proteins
| 104 proteins |
R | COG1266 | Predicted metal-dependent membrane protease | Help | |
|---|---|---|---|---|---|
| 3 from | query genome Listeria innocua (Bacillales | Bacilli) | ||||
| lin0997 lin2176 lin2232 | ||||
131 letters (r) 0
0 385 ||| 1 lin0055 (131) 20
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= lin0055
(131 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
lin0055 152 9e-38
CC2372 37 0.007
BS_yhgE 33 0.094
BMEII0460 32 0.15
SPAC688.11 32 0.15
SMc02150 32 0.26
HI1374 32 0.27
RSc1566 30 0.58
slr2136 30 0.65
SPAC1F5.06 30 0.69
aq_761 30 1.1
mll8436 30 1.2
CAC0258 29 1.3
YER068w 29 1.4
HI0756 29 1.6
YPO3122 29 1.6
CAC1613 29 1.7
BS_acoR 29 1.8
MJ0705 29 2.0
SMc04293 29 2.1
aq_1765 28 2.2
MA4161 28 2.3
YHR036w 28 3.0
mll5777 28 3.2
ECU06g0840 28 3.5
PM0513 28 3.7
SPy1904 28 3.9
YDR089w 28 4.2
RSc0009 28 4.3
CAC2687 28 4.4
MT2262 28 4.6
XF0368 27 4.8
YHR164c 27 5.1
aq_2107 27 5.1
MA3827 27 5.3
L173921 27 5.4
BS_dnaK 27 5.5
SSO1497 27 5.6
CAC3414 27 5.7
YOR270c 27 5.8
YMR162c 27 5.9
HI1354 27 6.5
CAC1883_1 27 7.3
APE2444 27 7.4
Cgl2745 27 7.4
SA0954 27 7.4
STM3003 27 7.4
CAC2082 27 7.9
SP1559 27 7.9
ECs3686 27 8.1
ZptsP 27 8.1
ptsP 27 8.1
RC0808 27 8.3
SPAC19B12.05c 27 8.3
SSO3130 27 8.8
Cj1116c 27 9.4
jhp0199 27 9.6
# >lin0055
# Length = 131
#
# Score = 152 bits (385), Expect = 9e-38
# Identities = 107/107 (100%), Positives = 107/107 (100%)
#
# Query: 1 MGLTDFWKTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPA 60
# MGLTDFWKTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPA
# Sbjct: 1 MGLTDFWKTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPA 60
#
# Query: 61 NPFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAI 107
# NPFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAI
# Sbjct: 61 NPFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAI 107
#
#
# >CC2372
# Length = 335
#
# Score = 37.0 bits (84), Expect = 0.007
# Identities = 17/44 (38%), Positives = 23/44 (51%)
#
# Query: 29 LKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLE 72
# L + DE +A + +L+A+ K PDMPS N V K LE
# Sbjct: 49 LSQLDEWLARITEELAAWDKANPDMPSAPFAVNQIVHKTNNRLE 92
#
#
# >BS_yhgE
# Length = 775
#
# Score = 33.1 bits (74), Expect = 0.094
# Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
#
# Query: 35 KMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDT 94
# KM E+ + L +KG P++ N + N KV E EK EK A + ++T
# Sbjct: 270 KMNELLAGLQNVQKGTPNL------TNGLDQLNSKVQEGSEKAAKAEKIINALDLTKLET 323
#
# Query: 95 AYRKYLEYKALAIKEEKAEQAKKEKEKKEREERLKN 130
# A LE A+KE K + E K R++ KN
# Sbjct: 324 AVNN-LEKSETAMKEFKKQLTDFENSLKNRDQAFKN 358
#
#
# >BMEII0460
# Length = 339
#
# Score = 32.3 bits (72), Expect = 0.15
# Identities = 15/40 (37%), Positives = 21/40 (52%)
#
# Query: 33 DEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLE 72
# DE +AE+ DL+AY P P+ N V ++ K LE
# Sbjct: 70 DEWLAEITEDLAAYNAVNPGRPAAPFAVNQIVHRSNKRLE 109
#
#
# >SPAC688.11
# Length = 1092
#
# Score = 32.3 bits (72), Expect = 0.15
# Identities = 26/106 (24%), Positives = 53/106 (49%), Gaps = 14/106 (13%)
#
# Query: 29 LKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASL 88
# L ++D ++ ++++LS G+ + +N+ ++E L+ I K+K +L
# Sbjct: 435 LNQYDARVRTLENELS----------QAGVNLQEQIHQNDDLIESLKNQILTWKNKYEAL 484
#
# Query: 89 KSAIDTAYRKYLE----YKALAIKEEKAEQAKKEKEKKEREERLKN 130
# +++L+ YK + +K A++A +KEK ERE + KN
# Sbjct: 485 AKLYTQLRQEHLDLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKN 530
#
#
# >SMc02150
# Length = 336
#
# Score = 31.6 bits (70), Expect = 0.26
# Identities = 14/41 (34%), Positives = 21/41 (51%)
#
# Query: 33 DEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQ 73
# DE +AE+ L+ + G P+ P+ N V K+ LEQ
# Sbjct: 53 DEWLAEITETLADHDAGHPERPAAPFAVNQIVHKSNARLEQ 93
#
#
# >HI1374
# Length = 1510
#
# Score = 31.6 bits (70), Expect = 0.27
# Identities = 20/83 (24%), Positives = 40/83 (48%)
#
# Query: 31 KHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKS 90
# +H EK+ + D++ + + + AN +E+++ EQ E ID + + A +
# Sbjct: 385 RHQEKITRYQEDIAELTERLEEQKMVVEDANDALEESQAQFEQTEIEIDAVRSQLADYQQ 444
#
# Query: 91 AIDTAYRKYLEYKALAIKEEKAE 113
# A+D + L+Y+ EKA+
# Sbjct: 445 ALDAQQTRALQYQQAIAALEKAK 467
#
#
# >RSc1566
# Length = 366
#
# Score = 30.4 bits (67), Expect = 0.58
# Identities = 11/30 (36%), Positives = 18/30 (59%)
#
# Query: 50 MPDMPSKGIPANPFVEKNEKVLEQLEKYID 79
# +P + +P NPF N ++L +LE Y+D
# Sbjct: 165 IPFLDWNEVPNNPFFAPNAEILPELETYMD 194
#
#
# >slr2136
# Length = 403
#
# Score = 30.4 bits (67), Expect = 0.65
# Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
#
# Query: 19 DKLHDYLKDALK--KHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEK 76
# D H+ +K AL+ KH +K+ + L ++K PD +G F E EK+ E LE
# Sbjct: 102 DVHHNGMKIALEVAKHVDKV-RINPGLYVFEK--PDAQREGYSDQEFAEIGEKIRETLEP 158
#
# Query: 77 YIDKEKDKRASLKSAID 93
# + +D+ S++ ++
# Sbjct: 159 LVISLRDQGKSMRIGVN 175
#
#
# >SPAC1F5.06
# Length = 848
#
# Score = 30.4 bits (67), Expect = 0.69
# Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
#
# Query: 8 KTPTEKKRDEYDKLHDYLK------DALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPAN 61
# ++PT + D Y KL D LK D K+ + + K+ L + + + P N
# Sbjct: 647 QSPTSEVTDRYKKLDDTLKSISFRFDQAKQFNTSLENFKNALERAESLLTNFDVPDYPLN 706
#
# Query: 62 PFVEKNEKVLEQL-----EKYIDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAK 116
# + EK+ K + L +K ++ + LK +D+ L L EE E+AK
# Sbjct: 707 VYDEKDVKRVNSLRGTSYKKLGNQYYNDTQWLKDNLDSHLSHTLSEDPLIKVEELEEKAK 766
#
# Query: 117 KEKE 120
# + +E
# Sbjct: 767 RLQE 770
#
#
# >aq_761
# Length = 617
#
# Score = 29.6 bits (65), Expect = 1.1
# Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
#
# Query: 58 IPANPFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEY-KALAIKEEKAEQAK 116
# +P +P+V++ ++ + E YI++E+ LK DT ++Y K + +E E+ K
# Sbjct: 526 VPQHPYVKEEVEIQLKYEPYIERERKLNEKLKKLEDTKIPPDIDYDKIPGLTKEAREKLK 585
#
# Query: 117 KEK 119
# K K
# Sbjct: 586 KFK 588
#
#
# >mll8436
# Length = 376
#
# Score = 29.6 bits (65), Expect = 1.2
# Identities = 11/21 (52%), Positives = 16/21 (75%)
#
# Query: 34 EKMAEVKSDLSAYKKGMPDMP 54
# +KM+E +DL+AY + MPD P
# Sbjct: 331 DKMSEALADLAAYGRLMPDGP 351
#
#
# >CAC0258
# Length = 466
#
# Score = 29.3 bits (64), Expect = 