Vibrio vulnificus CMCP6 chromosome I

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189733-189832 (1-100) 189833-189932 (101-200) 189933-190032 (201-300) 190033-190132 (301-400) 190133-190232 (401-500)
[190233-190332 (501-600)] 190333-190432 (601-700) 190433-190532 (701-800) 190533-190632 (801-900) 190633-190732 (901-1000)
190733-190832 (1001-1100) 190833-190932 (1101-1200) 190933-191032 (1201-1300) 191033-191132 (1301-1400) 191133-191232 (1401-1500)
191233-191332 (1501-1600) 191333-191432 (1601-1700) 191433-191532 (1701-1800) 191533-191632 (1801-1900) 191633-191732 (1901-2000)
191733-191832 (2001-2100) 191833-191932 (2101-2200) 191933-192032 (2201-2300) 192033-192132 (2301-2400) 192133-192232 (2401-2500)
192233-192332 (2501-2600) 192333-192432 (2601-2700) 192433-192532 (2701-2800) 192533-192632 (2801-2900) 192633-192658 (2901-2926)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190233 hypothetical VV10534 Superfamily II DNA and RNA helicase
COG0513
genbank 27363997 NP_759525.1 408 535282 536508
190234 hypothetical VV10535 hypothetical protein
COG3022
genbank 27363998 NP_759526.1 258 536581 537357
190235 hypothetical VV10536 Na+/alanine symporter
COG1115
genbank 27363999 NP_759527.1 476 537462 538892
190236 hypothetical VV10538 hypothetical protein genbank 27364000 NP_759528.1 74 539565 539789
190237 hypothetical VV10539 hypothetical protein
COG3945
genbank 27364001 NP_759529.1 183 539867 540418
190238 hypothetical VV10540 uracil-DNA glycosylase
Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
genbank 27364002 NP_759530.1 226 540530 541210
190239 hypothetical VV10541 endonuclease IV
Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sites to produce new 5' ends that are base-free deoxyribose 5-phosphate residues
genbank 27364003 NP_759531.1 293 541512 542393
190240 hypothetical VV10542 Acid-induced glycyl radical enzyme
COG3445
genbank 27364004 NP_759532.1 125 542718 543095
190241 hypothetical VV10543 threonine synthase
catalyzes the formation of L-threonine fromO-phospho-L-homoserine
genbank 27364005 NP_759533.1 426 543218 544498
190242 hypothetical VV10544 homoserine kinase
catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
genbank 27364006 NP_759534.1 318 544495 545451
190243 thrA hypothetical VV10545 bifunctional aspartokinase I/homeserine dehydrogenase I
aspartokinase; COG0527; multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
genbank 27364007 NP_759535.1 819 545470 547929
190244 hypothetical VV10546 hypothetical protein genbank 27364008 NP_759536.1 154 548401 548865
190245 hypothetical VV10547 ribonuclease activity regulator protein RraA
regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
genbank 27364009 NP_759537.1 160 548862 549344
190246 hypothetical VV10548 Aerobic respiration control protein FexA
COG0745
genbank 27364010 NP_759538.1 238 550174 550890
190247 hypothetical VV10549 hypothetical protein genbank 27364011 NP_759539.1 149 550963 551412
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190248 hypothetical VV10550 Sensor histidine kinase FexB
COG0642
genbank 27364012 NP_759540.1 780 551417 553759
190249 hypothetical VV10551 GGDEF domain protein
COG2199
genbank 27364013 NP_759541.1 591 553990 555765
190250 hypothetical VV10552 Predicted Fe-S oxidoreductase
COG1242
genbank 27364014 NP_759542.1 318 555807 556763
190251 hypothetical VV10553 Glutamate synthase, large subunit
COG0067
genbank 27364015 NP_759543.1 1512 557313 561851
190252 hypothetical VV10554 Glutamate synthase, small subunit
COG0493
genbank 27364016 NP_759544.1 489 561851 563320
190253 hypothetical VV10555 Glutamate synthase, large subunit
other COG candidate exists; COG0069
genbank 27364017 NP_759545.1 1487 563750 568213
