Vibrio cholerae O1 biovar eltor str. N16961 chromosome I

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217561-217660 (1-100) [217661-217760 (101-200)] 217761-217860 (201-300) 217861-217960 (301-400) 217961-218060 (401-500)
218061-218160 (501-600) 218161-218260 (601-700) 218261-218360 (701-800) 218361-218460 (801-900) 218461-218560 (901-1000)
218561-218660 (1001-1100) 218661-218760 (1101-1200) 218761-218860 (1201-1300) 218861-218960 (1301-1400) 218961-219060 (1401-1500)
219061-219160 (1501-1600) 219161-219260 (1601-1700) 219261-219360 (1701-1800) 219361-219460 (1801-1900) 219461-219560 (1901-2000)
219561-219660 (2001-2100) 219661-219760 (2101-2200) 219761-219860 (2201-2300) 219861-219960 (2301-2400) 219961-220060 (2401-2500)
220061-220160 (2501-2600) 220161-220260 (2601-2700) 220261-220302 (2701-2742)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
217661 hypothetical VC0101 hypothetical protein
identified by Glimmer2; putative
genbank 15640133 NP_229760.1 71 99187 99402
217662 hypothetical VC0102 hypothetical protein
identified by Glimmer2; putative
genbank 15640134 NP_229761.1 46 99635 99775
217663 hypothetical VC0103 hypothetical protein
identified by Glimmer2; putative
genbank 15640135 NP_229762.1 255 99867 100634
217664 hypothetical VC0104 hypothetical protein
identified by Glimmer2; putative
genbank 15640136 NP_229763.1 44 100690 100824
217665 hypothetical VC0105 delta-aminolevulinic acid dehydratase
catalyzes the formation of porphobilinogen from 5-aminolevulinate
genbank 15640137 NP_229764.1 347 100811 101854
217666 hypothetical VC0106 hypothetical protein
identified by Glimmer2; putative
genbank 15640138 NP_229765.1 143 101958 102389
217667 hypothetical VC0107 hypothetical protein
identified by Glimmer2; putative
genbank 15640139 NP_229766.1 45 102908 103045
217668 hypothetical VC0108 DNA polymerase I
has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
genbank 15640140 NP_229767.1 934 103098 105902
217669 hypothetical VC0109 hypothetical protein
identified by Glimmer2; putative
genbank 15640141 NP_229768.1 37 105855 105968
217670 hypothetical VC0110 hypothetical protein
identified by Glimmer2; putative
genbank 15640142 NP_229769.1 44 106165 106299
217671 hypothetical VC0111 GTP-binding protein
binds guanine nucleotides; depletion results in defective cell division
genbank 15640143 NP_229770.1 220 106649 107311
217672 hypothetical VC0112 cytochrome c4
similar to GB:U05988 PID:516878 SP:Q52369; identified by sequence similarity; putative
genbank 15640144 NP_229771.1 223 107409 108080
217673 hypothetical VC0113 methyltransferase-related protein
similar to SP:P37431 PID:295895; identified by sequence similarity; putative
genbank 15640145 NP_229772.1 222 108252 108920
217674 hypothetical VC0114 hypothetical protein
identified by Glimmer2; putative
genbank 15640146 NP_229773.1 182 108920 109468
217675 hypothetical VC0115 hypothetical protein
identified by Glimmer2; putative
genbank 15640147 NP_229774.1 163 109475 109966
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
217676 hypothetical VC0116 coproporphyrinogen III oxidase
catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
genbank 15640148 NP_229775.1 480 110051 111493
217677 hypothetical VC0117 hemY protein
similar to GB:M87049 SP:P09128 GB:X12614 PID:148201 PID:41669; identified by sequence similarity; putative
genbank 15640149 NP_229776.1 398 111557 112753
217678 hypothetical VC0118 uroporphyrin-III C-methyltransferase, putative
similar to GB:M87049 SP:P09127 GB:X12614 GB:X13406 PID:148202; identified by sequence similarity; putative
genbank 15640150 NP_229777.1 399 112750 113949
217679 hypothetical VC0119 uroporphyrinogen-III synthetase
catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane
genbank 15640151 NP_229778.1 260 113933 114715
217680 hypothetical VC0120 porphobilinogen deaminase
transformation of 4 prophobilinogen to hydroxymethylbilane in prophyrin biosynthesis
genbank 15640152 NP_229779.1 317 114761 115714
217681 hypothetical VC0121 hypothetical protein
identified by Glimmer2; putative
genbank 15640153 NP_229780.1 48 115891 116037
217682 cyaA hypothetical VC0122 adenylate cyclase
catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP
genbank 15640154 NP_229781.1 843 116053 118584
217683 cyaY hypothetical VC0123 frataxin-like protein
defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly
