Vibrio fischeri ES114 chromosome I

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174278-174377 (1-100) 174378-174477 (101-200) 174478-174577 (201-300) 174578-174677 (301-400) 174678-174777 (401-500)
174778-174877 (501-600) [174878-174977 (601-700)] 174978-175077 (701-800) 175078-175177 (801-900) 175178-175277 (901-1000)
175278-175377 (1001-1100) 175378-175477 (1101-1200) 175478-175577 (1201-1300) 175578-175677 (1301-1400) 175678-175777 (1401-1500)
175778-175877 (1501-1600) 175878-175977 (1601-1700) 175978-176077 (1701-1800) 176078-176177 (1801-1900) 176178-176277 (1901-2000)
176278-176377 (2001-2100) 176378-176477 (2101-2200) 176478-176577 (2201-2300) 176578-176677 (2301-2400) 176678-176777 (2401-2500)
176778-176852 (2501-2575)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
174878 hypothetical VF0601 hypothetical protein genbank 59711208 YP_203984.1 149 661195 661644
174879 hypothetical VF0602 hypothetical protein genbank 59711209 YP_203985.1 89 661644 661913
174880 hypothetical VF0603 PTS system, cellobiose-specific IIC component genbank 59711210 YP_203986.1 451 662898 664253
174881 hypothetical VF0604 hypothetical protein genbank 59711211 YP_203987.1 101 664286 664591
174882 hypothetical VF0605 6-phospho-beta-glucosidase genbank 59711212 YP_203988.1 469 664631 666040
174883 hypothetical VF0606 glucokinase
transcription regulator
genbank 59711213 YP_203989.1 311 666067 667002
174884 hypothetical VF0607 PTS system, diacetylchitobiose-specific IIA component genbank 59711214 YP_203990.1 107 667014 667337
174885 hypothetical VF0608 transcriptional regulator, LacI family genbank 59711215 YP_203991.1 334 667407 668411
174886 hypothetical VF0609 outer membrane protein S genbank 59711216 YP_203992.1 425 668672 669949
174887 hypothetical VF0610 hypothetical protein genbank 59711217 YP_203993.1 102 670016 670324
174888 hypothetical VF0611 hypothetical protein genbank 59711218 YP_203994.1 345 670328 671365
174889 hypothetical VF0612 hypothetical protein genbank 59711219 YP_203995.1 104 671468 671782
174890 hypothetical VF0613 tRNA pseudouridine synthase C genbank 59711220 YP_203996.1 259 671784 672563
174891 hypothetical VF0614 myo-inositol-1(or 4)-monophosphatase genbank 59711221 YP_203997.1 267 672629 673432
174892 hypothetical VF0615 RRNA methylase, SpoU family genbank 59711222 YP_203998.1 241 673640 674365
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
174893 hypothetical VF0616 Rrf2 family protein genbank 59711223 YP_203999.1 168 674473 674979
174894 hypothetical VF0617 cysteine desulfurase
involved in the biosynthesis of iron-sulfur clusters
genbank 59711224 YP_204000.1 419 674966 676225
174895 hypothetical VF0618 IscU protein genbank 59711225 YP_204001.1 127 676260 676643
174896 hypothetical VF0619 HesB protein family genbank 59711226 YP_204002.1 107 676768 677091
174897 hscB hypothetical VF0620 co-chaperone HscB
J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
genbank 59711227 YP_204003.1 171 677107 677622
174898 hscA hypothetical VF0621 chaperone protein HscA
involved in the maturation of iron-sulfur cluster-containing proteins
genbank 59711228 YP_204004.1 616 677661 679511
174899 hypothetical VF0622 ferredoxin, 2Fe-2s genbank 59711229 YP_204005.1 112 679514 679852
174900 hypothetical VF0623 hypothetical protein genbank 59711230 YP_204006.1 66 679975 680175
174901 hypothetical VF0624 aminopeptidase B
catalyzes the removal of an N-terminal amino acid from a peptide or arylamide
genbank 59711231 YP_204007.1 428 680406 681692
174902 hypothetical VF0625 nucleoside diphosphate kinase
catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
genbank 59711232 YP_204008.1 144 681981 682415
174903 hypothetical VF0626 radical SAM family enzyme genbank 59711233 YP_204009.1 372 682649 683767
174904 hypothetical VF0627 PilF protein genbank 59711234 YP_204010.1 210 683798 684430
174905 hypothetical VF0628 integral membrane protein genbank 59711235 YP_204011.1 304 684550 685464
174906 hypothetical VF0629 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate
genbank 59711236 YP_204012.1 372 685477 686595
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
174907 hisS hypothetical VF0630 histidyl-tRNA synthetase
Catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
genbank 59711237 YP_204013.1 422 686634 687902
174908 hypothetical VF0631 hypothetical protein genbank 59711238 YP_204014.1 203 687914 688525
174909 hypothetical VF0632 hypothetical protein genbank 59711239 YP_204015.1 385 688536 689693
174910 hypothetical VF0633 GTP-binding protein EngA genbank 59711240 YP_204016.1 500 689875 691377
174911 hypothetical VF0634 hypothetical protein genbank 59711241 YP_204017.1 291 691457 692332
174912 hypothetical VF0635 hypothetical protein genbank 59711242 YP_204018.1 77 692650 692883
174913 hypothetical VF0636 exodeoxyribonuclease VII large subunit
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
genbank 59711243 YP_204019.1 449 692876 694225
174914 hypothetical VF0637 inositol-5-monophosphate dehydrogenase genbank 59711244 YP_204020.1 487 694434 695897
174915 guaA hypothetical VF0638 bifunctional GMP synthase/glutamine amidotransferase protein
contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
genbank 59711245 YP_204021.1 517 696099 697652
174916 hypothetical VF0639 aminobenzoyl-glutamate transport protein genbank 59711246 YP_204022.1 519 697928 699487
174917 hypothetical VF0640 hypothetical protein genbank 59711247 YP_204023.1 211 699562 700197
174918 hypothetical VF0641 hypothetical protein genbank 59711248 YP_204024.1 425 700257 701534
174919 hypothetical VF0642 translation initiation inhibitor genbank 59711249 YP_204025.1 126 701560 701940
174920 hypothetical VF0643 serine transporter genbank 59711250 YP_204026.1 434 702237 703541
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
174921 hypothetical VF0644 S-formylglutathione hydrolase genbank 59711251 YP_204027.1 280 703609 704451
174922 hypothetical VF0645 glutathione-dependent formaldehyde dehydrogenase genbank 59711252 YP_204028.1 382 704669 705817
174923 hypothetical VF0646 Thiol:disulfide interchange protein DsbA genbank 59711253 YP_204029.1 199 706531 707130
174924 hypothetical VF0647 proton/sodium-glutamate symport protein genbank 59711254 YP_204030.1 425 707202 708479
174925 hypothetical VF0648 glutathione-dependent formaldehyde dehydrogenase genbank 59711255 YP_204031.1 382 708678 709826
174926 hypothetical VF0649 transcriptional regulators, LysR family genbank 59711256 YP_204032.1 290 710001 710873
174927 hypothetical VF0650 tRNA-specific adenosine deaminase genbank 59711257 YP_204033.1 171 710874 711389
174928 hypothetical VF0651 amino-acid abc transporter binding protein
transglycosylase
genbank 59711258 YP_204034.1 363 712146 713237
174929 hypothetical VF0652 phosphoribosylformylglycinamidine synthase
catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
genbank 59711259 YP_204035.1 1303 713601 717512
174930 hypothetical VF0653 23S rRNA methyltransferase genbank 59711260 YP_204036.1 169 717753 718262
174931 hypothetical VF0654 hypothetical protein genbank 59711261 YP_204037.1 106 718431 718751
174932 hypothetical VF0655 endochitinase genbank 59711262 YP_204038.1 846 718813 721353
174933 hypothetical VF0656 transcription elongation factor genbank 59711263 YP_204039.1 161 721606 722091
174934 hypothetical VF0657 succinylglutamate desuccinylase/aspartoacylase family protein genbank 59711264 YP_204040.1 364 722153 723247
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
174935 hypothetical VF0658 ribosomal protein S6 modification protein genbank 59711265 YP_204041.1 301 723207 724112
174936 hypothetical VF0659 ribosomal protein S6 modification protein genbank 59711266 YP_204042.1 146 724112 724552
174937 hypothetical VF0660 transporter genbank 59711267 YP_204043.1 447 725044 726387
174938 hypothetical VF0661 hypothetical protein genbank 59711268 YP_204044.1 62 726487 726675
174939 hypothetical VF0662 hypothetical protein genbank 59711269 YP_204045.1 72 726675 726893
174940 hypothetical VF0663 N-acetylneuraminate lyase genbank 59711270 YP_204046.1 297 727008 727901
174941 hypothetical VF0664 transcriptional regulator, RpiR family genbank 59711271 YP_204047.1 292 728194 729072
174942 hypothetical VF0665 N-acetylglucosamine-6-phosphate deacetylase genbank 59711272 YP_204048.1 386 729131 730291
174943 hypothetical VF0666 N-acetylmannosamine-6-phosphate 2-epimerase genbank 59711273 YP_204049.1 245 730519 731256
