATPLVMFKLHKAIGDAST 207
AR H R P DAA+++HGIE L +T Y D +H+ A L FK++KAI
Sbjct: 139 ARFIHTRCPYKDAAYLLHGIEVLLSTMVDFYGFDKDKTEHW-AVSLDNFKIYKAIQLFEP 197
Query: 208 PMGGLMKPIYLESFKLESSGENEDDKQTCADPVNIFYCDTIFTKHLENNEVLKYLKMCTL 267
L+ ++ S KLE + E+ A N+FY T T H N +LK +K+ +
Sbjct: 198 TCKDLISAMFCSSHKLEEAYSQEEPDG--AKVFNLFYSPTFLTHHYSNKHILKNIKLICI 255
Query: 268 FKPPIVSLFSK 278
+ + S+
Sbjct: 256 HSAVMYRILSE 266
>gi|18025502|gb|AAK95446.1| BBRF2 [cercopithicine herpesvirus 15]
Length = 278
Score = 144 bits (362), Expect = 2e-33
Identities = 86/243 (35%), Positives = 132/243 (53%), Gaps = 17/243 (6%)
Query: 36 VVPRLVLEVHRKNNALVGSNTPKM-SVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEH 94
V PRLVLEV+R N V +N P+ + G L+I LR HVK+R+ S F G+ +V L++
Sbjct: 24 VTPRLVLEVNRHNTICVATNVPEFYNARGDLNIRDLRSHVKARMISSQFCGYVLVSLLDS 83
Query: 95 EDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKTH 154
ED V H+++ PHVF ER+ L +P++ + E+C LLSM+EN R S R ++ R H
Sbjct: 84 EDQVDHLNIFPHVFSERMVLYKPSNVNLMEMCALLSMIENARSPSLDLCREVLGRLTLLH 143
Query: 155 ERTPGMDAAFVMHGIETLTATAAFVYEL---SVDDHFRATPLVMFKLHKAIGDASTPMGG 211
+ +D+ F+ +G TL +T ++L + D L +FKLHK + A +
Sbjct: 144 SKCNNLDSLFLYNGARTLLSTLVKYHDLEEGAADPGPWNEGLSLFKLHKELRRAPSEARD 203
Query: 212 LMKPIYLESFKLESSGENEDDKQTCAD-----------PVNIFYCDTIFTKHLENNEVLK 260
LM+ ++L S K+ + K CAD N+FY D++ TKH + VL+
Sbjct: 204 LMQSLFLTSGKMGRLASS--PKDYCADMNKEEDGASRFTFNLFYQDSLLTKHFQCQTVLQ 261
Query: 261 YLK 263
L+
Sbjct: 262 TLR 264
>gi|628149|pir||S33027 hypothetical protein - human herpesvirus 4
Length = 313
Score = 142 bits (359), Expect = 5e-33
Identities = 87/246 (35%), Positives = 133/246 (53%), Gaps = 23/246 (9%)
Query: 36 VVPRLVLEVHRKNNALVGSNTPKM-SVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEH 94
V PRLVLEV+R N V +N P+ + G L+I LR HVK+R+ S F G+ +V L++
Sbjct: 59 VTPRLVLEVNRHNAICVATNVPEFYNARGDLNIRDLRAHVKARMISSQFCGYVLVSLLDS 118
Query: 95 EDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKTH 154
ED V H+++ PHVF ER+ L +P + + E+C LLSM+EN + S R ++ R H
Sbjct: 119 EDQVDHLNIFPHVFSERMILYKPNNVNLMEMCALLSMIENAKSPSIGLCREVLGRLTLLH 178
Query: 155 ERTPGMDAAFVMHGIETLTATAAFVYELSVDDHFRATP------LVMFKLHKAIGDASTP 208
+ +D+ F+ +G TL +T ++L + ATP L +FKLHK + A +
Sbjct: 179 SKCNNLDSLFLYNGARTLLSTLVKYHDL---EEGAATPGPWNEGLSLFKLHKELKRAPSE 235
Query: 209 MGGLMKPIYLESFKLESSGENEDDKQTCAD-----------PVNIFYCDTIFTKHLENNE 257
LM+ ++L S K+ + K CAD N+FY D++ TKH +
Sbjct: 236 ARDLMQSLFLTSGKMGCLARS--PKDYCADLNKEEDANSGFTFNLFYQDSLLTKHFQCQT 293