genbank 15640155 NP_229782.1 104 118690 119004
217684 hypothetical VC0125 diaminopimelate decarboxylase
similar to SP:P19572; identified by sequence similarity; putative
genbank 15640156 NP_229783.1 417 119229 120482
217685 dapF hypothetical VC0126 diaminopimelate epimerase
involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
genbank 15640157 NP_229784.1 290 120452 121324
217686 hypothetical VC0127 hypothetical protein
identified by Glimmer2; putative
genbank 15640158 NP_229785.1 232 121338 122036
217687 hypothetical VC0128 tyrosine recombinase
includes large family of site-specific recombinases; XerC; XerD; affects chromosome segregation during cell division and dimer resolution of plasmids
genbank 15640159 NP_229786.1 311 122005 122940
217688 hypothetical VC0129 hypothetical protein
identified by Glimmer2; putative
genbank 15640160 NP_229787.1 239 122943 123662
217689 hypothetical VC0130 GGDEF family protein
similar to SP:P55552 PID:2182511; identified by sequence similarity; putative
genbank 15640161 NP_229788.1 829 123772 126261
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
217690 hypothetical VC0131 hypothetical protein
identified by Glimmer2; putative
genbank 15640162 NP_229789.1 198 126294 126890
217691 hypothetical VC0132 hypothetical protein
identified by Glimmer2; putative
genbank 15640163 NP_229790.1 514 126887 128431
217692 hypothetical VC0133 hypothetical protein
identified by Glimmer2; putative
genbank 15640164 NP_229791.1 62 128444 128632
217693 hypothetical VC0134 hypothetical protein
identified by Glimmer2; putative
genbank 15640165 NP_229792.1 275 128715 129542
217694 hypothetical VC0135 lysophospholipase L2
similar to PID:1449198; identified by sequence similarity; putative
genbank 15640166 NP_229793.1 338 129657 130673
217695 hypothetical VC0136 hypothetical protein
identified by Glimmer2; putative
genbank 15640167 NP_229794.1 205 130748 131365
217696 hypothetical VC0137 hypothetical protein
identified by Glimmer2; putative
genbank 15640168 NP_229795.1 432 131313 132611
217697 hypothetical VC0138 hypothetical protein
identified by Glimmer2; putative
genbank 15640169 NP_229796.1 39 132619 132738
217698 hypothetical VC0139 DPS family protein
similar to GB:L42023 SP:P45173 PID:1007363 PID:1221482 PID:1205585; identified by sequence similarity; putative
genbank 15640170 NP_229797.1 156 132791 133261
217699 hypothetical VC0140 hypothetical protein
identified by Glimmer2; putative
genbank 15640171 NP_229798.1 109 133431 133760
217700 hypothetical VC0141 hypothetical protein
identified by Glimmer2; putative
genbank 15640172 NP_229799.1 34 133799 133903
217701 hypothetical VC0142 hypothetical protein
identified by Glimmer2; putative
genbank 15640173 NP_229800.1 122 133965 134333
217702 hypothetical VC0143 hypothetical protein
identified by Glimmer2; putative
genbank 15640174 NP_229801.1 85 134836 135093
217703 hypothetical VC0144 hypothetical protein
identified by Glimmer2; putative
genbank 15640175 NP_229802.1 209 135210 135839
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
217704 hypothetical VC0145 hypothetical protein
identified by Glimmer2; putative
genbank 15640176 NP_229803.1 88 135888 136154
217705 hypothetical VC0146 hypothetical protein
identified by Glimmer2; putative
genbank 15640177 NP_229804.1 199 136151 136750
217706 hypothetical VC0147 cell division protein FtsY
similar to SP:P10121 GB:U00039 GB:X04398 PID:41498 PID:466600; identified by sequence similarity; putative
genbank 15640178 NP_229805.1 391 136954 138129
217707 hypothetical VC0148 cell division ATP-binding protein FtsE
similar to SP:P10115 GB:U00039 GB:X04398 PID:41499 PID:466599; identified by sequence similarity; putative
genbank 15640179 NP_229806.1 233 138151 138852
217708 hypothetical VC0149 cell division protein FtsX
similar to SP:P10122 GB:U00039 GB:X04398 PID:41500 PID:466598; identified by sequence similarity; putative
genbank 15640180 NP_229807.1 330 138842 139834
217709 hypothetical VC0150 RNA polymerase sigma factor
Binds with the catalytic core of RNA polymerase to produce the holoenzyme
genbank 15640181 NP_229808.1 286 140004 140864
217710 hypothetical VC0151 soluble pyridine nucleotide transhydrogenase
catalyzes the conversionof NADPH to NADH
genbank 15640182 NP_229809.1 466 141066 142466
217711 hypothetical VC0152 transcriptional regulator, TetR family