1.3
# Identities = 19/40 (47%), Positives = 26/40 (64%), Gaps = 4/40 (10%)
#
# Query: 68 EKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAI 107
# E ++E+ EK+I +E+DK +K ID YRK LE K AI
# Sbjct: 309 EDIVEKTEKFIQEEEDK---VKDKIDF-YRKRLEGKKAAI 344
#
#
# >YER068w
# Length = 587
#
# Score = 29.3 bits (64), Expect = 1.4
# Identities = 13/32 (40%), Positives = 21/32 (65%)
#
# Query: 98 KYLEYKALAIKEEKAEQAKKEKEKKEREERLK 129
# +Y+ +K E+A+ A+KEKE+K RE+ K
# Sbjct: 87 RYVTLSPEELKMERAKLARKEKERKHREKERK 118
#
#
# >HI0756
# Length = 410
#
# Score = 29.3 bits (64), Expect = 1.6
# Identities = 19/61 (31%), Positives = 36/61 (58%), Gaps = 10/61 (16%)
#
# Query: 65 EKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKEKEKKER 124
# ++++ L +L K + ++DK +LK+ +AL + ++AEQA +E+EK+ER
# Sbjct: 200 QEHQSTLNELNKNLALDQDKLNTLKA----------NEQALRQEIQRAEQAAREQEKRER 249
#
# Query: 125 E 125
# E
# Sbjct: 250 E 250
#
#
# >YPO3122
# Length = 658
#
# Score = 28.9 bits (63), Expect = 1.6
# Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
#
# Query: 40 KSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKE--KDKRASLKSAIDTAYR 97
# +S + KK P P K PAN +E+ V E+ ++ + + ++K+ + K A +
# Sbjct: 436 QSGTTTTKKNEPAAPGKARPANSALERLASVTERSQQRLAAKTTEEKKPAKKEAYRWTAK 495
#
# Query: 98 KYLEYKALAIKEEKAEQAKKEKEK 121
# E A I KA ++ E EK
# Sbjct: 496 NQPEVAAEPIATPKALRSALEHEK 519
#
#
# >CAC1613
# Length = 579
#
# Score = 28.9 bits (63), Expect = 1.7
# Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
#
# Query: 21 LHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFV---EKNEKVLEQLEKY 77
# +HDY+ +D + E LS +K + + P + E + + EKY
# Sbjct: 453 IHDYIMSLEDGYDTFVGERGVKLSGGQKQRISIARVFLKNPPILILDEATSALDNESEKY 512
#
# Query: 78 IDKEKDKRASLKSAIDTAYRKYLEYKA---LAIKEEKAEQAKKEKEKKEREERLKNG 131
# I K +K +S +++I A+R A + IK+ + KEK EE LK G
# Sbjct: 513 IQKSLEKLSSGRTSIVIAHRLSTIRNADEIIVIKD------RGIKEKGNHEELLKKG 563
#
#
# >BS_acoR
# Length = 605
#
# Score = 28.9 bits (63), Expect = 1.8
# Identities = 20/54 (37%), Positives = 27/54 (49%), Gaps = 6/54 (11%)
#
# Query: 56 KGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAIKE 109
# K NP++EK KVL+Q E D+++ S T + YLE AIKE
# Sbjct: 37 KKAEVNPYLEKGPKVLQQ------TELDQQSKKHSFFLTTAKPYLEKLLPAIKE 84
#
#
# >MJ0705
# Length = 405
#
# Score = 28.9 bits (63), Expect = 2.0
# Identities = 18/56 (32%), Positives = 27/56 (48%)
#
# Query: 36 MAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKSA 91
# MAEV+ D + +PD+P + VE ++ LE L Y D + K A + A
# Sbjct: 323 MAEVEDDGLYFSVTLPDVPIGTVGGGTRVETQKECLEMLGCYGDNKALKFAEIVGA 378
#
#
# >SMc04293
# Length = 538
#
# Score = 28.9 bits (63), Expect = 2.1
# Identities = 17/52 (32%), Positives = 24/52 (45%), Gaps = 4/52 (7%)
#
# Query: 18 YDKLHDYLKDALKKHDEKMAEVKSD----LSAYKKGMPDMPSKGIPANPFVE 65
# +++ DY + L K D EV + L + G D+P GIP FVE
# Sbjct: 216 FERFTDYWNEGLPKLDRITFEVGQEPVVALLRLQNGEIDVPGDGIPPAKFVE 267
#
#
# >aq_1765
# Length = 689
#
# Score = 28.5 bits (62), Expect = 2.2
# Identities = 25/102 (24%), Positives = 43/102 (41%), Gaps = 13/102 (12%)
#
# Query: 3 LTDFWKTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANP 62
# L + W + R++Y L L+ AL K E + + +K+ MP + G
# Sbjct: 332 LEEEWNKLYAEYREKYPDLAQTLEKALNK--EWSLDWLEKVEEFKEDMPTRKASG----- 384
#
# Query: 63 FVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKA 104
# KVL + YI A L +++T +KY +++A
# Sbjct: 385 ------KVLNVMADYIPTMIGGSADLSESVNTVLKKYGDFEA 420
#
#
# >MA4161
# Length = 774
#
# Score = 28.5 bits (62), Expect = 2.3
# Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