190254 hypothetical VV10556 Glutamate synthase, small subunit
COG0493
genbank 27364018 NP_759546.1 472 568226 569644
190255 hypothetical VV10557 hypothetical protein
COG4446
genbank 27364019 NP_759547.1 142 569757 570185
190256 hypothetical VV10558 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
genbank 27364020 NP_759548.1 231 570282 570977
190257 hypothetical VV10559 adenosylcobinamide-phosphate synthase
catalyzes the formation of adenosylcobinamide-phosphate from adenosylcobyric acid
genbank 27364021 NP_759549.1 317 570989 571942
190258 hypothetical VV10560 ABC-type Fe3+-hydroxamate transport system, periplasmic component
COG0614
genbank 27364022 NP_759550.1 273 571939 572760
190259 hypothetical VV10561 Predicted membrane protein
COG2860
genbank 27364023 NP_759551.1 206 572832 573452
190260 hypothetical VV10562 Transcriptional regulator
LysR family; COG0583
genbank 27364024 NP_759552.1 281 573565 574410
190261 hypothetical VV10563 Predicted permease
COG0730
genbank 27364025 NP_759553.1 262 574361 575149
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190262 hypothetical VV10564 Chromosome segregation ATPase
COG1196
genbank 27364026 NP_759554.1 134 575658 576062
190263 carB hypothetical VV10565 carbamoyl-phosphate synthase large subunit
composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate; binds manganese; involved in pyrimidine synthesis
genbank 27364027 NP_759555.1 1077 576181 579414
190264 hypothetical VV10566 carbamoyl-phosphate synthase small subunit
Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate
genbank 27364028 NP_759556.1 379 579431 580570
190265 hypothetical VV10567 dihydrodipicolinate reductase
catalyzes the formation of 2,3-dihydropicolinate from 2,3,4,5-tetrahydrodipicolinate
genbank 27364029 NP_759557.1 269 581052 581861
190266 hypothetical VV10568 NTP pyrophosphohydrolase
similar to oxidative damage repair enzymes; COG0494
genbank 27364030 NP_759558.1 133 581954 582355
190267 hypothetical VV10569 translocase
ATPase, RNA helicase; COG0653
genbank 27364031 NP_759559.1 907 582418 585141
190268 hypothetical VV10570 hypothetical protein
COG4701
genbank 27364032 NP_759560.1 152 585473 585931
190269 hypothetical VV10571 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
catalyzes the formation of UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine from UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine in lipid A biosynthesis
genbank 27364033 NP_759561.1 305 586005 586922
190270 hypothetical VV10572 cell division protein FtsZ
GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
genbank 27364034 NP_759562.1 333 587021 588022
190271 hypothetical VV10573 Cell division protein FtsZ
COG0206
genbank 27364035 NP_759563.1 50 587997 588149
190272 ftsA hypothetical VV10574 cell division protein
essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane
genbank 27364036 NP_759564.1 433 588228 589529
190273 hypothetical VV10575 Cell division protein FtsQ
COG1589
genbank 27364037 NP_759565.1 209 589540 590169
190274 hypothetical VV10577 UDP-N-acetylmuramate--L-alanine ligase
catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
genbank 27364038 NP_759566.1 486 590499 591959
190275 murG hypothetical VV10578 N-acetylglucosaminyl transferase
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
genbank 27364039 NP_759567.1 348 591973 593019
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190276 hypothetical VV10579 Cell division protein FtsW
COG0772
genbank 27364040 NP_759568.1 397 593027 594220
190277 murD hypothetical VV10580 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
genbank 27364041 NP_759569.1 442 594265 595593
190278 hypothetical VV10581 phospho-N-acetylmuramoyl-pentapeptide- transferase