similar to GB:U00096 PID:1790401; identified by sequence similarity; putative
genbank 15640183 NP_229810.1 213 142774 143415
217712 hypothetical VC0153 hypothetical protein
identified by Glimmer2; putative
genbank 15640184 NP_229811.1 123 143455 143826
217713 hypothetical VC0154 tRNA (uracil-5-)-methyltransferase
Catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs
genbank 15640185 NP_229812.1 369 143863 144972
217714 hypothetical VC0156 vitamin B12 receptor
similar to SP:P06129 GB:L14556 GB:M10112 PID:145440 PID:290427; identified by sequence similarity; putative
genbank 15640186 NP_229813.1 611 145370 147205
217715 hypothetical VC0157 alkaline serine protease
similar to GB:M25499 SP:P16588 PID:155251; identified by sequence similarity; putative
genbank 15640187 NP_229814.1 535 147278 148885
217716 hypothetical VC0158 glutamate racemase
converts L-glutamate to D-glutamate a component of peptidoglycan
genbank 15640188 NP_229815.1 265 149278 150075
217717 hypothetical VC0159 RNA-binding protein
similar to GB:AE000511 PID:2313961; identified by sequence similarity; putative
genbank 15640189 NP_229816.1 152 150041 150499
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
217718 hypothetical VC0160 hypothetical protein
identified by Glimmer2; putative
genbank 15640190 NP_229817.1 39 150905 151024
217719 hypothetical VC0161 transcriptional activator IlvY
similar to GB:L42023 SP:P44821 PID:1005575 PID:1220765 PID:1204932; identified by sequence similarity; putative
genbank 15640191 NP_229818.1 298 156407 157303
217720 hypothetical VC0162 ketol-acid reductoisomerase
catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
genbank 15640192 NP_229819.1 494 157441 158925
217721 hypothetical VC0163 hypothetical protein
identified by Glimmer2; putative
genbank 15640193 NP_229820.1 83 159052 159303
217722 hypothetical VC0164 multidrug resistance protein, putative
similar to GB:L42023 PID:1005991 PID:1220999 PID:1205142 SP:Q57124; identified by sequence similarity; putative
genbank 15640194 NP_229821.1 1036 159419 162529
217723 hypothetical VC0165 hypothetical protein
identified by Glimmer2; putative
genbank 15640195 NP_229822.1 368 162541 163647
217724 hypothetical VC0166 transcriptional regulator, TetR family
similar to GB:L42023 SP:P44923 PID:1005987 PID:1220997 PID:1205140; identified by sequence similarity; putative
genbank 15640196 NP_229823.1 198 163666 164262
217725 hypothetical VC0167 ATP-dependent DNA helicase Rep
similar to GB:M87049 SP:P09980 GB:X04794 PID:148182 GB:U00096; identified by sequence similarity; putative
genbank 15640197 NP_229824.1 671 164408 166423
217726 hypothetical VC0168 cytochrome c5
similar to PID:2231996; identified by sequence similarity; putative
genbank 15640198 NP_229825.1 135 166490 166897
217727 hypothetical VC0169 hypothetical protein
identified by Glimmer2; putative
genbank 15640199 NP_229826.1 55 168232 168399
217728 hypothetical VC0170 peptide ABC transporter, ATP-binding protein
similar to GB:U00096 PID:1787051; identified by sequence similarity; putative
genbank 15640200 NP_229827.1 571 168532 170247
217729 hypothetical VC0171 peptide ABC transporter, periplasmic peptide-binding protein
similar to SP:P23847 GB:M35045 GB:X58051 PID:145797 PID:349225; identified by sequence similarity; putative
genbank 15640201 NP_229828.1 542 170267 171895
217730 hypothetical VC0172 peptide ABC transporter, permease protein
similar to PID:1813496; identified by sequence similarity; putative
genbank 15640202 NP_229829.1 342 171999 173027
217731 hypothetical VC0173 peptide ABC transporter, permease protein
similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964; identified by sequence similarity; putative
genbank 15640203 NP_229830.1 312 173030 173968
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
217732 hypothetical VC0174 hypothetical protein
identified by Glimmer2; putative
genbank 15640204 NP_229831.1 315 174143 175090
217733 hypothetical VC0175 deoxycytidylate deaminase-related protein
similar to GB:AE000782; identified by sequence similarity; putative
genbank 15640205 NP_229832.1 532 175343 176941
217734 hypothetical VC0176 transcriptional regulator, putative
similar to GB:M36477 SP:P23789 GB:M36478 PID:143833 PID:1225936; identified by sequence similarity; putative
genbank 15640206 NP_229833.1 102 177450 177758
217735 hypothetical VC0177 hypothetical protein
identified by Glimmer2; putative