#
# Query: 50 MPD----MPSKGIPANPFVEKNEKVLEQLEKYID 79
# MPD M S +P P V +NE+ LE+L+ D
# Sbjct: 322 MPDSVYVMTSANLPGRPMVVENEEALEKLKGISD 355
#
#
# >YHR036w
# Length = 471
#
# Score = 28.1 bits (61), Expect = 3.0
# Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 19/120 (15%)
#
# Query: 21 LHDYLKDALKKHDEKMAEVKSDLSAYKKG-----------MPDMPSKGIPANPFVEKNEK 69
# + D ++ DE++ + SDLS K+G MP PS P
# Sbjct: 9 IRDSFTSGMEHVDEELGGL-SDLSISKQGPTLSPQLINRFMPHFPSSPSPL-------RN 60
#
# Query: 70 VLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKEKEKKEREERLK 129
# L+ D+E+D R + DT++ + + + E E A E+ + EER K
# Sbjct: 61 TLDFSAAKADEEEDDRMEIDEVDDTSFEEEYNNEPIETHTEATENAVVEEIEATPEERQK 120
#
#
# >mll5777
# Length = 460
#
# Score = 28.1 bits (61), Expect = 3.2
# Identities = 12/33 (36%), Positives = 20/33 (60%)
#
# Query: 8 KTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVK 40
# + P K++DE+DKL + L + + +AEVK
# Sbjct: 204 RLPVHKRQDEFDKLSVIVNTMLDEIERLIAEVK 236
#
#
# >ECU06g0840
# Length = 193
#
# Score = 28.1 bits (61), Expect = 3.5
# Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
#
# Query: 68 EKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAI 107
# +++LE +E + KE+++ L+ A+D+A R+Y E K + +
# Sbjct: 150 QEILEFVEDVLAKEEER---LEYAVDSALRRYFERKGVML 186
#
#
# >PM0513
# Length = 364
#
# Score = 27.7 bits (60), Expect = 3.7
# Identities = 18/44 (40%), Positives = 21/44 (46%), Gaps = 2/44 (4%)
#
# Query: 1 MGLTDFWKTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLS 44
# MG T F P+ R D HD KD K HD+ A + S LS
# Sbjct: 211 MGQTQF--MPSSYLRYAADGNHDGEKDIWKNHDDVFASIASYLS 252
#
#
# >SPy1904
# Length = 992
#
# Score = 27.7 bits (60), Expect = 3.9
# Identities = 29/105 (27%), Positives = 52/105 (48%), Gaps = 9/105 (8%)
#
# Query: 17 EYDK-LHDY-LKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQL 74
# +Y K LH Y +K+A+ HD+ + + + YK +PDMP IP + + E +L L
# Sbjct: 446 QYGKCLHQYTVKEAI--HDKAVLGFQVE---YKTTIPDMPEDSIPEEAY-DHEEHMLAVL 499
#
# Query: 75 EKYIDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKEK 119
# + I++ + K+ + I + L K++A + + KK K
# Sbjct: 500 DSIINQSR-KKLGFNNGIGQTFEGLLTVKSIARAQAYYDLMKKVK 543
#
#
# >YDR089w
# Length = 869
#
# Score = 27.7 bits (60), Expect = 4.2
# Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
#
# Query: 19 DKLHDY---LKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANP 62
# D LHD L+DA + E+ + +SD SA+ P+ + +PA+P
# Sbjct: 193 DVLHDLENKLEDATEPAVEQRSLNRSDESAHTSSSPEANNSSLPASP 239
#
#
# >RSc0009
# Length = 514
#
# Score = 27.7 bits (60), Expect = 4.3
# Identities = 15/44 (34%), Positives = 24/44 (54%)
#
# Query: 77 YIDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKEKE 120
# Y+ E+ +RA+ S I + YL +A A + E A+Q K +E
# Sbjct: 173 YLATEEGQRATQISLISQVAKAYLNERAYAEQLELAQQTLKGRE 216
#
#
# >CAC2687
# Length = 714
#
# Score = 27.7 bits (60), Expect = 4.4
# Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