Query: 258 VLKYLK 263
VL+ L+
Sbjct: 294 VLQTLR 299
>gi|24943124|ref|NP_733886.1| ORF33 [Callitrichine herpesvirus 3]
gi|13676675|gb|AAK38241.1|AF319782_35 ORF33 [callitrichine
herpesvirus 3]
Length = 280
Score = 142 bits (359), Expect = 5e-33
Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 14/254 (5%)
Query: 36 VVPRLVLEVHRKNNALVGSNTPKM-SVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEH 94
+ PRL++EV R N V SN P G L+I LR HVK+R S F G+ +++
Sbjct: 29 ITPRLMVEVSRHNGICVASNVPDFYDRSGLLNIQDLRAHVKARQISKQFCGYAFASILDS 88
Query: 95 EDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKTH 154
ED V H+++ PH+F ER+ L +P + + E+C L+S++EN R SI R H
Sbjct: 89 EDQVEHLNIFPHIFFERMVLYKPDNLNLLEMCALISIVENLRQPCVELCMSIRARLATLH 148
Query: 155 ERTPGMDAAFVMHGIETLTATAAFVYELS-VDDHFRATPLVMFKLHKAIGDASTPMGGLM 213
+T D+ F+ G +TL +T YEL+ DD L MF+LHK + A L+
Sbjct: 149 AKTLNKDSLFLYIGGKTLLSTIVHYYELAHKDDPTWDQGLTMFRLHKELAKAPCEARDLL 208
Query: 214 KPIYLESFKLE----------SSGENEDDKQTCADPVNIFYCDTIFTKHLENNEVLKYLK 263
+ +YL S K+ S+ ED + C N+F+ D+I TKH + EVLK L+
Sbjct: 209 QSVYLTSTKMGRHTTSAKEYCSNMNKEDTESECT--FNLFHQDSILTKHFQCQEVLKTLR 266
Query: 264 MCTLFKPPIVSLFS 277
L+ P+ ++ +
Sbjct: 267 SKCLYSKPVFTIIN 280
>gi|9625630|ref|NP_039881.1| hypothetical protein [Human herpesvirus
4]
gi|267198|sp|P29882|UL07_EBV BBRF2 PROTEIN
gi|1632797|emb|CAA24822.1| BBRF2 late reading frame, homologous to
RF 53 VZV [Human herpesvirus 4]
gi|23893629|emb|CAD53433.1| BBRF2 protein [Human herpesvirus 4]
Length = 278
Score = 142 bits (359), Expect = 5e-33
Identities = 87/246 (35%), Positives = 133/246 (53%), Gaps = 23/246 (9%)
Query: 36 VVPRLVLEVHRKNNALVGSNTPKM-SVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEH 94
V PRLVLEV+R N V +N P+ + G L+I LR HVK+R+ S F G+ +V L++
Sbjct: 24 VTPRLVLEVNRHNAICVATNVPEFYNARGDLNIRDLRAHVKARMISSQFCGYVLVSLLDS 83
Query: 95 EDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKTH 154
ED V H+++ PHVF ER+ L +P + + E+C LLSM+EN + S R ++ R H
Sbjct: 84 EDQVDHLNIFPHVFSERMILYKPNNVNLMEMCALLSMIENAKSPSIGLCREVLGRLTLLH 143
Query: 155 ERTPGMDAAFVMHGIETLTATAAFVYELSVDDHFRATP------LVMFKLHKAIGDASTP 208
+ +D+ F+ +G TL +T ++L + ATP L +FKLHK + A +
Sbjct: 144 SKCNNLDSLFLYNGARTLLSTLVKYHDL---EEGAATPGPWNEGLSLFKLHKELKRAPSE 200
Query: 209 MGGLMKPIYLESFKLESSGENEDDKQTCAD-----------PVNIFYCDTIFTKHLENNE 257
LM+ ++L S K+ + K CAD N+FY D++ TKH +
Sbjct: 201 ARDLMQSLFLTSGKMGCLARS--PKDYCADLNKEEDANSGFTFNLFYQDSLLTKHFQCQT 258
