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Streptococcus mitis Search Results

Record: 1 of 1  
MiniMap IGR626 IGR627 IGR630 IGR634 IGR632 IGR629 IGR625 IGR624 IGR631 IGR633 IGR635 IGR628 SMT0748 SMT0750 SMT0755 SMT0747 SMT0758 ogt, - SMT0751 SMT0749 SMT0746 glyQ, - SMT0757 glyS, - SMT0756 SMT0753 apbE, - SMT0752 SMT0754 SMT0748 SMT0750 SMT0755 SMT0747 SMT0758 ogt, - SMT0751 SMT0749 SMT0746 glyQ, - SMT0757 glyS, - SMT0756 SMT0753 apbE, - SMT0752 SMT0754 SMT0755 SMT0758 ogt, - SMT0751 SMT0749 SMT0746 glyQ, - SMT0757 glyS, - SMT0756 SMT0750 SMT0747 SMT0748 SMT0753 apbE, - SMT0752 SMT0754


Gene ID:SMT0754

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
oxidoreductase, probable SP1472

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
705928

Gene Stop:
707166

Gene Length:
1239

Molecular Weight*:
45413

pI*:
5.24

Net Charge*:
-14.42

EC:
 

Functional Class:

Gene Ontology:

Pathway: pathway table

Comment:


View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|15903369|ref|NP_358919.1|  hypothetical protein spr1326 [...   752   0.0  
 gi|149019421|ref|ZP_01834783.1|  pyridoxine biosynthesis pro...   730   0.0  
 gi|148984816|ref|ZP_01818069.1|  pyridoxine biosynthesis pro...   730   0.0  
 gi|149011704|ref|ZP_01832900.1|  pyridoxine biosynthesis pro...   729   0.0  
 gi|15901322|ref|NP_345926.1|  oxidoreductase, putative [Stre...   729   0.0  
 gi|148990281|ref|ZP_01821492.1|  pyridoxine biosynthesis pro...   728   0.0  
 gi|148992643|ref|ZP_01822311.1|  oxidoreductase, putative [S...   728   0.0  
 gi|157076270|gb|ABV10953.1|  NADPH-dependent FMN reductase [...   724   0.0  
 gi|125717951|ref|YP_001035084.1|  Oxidoreductase, putative [...   721   0.0  
 gi|24379527|ref|NP_721482.1|  hypothetical protein SMU.1090 ...   681   0.0


InterPro Summary:  InterProScan

InterPro
IPR005025
Domain
NADPH-dependent FMN reductase
PF03358 [1-163]T 9.2e-14 PF03358 FMN_red FMN_red
noIPR
unintegrated
unintegrated
G3DSA:3.40.50.360 [1-187]T 2.2e-50 G3DSA:3.40.50.360 no description no description


COGS Summary:  COGS Search
BeTs to 9 clades of COG0431
COG name: Predicted flavoprotein
Functional Class: R
The phylogenetic pattern of COG0431 is ----y--cebr---gp-----
Number of proteins in this genome belonging to this COG is
Blocks Summary:  Blocks Search
***** IPB005025 (NADPH-dependent FMN reductase) with a combined E-value of 7.8e-14.
    IPB005025A    66-89
    IPB005025B    98-110


 ProDom Summary:  Protein Domain Search
Residues 31-85 are 98% similar to a (OXIDOREDUCTASE REDUCTASE AZOREDUCTASE NADPH:QUINONE NADPH-DEPENDENT CHROMATE FMN 1.-.-.- FLAVOPROTEIN FUMARATE) protein domain (PD009603 which is seen in Q8CYK7_STRR6.

Residues 88-161 are similar to a (OXIDOREDUCTASE REDUCTASE NADPH:QUINONE CHROMATE 1.-.-.- FLAVOPROTEIN FUMARATE NADPH-DEPENDENT FMN REDUCTASE) protein domain (PD331045 which is seen in Q97PW8_STRPN.

Residues 164-229 are 84% similar to a (OXIDOREDUCTASE SMU.1090 GBS1114 1.-.-.- OXIDOREDUCTASE SAG1083 SPR1326) protein domain (PD557407 which is seen in Q8DU59_STRMU.

Residues 223-371 are 45% similar to a () protein domain (PD998528 which is seen in Q74HW3_LACJO.