#
# Query: 62 PFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKE 118
# P++ ++ VL ++ KY K+K+ +K + Y KY E I EEK + KE
# Sbjct: 540 PYIIFSDSVLSEMCKYYPKDKNSMLQIKGVGEIKYNKYGE-----IFEEKIREYIKE 591
#
#
# >MT2262
# Length = 236
#
# Score = 27.7 bits (60), Expect = 4.6
# Identities = 18/59 (30%), Positives = 27/59 (45%)
#
# Query: 73 QLEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKEKEKKEREERLKNG 131
# Q ++ K A + +A A RK L L+ +E +AE+A ER ER+ G
# Sbjct: 58 QSRRHTKKGPVAPAPMTAAQARARRKSLAGPKLSREERRAEKAANRARMTERRERMMAG 116
#
#
# >XF0368
# Length = 831
#
# Score = 27.3 bits (59), Expect = 4.8
# Identities = 15/49 (30%), Positives = 25/49 (50%), Gaps = 1/49 (2%)
#
# Query: 32 HDEKMAEVKSDLSAYKKGMPDMPSKGIP-ANPFVEKNEKVLEQLEKYID 79
# + +K+ E+ D A G+P PS G P NP + + L L++ +D
# Sbjct: 211 YGKKLNELNLDEMASLAGIPKFPSSGNPITNPARARERRDLYVLQRMVD 259
#
#
# >YHR164c
# Length = 1522
#
# Score = 27.3 bits (59), Expect = 5.1
# Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
#
# Query: 26 KDALKKHDEKMAEVKSDLSAYK--KGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKD 83
# +++L+ D+ + +++ DL+ D+PS I A P VEK +V + +D D
# Sbjct: 205 RESLRNIDDILDDIEGDLTIKPTITKFSDLPSSPIKA-PNVEKKAEVNAEEVDKMDSTGD 263
#
# Query: 84 KRASLKSAIDTAYRKYLE 101
# S ID +KY+E
# Sbjct: 264 SNDGDDSLIDILTQKYVE 281
#
#
# >aq_2107
# Length = 619
#
# Score = 27.3 bits (59), Expect = 5.1
# Identities = 30/91 (32%), Positives = 41/91 (44%), Gaps = 7/91 (7%)
#
# Query: 16 DEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNE-KVLEQL 74
# D Y L L+D KK EK++E+ K G P PS + NP K + + L+ L
# Sbjct: 374 DTYPSLDVDLEDYFKKFGEKISEI-----LLKIGFPPCPSNVMVRNPEWNKGKTEWLKTL 428
#
# Query: 75 EKYIDKEKDKRASLKSAIDTAYRKYLEYKAL 105
# EK+ K D +LK I +R K L
# Sbjct: 429 EKWFSK-PDPENTLKLGIFLDFRNVFGDKTL 458
#
#
# >MA3827
# Length = 73
#
# Score = 27.3 bits (59), Expect = 5.3
# Identities = 17/61 (27%), Positives = 31/61 (49%), Gaps = 3/61 (4%)
#
# Query: 36 MAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTA 95
# +AE+ + +P +G P + E EKV E +++YI+ D + ++S I+ A
# Sbjct: 13 LAELHGNFLNIYDAFHKIPMEGSPDS---ENAEKVQETVQEYINYLNDHKRIIESLINNA 69
#
# Query: 96 Y 96
# Y
# Sbjct: 70 Y 70
#
#
# >L173921
# Length = 739
#
# Score = 27.3 bits (59), Expect = 5.4
# Identities = 24/91 (26%), Positives = 42/91 (45%), Gaps = 8/91 (8%)
#
# Query: 27 DALKKHD---EKMAEVKSD--LSAYKKG--MPDMPSKGIPAN-PFVEKNEKVLEQLEKYI 78
# D KK+D + +V D + Y KG + +P + + P + KV E+++K+
# Sbjct: 338 DLFKKYDLDAVNIGQVTDDGFYTLYHKGEMVAHVPVDSLAEDAPTYYREAKVPERIQKFT 397
#
# Query: 79 DKEKDKRASLKSAIDTAYRKYLEYKALAIKE 109
# D EK SA+ ++K L +A K+
# Sbjct: 398 DSEKYLPEITDSAVSEIFKKLLAQPTIASKK 428
#
#
# >BS_dnaK
# Length = 611
#
# Score = 27.3 bits (59), Expect = 5.5
# Identities = 34/120 (28%), Positives = 60/120 (49%), Gaps = 5/120 (4%)
#
# Query: 11 TEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKV 70
# T K+++ K L D + K AE +D A KK ++ ++ A+ V + EK
# Sbjct: 463 TGKEQNITIKSSSGLSDEEIERMVKEAEENADADAKKKEEIEVRNE---ADQLVFQTEKT 519
#
# Query: 71 LEQLEKYIDKEKDKRAS-LKSAIDTAYRKYLEYKALAIKEEKAEQAKKEKEKKEREERLK 129
# L+ LE +D+E+ K+A+ K A+ A K E++ + K+++ + +E K EE K
# Sbjct: 520 LKDLEGKVDEEQVKKANDAKDALKAAIEKN-EFEEIKAKKDELQTIVQELSMKLYEEAAK 578
#
#
# >SSO1497
# Length = 111
#
# Score = 27.3 bits (59), Expect = 5.6
# Identities = 11/42 (26%), Positives = 27/42 (64%)
#
# Query: 8 KTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKG 49
# + P+ ++DE YL++ +K++D+ ++++ S L+ +KG
# Sbjct: 14 RVPSSTQKDELVNQVKYLEEQVKEYDQVISDIGSGLNMKRKG 55
#
#
# >CAC3414
# Length = 577
#
# Score = 27.3 bits (59), Expect = 5.7
# Identities = 11/27 (40%), Positives = 17/27 (62%)
#
# Query: 21 LHDYLKDALKKHDEKMAEVKSDLSAYK 47
# +H Y K KK+DE A V+ +L+A +
# Sbjct: 178 VHPYFKRVFKKYDELNASVQENLTAIR 204
#
#
# >YOR270c
# Length = 840
#
# Score = 27.3 bits (59), Expect = 5.8
# Identities = 17/61 (27%), Positives = 29/61 (46%), Gaps = 1/61 (1%)
#
# Query: 13 KKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLE 72
# ++ D ++ + Y LKKHD K+ E +D G +P G + +V +N LE
# Sbjct: 60 RRLDNVERQYRYFYSLLKKHDIKLYEGDTDKYLDGSGELYVPPSGSVIDDYV-RNASYLE 118
#
# Query: 73 Q 73
# +
# Sbjct: 119 E 119
#
#
# >YMR162c
# Length = 1656
#
# Score = 27.3 bits (59), Expect = 5.9
# Identities = 17/58 (29%), Positives = 32/58 (54%), Gaps = 7/58 (12%)
#
# Query: 68 EKVLEQ---LEKYIDKEKDKRASLKSAIDTAYRKYLEY----KALAIKEEKAEQAKKE 118
# E VL+Q LE+ +D+E R SL++++ + R L K+L++K + +K+
# Sbjct: 874 ELVLQQRKSLERMVDEEAMARTSLRNSLSSVPRASLSLQAVRKSLSMKNSRTRDPEKQ 931
#
#
# >HI1354
# Length = 557
#
# Score = 26.9 bits (58), Expect = 6.5
# Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
#
# Query: 7 WKTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIP-ANPFVE 65
# W+ D +D L+ Y + +KK + E+ D +G P K P + +E
# Sbjct: 101 WEGEPRYASDYFDALYGYAVELIKKGLAYVDELSPDEMREYRGTLTEPGKNSPYRDRTIE 160
#
# Query: 66 KNEKVLEQLEKYIDKEKDKRASLKSAIDTA 95
# +N + E+++ + + +ASL++ ID A
# Sbjct: 161 ENLALFEKMKN--GEFAEGKASLRAKIDMA 188
#
#
# >CAC1883_1
# Length = 1592
#
# Score = 26.9 bits (58), Expect = 7.3
# Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
#
# Query: 18 YDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKY 77
# Y + D K +L+++ EKM E+K + + K + + +K +K ++L K
# Sbjct: 76 YQEQLDKTKKSLQENSEKMLELKEKVESAKTAWEESKQELGANAEATQKLKKDYDELNKE 135
#
# Query: 78 IDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKEKEKKER 124
# + + K S ++D Y L + +K +AE A K E+
# Sbjct: 136 YTQTEQKVRSASKSVD-GYTIQLSNQEAKLKTMQAELATTNKHIAEQ 181
#
#
# >APE2444
# Length = 356
#
# Score = 26.9 bits (58), Expect = 7.4
# Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 18/98 (18%)
#
# Query: 14 KRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQ 73
# + D Y K + D +K K + Y+KG+PD+ + PA+ V VL
# Sbjct: 155 RMDPYYKPEKSILDGMK---------KVFMETYEKGLPDLSGRRYPADKVV-----VLLL 200
#
# Query: 74 LEKYIDKEKD----KRASLKSAIDTAYRKYLEYKALAI 107
# LE ID + R S I T + Y +K AI
# Sbjct: 201 LEANIDALRSVASMARTYGLSLIKTQRKYYRLWKRKAI 238
#
#
# >Cgl2745
# Length = 212
#
# Score = 26.9 bits (58), Expect = 7.4
# Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
