WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract
RepeatMasker Server unavailable.Reference: Gish, Warren (1994-1997). unpublished. Gish, Warren and David J. States (1993). Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-72.Notice: statistical significance is estimated under the assumption that the equivalent of one entire reading frame in the query sequence codes for protein and that significant alignments will involve only coding reading frames.
Query= B05B07.seq(1>549) (509 letters)
Translating both strands of query sequence in all 6 reading framesDatabase: nr 625,274 sequences; 197,782,623 total letters.Observed Numbers of Database Sequences Satisfying Various EXPECTation Thresholds (E parameter values) Histogram units: = 3 Sequences : less than 3 sequences EXPECTation Threshold (E parameter) | V Observed Counts--> 10000 963 165 |======================================================= 6310 798 105 |=================================== 3980 693 128 |========================================== 2510 565 143 |=============================================== 1580 422 101 |================================= 1000 321 54 |================== 631 267 53 |================= 398 214 31 |========== 251 183 36 |============ 158 147 22 |======= 100 125 10 |=== 63.1 115 25 |======== 39.8 90 9 |=== 25.1 81 6 |== 15.8 75 8 |== >>>>>>>>>>>>>>>>>>>>> Expect = 10.0, Observed = 67 <<<<<<<<<<<<<<<<< 10.0 67 10 |=== 6.31 57 6 |== 3.98 51 4 |= 2.51 47 4 |= 1.58 43 3 |= 1.00 40 2 |: 0.63 38 4 |= 0.40 34 2 |: 0.25 32 1 |: 0.16 31 1 |: 0.10 30 1 |: 0.063 29 0 | 0.040 29 1 |: 0.025 28 0 | 0.016 28 2 |: 0.010 26 1 |: 0.0063 25 0 | 0.0040 25 0 | 0.0025 25 0 | 0.0016 25 1 |: Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N gi|7487233|pir||T00745hypothetical protein T20B5.1 - ... +2 620 1.5e-59 1 gi|11288364|pir||T48066hypothetical protein F26K9.200... +2 365 1.6e-32 1 gi|9759256|dbj|BAB09691.1|(AB018111) contains similar... +2 347 1.3e-30 1 gi|11288366|pir||T49045hypothetical protein T5P19.90 ... +2 323 4.4e-28 1 gi|9625016ref|NP_062559.1| hypothetical protein 628 [... +2 184 4.6e-18 2 gi|5901988ref|NP_009006.1| JM5 protein [Homo sapiens]... +2 207 2.1e-15 1 gi|6321662ref|NP_011739.1| Ygr223cp [Saccharomyces ce... +2 190 3.1e-13 1 gi|7503172|pir||T31883hypothetical protein F41E6.13 -... +2 184 1.2e-12 1 gi|7706294ref|NP_057087.1| CGI-50 protein [Homo sapie... +2 183 1.7e-12 1 gi|7661580ref|NP_056425.1| DKFZP434J154 protein [Homo... +2 183 1.9e-12 1 gi|7295146|gb|AAF50471.1|(AE003556) CG7986 gene produ... +2 181 2.9e-12 1 gi|7298770|gb|AAF53981.1|(AE003669) CG8678 gene produ... +2 180 4.2e-12 1 gi|7299116|gb|AAF54315.1|(AE003681) CG11975 gene prod... +2 175 6.5e-12 1 gi|6321133ref|NP_011211.1| Yfr021wp [Saccharomyces ce... +2 178 7.9e-12 1 gi|8347062|emb|CAB93848.1|(AL358272) conserved hypoth... +2 174 1.0e-11 1 gi|7509665|pir||T26730hypothetical protein Y39A1A.1 -... +2 176 1.1e-11 1 gi|8922208ref|NP_060453.1| hypothetical protein FLJ10... +2 170 4.5e-11 1 gi|12740183ref|XP_008266.2| hypothetical protein FLJ1... +2 170 4.6e-11 1 gi|12043551|emb|CAC19764.1|(AL512496) WD domain prote... +2 166 8.5e-11 1 gi|7708614|emb|CAB90161.1|(AL355013) hypothetical pro... +2 161 2.3e-10 1 gi|11359433|pir||T51055hypothetical protein B12F1.70 ... +2 157 1.1e-09 1 gi|7673610|gb|AAF66949.1|AF229635_1(AF229635) DXImx38... +2 151 3.1e-09 1 gi|7269952|emb|CAB79769.1|(AL161577) putative protein... +2 146 6.6e-09 1 gi|6325157ref|NP_015225.1| Ypl100wp [Saccharomyces ce... +2 139 1.3e-07 1 gi|6226620|sp|Q94775|GBLP_TRYBBGUANINE NUCLEOTIDE-BIN... +2 110 0.0015 1 gi|9280639|gb|AAF86508.1|AC002560_1(AC002560) F21B7.1... +2 90 0.0075 2 gi|3859572|gb|AAC72849.1|(AF100286) activated protein... +2 104 0.010 1 gi|3025125|sp|P74598|YE91_SYNY3HYPOTHETICAL WD-REPEAT... +2 104 0.012 1 gi|3859574|gb|AAC72850.1|(AF100287) activated protein... +2 100 0.032 1 gi|3776567|gb|AAC64884.1|(AC005388) Strong similarity... +2 80 0.090 2 gi|6323763ref|NP_013834.1| G-beta like protein; Asc1p... +2 95 0.13 1 gi|10176800|dbj|BAB09939.1|(AB022214) contains simila... +2 98 0.18 1 gi|3023853|sp|Q10281|GBLP_SCHPOGUANINE NUCLEOTIDE-BIN... +2 92 0.28 1 gi|11992988|gb|AAA56865.2|(L37885) guanine nucleotide... +2 92 0.28 1 gi|10434795|dbj|BAB14380.1|(AK023054) unnamed protein... +2 95 0.34 1 gi|7490155|pir||T40283beta-transducin - fission yeast... +2 92 0.35 1 gi|3024893|sp|P74442|Y143_SYNY3HYPOTHETICAL WD-REPEAT... +2 97 0.36 1 gi|10438048|dbj|BAB15156.1|(AK025510) unnamed protein... +2 95 0.45 1 gi|11139244|gb|AAG31640.1|AF309554_1(AF309554) meioti... +2 89 0.51 1 gi|10437122|dbj|BAB14986.1|(AK024754) unnamed protein... +2 88 0.61 1 gi|10764839|gb|AAG22830.1|AF306867_1(AF306867) unknow... +2 83 0.72 1 gi|11346447|pir||T43158probable GTP-binding protein b... +2 87 0.73 1 gi|4972734|gb|AAD34762.1|(AF132174) unknown [Drosophi... +2 87 0.76 1 gi|7292701|gb|AAF48098.1|(AE003487) CG1905 gene produ... +2 95 0.80 1 gi|11139411|gb|AAG31685.1|AF125254_1(AF125254) activa... +2 86 0.82 1 gi|7492315|pir||T39922pop3, a WD repeat protein - fis... +2 86 0.82 1 gi|7302720|gb|AAF57798.1|(AE003802) CG10931 gene prod... +2 85 0.89 1 gi|7303694|gb|AAF58744.1|(AE003828) CG12325 gene prod... +2 89 0.96 1 gi|1169867|sp|P46800|GBLP_DICDIGUANINE NUCLEOTIDE-BIN... +2 84 0.96 1 gi|7293188|gb|AAF48571.1|(AE003501) katanin-80 gene p... +2 83 0.97 1
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WARNING: Descriptions of 17 database sequences were not reported due to the limiting value of parameter V = 50. >gi|7487233|pir||T00745 hypothetical protein T20B5.1 - Arabidopsis thaliana >gi|2623295|gb|AAB86441.1| (AC002409) hypothetical protein [Arabidopsis thaliana] Length = 369 Frame 2 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 369 0 150 300 Plus Strand HSPs: Score = 620 (218.3 bits), Expect = 1.5e-59, P = 1.5e-59 Identities = 123/160 (76%), Positives = 136/160 (85%), Frame = +2 Query: 14 GLHKGQVRVEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRL 193 GL++G++RVEHFGLN+ ++INAHDS IAC TLTLDGLLLATAS KGTLIRIFNTMDG+RL Sbjct: 154 GLNRGEIRVEHFGLNMVQIINAHDSSIACMTLTLDGLLLATASTKGTLIRIFNTMDGTRL 213 Query: 194 QEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQGPALF 373 QEVRRGVDRA+I SIALSPNVQWLA SSDKGTVH+FSLRVRV GEDS + N G L Sbjct: 214 QEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVVGEDSYSTEN---GALLT 270 Query: 374 HQNSSSSLDPLISPNTGANPNSSLSFMRGVLPKYFSSEWS 493 QN S+SL L+SP G NP SSLSFMRGVLPKYFSSEWS Sbjct: 271 QQNYSNSLQGLVSPTIGTNPGSSLSFMRGVLPKYFSSEWS 310 >gi|11288364|pir||T48066 hypothetical protein F26K9.200 - Arabidopsis thaliana >gi|7362757|emb|CAB83127.1| (AL162651) putative protein [Arabidopsis thaliana] Length = 432 Frame 2 hits (HSPs): __________________ __________________________________________________ Database sequence: | | | | 432 0 150 300 Plus Strand HSPs: Score = 365 (128.5 bits), Expect = 1.6e-32, P = 1.6e-32 Identities = 89/160 (55%), Positives = 108/160 (67%), Frame = +2 Query: 14 GLHKGQVRVEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRL 193 GL KGQVR+EH+ TK + AHDS+IACF LT DG LLATAS KGTL+RIFNT+DG+ Sbjct: 225 GLQKGQVRIEHYASKRTKFVMAHDSRIACFALTQDGHLLATASSKGTLVRIFNTVDGTLR 284 Query: 194 QEV--------RRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPN 349 QE + G DRAEI S+A S N QWLA SSDKGTVHVF L+V +S +Q Sbjct: 285 QESGTSEDEIGKEGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFGLKV-----NSGSQVK 339 Query: 350 AVQGPALFHQNSSSSLDPLISPNTGANPNSSLSFMRGVLPKYFSSEWS 493 SS + P +P++ P+SSLS + VLP+YFSSEWS Sbjct: 340 -----------DSSRIAPDATPSS---PSSSLSLFK-VLPRYFSSEWS 372 >gi|9759256|dbj|BAB09691.1| (AB018111) contains similarity to unknown protein~gene_id:K2A11.2~pir||T00745 [Arabidopsis thaliana] Length = 374 Frame 2 hits (HSPs): __________________ __________________________________________________ Database sequence: | | | | 374 0 150 300 Plus Strand HSPs: Score = 347 (122.2 bits), Expect = 1.3e-30, P = 1.3e-30 Identities = 71/128 (55%), Positives = 90/128 (70%), Frame = +2 Query: 14 GLHKGQVRVEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRL 193 G H GQV+V NV K I AHDS IAC TLTLDG LLATAS KGTLIRIFN +DG+ L Sbjct: 181 GFHPGQVQVHDLRWNVIKFIKAHDSAIACMTLTLDGSLLATASTKGTLIRIFNAVDGTLL 240 Query: 194 QEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQG--PA 367 QE RRGV+RAEI ++A+S N++W+AASS+KGT+HVF LR + D + + ++ P Sbjct: 241 QEFRRGVERAEIYNVAISSNLKWVAASSEKGTLHVFRLRPDILSFDPASSSSFIRVILPK 300 Query: 368 LFHQNSSS 391 ++N S Sbjct: 301 YLYENERS 308 >gi|11288366|pir||T49045 hypothetical protein T5P19.90 - Arabidopsis thaliana >gi|7594522|emb|CAB88047.1| (AL163972) putative protein [Arabidopsis thaliana] Length = 400 Frame 2 hits (HSPs): _________________________ __________________________________________________ Database sequence: | | | | 400 0 150 300 Plus Strand HSPs: Score = 323 (113.7 bits), Expect = 4.4e-28, P = 4.4e-28 Identities = 79/159 (49%), Positives = 102/159 (64%), Frame = +2 Query: 14 GLHKGQVRVEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRL 193 G+ +G+VRVEHFGLN+ ++INAHDS IAC TLTLDGLLLATAS KGTLIRIFNTMDG+RL Sbjct: 182 GIRRGEVRVEHFGLNMVQIINAHDSNIACMTLTLDGLLLATASTKGTLIRIFNTMDGTRL 241 Query: 194 QE--VRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRV----FGEDSVTQPN-- 349 QE V+ V++ + + V+ D+ ++ +L V D T Sbjct: 242 QEDSVKVMVEQTSCHDLFRKTLVR---RGVDRADIYSIALSPNVQWLAVSSDKGTVHIFS 298 Query: 350 ---AVQGPALF---HQNSSSSLDPLISPNTGANPNSSLSFMR 457 V G + H+ SS+SL PL+SP +GANP SSLSF+R Sbjct: 299 LRVRVIGEDAYSTEHETSSNSLQPLVSPASGANPGSSLSFLR 340 Score = 268 (94.3 bits), Expect = 3.2e-22, P = 3.2e-22 Identities = 72/136 (52%), Positives = 86/136 (63%), Frame = +2 Query: 110 TLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIALSPNVQWLAASSDKGT 289 T+DG L SVK ++ + D R VRRGVDRA+I SIALSPNVQWLA SSDKGT Sbjct: 235 TMDGTRLQEDSVK-VMVEQTSCHDLFRKTLVRRGVDRADIYSIALSPNVQWLAVSSDKGT 293 Query: 290 VHVFSLRVRVFGEDSV-----TQPNAVQ---GPALFHQNSSSSLDPLISPNTGANP--NS 439 VH+FSLRVRV GED+ T N++Q PA N SSL L ++ A+ + Sbjct: 294 VHIFSLRVRVIGEDAYSTEHETSSNSLQPLVSPAS-GANPGSSLSFLRVGSSHASVWYLT 352 Query: 440 SLSFMRGVLPKYFSSEWS 493 S + GVLPKYFSSEWS Sbjct: 353 SSDIVAGVLPKYFSSEWS 370 >gi|9625016 ref|NP_062559.1| hypothetical protein 628 [Homo sapiens] >gi|11427493 ref|XP_008607.1| hypothetical protein 628 [Homo sapiens] >gi|3860004|gb|AAC72952.1| (AF091083) unknown [Homo sapiens] Length = 286 Frame 2 hits (HSPs): __________________ ____ __________________________________________________ Database sequence: | | | | | | | 286 0 50 100 150 200 250 Plus Strand HSPs: Score = 184 (64.8 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18 Identities = 40/99 (40%), Positives = 56/99 (56%), Frame = +2 Query: 14 GLHKGQVRVEHFGLNVTKLIN--AHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGS 187 G H G V++ ++ AH+ ++C L L G +ATAS KGTLIRIF+T G Sbjct: 102 GTHTGHVQLVDLASTEKPPVDIPAHEGVLSCIALNLQGTRIATASEKGTLIRIFDTSSGH 161 Query: 188 RLQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFS 304 +QE+RRG A I I + + + SSD GTVH+F+ Sbjct: 162 LIQELRRGSQAANIYCINFNQDASLICVSSDHGTVHIFA 200 Score = 59 (20.8 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18 Identities = 13/22 (59%), Positives = 15/22 (68%), Frame = +2 Query: 428 NPNSSLSFMRGVLPKYFSSEWS 493 N SSL+ LPKYFSS+WS Sbjct: 207 NKQSSLA-SASFLPKYFSSKWS 227 >gi|5901988 ref|NP_009006.1| JM5 protein [Homo sapiens] >gi|11420020 ref|XP_010204.1| JM5 protein [Homo sapiens] >gi|3114828|emb|CAA06754.1| (AJ005897) JM5 [Homo sapiens] >gi|6180172|gb|AAF05825.1|AF196779_2 (AF196779) JM5 protein [Homo sapiens] >gi|12653389|gb|AAH00464.1|AAH00464 (BC000464) JM5 protein [Homo sapiens] Length = 360 Frame 2 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | 360 0 150 300 Plus Strand HSPs: Score = 207 (72.9 bits), Expect = 2.1e-15, P = 2.1e-15 Identities = 58/148 (39%), Positives = 82/148 (55%), Frame = +2 Query: 71 INAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIALSP 250 INAH S IAC +L G ++A+AS KGTLIR+F+T +L E+RRG D A + I S Sbjct: 188 INAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPATLYCINFSH 247 Query: 251 NVQWLAASSDKGTVHVFSLR-VRVFGEDSVTQPNAVQGPALF-HQNSSSSLDPLISP--- 415 + +L ASSDKGTVH+F+L+ R+ ++ + V GP + + +S SL P Sbjct: 248 DSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKV-GPMIGQYVDSQWSLASFTVPAES 306 Query: 416 --------NTGANPNSSLSF-MRGVLPKY 475 NT N NS ++ + G KY Sbjct: 307 ACICAFGRNTSKNVNSVIAICVDGTFHKY 335 >gi|6321662 ref|NP_011739.1| Ygr223cp [Saccharomyces cerevisiae] >gi|1723745|sp|P50079|YG4Q_YEAST HYPOTHETICAL 51.2 KD PROTEIN IN PET54-DIE2 INTERGENIC REGION >gi|1362330|pir||S57686 hypothetical protein YGR223c - yeast (Saccharomyces cerevisiae) >gi|886915|emb|CAA61171.1| (X87941) ORF 448 [Saccharomyces cerevisiae] >gi|1323402|emb|CAA97251.1| (Z73008) ORF YGR223c [Saccharomyces cerevisiae] Length = 448 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | 448 0 150 300 Plus Strand HSPs: Score = 190 (66.9 bits), Expect = 3.1e-13, P = 3.1e-13 Identities = 46/115 (40%), Positives = 69/115 (60%), Frame = +2 Query: 62 TKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIA 241 T +I AH + I L G ++AT SV+GTLIRIF+T +G+ ++E RRGVD+A+I ++ Sbjct: 217 TSIIKAHKNPIKLVRLNRQGTMVATCSVQGTLIRIFSTHNGTLIKEFRRGVDKADIYEMS 276 Query: 242 LSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQGPALFHQNSSSSLDPL 406 SPN LA S+K T+H+F ++F E + T+ N H ++ S PL Sbjct: 277 FSPNGSKLAVLSNKQTLHIF----QIF-ETTNTETNTPD-----HSRANGSSHPL 321 >gi|7503172|pir||T31883 hypothetical protein F41E6.13 - Caenorhabditis elegans >gi|2315459|gb|AAB65961.1| (AF016448) F41E6.13 gene product [Caenorhabditis elegans] Length = 412 Frame 2 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | 412 0 150 300 Plus Strand HSPs: Score = 184 (64.8 bits), Expect = 1.2e-12, P = 1.2e-12 Identities = 54/150 (36%), Positives = 79/150 (52%), Frame = +2 Query: 26 GQVRV-EHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEV 202 G V + + L+ NAH+ IAC +G ++ATAS KGT+IR+++ +G RL E Sbjct: 168 GSVHLFDAINLSSVSTFNAHEGTIACLKFNQEGNMIATASTKGTVIRVYSVPNGHRLFEF 227 Query: 203 RRGVDRA-EINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNA-VQGPALFH 376 RRGV R I S+ S + ++L +SS+ TVHVF L + G D+ +P A +G F Sbjct: 228 