proteins
| 28 proteins |
P | COG1392 | Phosphate transport regulator (distant homolog of PhoU) | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Listeria innocua (Bacillales | Bacilli) | ||||
| lin2350 | ||||
206 letters (r) 0
0 906 = ||| 1 lin2350 (206) = -1
10 158 = 10 SMc02862 (214) = 3
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= lin2350
(206 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
lin2350 353 1e-97
BS_ykaA 186 3e-47
SA0618 169 3e-42
RSc1312 88 2e-17
CAC3094 80 4e-15
SMc02862 65 9e-11
DR0924 64 2e-10
mlr8369 63 4e-10
AGl497 57 4e-08
MTH1689 47 4e-05
TM0914 41 0.002
PM0250 39 0.007
VC2441 39 0.007
PA5208 38 0.013
MJ0629 37 0.021
HI1603 37 0.025
PH0637 37 0.039
STM2559 34 0.22
CPn0681 34 0.24
CT691 33 0.30
PAB0929 32 0.75
BB0220 32 0.94
MYPU_4080 31 2.0
TVN0064 31 2.1
CAC0675 30 2.5
NMB0284 30 2.6
NMA2203 30 2.6
SMc02230 30 3.1
TM1652 30 3.8
AF2149 30 5.3
PM1132 29 5.7
YOR165w 29 7.6
PAE3187 29 8.3
# >lin2350
# Length = 206
#
# Score = 353 bits (906), Expect = 1e-97
# Identities = 206/206 (100%), Positives = 206/206 (100%)
#
# Query: 1 MAFKNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKM 60
# MAFKNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKM
# Sbjct: 1 MAFKNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKM 60
#
# Query: 61 IMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQAS 120
# IMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQAS
# Sbjct: 61 IMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQAS 120
#
# Query: 121 TVEIEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRESLIQLFQNEKDPIKLIRLREV 180
# TVEIEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRESLIQLFQNEKDPIKLIRLREV
# Sbjct: 121 TVEIEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRESLIQLFQNEKDPIKLIRLREV 180
#
# Query: 181 YEKLEDIADSCQSVANTLESIVMKNA 206
# YEKLEDIADSCQSVANTLESIVMKNA
# Sbjct: 181 YEKLEDIADSCQSVANTLESIVMKNA 206
#
#
# >BS_ykaA
# Length = 205
#
# Score = 186 bits (472), Expect = 3e-47
# Identities = 105/203 (51%), Positives = 147/203 (71%)
#
# Query: 4 KNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIME 63
# + KKD+F+ LL +IA N+ E A +F + + + L F++ +KEYET GD+ VH MI E
# Sbjct: 3 RRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEYETKGDNHVHVMIKE 62
#
# Query: 64 LNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQASTVE 123
# LN AFITPIERED+L+LTN LDDV+D ++ + +EI IT DE++ KF I+ E
# Sbjct: 63 LNKAFITPIEREDILQLTNSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECAKE 122
#
# Query: 124 IEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRESLIQLFQNEKDPIKLIRLREVYEK 183
# I ++L+ + +LKD++ AI+IK+YE CD+++R+SL LF NE DPIK+I+ RE+YE
# Sbjct: 123 ILITIELLAENRLKDIQPHAIKIKEYEHSCDNLHRKSLKNLFGNETDPIKVIQYREIYET 182
#
# Query: 184 LEDIADSCQSVANTLESIVMKNA 206
# LE+IADSCQSVAN LE+I+MKNA
# Sbjct: 183 LEEIADSCQSVANNLETIIMKNA 205
#
#
# >SA0618
# Length = 205
#
# Score = 169 bits (429), Expect = 3e-42
# Identities = 93/204 (45%), Positives = 