catalyzes the binding of UDP-N-acetylmuramoyl (pentapeptide) to bactoprenol to produce lipid I in peptidoglycan synthesis
genbank 27364042 NP_759570.1 360 595627 596709
190279 hypothetical VV10582 UDP-N-acetylmuramyl pentapeptide synthase
COG0770
genbank 27364043 NP_759571.1 453 596706 598067
190280 murE hypothetical VV10583 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
genbank 27364044 NP_759572.1 502 598064 599572
190281 hypothetical VV10584 Cell division protein FtsI
COG0768; penicillin-binding protein 2
genbank 27364045 NP_759573.1 575 599577 601304
190282 hypothetical VV10585 Cell division protein FtsL
COG3116
genbank 27364046 NP_759574.1 105 601304 601621
190283 mraW hypothetical VV10586 S-adenosyl-methyltransferase
COG0275
genbank 27364047 NP_759575.1 316 601631 602581
190284 hypothetical VV10587 hypothetical protein genbank 27364048 NP_759576.1 116 602884 603234
190285 hypothetical VV10588 Predicted methyltransferase
COG0313
genbank 27364049 NP_759577.1 287 603304 604167
190286 hypothetical VV10589 Putative lipoprotein
COG3107
genbank 27364050 NP_759578.1 603 604236 606047
190287 hypothetical VV10590 hypothetical protein
similar to to archaeal Holliday junction resolvase; COG0792
genbank 27364051 NP_759579.1 122 606034 606402
190288 hypothetical VV10591 Phosphoheptose isomerase
COG0279
genbank 27364052 NP_759580.1 196 606406 606996
190289 hypothetical VV10592 Predicted periplasmic or secreted lipoprotein
COG2823
genbank 27364053 NP_759581.1 197 606999 607592
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190290 hypothetical VV10593 Stringent starvation protein B
COG2969
genbank 27364054 NP_759582.1 158 607669 608145
190291 sspA hypothetical VV10594 stringent starvation protein A
transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation
genbank 27364055 NP_759583.1 211 608149 608784
190292 hypothetical VV10595 Ubiquinol-cytochrome c reductase, cytochrome c1
COG2857
genbank 27364056 NP_759584.1 245 608882 609619
190293 hypothetical VV10596 Ubiquinol-cytochrome c reductase, cytochrome B
COG1290
genbank 27364057 NP_759585.1 421 609616 610881
190294 hypothetical VV10597 Ubiquinol-cytochrome c reductase, iron-sulfur subunit
COG0723
genbank 27364058 NP_759586.1 196 610881 611471
190295 hypothetical VV10598 30S ribosomal protein S9
Forms a direct contact with the tRNA during translation
genbank 27364059 NP_759587.1 130 611802 612194
190296 hypothetical VV10599 50S ribosomal protein L13
L13 is associated with the antitermination complex
genbank 27364060 NP_759588.1 142 612210 612638
190297 hypothetical VV10600 Predicted ATPase
COG1485
genbank 27364061 NP_759589.1 367 612890 613993
190298 hypothetical VV10601 hypothetical protein
COG3105
genbank 27364062 NP_759590.1 146 614162 614602
190299 hypothetical VV10603 Protease DO
COG0265
genbank 27364063 NP_759591.1 445 614789 616126
190300 hypothetical VV10604 Protease DegS
COG0265
genbank 27364064 NP_759592.1 350 616273 617325
190301 hypothetical VV10605 DNA topoisomerase IV subunit A
decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
genbank 27364065 NP_759593.1 761 617401 619686
190302 hypothetical VV10606 DNA topoisomerase IV subunit B
decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
genbank 27364066 NP_759594.1 626 619690 621570
190303 hypothetical VV10607 Predicted esterase
COG3150
genbank 27364067 NP_759595.1 196 621807 622397
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190304 hypothetical VV10608 Cyclic AMP phosphodiesterase
COG1409
genbank 27364068 NP_759596.1 274 622399 623223
190305 hypothetical VV10609 hypothetical protein
COG3151
genbank 27364069 NP_759597.1 149 623242 623691
190306 hypothetical VV10610 MutT/nudix family protein
COG0494
genbank 27364070 NP_759598.1 211 623691 624326