RRGVTRCVNIYSLCFSSDSKYLTSSSNTETVHVFKLE-KTEGVDN--KPEASTEGGGWFD 284 Query: 377 Q-NSS-SSLDPLISPNTGANPNSSLSFMRGVLP 469 N + S+ P G + SF LP Sbjct: 285 AINKTFSAYMPSQVLQVGELMTTERSFATAKLP 317 >gi|7706294 ref|NP_057087.1| CGI-50 protein [Homo sapiens] >gi|4929569|gb|AAD34045.1|AF151808_1 (AF151808) CGI-50 protein [Homo sapiens] Length = 438 Frame 2 hits (HSPs): ___________ __________________________________________________ Database sequence: | | | | 438 0 150 300 Plus Strand HSPs: Score = 183 (64.4 bits), Expect = 1.7e-12, P = 1.7e-12 Identities = 43/96 (44%), Positives = 59/96 (61%), Frame = +2 Query: 26 GQVRV-EHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEV 202 G+V+V + L +I AHDS +A G LATAS KGT+IR+F+ +G +L E Sbjct: 177 GEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEF 236 Query: 203 RRGVDRA-EINSIALSPNVQWLAASSDKGTVHVFSL 307 RRGV R I S+A S + +L+ASS+ TVH+F L Sbjct: 237 RRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKL 272 >gi|7661580 ref|NP_056425.1| DKFZP434J154 protein [Homo sapiens] >gi|7512620|pir||T12539 hypothetical protein DKFZp434J154.1 - human >gi|5262613|emb|CAB45746.1| (AL080155) hypothetical protein [Homo sapiens] Length = 454 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | || 454 0 150 300 450 Plus Strand HSPs: Score = 183 (64.4 bits), Expect = 1.9e-12, P = 1.9e-12 Identities = 43/96 (44%), Positives = 59/96 (61%), Frame = +2 Query: 26 GQVRV-EHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEV 202 G+V+V + L +I AHDS +A G LATAS KGT+IR+F+ +G +L E Sbjct: 182 GEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEF 241 Query: 203 RRGVDRA-EINSIALSPNVQWLAASSDKGTVHVFSL 307 RRGV R I S+A S + +L+ASS+ TVH+F L Sbjct: 242 RRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKL 277 >gi|7295146|gb|AAF50471.1| (AE003556) CG7986 gene product [alt 1] [Drosophila melanogaster] >gi|7295147|gb|AAF50472.1| (AE003556) CG7986 gene product [alt 2] [Drosophila melanogaster] Length = 442 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | 442 0 150 300 Plus Strand HSPs: Score = 181 (63.7 bits), Expect = 2.9e-12, P = 2.9e-12 Identities = 39/96 (40%), Positives = 63/96 (65%), Frame = +2 Query: 26 GQVRV-EHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEV 202 G+V++ + L+ +I AHD+ +A + G +ATAS +GT+IR+F++ DGSRL E+ Sbjct: 163 GEVQIFDAINLHAKTMIPAHDTPLAALAFSPSGTEIATASERGTVIRVFSSQDGSRLFEL 222 Query: 203 RRGVDRA-EINSIALSPNVQWLAASSDKGTVHVFSL 307 RRG+ R I S++ S ++L +SS+ TVH+F L Sbjct: 223 RRGLKRCVSIVSLSFSTCAEYLVSSSNTETVHIFRL 258 >gi|7298770|gb|AAF53981.1| (AE003669) CG8678 gene product [Drosophila melanogaster] Length = 466 Frame 2 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | | 466 0 150 300 450 Plus Strand HSPs: Score = 180 (63.4 bits), Expect = 4.2e-12, P = 4.2e-12 Identities = 51/153 (33%), Positives = 78/153 (50%), Frame = +2 Query: 26 GQVRVEHFG-LNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEV 202 G++R+ + L I AHD+ ++ + G LLATAS +GT+IR+F +G R+QE Sbjct: 144 GELRIFNASKLRTGMTIRAHDTSLSALAFSPSGALLATASERGTVIRVFCVKNGQRVQEF 203 Query: 203 RRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQGPALFHQN 382 RRGV I S+ S + +L ASS+ TVHVF + R ++V + A+ A +N Sbjct: 204 RRGVSCVRIASLVFSASGDFLCASSNTETVHVFKIDTRAV--ETV-ELKAIADVAAKSEN 260 Query: 383 SSSSLDPLISPNTGANPNSSLSFMRGVLPKYFSS 484 S+ + P +S G+ K SS Sbjct: 261 SAKEAVASTAAEESCRPVASWG---GMFSKAVSS 291 >gi|7299116|gb|AAF54315.1| (AE003681) CG11975 gene product [Drosophila melanogaster] Length = 340 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | 340 0 150 300 Plus Strand HSPs: Score = 175 (61.6 bits), Expect = 6.5e-12, P = 6.5e-12 Identities = 36/77 (46%), Positives = 49/77 (63%), Frame = +2 Query: 77 AHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIALSPNV 256 AH++ I+C L L G LATA KGTLIRIF+T G ++ E+RRG + A I I + Sbjct: 183 AHEAGISCIALNLQGTRLATAGEKGTLIRIFDTESGKKVSELRRGSNHANIFCINFNHQS 242 Query: 257 QWLAASSDKGTVHVFSL 307 + +SD GT+HVF+L Sbjct: 243 TMVVVASDHGTIHVFNL 259 >gi|6321133 ref|NP_011211.1| Yfr021wp [Saccharomyces cerevisiae] >gi|1176002|sp|P43601|YFJ1_YEAST HYPOTHETICAL 55.1 KDA TRP-ASP REPEATS CONTAINING PROTEIN IN FAB1-PES4 INTERGENIC REGION >gi|1084743|pir||S56276 probable membrane protein YFR021w - yeast (Saccharomyces cerevisiae) >gi|836776|dbj|BAA09260.1| (D50617) YFR021W [Saccharomyces cerevisiae] Length = 500 Frame 2 hits (HSPs): _________ __________________________________________________ Database sequence: | | | | | 500 0 150 300 450 Plus Strand HSPs: Score = 178 (62.7 bits), Expect = 7.9e-12, P = 7.9e-12 Identities = 36/85 (42%), Positives = 52/85 (61%), Frame = +2 Query: 53 LNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEIN 232 L T +I AH +IA ++ DG L+ATAS KGT+IR+F+ G ++ + RRG I Sbjct: 235 LQPTMVIEAHKGEIAAMAISFDGTLMATASDKGTIIRVFDIETGDKIYQFRRGTYATRIY 294 Query: 233 SIALSPNVQWLAASSDKGTVHVFSL 307 SI+ S + Q+LA + TVH+F L Sbjct: 295 SISFSEDSQYLAVTGSSKTVHIFKL 319 >gi|8347062|emb|CAB93848.1| (AL358272) conserved hypothetical protein [Schizosaccharomyces pombe] Length = 364 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | 364 0 150 300 Plus Strand HSPs: Score = 174 (61.3 bits), Expect = 1.0e-11, P = 1.0e-11 Identities = 34/82 (41%), Positives = 53/82 (64%), Frame = +2 Query: 62 TKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIA 241 T ++ AHDS+I+C ++ G +A++S GTLIRI+N+ G ++ E RRG + +A Sbjct: 168 TSIVPAHDSEISCLGISKTGSKIASSSTNGTLIRIWNSETGEKICEFRRGYQHTAVCQLA 227 Query: 242 LSPNVQWLAASSDKGTVHVFSL 307 SP+ LA +S K T+H+FSL Sbjct: 228 FSPDELLLACASKKETLHIFSL 249 >gi|7509665|pir||T26730 hypothetical protein Y39A1A.1 - Caenorhabditis elegans >gi|3880846|emb|CAA21019.1| (AL031633) cDNA EST EMBL:T00867 comes from this gene [Caenorhabditis elegans] Length = 455 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | || 455 0 150 300 450 Plus Strand HSPs: Score = 176 (62.0 bits), Expect = 1.1e-11, P = 1.1e-11 Identities = 40/105 (38%), Positives = 58/105 (55%), Frame = +2 Query: 14 GLHKGQVRVEHFGLNVTK------LINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNT 175 G G V++ H + +I AH + IA L G L+AT S KGT+IR+F+ Sbjct: 259 GFKTGSVQIMHLNALTARESKSPIVIEAHLTDIAQVALNCQGTLVATGSTKGTVIRVFDA 318 Query: 176 MDGSRLQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLR 310 L E+RRG +A + +A SP +LA +SDKGT+H+F +R Sbjct: 319 RTKGPLYELRRGTVQAHLQCMAFSPCSSYLAVASDKGTLHMFGIR 363 >gi|8922208 ref|NP_060453.1| hypothetical protein FLJ10055 [Homo sapiens] >gi|7021882|dbj|BAA91423.1| (AK000917) unnamed protein product [Homo sapiens] Length = 441 Frame 2 hits (HSPs): __________ __________________________________________________ Database sequence: | | | | 441 0 150 300 Plus Strand HSPs: Score = 170 (59.8 bits), Expect = 4.5e-11, P = 4.5e-11 Identities = 37/80 (46%), Positives = 51/80 (63%), Frame = +2 Query: 71 INAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDR-AEINSIALS 247 I AH+ +A T G LA+AS KGT+IR+F+ DG +L E RRG+ R I+S+ S Sbjct: 177 IAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVFS 236 Query: 248 PNVQWLAASSDKGTVHVFSL 307 + Q+L ASS+ TVH+F L Sbjct: 237 MDSQFLCASSNTETVHIFKL 256 >gi|12740183 ref|XP_008266.2| hypothetical protein FLJ10055 [Homo sapiens] Length = 442 Frame 2 hits (HSPs): _________ __________________________________________________ Database sequence: | | | | 442 0 150 300 Plus Strand HSPs: Score = 170 (59.8 bits), Expect = 4.6e-11, P = 4.6e-11 Identities = 37/80 (46%), Positives = 51/80 (63%), Frame = +2 Query: 71 INAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDR-AEINSIALS 247 I AH+ +A T G LA+AS KGT+IR+F+ DG +L E RRG+ R I+S+ S Sbjct: 178 IAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVFS 237 Query: 248 PNVQWLAASSDKGTVHVFSL 307 + Q+L ASS+ TVH+F L Sbjct: 238 MDSQFLCASSNTETVHIFKL 257 >gi|12043551|emb|CAC19764.1| (AL512496) WD domain protein; conserved hypothetical protein; highly similar to S. cerevisiae YFR021W [Schizosaccharomyces pombe] Length = 373 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | 373 0 150 300 Plus Strand HSPs: Score = 166 (58.4 bits), Expect = 8.5e-11, P = 8.5e-11 Identities = 37/84 (44%), Positives = 48/84 (57%), Frame = +2 Query: 59 VTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSI 238 +TK I AH +AC DG +LATAS G +IR+F G RL + RRG A+I SI Sbjct: 181 ITK-IEAHKDSLACLAFNSDGTMLATASDNGRIIRVFAIPSGQRLYQFRRGSLPAQIYSI 239 Query: 239 ALSPNVQWLAASSDKGTVHVFSLR 310 A P+ L +S TVH+F L+ Sbjct: 240 AFHPDSSLLTVTSSTQTVHIFRLK 263 >gi|7708614|emb|CAB90161.1| (AL355013) hypothetical protein [Schizosaccharomyces pombe] Length = 335 Frame 2 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | 335 0 150 300 Plus Strand HSPs: Score = 161 (56.7 bits), Expect = 2.3e-10, P = 2.3e-10 Identities = 35/80 (43%), Positives = 48/80 (60%), Frame = +2 Query: 68 LINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIALS 247 LI+ H S + G L+ATAS KGT+IR+ T DG + E+RRG A I SI+ Sbjct: 162 LIHCHSSAVQVVDFHPRGHLIATASAKGTVIRVITTSDGELVTELRRGYIPASIVSISFH 221 Query: 248 PNVQWLAASSDKGTVHVFSL 307 P +LA +S+ GT+HVF + Sbjct: 222 PVEPFLACASENGTIHVFKI 241 >gi|11359433|pir||T51055 hypothetical protein B12F1.70 [imported] - Neurospora crassa >gi|9368558|emb|CAB98219.1| (AL390091) conserved hypothetical protein [Neurospora crassa] Length = 421 Frame 2 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | 421 0 150 300 Plus Strand HSPs: Score = 157 (55.3 bits), Expect = 1.1e-09, P = 1.1e-09 Identities = 46/139 (33%), Positives = 72/139 (51%), Frame = +2 Query: 23 KGQVRV-EHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQE 199 +G V V + L ++ AH S + L DG +LATAS GT+IR+F+ G +L + Sbjct: 169 RGDVLVYDALNLKTVNVVEAHKSPLCAIALNHDGSMLATASETGTIIRVFSLPQGQKLFQ 228 Query: 200 VRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQGPALFHQ 379 RRG I S++ + + L SS TVH+F R+ +++ P GPA + Sbjct: 229 FRRGTVPTSIYSMSFNLSSTLLCVSSTSDTVHIF--RLLNTQKNANALPGG--GPAQGTR 284 Query: 380 NSSSSL-DPLISPNTGANPNS 439 + S + DP SP+ G P++ Sbjct: 285 SRSFDVNDP--SPHKGEVPSA 303 >gi|7673610|gb|AAF66949.1|AF229635_1 (AF229635) DXImx38e protein [Mus musculus] Length = 346 Frame 2 hits (HSPs): ____________________ __________________________________________________ Database sequence: | | | | 346 0 150 300 Plus Strand HSPs: Score = 151 (53.2 bits), Expect = 3.1e-09, P = 3.1e-09 Identities = 51/135 (37%), Positives = 74/135 (54%), Frame = +2 Query: 71 INAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIALSP 250 INAH S +AC +L G ++A+AS KGTLIR+F+T +L E+RRG D A + Sbjct: 188 INAHQSDVACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPATLYC----- 242 Query: 251 NVQWLAASSDKGTVHVFSLR-VRVFGEDSVTQPNAVQGPALF-HQNSSSSLDPLISP--- 415 DKGTVH+F+L+ R+ ++ + V GP + + +S SL P Sbjct: 243 ---------DKGTVHIFALKDTRLNRRSALARVGKV-GPMIGQYVDSQWSLASFTVPAES 292 Query: 416 --------NTGANPNSSLSF-MRGVLPKY 475 NT N NS ++ + G KY Sbjct: 293 ACICAFGRNTSKNVNSVIAICVDGTFHKY 321 >gi|7269952|emb|CAB79769.1| (AL161577) putative protein [Arabidopsis thaliana] Length = 285 Frame 2 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | | | | 285 0 50 100 150 200 250 Plus Strand HSPs: Score = 146 (51.4 bits), Expect = 6.6e-09, P = 6.6e-09 Identities = 46/129 (35%), Positives = 71/129 (55%), Frame = +2 Query: 11 AGLHKGQVRVEH-FGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGS 187 A KG V V + L I+AH S +A L+ +G+ +AT S +GTLIR+ + + Sbjct: 89 ASTTKGSVLVYNVMDLQSHSEIDAHRSPLAAIALSSNGMYIATGSEQGTLIRVHLVSEAT 148 Query: 188 RLQEVRRGVDRAEINSIALSPNVQW---LAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQ 358 + RRG + I S++ P+ Q L A+S G++H FSL + + SV+ +A+ Sbjct: 149 KSYSFRRGTYPSTIYSLSFGPSTQLPDILIATSSSGSIHAFSLSLAI--NQSVS--DALD 204 Query: 359 GPALFH--QNSSSS 394 PA H QN+ SS Sbjct: 205 -PAHHHVLQNAVSS 217 >gi|6325157 ref|NP_015225.1| Ypl100wp [Saccharomyces cerevisiae] >gi|2132187|pir||S61966 hypothetical protein YPL100w - yeast (Saccharomyces cerevisiae) >gi|1151226|gb|AAB68199.1| (U43281) Lpg8p [Saccharomyces cerevisiae] Length = 496 Frame 2 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | | 496 0 150 300 450 Plus Strand HSPs: Score = 139 (48.9 bits), Expect = 1.3e-07, P = 1.3e-07 Identities = 50/147 (34%), Positives = 75/147 (51%), Frame = +2 Query: 53 LNVTKL--INA-HDSQIACFTLTLDGLLLATASVKGTLIRIFNT-MDG----SR--LQEV 202 LNVT + +N+ H +AC ++ DG LLATAS KGT+IR+F+T +D SR +E Sbjct: 283 LNVTPVNYLNSVHKGNVACLAVSHDGKLLATASDKGTIIRVFHTGVDSDYMSSRSLFKEF 342 Query: 203 RRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQGPALFHQN 382 RRG + +A ++ + D T+H+F L +S+ N+ G H N Sbjct: 343 RRGTRLCNLYQLAFDKSMTMIGCVGDTDTIHLFKLDD---ASNSLPGDNSSNG----HWN 395 Query: 383 SSSS-LDPLISPNTGANPNSSLSFMRGVLPKYFSSE 487 L +P+ G LS R + YFS + Sbjct: 396 EEEYILASNSNPSMGTPKEIPLSKPR--IANYFSKK 429 >gi|6226620|sp|Q94775|GBLP_TRYBB GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN (ACTIVATED PROTEIN KINASE C RECEPTOR HOMOLOG) (TRACK) >gi|2952301|gb|AAC05497.1| (AF049902) activated protein kinase C receptor homolog TRACK [Trypanosoma brucei rhodesiense] >gi|3776549|gb|AAC64858.1| (U72205) activated protein kinase C receptor homolog [Trypanosoma brucei] Length = 318 Frame 2 hits (HSPs): _____________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | | | 318 0 50 100 150 200 250 300 __________________ Annotated Domains: BLOCKS BL00678: Trp-Asp (WD) repeat proteins pr 84..94 Entrez Repetitive region: WD1. 11..44 Entrez Repetitive region: WD2. 65..95 Entrez Repetitive region: WD3. 107..137 Entrez Repetitive region: WD4. 150..182 Entrez Repetitive region: WD5. 194..224 Entrez Repetitive region: WD6. 235..264 Entrez Repetitive region: WD7. 