174944 hypothetical VF0667 N-acetylmannosamine kinase
Catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein
genbank 59711274 YP_204050.1 291 731253 732128
174945 hypothetical VF0668 sodium-glucose/galactose cotransporter genbank 59711275 YP_204051.1 505 732188 733705
174946 hypothetical VF0669 hypothetical cytosolic protein genbank 59711276 YP_204052.1 156 733761 734231
174947 hypothetical VF0670 urease accessory protein UreG genbank 59711277 YP_204053.1 206 734350 734970
174948 hypothetical VF0671 urease accessory protein UreF genbank 59711278 YP_204054.1 221 734980 735645
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
174949 hypothetical VF0672 urease accessory protein UreE genbank 59711279 YP_204055.1 163 735657 736148
174950 hypothetical VF0673 urease alpha subunit genbank 59711280 YP_204056.1 567 736210 737913
174951 hypothetical VF0674 urease beta subunit genbank 59711281 YP_204057.1 118 737913 738269
174952 hypothetical VF0675 urease gamma subunit genbank 59711282 YP_204058.1 100 738280 738582
174953 hypothetical VF0676 urease accessory protein UreD genbank 59711283 YP_204059.1 287 738599 739462
174954 hypothetical VF0677 putative dipeptide ABC transporter genbank 59711284 YP_204060.1 212 739832 740470
174955 hypothetical VF0678 oligopeptide transport ATP-binding protein OppD genbank 59711285 YP_204061.1 250 740421 741173
174956 hypothetical VF0679 oligopeptide transport system permease protein OppC genbank 59711286 YP_204062.1 254 741163 741927
174957 hypothetical VF0680 oligopeptide transport system permease protein OppB genbank 59711287 YP_204063.1 331 741946 742941
174958 hypothetical VF0681 oligopeptide-binding protein OppA genbank 59711288 YP_204064.1 556 742920 744590
174959 hypothetical VF0682 prolyl-tRNA synthetase
catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
genbank 59711289 YP_204065.1 575 744946 746673
174960 hypothetical VF0683 putative transcriptional regulator genbank 59711290 YP_204066.1 237 746810 747523
174961 hypothetical VF0684 methionine-binding protein genbank 59711291 YP_204067.1 269 747603 748412
174962 hypothetical VF0685 methionine transport system permease protein genbank 59711292 YP_204068.1 225 748451 749128
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
174963 hypothetical VF0686 methionine transport ATP-binding protein genbank 59711293 YP_204069.1 367 749118 750221
174964 hypothetical VF0687 hypothetical protein genbank 59711294 YP_204070.1 183 750375 750926
174965 hypothetical VF0688 oligopeptide transport system permease protein OppB genbank 59711295 YP_204071.1 342 751604 752632
174966 hypothetical VF0689 oligopeptide transport system permease protein OppC genbank 59711296 YP_204072.1 350 752635 753687
174967 hypothetical VF0690 oligopeptide-binding protein OppA genbank 59711297 YP_204073.1 613 753793 755634
174968 hypothetical VF0691 oligopeptide transport ATP-binding protein OppD genbank 59711298 YP_204074.1 334 755722 756726
174969 hypothetical VF0692 oligopeptide transport ATP-binding protein OppF genbank 59711299 YP_204075.1 322 756723 757691
174970 hypothetical VF0693 hypothetical protein genbank 59711300 YP_204076.1 109 757769 758098
174971 hypothetical VF0694 hypothetical membrane spanning protein genbank 59711301 YP_204077.1 202 758192 758800
174972 hypothetical VF0695 serine hydroxymethyltransferase
catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
genbank 59711302 YP_204078.1 416 759200 760450
174973 hypothetical VF0696 accessory colonization factor AcfD-like protein genbank 59711303 YP_204079.1 1569 760753 765462
174974 hypothetical VF0697 hypothetical protein genbank 59711304 YP_204080.1 108 765554 765880
174975 hypothetical VF0698 methyl-accepting chemotaxis protein genbank 59711305 YP_204081.1 662 765965 767953
174976 hypothetical VF0699 hypothetical protein genbank 59711306 YP_204082.1 149 768122 768571
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
174977 hypothetical VF0700 5-amino-6-(5-phosphoribosylamino)uracil reductase
diaminohydroxyphosphoribosylaminopyrimidine deaminase
genbank 59711307 YP_204083.1 372 768573 769691


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LLNL Disclaimers
UCRL-WEB-219375