Interim Symbol

Repin1provided by RGD

Interim Full Name

replication initiator 1provided by RGD

Primary source

RGD:1549707

See related

Ensembl:ENSRNOG00000008239

Gene type

protein coding

RefSeq status

PROVISIONAL

Organism

Rattus norvegicus

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus

Also known as

Repin1; Ap4; Ap-4

Go to reference sequence detailsTry our new Sequence Viewer

chromosome: 4; Location: 4q24See Repin1 in MapViewer

Related Articles in PubMed

GeneRIFs: Gene References Into FunctionWhat's a GeneRIF?

	1.	The functional unknown gene, Repin1, may be a novel candidate gene for the development of facets of the metabolic syndrome.
	2.	It is concluded that the triplet repeat expansion in 3'-UTR of Repin1 leads to metabolic disorders as found in hHTG and WOKW rats and that Repin1 could be a novel candidate gene in the development of metabolic disorders.
	3.	findings show that glutamate receptor delta2 interacted directly with AP-4; results suggest a potential involvement of AP-4 in the trafficking of delta2 in the brain.

Homology

GeneOntology Provided by RGD

Preferred Names

replication initiator 1

Names

replication initiator 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001005893.1→NP_001005893.1 replication initiator 1

   Source sequence(s)

   AY691175

   UniProtKB/Swiss-Prot

   Q68H95

   Conserved Domains (2) summary

   COG5048
   Location:250–509
   Blast Score:138
   Location:74–308
   Blast Score:85

   COG5048; FOG: Zn-finger [General function prediction only]

RefSeqs of Annotated Genomes: Build 4.1

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference assembly

Genomic

1. NC_005103.2 Reference assembly

   Range

   76686298..76690141

   Download

   GenBank  FASTA Sequence Viewer (Graphics)

Reference assembly (based on RGSC v3.4)

Genomic

1. NW_047691.1 Reference assembly (based on RGSC v3.4)

   Range

   794073..797916

   Download

   GenBank  FASTA Sequence Viewer (Graphics)

Alternate assembly (based on Celera assembly)

Genomic

1. AC_000072.1 Alternate assembly (based on Celera assembly)

   Range

   72486831..72490674

   Download

   GenBank  FASTA Sequence Viewer (Graphics)

2. NW_001084828.1

   Range

   757062..760905

   Download

   GenBank  FASTA Sequence Viewer (Graphics)

• UCSC UCSC
• UniGene Rn.204397