Residues 230-352 are similar to a (OXIDOREDUCTASE CYTOSOLIC SMU.1151C PF0695 SMU.1090 UNCHARACTERIZED YQFA GBS1114 SP0562 SPR0486) protein domain (PD339357 which is seen in Q97PW8_STRPN.


Paralogs:  Local Blast Search


Pfam Summary:  Pfam Search
Residues 1 to 163 (E_value = 4.8e-12) place SMT0754 in the FMN_red family which is described as NADPH-dependent FMN reductase.


 Top PDB Hits:


Gene Protein Sequence:
MKFVGLVGSNYDQSYNRKLLEFIRRHFKLKFELEVLEIDEVPMFNQDEKW
DESFQLRLLYNRITRADGVIIATPEHNHTISASLKSVLEWLSYEVHPFEN
KPVMIVGASYYDQGTSRAQVHLRKILDAPGVNAYTLPGNEFLLGKAKEAF
DAEGNITNEGTINFLETCLDNFVKYVGVVSKLKKPKPIAPEDLYCTNSIA
TTIQGVDPDDPEWVEKAAELVGAVSGDTYVKLDHGILTVNQIDMFLKAMP
FELTFADDNNQFLYFNNAHQDPNTMFGKRVRAQSGNRLGTVHGSLPDSRM
KNVEWVVGVLRNGDQEYVRTIVPGTPEGVINTHNYQAMYYPDGSYAGINE
IIFNFQPWLDWYLNTTGQRLVGGNAAAPAGGHGGADATSGASDAGDAGGH
GGGADATSGASN$

Gene Nucleotide Sequence:  Sequence Viewer
ATGAAATTTGTTGGACTTGTAGGATCAAACTACGATCAATCATATAACCG
TAAACTCTTGGAATTCATCCGTCGTCACTTCAAACTCAAATTTGAATTAG
AAGTTCTCGAAATTGACGAAGTTCCAATGTTTAACCAAGACGAAAAATGG
GATGAAAGTTTCCAATTGCGTCTCTTGTATAACAGAATTACTCGTGCTGA
TGGTGTCATTATCGCTACTCCTGAGCACAACCACACAATCTCAGCTTCTC
TTAAATCTGTTCTTGAATGGCTTTCATACGAAGTTCATCCATTTGAAAAC
AAACCAGTCATGATTGTGGGAGCTTCTTACTACGACCAAGGTACTTCTCG
TGCCCAAGTTCACCTTCGTAAGATTCTTGACGCTCCAGGTGTCAATGCCT
ACACACTTCCAGGAAATGAATTCCTTCTTGGTAAAGCCAAAGAAGCATTT
GACGCAGAGGGCAATATCACAAATGAAGGAACTATTAATTTCCTTGAAAC
ATGCTTGGACAACTTTGTAAAATATGTGGGAGTCGTTTCAAAATTGAAAA
AACCAAAACCAATTGCACCAGAAGATTTATATTGTACAAATTCAATTGCA
ACTACCATTCAAGGTGTTGATCCAGACGATCCTGAATGGGTAGAAAAAGC
AGCTGAACTTGTTGGAGCTGTTTCTGGAGATACTTACGTTAAATTAGACC
ATGGTATCTTGACAGTTAACCAAATTGACATGTTCTTGAAAGCAATGCCA
TTTGAGTTGACATTTGCAGATGATAATAACCAGTTCTTGTACTTTAATAA
CGCACACCAAGATCCAAATACAATGTTTGGTAAACGTGTACGTGCTCAAT
CAGGAAACCGTTTAGGAACTGTACACGGTTCATTGCCAGATTCTCGAATG
AAAAACGTTGAATGGGTTGTTGGCGTACTGCGTAACGGGGATCAAGAATA
TGTCCGTACAATTGTGCCAGGAACACCAGAAGGCGTTATTAATACCCATA
ATTACCAAGCAATGTACTATCCAGATGGTTCATATGCTGGAATCAATGAA
ATCATCTTTAATTTCCAACCATGGCTTGACTGGTACCTCAATACAACTGG
TCAACGTCTAGTTGGTGGAAATGCTGCAGCTCCTGCCGGAGGCCACGGTG
GCGCAGATGCCACATCTGGAGCTTCTGATGCAGGTGATGCTGGAGGTCAC
GGTGGTGGCGCAGACGCTACATCTGGCGCAAGTAACTAA

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