genbank 15640207 NP_229834.1 187 177861 178424
217736 hypothetical VC0178 patatin-related protein
similar to SP:P11768 PID:169498 PID:169500 PID:21415; identified by sequence similarity; putative
genbank 15640208 NP_229835.1 355 179338 180405
217737 hypothetical VC0179 hypothetical protein
identified by Glimmer2; putative
genbank 15640209 NP_229836.1 436 180419 181729
217738 hypothetical VC0180 hypothetical protein
identified by Glimmer2; putative
genbank 15640210 NP_229837.1 584 181732 183486
217739 hypothetical VC0181 hypothetical protein
identified by Glimmer2; putative
genbank 15640211 NP_229838.1 156 183476 183946
217740 hypothetical VC0182 hypothetical protein
identified by Glimmer2; putative
genbank 15640212 NP_229839.1 143 183957 184388
217741 hypothetical VC0183 hypothetical protein
identified by Glimmer2; putative
genbank 15640213 NP_229840.1 703 184360 186471
217742 hypothetical VC0184 hypothetical protein
identified by Glimmer2; putative
genbank 15640214 NP_229841.1 562 186481 188169
217743 hypothetical VC0185 transposase, putative
similar to SP:P06696 PID:581277 PID:154921; identified by sequence similarity; putative
genbank 15640215 NP_229842.1 404 188166 189380
217744 hypothetical VC0186 glutathione reductase
Involved in redox regulation and oxidative defense
genbank 15640216 NP_229843.1 454 189457 190821
217745 hypothetical VC0187 hypothetical protein
identified by Glimmer2; putative
genbank 15640217 NP_229844.1 279 190915 191754
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
217746 hypothetical VC0188 oligopeptidase A
similar to GB:M84574 SP:P27237 PID:154214; identified by sequence similarity; putative
genbank 15640218 NP_229845.1 680 192034 194076
217747 hypothetical VC0189 hypothetical protein
identified by Glimmer2; putative
genbank 15640219 NP_229846.1 32 194101 194199
217748 hypothetical VC0190 DNA helicase II
similar to GB:M87049 SP:P03018 GB:D00069 GB:X00225 GB:X00738; identified by sequence similarity; putative
genbank 15640220 NP_229847.1 723 194214 196385
217749 hypothetical VC0191 hypothetical protein
identified by Glimmer2; putative
genbank 15640221 NP_229848.1 222 197130 197798
217750 hypothetical VC0192 transcriptional regulator, AraC/XylS family
similar to GP:3294250; identified by sequence similarity; putative
genbank 15640222 NP_229849.1 270 197873 198685
217751 hypothetical VC0193 hypothetical protein
identified by Glimmer2; putative
genbank 15640223 NP_229850.1 31 198722 198817
217752 hypothetical VC0194 gamma-glutamyltranspeptidase
similar to GB:AL123456; identified by sequence similarity; putative
genbank 15640224 NP_229851.1 588 198833 200599
217753 hypothetical VC0195 rarD protein
similar to SP:P27844 PID:145580 GB:U00096 PID:1790252; identified by sequence similarity; putative
genbank 15640225 NP_229852.1 302 200761 201669
217754 hypothetical VC0196 ATP-dependent DNA helicase RecQ
similar to GB:M87049 SP:P15043 GB:M30198 PID:147559 PID:148221; identified by sequence similarity; putative
genbank 15640226 NP_229853.1 620 201803 203665
217755 hypothetical VC0197 gene 3 protein-related protein
similar to GP:2058400; identified by sequence similarity; putative
genbank 15640227 NP_229854.1 99 203658 203957
217756 hypothetical VC0198 hypothetical protein
identified by Glimmer2; putative
genbank 15640228 NP_229855.1 125 204113 204490
217757 hypothetical VC0199 hemolysin secretion ATP-binding protein, putative
similar to GB:L42023 PID:1006302 PID:1221167 PID:1205301 SP:Q57180; identified by sequence similarity; putative
genbank 15640229 NP_229856.1 611 204526 206361
217758 hypothetical VC0200 iron(III) compound receptor
similar to GB:D26562 SP:P06971 GB:M12486 PID:145949 PID:473809; identified by sequence similarity; putative
genbank 15640230 NP_229857.1 718 206433 208589
217759 hypothetical VC0201 iron(III) ABC transporter, ATP-binding protein
similar to PID:41440 GB:U00096 PID:1552729 PID:1786345; identified by sequence similarity; putative
genbank 15640231 NP_229858.1 285 208648 209505
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
217760 hypothetical VC0202 iron(III) ABC transporter, periplasmic iron-compound-binding protein
similar to GB:D26562 SP:P07822 GB:M12486 PID:145951 PID:41441; identified by sequence similarity; putative
genbank 15640232 NP_229859.1 319 209496 210455


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