#
# Query: 59 PANPFVEKNEKVLEQLEKY-IDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQ 114
# P + E++ EQ+ Y +D+E+D+ A L D A+R+ ++Y +LA K E E+
# Sbjct: 119 PGERVIVDREEIREQVLLYRVDEERDE-AKLAKRFDAAFRRIVDY-SLAKKTETPER 173
#
#
# >SA0954
# Length = 339
#
# Score = 26.9 bits (58), Expect = 7.4
# Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
#
# Query: 12 EKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLS---AYKKGMPD---MPSKGIPANPFVE 65
# E++RD+YD+ ++ HDE+ E S LS YK+ + + G A P V+
# Sbjct: 205 EQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQAKYKQKSTEELGIEDDGYYAEPEVD 264
#
# Query: 66 KNEKVLEQ--------------LEKYIDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEK 111
# E +Q + Y + K++R + SA+ + E + + +
# Sbjct: 265 PKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKNQPSAVSQRRMNFEERRQIYNNDIS 324
#
# Query: 112 AEQAKKE-KEKKERE 125
# E+ E K+KKE+E
# Sbjct: 325 EERNSSEVKDKKEQE 339
#
#
# >STM3003
# Length = 748
#
# Score = 26.9 bits (58), Expect = 7.4
# Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
#
# Query: 31 KHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKS 90
# +H+EK+ + Y+ +P M G P+ E+ + Q + + DK +L++
# Sbjct: 446 EHEEKLGSRIDGIGLYRTEIPFMLQSGFPS------EEEQVAQYQGMLQMFNDKPVTLRT 499
#
# Query: 91 AIDTAYRKYLEYKALAIKEE 110
# +D K L Y + I EE
# Sbjct: 500 -LDVGADKQLPY--MPISEE 516
#
#
# >CAC2082
# Length = 399
#
# Score = 26.9 bits (58), Expect = 7.9
# Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
#
# Query: 78 IDKEKDKRASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKEKEKKEREERLKNG 131
# I++E + SLK A+DT+ + Y++ K + E AK+ EK E + NG
# Sbjct: 265 INEEMNSFVSLKRALDTSIKTYIQNKC-----NQLEIAKRMLEKNSPEILIVNG 313
#
#
# >SP1559
# Length = 450
#
# Score = 26.9 bits (58), Expect = 7.9
# Identities = 21/69 (30%), Positives = 34/69 (48%), Gaps = 3/69 (4%)
#
# Query: 27 DALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRA 86
# D K DEK AE+++ L A + +P ++G+ V+ E L + E Y+
# Sbjct: 116 DGFKLDDEKEAEIEALLDAEEDTLPRPSAEGL--GILVDYPEG-LRKYEGYLVSTGTPLD 172
#
# Query: 87 SLKSAIDTA 95
# +K A+DTA
# Sbjct: 173 GMKVALDTA 181
#
#
# >ECs3686
# Length = 748
#
# Score = 26.9 bits (58), Expect = 8.1
# Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
#
# Query: 31 KHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKS 90
# +H+EK+ + Y+ +P M G P+ E+ + Q + + DK +L++
# Sbjct: 446 EHEEKLGSRIDGIGLYRTEIPFMLQSGFPS------EEEQVAQYQGMLQMFNDKPVTLRT 499
#
# Query: 91 AIDTAYRKYLEYKALAIKEE 110
# +D K L Y + I EE
# Sbjct: 500 -LDVGADKQLPY--MPISEE 516
#
#
# >ZptsP
# Length = 748
#
# Score = 26.9 bits (58), Expect = 8.1
# Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
#
# Query: 31 KHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKS 90
# +H+EK+ + Y+ +P M G P+ E+ + Q + + DK +L++
# Sbjct: 446 EHEEKLGSRIDGIGLYRTEIPFMLQSGFPS------EEEQVAQYQGMLQMFNDKPVTLRT 499
#
# Query: 91 AIDTAYRKYLEYKALAIKEE 110
# +D K L Y + I EE
# Sbjct: 500 -LDVGADKQLPY--MPISEE 516
#
#
# >ptsP
# Length = 748
#
# Score = 26.9 bits (58), Expect = 8.1
# Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
