Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss8189867	SC_SNP|NT_011649.11_713828		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	04/16/03	10/25/06	114	Genomic			unknown
ss8540318	SC_SNP|NT_011812.12_455224		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	05/23/03	10/10/03	117	Genomic			unknown
ss12026098	WI_SSAHASNP|chrX.NT_011812.12_455224		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	07/04/03	10/10/03	117	Genomic			unknown
ss19815020	CSHL-HAPMAP|CSHL-HuDD-200402.chrX.NT_011757.13_455224		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	02/20/04	03/04/04	120	Genomic			unknown
ss20977876	SSAHASNP|WGSA-200403-chrX.chrX.NT_011757.13_455224		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	03/19/04	03/19/04	121	Genomic			unknown
ss24228126	PERLEGEN|afd3856991		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	08/10/04	09/13/04	123	Genomic			unknown
ss43554166	ABI|hCV30246820		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	07/18/05	07/18/05	126	Genomic			unknown
ss76844382	AFFY|AFFY_6_1M_SNP_A-8706036		fwd/B	G/T	gcattatctcgcttca	cttttgtagaaatcta	08/28/07	08/30/07	130	Genomic			unknown
ss83392043	HGSV|Cor18555_SNV_20070510.chrX_4248316		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	11/27/07	12/04/07	130	Genomic			unknown
ss84183815	HGSV|Cor19240_SNV_20070510.chrX_4248316		fwd/B	G/T	ctagacaatttgtagcattatctcgcttca	cttttgtagaaatctattaacattttattt	11/30/07	12/06/07	130	Genomic			unknown

Fasta sequence   (Legend)

 AATAAGATAT GCTTGTTGAC TCTGCCAAAT GGAAAGTGGA ACTGATTTCT GGAGGTTTGA
 TCCTAATTCT GGTTTTTTTG GTTGTTGTTG TTTGTTTGTT TGTTTTCCAG GGCAGTATCA
 GATAGTTTCT ATCGGGGGGG CCAAGAAAGA AGTCATTGCA CAATTCTCAA AGCCCATCAT
 TTAAACATGA GTCAATGATC ATTTTTGCAG GGTGAGAATT TGGGAGATTG TTACGGCAGA
 TTGCTCAACC AAGTCAACAC CTCAGCCCAT TTTCATTCTG TCATACATTT CTTGAGAAGG
 AAAAAACGTG TAATTGAAGT GGAGAGATAT ATTTTACGTC AACCCATTTT TACTGTGAGT
 TTATAATCTG CTAGACAATT TGTAGCATTA TCTCGCTTCA
 K
 CTTTTGTAGA AATCTATTAA CATTTTATTT CTTTTTAATC AGTTAATAAA TGGAGGTAGG
 TATAGAGGCA TTCAGAAAAT TAGTCAAAGG TGCAAAGTTA CAGCATGTGA AGACATCAAC
 ATAGGCAGCC CAATATCTTA CCCATAAGCC AAtgacattt tgcatcagat gatttttttt
 tgtggtaggg gccgctcttt gcattgtagg atgatttgca gcatttctgg cctgcacaaa
 ctagatgcca gtagcaatac ctctccctcc ttaaagatgt gacaattggc atgtcttcag
 acagtgtcaa gtgtcattgt gggggATGGG GGGGTGGGCA GGGGTGTAGA AAATACCCCA
 GGTTGATAAT CATTGCATTG GTTCATTCAA GTAGACTAAA

GeneView

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	G/G	G/T	T/T	HWP	G	T
ss24228126	AFD_EUR_PANEL	European	48	IG	0.292	0.208	0.500	0.010	0.396	0.604
	AFD_AFR_PANEL	African American	46	IG	0.043	0.174	0.783	0.273	0.130	0.870
	AFD_CHN_PANEL	Asian	48	IG	0.417	0.333	0.250	0.150	0.583	0.417
ss8189867	HapMap-CEU	European	120	IG	0.350	0.167	0.483	0.100	0.433	0.567
	HapMap-HCB	Asian	90	IG	0.533	0.178	0.289	0.294	0.622	0.378
	HapMap-JPT	Asian	88	IG	0.432	0.159	0.409	0.100	0.511	0.489
	HapMap-YRI	Sub-Saharan African	120	IG	0.017	0.017	0.967	1.000	0.025	0.975

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP	UNKNOWN	UNKNOWN	UNKNOWN