139/204 (67%)
#
# Query: 3 FKNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIM 62
# F KKD+F L ++ NL A F + N+ DL +S+ IK YE+ GD +VH++I
# Sbjct: 2 FSKKKDKFMVQLEEMVFNLDRAAIEFGKMDFNTHLDLKAYSDNIKTYESHGDELVHQVIT 61
#
# Query: 63 ELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQASTV 122
# +LN FITPIERED+L L + +DDV+DA++ETA E+ I + DEYM +F+ IQ +
# Sbjct: 62 DLNQTFITPIEREDILSLCDAIDDVLDAIEETAAMFEMYSIEYTDEYMAEFVDNIQKAVA 121
#
# Query: 123 EIEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRESLIQLFQNEKDPIKLIRLREVYE 182
# E++ AV L+ DKKL +R +I IK++E+ CD + R+S+ +F +E DPI LI+++++YE
# Sbjct: 122 EMKLAVGLLVDKKLSHMRIHSINIKEFETNCDGILRQSIKHIFNSETDPITLIKIKDIYE 181
#
# Query: 183 KLEDIADSCQSVANTLESIVMKNA 206
# +E+IAD CQ VAN E+I+MKN+
# Sbjct: 182 SMEEIADKCQIVANNFETIIMKNS 205
#
#
# >RSc1312
# Length = 208
#
# Score = 87.8 bits (216), Expect = 2e-17
# Identities = 50/175 (28%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
#
# Query: 33 INSVEDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALD 92
# +N + + + ++ E D + H + L+ FITP++R+++ +L +DD++D ++
# Sbjct: 34 VNDLPNAEMHARNVQNIEKKADRITHDTVELLHKTFITPLDRDEIHKLITTMDDIIDLME 93
#
# Query: 93 ETAFSLEICQITHYDEYMTKFIQAIQASTVEIEKAVDLVFD-KKLKDVRKLAIQIKDYES 151
# + + ++ + +T+ + + + E+ KAV L+ D + + +A +I ES
# Sbjct: 94 DVSLTISLYDVTNVTDEARQLAAFSVSCCEEVRKAVALLDDMNNGRQILTIAQEIDRLES 153
#
# Query: 152 QCDDVYRESLIQLFQNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESIVMKNA 206
# + D V R ++ +LF+ E D LI+L+ +YE+LE I D C+ VAN +E IV++NA
# Sbjct: 154 EADRVMRAAMAKLFRTESDIKLLIKLKAIYEQLESITDRCEDVANIIEGIVLENA 208
#
#
# >CAC3094
# Length = 210
#
# Score = 79.7 bits (195), Expect = 4e-15
# Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
#
# Query: 6 KKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIMELN 65
# K D+F L + + ++E + F Y +N+ ED IK+ E GD H +I ELN
# Sbjct: 7 KDDKFFDLFIENSNTIYETSLLFRDY-VNNPEDSENKLKVIKDMEHKGDHQQHNIINELN 65
#
# Query: 66 DAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQASTVE-- 123
# F+TP +RED+ + +DD++D ++ ++ + + H KF+ + E
# Sbjct: 66 KTFVTPFDREDIYSVATLMDDIIDLMEASSSRFVMFDV-HNTTEEAKFLAELVVKAAEEI 124
#
# Query: 124 IEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRESLIQLFQNEKDP---IKLIRLREV 180
# I + KK K +++ + + E + D +R ++ LF DP + +I+ RE+
# Sbjct: 125 ITLMTEFKNMKKSKKLQECIVNLNKIEEEGDLNFRRAVRILFTEYTDPKDFLHVIKWREI 184
#
# Query: 181 YEKLEDIADSCQSVANTLESIVMKNA 206
# Y+ +E D+C+++AN +E + MKNA
# Sbjct: 185 YQYMERTLDACETLANVIEGVAMKNA 210
#
#
# >SMc02862
# Length = 214
#
# Score = 65.5 bits (158), Expect = 9e-11
# Identities = 47/204 (23%), Positives = 98/204 (48%), Gaps = 5/204 (2%)
#
# Query: 6 KKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIMELN 65
# ++DRF L D + + GA + D+ + ++I E D + ++++ +
# Sbjct: 11 REDRFFDLFADHSRTVM-GAAEALNALLAGGPDIESHCDRIVALENEADEITREVLLAVR 69
#
# Query: 66 DAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQASTVEIE 125
# +FITP +R D+ +L +DD +D + +T ++ + + +D M A+ + +
# Sbjct: 70 