282..315 PFAM WD40: WD domain, G-beta repeat 3..44 PFAM WD40: WD domain, G-beta repeat 57..95 PFAM WD40: WD domain, G-beta repeat 99..137 PFAM WD40: WD domain, G-beta repeat 140..175 PFAM WD40: WD domain, G-beta repeat 185..223 PFAM WD40: WD domain, G-beta repeat 227..263 PFAM WD40: WD domain, G-beta repeat 273..311 PRINTS GPROTEINBRPT1: G-protein beta repeat mot 82..96 PRINTS GPROTEINBRPT2: G-protein beta repeat mot 124..138 PRINTS GPROTEINBRPT3: G-protein beta repeat mot 210..224 PRODOM PD003109: GBLP(16) 5..60 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 63..95 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 105..137 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 151..182 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 192..224 PRODOM PD002398: GBLP(22) 228..267 PRODOM PD002496: GBLP(22) 270..315 PROSITE G_BETA_REPEATS: Beta-transducin family T 124..138 PROSITE G_BETA_REPEATS: Beta-transducin family T 169..183 PROSITE G_BETA_REPEATS: Beta-transducin family T 211..225 PROSITE G_BETA_REPEATS: Beta-transducin family T 82..96 __________________ Plus Strand HSPs: Score = 110 (38.7 bits), Expect = 0.0015, P = 0.0015 Identities = 29/86 (33%), Positives = 46/86 (53%), Frame = +2 Query: 50 GLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEI 229 G VT L H + + T++ DG L A++ G + R+++ G L E+ G A I Sbjct: 186 GRLVTDL-KGHTNYVTSVTVSPDGSLCASSDKDG-VARLWDLTKGEALSEMAAG---API 240 Query: 230 NSIALSPNVQWLAASSDKGTVHVFSL 307 N I SPN W+ A+++KG + +F L Sbjct: 241 NQICFSPNRYWMCAATEKG-IRIFDL 265 >gi|9280639|gb|AAF86508.1|AC002560_1 (AC002560) F21B7.1 [Arabidopsis thaliana] Length = 877 Frame 2 hits (HSPs): ____ ______ __________________________________________________ Database sequence: | | | | | | | 877 0 150 300 450 600 750 Plus Strand HSPs: Score = 90 (31.7 bits), Expect = 0.0076, Sum P(2) = 0.0075 Identities = 29/100 (29%), Positives = 43/100 (43%), Frame = +2 Query: 191 LQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQGPAL 370 L ++ RG+ A + I S QW+A S KGT H+F L G D+ QP + P Sbjct: 319 LFKLHRGITSAIVQDICFSQQSQWVAIISSKGTCHIFVLNSS--GSDAAFQPCEGEEPTR 376 Query: 371 FHQNSSS--SLDPLISPNTGANPNSSLSFMRGVLPKYFSSEW 490 +S L S +P ++++ KY S W Sbjct: 377 LPASSLPWWFTQSLSSNQQSLSPPTAVALSVVSRIKYSSFGW 418 Score = 62 (21.8 bits), Expect = 0.0076, Sum P(2) = 0.0075 Identities = 20/52 (38%), Positives = 25/52 (48%), Frame = +2 Query: 26 GQVRVEHF--GLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTM 178 G V V+ G V++ AH S I+ G LL TASV G I +F M Sbjct: 246 GMVAVKDLVSGALVSQF-KAHTSPISALCFDPSGTLLVTASVCGNNINVFQIM 297 >gi|3859572|gb|AAC72849.1| (AF100286) activated protein kinase C receptor homolog [Trypanosoma congolense] Length = 318 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | | | 318 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 104 (36.6 bits), Expect = 0.010, P = 0.010 Identities = 28/86 (32%), Positives = 45/86 (52%), Frame = +2 Query: 50 GLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEI 229 G VT L H + + T++ DG L A++ G + R+++ G L E+ G A I Sbjct: 186 GRLVTDL-KGHTNYVTSVTVSPDGSLCASSDKDG-VARLWDLTKGESLSEMAAG---API 240 Query: 230 NSIALSPNVQWLAASSDKGTVHVFSL 307 N I SPN W+ A+++K + +F L Sbjct: 241 NQICFSPNRYWMCAATEK-VIRIFDL 265 >gi|3025125|sp|P74598|YE91_SYNY3 HYPOTHETICAL WD-REPEAT PROTEIN SLL1491 >gi|7446135|pir||S76794 hypothetical protein - Synechocystis sp. (strain PCC 6803) >gi|1653795|dbj|BAA18706.1| (D90916) beta transducin-like protein [Synechocystis sp.] Length = 348 Frame 2 hits (HSPs): _______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 348 0 150 300 __________________ Annotated Domains: BLOCKS BL00678: Trp-Asp (WD) repeat proteins pr 331..341 PFAM WD40: WD domain, G-beta repeat 51..89 PFAM WD40: WD domain, G-beta repeat 134..173 PFAM WD40: WD domain, G-beta repeat 177..217 PFAM WD40: WD domain, G-beta repeat 221..258 PFAM WD40: WD domain, G-beta repeat 262..300 PFAM WD40: WD domain, G-beta repeat 304..342 PRINTS GPROTEINBRPT1: G-protein beta repeat mot 160..174 PRINTS GPROTEINBRPT2: G-protein beta repeat mot 204..218 PRINTS GPROTEINBRPT3: G-protein beta repeat mot 329..343 PRODOM PD084419: YE91_SYNY3 1..137 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 139..171 PRODOM PD064243: YE91_SYNY3 173..307 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 309..342 PROSITE G_BETA_REPEATS: Beta-transducin family T 204..218 PROSITE G_BETA_REPEATS: Beta-transducin family T 329..343 __________________ Plus Strand HSPs: Score = 104 (36.6 bits), Expect = 0.012, P = 0.012 Identities = 33/94 (35%), Positives = 52/94 (55%), Frame = +2 Query: 26 GQVR-VEHFGLNVTKLINAHDSQ---IACFTLTLDGLLLATASVKGTLIRIFNTMDGSRL 193 GQ R ++ + N +L+ Q I +T DG L A V+ ++ +N D L Sbjct: 208 GQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLVGA-VRN-FVKAWNLADAKEL 265 Query: 194 QEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSL 307 VR G EIN+IA+SPN +W+A ++ +GT+ +F L Sbjct: 266 FSVR-GPS-LEINTIAVSPNNRWVATANKEGTIMIFDL 301 >gi|3859574|gb|AAC72850.1| (AF100287) activated protein kinase C receptor homolog [Trypanosoma vivax] Length = 317 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | | | 317 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 100 (35.2 bits), Expect = 0.033, P = 0.032 Identities = 25/83 (30%), Positives = 43/83 (51%), Frame = +2 Query: 59 VTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSI 238 V + H + + T++ DG L A++ G + R+++ G L E+ G A IN I Sbjct: 189 VVSELKGHTNYVTSVTVSPDGSLCASSDCDG-VARLWDLAKGDSLFEMSAG---APINQI 244 Query: 239 ALSPNVQWLAASSDKGTVHVFSL 307 SPN W+ A++D+ + +F L Sbjct: 245 CFSPNRYWMCAATDE-CIRIFDL 266 >gi|3776567|gb|AAC64884.1| (AC005388) Strong similarity to F21B7.33 gi|2809264 from A. thaliana BAC gb|AC002560. EST gb|N65119 comes from this gene. [Arabidopsis thaliana] Length = 942 Frame 2 hits (HSPs): ________ __________________________________________________ Database sequence: | | | | | | | | 942 0 150 300 450 600 750 900 Plus Strand HSPs: Score = 80 (28.2 bits), Expect = 0.095, Sum P(2) = 0.090 Identities = 22/60 (36%), Positives = 31/60 (51%), Frame = +2 Query: 191 LQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVTQPNAVQ--GP 364 L ++ RG+ A I I S QW+A S K T H++ L FG ++V + Q GP Sbjct: 434 LYKLHRGMTSAVIQDICFSSYSQWIAIVSSKSTCHIYVLSP--FGGENVLEIRNSQFDGP 491 Query: 365 AL 370 L Sbjct: 492 TL 493 Score = 64 (22.5 bits), Expect = 0.095, Sum P(2) = 0.090 Identities = 18/52 (34%), Positives = 23/52 (44%), Frame = +2 Query: 26 GQVRVEHFGLN-VTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTM 178 G V V+ F + AH S I+ G LL TAS+ G I +F M Sbjct: 361 GTVIVKDFESRAIIAQFRAHTSPISALCFDPSGTLLVTASIHGNNINVFRIM 412 >gi|6323763 ref|NP_013834.1| G-beta like protein; Asc1p [Saccharomyces cerevisiae] >gi|1730231|sp|P38011|GBLP_YEAST GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN >gi|1084938|pir||S54578 hypothetical protein YMR116c - yeast (Saccharomyces cerevisiae) >gi|817876|emb|CAA89754.1| (Z49702) unknown [Saccharomyces cerevisiae] Length = 319 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | | | 319 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 95 (33.4 bits), Expect = 0.14, P = 0.13 Identities = 28/84 (33%), Positives = 45/84 (53%), Frame = +2 Query: 80 HDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIALSPNVQ 259 H+S I T + DG L+A+A G ++ ++N + + D E+ S+A SPN Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIM-LWN-LAAKKAMYTLSAQD--EVFSLAFSPNRY 250 Query: 260 WLAASSDKGTVHVFSLRVRVFGED 331 WLAA++ G + VFSL + +D Sbjct: 251 WLAAATATG-IKVFSLDPQYLVDD 273 >gi|10176800|dbj|BAB09939.1| (AB022214) contains similarity to unknown protein~gb|AAC64884.1~gene_id:K5F14.9 [Arabidopsis thaliana] Length = 763 Frame 2 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | || 763 0 150 300 450 600 750 Plus Strand HSPs: Score = 98 (34.5 bits), Expect = 0.20, P = 0.18 Identities = 32/106 (30%), Positives = 46/106 (43%), Frame = +2 Query: 56 NVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFN---TMDGSR---------LQE 199 +V AH S I+ GLLL TAS++G I +F T+ SR L Sbjct: 338 SVITQFKAHKSPISALCFDQSGLLLVTASIQGHNINVFRIMPTISTSRAVKTTTFAHLFR 397 Query: 200 VRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSV 337 ++RG A I I S + + S +GT H+F + G+ V Sbjct: 398 LQRGFTNAVIQDICFSKDSNLIVVGSSRGTSHLFEINPEKEGDAPV 443 >gi|3023853|sp|Q10281|GBLP_SCHPO GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN >gi|7490617|pir||T39022 guanine nucleotide-binding protein beta subunit-like protein - fission yeast (Schizosaccharomyces pombe) >gi|11346446|pir||T43299 probable GTP-binding regulatory protein beta chain - fission yeast (Schizosaccharomyces pombe) >gi|2440194|emb|CAB11079.1| (Z98531) guanine nucleotide-binding protein beta subunit-like protein [Schizosaccharomyces pombe] Length = 314 Frame 2 hits (HSPs): ______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | | | 314 0 50 100 150 200 250 300 __________________ Annotated Domains: BLOCKS BL00678: Trp-Asp (WD) repeat proteins pr 122..132 Entrez Repetitive region: WD1. 13..44 Entrez Repetitive region: WD2. 61..91 Entrez Repetitive region: WD3. 103..133 Entrez Repetitive region: WD4. 146..178 Entrez Repetitive region: WD5. 190..220 Entrez Repetitive region: WD6. 231..260 Entrez Repetitive region: WD7. 281..311 PFAM WD40: WD domain, G-beta repeat 5..44 PFAM WD40: WD domain, G-beta repeat 53..91 PFAM WD40: WD domain, G-beta repeat 95..133 PFAM WD40: WD domain, G-beta repeat 138..178 PFAM WD40: WD domain, G-beta repeat 182..220 PFAM WD40: WD domain, G-beta repeat 224..260 PFAM WD40: WD domain, G-beta repeat 274..311 PRINTS GPROTEINBRPT1: G-protein beta repeat mot 78..92 PRINTS GPROTEINBRPT2: G-protein beta repeat mot 120..134 PRINTS GPROTEINBRPT3: G-protein beta repeat mot 207..221 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 10..44 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 59..91 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 101..133 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 146..178 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 190..220 PRODOM PD002398: GBLP(22) 226..265 PRODOM PD002496: GBLP(22) 267..312 PROSITE G_BETA_REPEATS: Beta-transducin family T 120..134 PROSITE G_BETA_REPEATS: Beta-transducin family T 207..221 PROSITE G_BETA_REPEATS: Beta-transducin family T 31..45 PROSITE G_BETA_REPEATS: Beta-transducin family T 78..92 __________________ Plus Strand HSPs: Score = 92 (32.4 bits), Expect = 0.32, P = 0.28 Identities = 24/93 (25%), Positives = 47/93 (50%), Frame = +2 Query: 38 VEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVD 217 +E F L + H ++ T++ DG L A+ GTL+ +++ + + L + Sbjct: 179 LETFSLRTSHY--GHTGYVSAVTISPDGSLCASGGRDGTLM-LWDLNESTHLYSLEA--- 232 Query: 218 RAEINSIALSPNVQWLAASSDKGTVHVFSLRVR 316 +A IN++ SPN WL A++ ++ +F L + Sbjct: 233 KANINALVFSPNRYWLCAATGS-SIRIFDLETQ 264 >gi|11992988|gb|AAA56865.2| (L37885) guanine nucleotide regulatory protein [Schizosaccharomyces pombe] Length = 314 Frame 2 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | | | | | 314 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 92 (32.4 bits), Expect = 0.32, P = 0.28 Identities = 24/93 (25%), Positives = 47/93 (50%), Frame = +2 Query: 38 VEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVD 217 +E F L + H ++ T++ DG L A+ GTL+ +++ + + L + Sbjct: 179 LETFSLRTSHY--GHTGYVSAVTISPDGSLCASGGRDGTLM-LWDLNESTHLYSLEA--- 232 Query: 218 RAEINSIALSPNVQWLAASSDKGTVHVFSLRVR 316 +A IN++ SPN WL A++ ++ +F L + Sbjct: 233 KANINALVFSPNRYWLCAATGS-SIRIFDLETQ 264 >gi|10434795|dbj|BAB14380.1| (AK023054) unnamed protein product [Homo sapiens] Length = 684 Frame 2 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 684 0 150 300 450 600 Plus Strand HSPs: Score = 95 (33.4 bits), Expect = 0.42, P = 0.34 Identities = 23/86 (26%), Positives = 38/86 (44%), Frame = +2 Query: 77 AHDSQIACFTLTLDGLLLATASVKGTLIRIFNTM----DGSR-----LQEVRRGVDRAEI 229 AH+ + C G+LL T G +F + S+ L + RG A++ Sbjct: 120 AHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKV 179 Query: 230 NSIALSPNVQWLAASSDKGTVHVFSL 307 I S + +W+ S+ +GT HVF + Sbjct: 180 QDICFSHDCRWVVVSTLRGTSHVFPI 205 >gi|7490155|pir||T40283 beta-transducin - fission yeast (Schizosaccharomyces pombe) >gi|2950453|emb|CAA17803.1| (AL022071) WD repeat protein [Schizosaccharomyces pombe] Length = 380 Frame 2 hits (HSPs): __________________ __________________________________________________ Database sequence: | | | | 380 0 150 300 Plus Strand HSPs: Score = 92 (32.4 bits), Expect = 0.44, P = 0.35 Identities = 31/130 (23%), Positives = 67/130 (51%), Frame = +2 Query: 65 KLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIAL 244 +++ AH I +++ DG L ATAS G + RI++ + G L+ + ++ ++++ Sbjct: 174 RMLPAHSEPIISVSISADGTLCATASYDG-MARIWDVLSGQCLKTLVEPIN-VPLSNLQF 231 Query: 245 SPNVQWLAASSDKGTVHVFSLR----VRVFGEDSVTQPNAVQGPALFHQNSSSSLDPLIS 412 + N ++L S+ + ++ R VR+F + V ++ +N + + L Sbjct: 232 TENRKYLLVSNLNSQIRLWDYRRNRVVRIF-DSHVNTRYSMSWDCYSSKNIPKNTEAL-- 288 Query: 413 PNTGAN-PNSSLSFM 454 PN ++ P+ + SFM Sbjct: 289 PNNDSSYPDDAESFM 303 >gi|3024893|sp|P74442|Y143_SYNY3 HYPOTHETICAL WD-REPEAT PROTEIN SLR0143 >gi|7446131|pir||S76414 beta transducin-like protein, 132K - Synechocystis sp. (strain PCC 6803) >gi|1653631|dbj|BAA18543.1| (D90915) beta transducin-like protein [Synechocystis sp.] Length = 1191 Frame 2 hits (HSPs): _____ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | | | | 1191 0 150 300 450 600 750 900 1050 __________________ Annotated Domains: BLOCKS BL00678: Trp-Asp (WD) repeat proteins pr 618..628 Entrez Repetitive region: WD1. 558..588 Entrez Repetitive region: WD2. 599..629 Entrez Repetitive region: WD3. 640..670 Entrez Repetitive region: WD4. 682..712 Entrez Repetitive region: WD5. 723..753 Entrez Repetitive region: WD6. 764..794 Entrez Repetitive region: WD7. 805..835 Entrez Repetitive region: WD8. 995..1025 Entrez Repetitive region: WD9. 1036..1066 Entrez Repetitive region: WD10. 1077..1107 Entrez Repetitive region: WD11. 