#
# Query: 31 KHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKS 90
# +H+EK+ + Y+ +P M G P+ E+ + Q + + DK +L++
# Sbjct: 446 EHEEKLGSRIDGIGLYRTEIPFMLQSGFPS------EEEQVAQYQGMLQMFNDKPVTLRT 499
#
# Query: 91 AIDTAYRKYLEYKALAIKEE 110
# +D K L Y + I EE
# Sbjct: 500 -LDVGADKQLPY--MPISEE 516
#
#
# >RC0808
# Length = 957
#
# Score = 26.6 bits (57), Expect = 8.3
# Identities = 23/61 (37%), Positives = 35/61 (56%), Gaps = 6/61 (9%)
#
# Query: 71 LEQLEKYIDKEKDKRASLKSAID--TAYRKYLEYKALAIKEEKAEQAKKEKEKKEREERL 128
# LE+L +YIDK+ +K + ID T +KY+ LA ++EK K KE K ++E L
# Sbjct: 141 LERLNQYIDKDLEKEHIKEIVIDEATKTKKYI----LAGEDEKTLWDIKSKELKTKQEEL 196
#
# Query: 129 K 129
# +
# Sbjct: 197 E 197
#
#
# >SPAC19B12.05c
# Length = 723
#
# Score = 26.6 bits (57), Expect = 8.3
# Identities = 17/64 (26%), Positives = 31/64 (47%), Gaps = 5/64 (7%)
#
# Query: 10 PTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLSAYKKGMPDMPSKGIPANPFVEKNEK 69
# P E +DE D + D + + +E+ E S S+Y + +P K + + F++ E
# Sbjct: 343 PLEIPKDEPDSV-----DEINEENEETPEYDSSNSSYAQDSSTIPEKTLLKDTFLQNREA 397
#
# Query: 70 VLEQ 73
# + EQ
# Sbjct: 398 LEEQ 401
#
#
# >SSO3130
# Length = 384
#
# Score = 26.6 bits (57), Expect = 8.8
# Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
#
# Query: 22 HDYLKDALKKHDEKMAEVKSDLSAY-KKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDK 80
# H YL+D +K E EV S+L Y + M + G A FVE E+ E + K +
# Sbjct: 27 HPYLEDLARKVREGKLEVLSNLDYYIEMTMKSVERIGGKAY-FVENAEQAREIVGKIVG- 84
#
# Query: 81 EKDKRASLKS---AIDTAYRKYLE 101
# KR + A +T RKYL+
# Sbjct: 85 -NGKRVVMGKSMVAYETGIRKYLQ 107
#
#
# >Cj1116c
# Length = 645
#
# Score = 26.6 bits (57), Expect = 9.4
# Identities = 17/55 (30%), Positives = 31/55 (55%), Gaps = 2/55 (3%)
#
# Query: 67 NEKVLEQLEKYIDKEKDKR-ASLKSAIDTAYRKYLEYKALAIKEEKAEQAKKEKE 120
# +EK+ E L+ Y+ K D+R +K ++T Y+ +E A+ EE+ + K +E
# Sbjct: 563 SEKMAESLDDYVKKTLDERYKDVKDTLNT-YKGAIETMVAALYEEETIEGNKVRE 616
#
#
# >jhp0199
# Length = 621
#
# Score = 26.6 bits (57), Expect = 9.6
# Identities = 18/65 (27%), Positives = 34/65 (51%), Gaps = 7/65 (10%)
#
# Query: 64 VEKNEKVLEQLE------KYIDKEKDKRASLKSAIDTAYRKYLEYKAL-AIKEEKAEQAK 116
# V NE+VLEQ++ YI+K+ + A + S + + K+ +K + + E E+ +
# Sbjct: 528 VPLNERVLEQIKIECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLE 587
#
# Query: 117 KEKEK 121
# K + K
# Sbjct: 588 KFRPK 592
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.306 0.127 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,382,302
Number of Sequences: 192987
Number of extensions: 628567
Number of successful extensions: 4184
Number of sequences better than 10.0: 556
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 386
Number of HSP's that attempted gapping in prelim test: 3078
Number of HSP's gapped (non-prelim): 997
length of query: 131
length of database: 59,019,183
effective HSP length: 107
effective length of query: 24
effective length of database: 38,369,574
effective search space: 920869776
effective search space used: 920869776
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 57 (26.6 bits)
S2: 57 (26.6 bits)