Query: 258 VLKYLK 263
VL+ L+
Sbjct: 259 VLQTLR 264
>gi|10140963|ref|NP_065540.1| ORF42 [Alcelaphine herpesvirus 1]
gi|7447067|pir||T03136 hypothetical protein 42 - alcelaphine
herpesvirus 1
gi|2338004|gb|AAC58088.1| ORF42 [Alcelaphine herpesvirus 1]
Length = 257
Score = 136 bits (343), Expect = 3e-31
Identities = 82/242 (33%), Positives = 133/242 (54%), Gaps = 4/242 (1%)
Query: 36 VVPRLVLEVHRKNNALVGSNTPK-MSVMGHLDIACLREHVKSRLSSPNFVGFTVVCLVEH 94
++PRLVLEV + + V N+P ++ G+L++ L H K+RL S +F GF + +V
Sbjct: 17 LLPRLVLEVSKNDKICVACNSPDFVNSNGNLNVKDLEAHAKARLHSSHFAGFVLCPIVAS 76
Query: 95 EDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENCRDMSPTFLRSIICRARKTH 154
ED V+ D++ HV QER L RP + +TE+CC++S LENC S + L + RA +
Sbjct: 77 EDKVSTFDMYYHVIQERTVLYRPQNTVLTEMCCIISALENCVVPSASLLIQYLDRANQLF 136
Query: 155 ERTPGMDAAFVMHGIETLTATAAFVYELSVDDHFR-ATPLVMFKLHKAIGDASTPMGGLM 213
R P D+ F++ G++TL +T + D + L ++L+K + LM
Sbjct: 137 NRHPSRDSLFLLGGVKTLISTLMHWHGFQHPDVSQLPRGLQSYELYKDLESFDAECKDLM 196
Query: 214 KPIYLESFKLESSGENEDDKQTCADPVNIFYCDTIFTKHLENNEVLKYLKMCTLFKPPIV 273
++ +SFKL NE+++Q A N+FY TI TKH ++ ++ +K L K ++
Sbjct: 197 LSMFCKSFKL--GDWNEENEQLEAFTFNLFYSPTILTKHFKSKIIISSIKEACLLKDCVL 254
Query: 274 SL 275
SL
Sbjct: 255 SL 256
>gi|9629276|ref|NP_044476.1| UL7 [Human herpesvirus 2]
gi|2829738|sp|P89430|UL07_HSV2H PROTEIN UL7
gi|1869829|emb|CAB06767.1| UL7 [Human herpesvirus 2]
Length = 296
Score = 46.2 bits (108), Expect = 6e-04
Identities = 25/55 (45%), Positives = 30/55 (54%)
Query: 81 PNFVGFTVVCLVEHEDMVTHIDLHPHVFQERVCLLRPTSPGITELCCLLSMLENC 135
P + GF VV L +ED V + + P V R+ L RPT EL CLL LENC
Sbjct: 97 PTYRGFAVVVLTANEDHVHSLAVPPLVLLHRLSLFRPTDLRDFELVCLLMYLENC 151
Database: nr
Posted date: Aug 27, 2003 10:37 AM
Number of letters in database: 485,782,529
Number of sequences in database: 1,508,275
Lambda K H
0.323 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 267,120,118
Number of Sequences: 1508275
Number of extensions: 10647599
Number of successful extensions: 18744
Number of sequences better than 1.0e-03: 18
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18690
Number of HSP's gapped (non-prelim): 20
length of query: 278
length of database: 485,782,529
effective HSP length: 122
effective length of query: 156
effective length of database: 301,772,979
effective search space: 47076584724
effective search space used: 47076584724
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 106 (45.4 bits)