1118..1148 PFAM WD40: WD domain, G-beta repeat 550..588 PFAM WD40: WD domain, G-beta repeat 591..629 PFAM WD40: WD domain, G-beta repeat 632..670 PFAM WD40: WD domain, G-beta repeat 674..712 PFAM WD40: WD domain, G-beta repeat 715..753 PFAM WD40: WD domain, G-beta repeat 756..794 PFAM WD40: WD domain, G-beta repeat 797..835 PFAM WD40: WD domain, G-beta repeat 987..1025 PFAM WD40: WD domain, G-beta repeat 1028..1066 PFAM WD40: WD domain, G-beta repeat 1069..1107 PRINTS GPROTEINBRPT1: G-protein beta repeat mot 575..589 PRINTS GPROTEINBRPT2: G-protein beta repeat mot 657..671 PRINTS GPROTEINBRPT3: G-protein beta repeat mot 699..713 PRODOM PD042861: P73552(1) Y143(1) 17..369 PRODOM PD141840: Y143_SYNY3 371..554 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 556..586 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 597..629 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 637..668 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 682..712 PRODOM PD000061: PEX7(6) WD66(5) CORO(5) 731..795 PRODOM PD036333: Q50236(1) Y143(1) 799..1033 PRODOM PD000061: PEX7(6) WD66(5) CORO(5) 1035..1106 PRODOM PD029268: Q50237(1) Y143(1) 1108..1190 __________________ Plus Strand HSPs: Score = 97 (34.1 bits), Expect = 0.45, P = 0.36 Identities = 29/110 (26%), Positives = 59/110 (53%), Frame = +2 Query: 11 AGLHKGQVRVEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSR 190 AG +G + + +F + + I AH ++ + +G L +A +GT +I++ ++G Sbjct: 1014 AGDEQGNLTLWNFDGTLIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTA-KIWS-VEGQL 1071 Query: 191 LQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLRVRVFGEDSVT 340 L ++ D I+ IA+SP+ QW+A ++ G V ++ + + GE + T Sbjct: 1072 LHTLKS--DPLPIDQIAISPDSQWIATAASDGMVRLWDQQGNLRGEFTST 1119 >gi|10438048|dbj|BAB15156.1| (AK025510) unnamed protein product [Homo sapiens] Length = 928 Frame 2 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | | 928 0 150 300 450 600 750 900 Plus Strand HSPs: Score = 95 (33.4 bits), Expect = 0.60, P = 0.45 Identities = 23/86 (26%), Positives = 38/86 (44%), Frame = +2 Query: 77 AHDSQIACFTLTLDGLLLATASVKGTLIRIFNTM----DGSR-----LQEVRRGVDRAEI 229 AH+ + C G+LL T G +F + S+ L + RG A++ Sbjct: 349 AHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKV 408 Query: 230 NSIALSPNVQWLAASSDKGTVHVFSL 307 I S + +W+ S+ +GT HVF + Sbjct: 409 QDICFSHDCRWVVVSTLRGTSHVFPI 434 >gi|11139244|gb|AAG31640.1|AF309554_1 (AF309554) meiotic recombination protein REC14 [Mus musculus] Length = 305 Frame 2 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | | | || 305 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.72, P = 0.51 Identities = 29/99 (29%), Positives = 50/99 (50%), Frame = +2 Query: 14 GLHKGQVRVEHFGLNVTKLINAHDSQ---IACFTLTLDGLLLATASVKGTLIRIFNTMDG 184 G H G+V + FG+ K + D++ I + DG LA+ ++ G +I IF+ G Sbjct: 124 GTHMGKVNI--FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATG 180 Query: 185 SRLQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLR 310 L + G I S+ SP+ Q L +SD G + ++ ++ Sbjct: 181 KLLHTLE-G-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220 >gi|10437122|dbj|BAB14986.1| (AK024754) unnamed protein product [Homo sapiens] >gi|11139242|gb|AAG31639.1|AF309553_1 (AF309553) meiotic recombination protein REC14 [Homo sapiens] Length = 305 Frame 2 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | | | || 305 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 88 (31.0 bits), Expect = 0.94, P = 0.61 Identities = 29/99 (29%), Positives = 50/99 (50%), Frame = +2 Query: 14 GLHKGQVRVEHFGLNVTKLINAHDSQ---IACFTLTLDGLLLATASVKGTLIRIFNTMDG 184 G H G+V + FG+ K + D++ I + DG LA+ ++ G +I IF+ G Sbjct: 124 GTHVGKVNI--FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATG 180 Query: 185 SRLQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSLR 310 L + G I S+ SP+ Q L +SD G + ++ ++ Sbjct: 181 KLLHTLE-G-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220 >gi|10764839|gb|AAG22830.1|AF306867_1 (AF306867) unknown [Aedes triseriatus] Length = 177 Frame 2 hits (HSPs): _____________________________ __________________________________________________ Database sequence: | | | | | 177 0 50 100 150 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 1.3, P = 0.72 Identities = 26/99 (26%), Positives = 51/99 (51%), Frame = +2 Query: 11 AGLHKGQVRVEHFGLNVTKLINAHDSQIACFTLTL----DGLLLATASVKGTLIRIFNTM 178 +G H+G++ + + + K D Q FTL++ DG +A+ + G +I IF+ Sbjct: 8 SGSHEGKISL--YSVESGKPEQVLDPQNGKFTLSIAYSPDGKYIASGGIDG-IINIFDVA 64 Query: 179 DGSRLQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSL 307 G ++ + G + S+ SP+ Q L +SD G + ++ + Sbjct: 65 AG-KVAQTLEG-HAMSVRSLCFSPDSQMLLTASDDGHMKLYDV 105 >gi|11346447|pir||T43158 probable GTP-binding protein beta chain - fission yeast (Schizosaccharomyces pombe) (fragment) >gi|1749702|dbj|BAA13908.1| (D89247) similar to Human guanine nucleotide-binding protein beta subunit-like protein, SWISS-PROT Accession Number P25388 [Schizosaccharomyces pombe] Length = 310 Frame 2 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | | | | | 310 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.3, P = 0.73 Identities = 23/93 (24%), Positives = 47/93 (50%), Frame = +2 Query: 38 VEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVD 217 +E F L + H ++ T++ DG L A+ GTL+ +++ + + L + Sbjct: 175 LETFSLRTSHY--GHTGYVSAVTISPDGSLCASGGRDGTLM-LWDLNESTHLYSLEA--- 228 Query: 218 RAEINSIALSPNVQWLAASSDKGTVHVFSLRVR 316 +A IN++ SP+ WL A++ ++ +F L + Sbjct: 229 KANINALVFSPDRYWLCAATGS-SIRIFDLETQ 260 >gi|4972734|gb|AAD34762.1| (AF132174) unknown [Drosophila melanogaster] >gi|7299285|gb|AAF54480.1| (AE003685) BcDNA:LD21537 gene product [Drosophila melanogaster] Length = 331 Frame 2 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 331 0 150 300 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.4, P = 0.76 Identities = 27/99 (27%), Positives = 53/99 (53%), Frame = +2 Query: 11 AGLHKGQVRVEHFGLNVTKLINAHDSQIACFTLTL----DGLLLATASVKGTLIRIFNTM 178 +GL+ G++ + + + K D+Q +TL++ DG +A+ ++ G +I IF+ Sbjct: 144 SGLNDGKISM--YSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDG-IITIFDVA 200 Query: 179 DGSRLQEVRRGVDRAEINSIALSPNVQWLAASSDKGTVHVFSL 307 G +Q + G + S+ SPN Q L +SD G + ++ + Sbjct: 201 AGKVVQTLE-G-HAMPVRSLCFSPNSQLLLTASDDGHMKLYDV 241 >gi|7292701|gb|AAF48098.1| (AE003487) CG1905 gene product [Drosophila melanogaster] Length = 2274 Frame 2 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | | 2274 0 500 1000 1500 2000 Plus Strand HSPs: Score = 95 (33.4 bits), Expect = 1.6, P = 0.80 Identities = 36/140 (25%), Positives = 60/140 (42%), Frame = +2 Query: 77 AHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMD---GSRLQEVR------RGVDRAEI 229 AH + G+LL TA +G +F G L V RG A++ Sbjct: 413 AHSEALVAMEFDSSGMLLLTADRRGHDFHVFRVQPHPVGPSLAAVHHLYVLHRGDTSAKV 472 Query: 230 NSIALSPNVQWLAASSDKGTVHVFSLRVR--VFGEDSVTQPNAVQGPALFHQNSSSSLDP 403 IA S + +W A S+ +GT HVF + G + T + V + FH+++ D Sbjct: 473 QHIAFSLDSRWAAVSTLRGTTHVFPITPYGGAMGVRTHTSLHVVNKLSRFHRSAGLGADG 532 Query: 404 LISPNTGANPNSSLSFMRGVLP 469 S + + + S +F++ + P Sbjct: 533 RSS--SPISHSESTTFVQSLQP 552 >gi|11139411|gb|AAG31685.1|AF125254_1 (AF125254) activated protein kinase C receptor LACK [Leishmania panamensis] Length = 312 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | | | 312 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 86 (30.3 bits), Expect = 1.7, P = 0.82 Identities = 23/81 (28%), Positives = 44/81 (54%), Frame = +2 Query: 65 KLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIAL 244 + + H + ++ T++ DG L A+ G + +++ G +L R V+ A IN IA Sbjct: 188 RTLKGHSNYVSTVTVSPDGSLCASGGKDGAAL-LWDLSTGEQL--FRINVESA-INQIAF 243 Query: 245 SPNVQWLAASSDKGTVHVFSL 307 SPN W+ +++K ++ V+ L Sbjct: 244 SPNRFWMCVAAEK-SLSVYDL 263 >gi|7492315|pir||T39922 pop3, a WD repeat protein - fission yeast (Schizosaccharomyces pombe) >gi|3434986|dbj|BAA32427.1| (AB016895) Pop3 [Schizosaccharomyces pombe] >gi|6018741|emb|CAB57925.1| (AL121794) pop3, a WD repeat protein [Schizosaccharomyces pombe] Length = 314 Frame 2 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | | | | | 314 