190307 tolC hypothetical VV10612 outer membrane channel precursor protein
trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell
genbank 27364071 NP_759599.1 310 624947 625879
190308 hypothetical VV10613 ADP-heptose synthase
bifunctional; COG2870; Sugar kinase/adenylyltransferase
genbank 27364072 NP_759600.1 476 625992 627422
190309 hypothetical VV10614 Glutamine synthetase adenylyltransferase
COG1391
genbank 27364073 NP_759601.1 950 627476 630328
190310 hypothetical VV10615 Methyl-accepting chemotaxis protein
COG0840
genbank 27364074 NP_759602.1 418 630434 631690
190311 hypothetical VV10616 Kef-type K+ transport system, predicted NAD-binding component
COG1226
genbank 27364075 NP_759603.1 250 631807 632559
190312 hypothetical VV10617 hypothetical protein
COG3025
genbank 27364076 NP_759604.1 505 632593 634110
190313 hypothetical VV10618 Phosphate transport regulator
distant homolog of PhoU; COG1392
genbank 27364077 NP_759605.1 228 634310 634996
190314 hypothetical VV10619 Phosphate/sulphate permease
COG0306
genbank 27364078 NP_759606.1 419 635131 636390
190315 hypothetical VV10620 SH3 domain protein
COG3103
genbank 27364079 NP_759607.1 203 636574 637185
190316 hypothetical VV10621 General secretion pathway protein A
putative peptidoglycan-binding domain-containing protein; COG3409; COG3267
genbank 27364080 NP_759608.1 718 637259 639415
190317 hypothetical VV10622 tRNA nucleotidyltransferase/poly(A) polymerase
COG0617
genbank 27364081 NP_759609.1 436 639427 640737
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190318 uppP hypothetical VV10623 undecaprenyl pyrophosphate phosphatase
BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
genbank 27364082 NP_759610.1 267 640801 641604
190319 hypothetical VV10624 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
COG0801
genbank 27364083 NP_759611.1 160 641620 642102
190320 hypothetical VV10625 Dihydroneopterin aldolase
COG1539
genbank 27364084 NP_759612.1 119 642099 642458
190321 hypothetical VV10626 hypothetical protein
COG0344
genbank 27364085 NP_759613.1 203 642582 643193
190322 hypothetical VV10627 Predicted hydrolase or acyltransferase
alpha/beta hydrolase superfamily; COG0596
genbank 27364086 NP_759614.1 272 643265 644083
190323 hypothetical VV10628 Metal-dependent protease
contains possible chaperone activity; COG0533
genbank 27364087 NP_759615.1 339 644204 645223
190324 hypothetical VV10629 30S ribosomal protein S21
Interacts with residues in the 16S gene, protecting the stem-loop structure
genbank 27364088 NP_759616.1 71 645452 645667
190325 hypothetical VV10630 hypothetical protein
COG1610
genbank 27364089 NP_759617.1 147 645696 646139
190326 hypothetical VV10631 DNA primase
synthesizes RNA primers at the replication forks
genbank 27364090 NP_759618.1 587 646226 647989
190327 hypothetical VV10632 RNA polymerase sigma factor
Binds with the catalytic core of RNA polymerase to produce the holoenzyme
genbank 27364091 NP_759619.1 624 648089 649963
190328 hypothetical VV10633 hypothetical protein
COG2859
genbank 27364092 NP_759620.1 62 650297 650485
190329 hypothetical VV10634 hypothetical protein
COG2859
genbank 27364093 NP_759621.1 170 650493 651005
190330 hypothetical VV10636 Putative hemolysin
COG3176
genbank 27364094 NP_759622.1 585 651415 653172
190331 hypothetical VV10637 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
COG4663
genbank 27364095 NP_759623.1 360 653435 654517
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190332 hypothetical VV10638 Mannitol/fructose-specific phosphotransferase system, IIA domain
phosphotransferase system, mannitol-specific IIBC component; COG2213; COG4668
genbank 27364096 NP_759624.1 631 655053 656948


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