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 86 (30.3 bits), Expect = 1.7, P = 0.82 Identities = 31/98 (31%), Positives = 46/98 (46%), Frame = +2 Query: 26 GQVRVEHFGLN--VTKLINAHDSQIACFTLTLDGLLLATASVKGTLI--RIFNTMDGSRL 193 G+VR G N +LI D ++ T+ DG +L + KG R+ N S L Sbjct: 146 GRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLIAGNNKGNCYVWRMLNHQGASLL 205 Query: 194 QEVRR-GVDRAEINSIALSPNVQWLAASSDKGTVHVFS 304 Q V + + I LSP+V+ LA S TV+++S Sbjct: 206 QPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIWS 243 >gi|7302720|gb|AAF57798.1| (AE003802) CG10931 gene product [Drosophila melanogaster] Length = 307 Frame 2 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | | | | | 307 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 85 (29.9 bits), Expect = 2.2, P = 0.89 Identities = 20/82 (24%), Positives = 44/82 (53%), Frame = +2 Query: 65 KLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIAL 244 K+++AH I DG + T+S G L+R++++ G L+ + VD + + Sbjct: 175 KIVHAHQDPITSVDFHRDGNIFVTSSYDG-LVRLWDSSTGHVLKTLV-DVDNIPVGYVKF 232 Query: 245 SPNVQWLAASSDKGTVHVFSLR 310 SPN +++ +S+ T+ +++ + Sbjct: 233 SPNGRYILSSTLNNTLRLWNYK 254 >gi|7303694|gb|AAF58744.1| (AE003828) CG12325 gene product [Drosophila melanogaster] Length = 949 Frame 2 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | | 949 0 150 300 450 600 750 900 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 3.2, P = 0.96 Identities = 28/93 (30%), Positives = 45/93 (48%), Frame = +2 Query: 80 HDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVDRAEINSIALSPNVQ 259 H S++ C + DG +AT + + ++++NT S V + + I S N + Sbjct: 392 HSSEMTCIAYSSDGQFIATGG-EDSKVKLWNTQ--SSFCFVTFSEHTSGVTGIQFSRNKK 448 Query: 260 WLAASSDKGTVHVFSL-RVRVFGEDSVTQPNAVQ 358 +L +SS GTV F + R R F + T PN Q Sbjct: 449 FLVSSSLDGTVRAFDVNRYRNFR--TFTSPNPAQ 480 >gi|1169867|sp|P46800|GBLP_DICDI GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN >gi|881422|gb|AAA70100.1| (U27537) G beta like protein [Dictyostelium discoideum] Length = 332 Frame 2 hits (HSPs): ____________ Annotated Domains: ________________________________________ ________ __________________________________________________ Database sequence: | | | | 332 0 150 300 __________________ Annotated Domains: BLOCKS BL00678: Trp-Asp (WD) repeat proteins pr 129..139 DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 9..55 DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 56..100 DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 101..142 DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 143..189 DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 190..231 DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 232..273 DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 282..332 Entrez Repetitive region: WD1. 19..50 Entrez Repetitive region: WD2. 68..98 Entrez Repetitive region: WD3. 110..140 Entrez Repetitive region: WD4. 154..187 Entrez Repetitive region: WD5. 199..229 Entrez Repetitive region: WD6. 240..269 Entrez Repetitive region: WD7. 298..328 PFAM WD40: WD domain, G-beta repeat 11..50 PFAM WD40: WD domain, G-beta repeat 60..98 PFAM WD40: WD domain, G-beta repeat 102..140 PFAM WD40: WD domain, G-beta repeat 146..187 PFAM WD40: WD domain, G-beta repeat 191..229 PFAM WD40: WD domain, G-beta repeat 233..269 PFAM WD40: WD domain, G-beta repeat 290..328 PRINTS GPROTEINBRPT1: G-protein beta repeat mot 85..99 PRINTS GPROTEINBRPT2: G-protein beta repeat mot 127..141 PRINTS GPROTEINBRPT3: G-protein beta repeat mot 174..188 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 16..50 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 65..98 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 108..139 PRODOM PD051743: GBLP_DICDI 141..194 PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 196..229 PRODOM PD002398: GBLP(22) 231..272 PRODOM PD002496: GBLP(22) 296..329 PROSITE G_BETA_REPEATS: Beta-transducin family T 127..141 PROSITE G_BETA_REPEATS: Beta-transducin family T 174..188 PROSITE G_BETA_REPEATS: Beta-transducin family T 216..230 PROSITE G_BETA_REPEATS: Beta-transducin family T 85..99 __________________ Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 3.3, P = 0.96 Identities = 24/81 (29%), Positives = 40/81 (49%), Frame = +2 Query: 38 VEHFGLNVTKLINAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRRGVD 217 ++ F N T + H + T++ DG L A+ K T ++ G L ++ Sbjct: 188 IKSFKCNHT--LTDHTGYVNTVTISPDGSLCASGG-KDTFACLWELSSGKPLYKLEA--- 241 Query: 218 RAEINSIALSPNVQWLAASSD 280 R IN++A SPN WL+A++D Sbjct: 242 RNTINALAFSPNKYWLSAATD 262 >gi|7293188|gb|AAF48571.1| (AE003501) katanin-80 gene product [Drosophila melanogaster] Length = 296 Frame 2 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | | | | 296 0 50 100 150 200 250 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.6, P = 0.97 Identities = 20/92 (21%), Positives = 47/92 (51%), Frame = +2 Query: 38 VEHFGLNVTKL---INAHDSQIACFTLTLDGLLLATASVKGTLIRIFNTMDGSRLQEVRR 208 + + LN K+ +N H + G + + S T +R+++ + + +V R Sbjct: 84 IRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGS-NDTTVRLWDVQNENNCIKVCR 142 Query: 209 GVDRAEINSIALSPNVQWLAASSDKGTVHVFSLR 310 G + +NS+ SP+ W+A++ +G++ ++ +R Sbjct: 143 G-HMSHVNSVKFSPDGLWIASAGLEGSILIWDIR 175 WARNING: HSPs involving 17 database sequences were not reported due to the limiting value of parameter B = 50. Parameters: filter=none matrix=BLOSUM62 V=50 B=50 E=10 gi H=1 sort_by_pvalue echofilter ctxfactor=5.97 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H Std. 0 BLOSUM62 0.318 0.135 0.401 +3 0 BLOSUM62 0.318 0.135 0.401 0.378 0.171 0.631 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +2 0 BLOSUM62 0.318 0.135 0.401 0.322 0.135 0.394 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +1 0 BLOSUM62 0.318 0.135 0.401 0.353 0.152 0.575 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -1 0 BLOSUM62 0.318 0.135 0.401 0.356 0.157 0.557 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -2 0 BLOSUM62 0.318 0.135 0.401 0.357 0.154 0.574 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -3 0 BLOSUM62 0.318 0.135 0.401 0.345 0.152 0.489 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +3 0 169 168 10. 75 3 12 22 0.11 34 31 0.11 37 +2 0 169 168 10. 75 3 12 22 0.11 34 31 0.11 37 +1 0 169 168 10. 75 3 12 22 0.11 34 31 0.11 37 -1 0 169 169 10. 75 3 12 22 0.11 34 31 0.11 37 -2 0 169 168 10. 75 3 12 22 0.11 34 31 0.11 37 -3 0 169 168 10. 75 3 12 22 0.11 34 31 0.11 37 Statistics: Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr Title: nr Release date: unknown Posted date: 4:06 PM CST Feb 28, 2001 Format: BLAST # of letters in database: 197,782,623 # of sequences in database: 625,274 # of database sequences satisfying E: 67 No. of states in DFA: 595 (59 KB) Total size of DFA: 197 KB (256 KB) Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00 No. of threads or processors used: 6 Search cpu time: 157.28u 1.12s 158.40t Elapsed: 00:00:27 Total cpu time: 157.32u 1.19s 158.51t Elapsed: 00:00:27 Start: Sat Feb 2 00:44:51 2002 End: Sat Feb 2 00:45:18 2002 WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000