RSFITPFDRGDIKDLIQSMDDAIDMMHKTVKTIRLYEQKSFDPGMQAMGAAVVEAAHLVA 129
#
# Query: 126 KAVDLV--FDKKLKDVRKLAIQIKDYESQCDDVYRESLIQLFQNE--KDPIKLIRLREVY 181
# +A+ L+ + +A ++ E + D ++ + L LFQ +P+ I E+Y
# Sbjct: 130 EAIPLLSRIGANAHRLSAIAEEVTHVEDRSDQLHEQGLKDLFQRHGASNPMAYIIGSEIY 189
#
# Query: 182 EKLEDIADSCQSVANTLESIVMKN 205
# +LE + D + VAN + IV++N
# Sbjct: 190 GELEKVVDRFEDVANEISGIVIEN 213
#
#
# >DR0924
# Length = 212
#
# Score = 63.9 bits (154), Expect = 2e-10
# Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
#
# Query: 3 FKNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIM 62
# F +FA+ + A N H A + + D+ ++ ++E GD + ++
# Sbjct: 6 FMPHNPKFAAKFAEAAQNAHATAQALVDL-LENYTDVERKVQRVLDFEHEGDRITSEVTN 64
#
# Query: 63 ELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQASTV 122
# L ++FI P +RED+L L LDD++D ++E A L + +I M + + ++
# Sbjct: 65 LLAESFIVPFDREDILALNAELDDLVDDMEEAASKLSLYRIERPLPQMAQLARVVEQQCA 124
#
# Query: 123 EIEKAVDLVFDKKLKD-VRKLAIQIKDYESQCDDVYRESLIQLFQNEKDPIKLI---RLR 178
# + + + L+ D ++ D +R+L+ +I+ E + D + E L+ + ++I R
# Sbjct: 125 LLAQGMPLIEDGRMVDELRQLSQKIRALEDEGDRISDEVARHLYDGVTEVPQMIVAMRSG 184
#
# Query: 179 EVYEKLEDIADSCQSVANTLESIVMKNA 206
# E+ +E+ +D Q +A T+ESI++KNA
# Sbjct: 185 EILNLIENASDQAQRIARTVESILLKNA 212
#
#
# >mlr8369
# Length = 147
#
# Score = 62.8 bits (151), Expect = 4e-10
# Identities = 41/143 (28%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
#
# Query: 67 AFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQASTVEIEK 126
# +FITP +R D+ +L +DD +D + +T ++++ + +D M + I A+ + +
# Sbjct: 4 SFITPFDRGDIKDLIQSMDDAIDMMHKTVKTVKLFETKEFDPRMQEMGGVIVAAAKLVAE 63
#
# Query: 127 AVDLVFDKKLKDVRKLAI--QIKDYESQCDDVYRESLIQLFQ--NEKDPIKLIRLREVYE 182
# A+ L+ VR AI ++ ES+ DD++ + L LF+ DP+ + E+Y
# Sbjct: 64 AIPLLSKVGTHTVRLNAIAEEVMRVESRADDLHEQGLKDLFKRHGRSDPMAYLIGGEIYG 123
#
# Query: 183 KLEDIADSCQSVANTLESIVMKN 205
# +LE + D + VAN + IV++N
# Sbjct: 124 QLEKVVDRFEDVANEISGIVIEN 146
#
#
# >AGl497
# Length = 214
#
# Score = 56.6 bits (135), Expect = 4e-08
# Identities = 39/173 (22%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
#
# Query: 38 DLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAFS 97
# D+ + I E D + ++++ + +FITP +R D+ +L +DD +D + +T +
# Sbjct: 41 DVEKNCDLIVALENQADDITREVLLAVRRSFITPFDRGDIKDLIQSMDDAIDMMHKTVKT 100
#
# Query: 98 LEICQITHYDEYMTKFIQAIQASTVEIEKAVDLV--FDKKLKDVRKLAIQIKDYESQCDD 155
# + + + + +D M + I + I +A+ L+ + + +A ++ E + DD
# Sbjct: 101 IRLFEQSEFDPLMKEMGHEIVRAAGLIAEAIPLLNKVGANAQRLSAIAEEVTRVEGRSDD 160
#
# Query: 156 VYRESLIQLFQNE---KDPIKLIRLREVYEKLEDIADSCQSVANTLESIVMKN 205
# ++ + L LF+ + + + E+Y +LE + D + VAN + IV++N
# Sbjct: 161 LHDQGLKDLFRRHGANGNAMAYMIGSEIYGELEKVVDRFEDVANEISGIVIEN 213
#
#
# >MTH1689
# Length = 217
#
# Score = 46.6 bits (109), Expect = 4e-05
# Identities = 36/165 (21%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
#
# Query: 46 IKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITH 105
# IKE+E D + KM +E + P +RED + L +D V D ++ AF++ + ++
# Sbjct: 52 IKEHE--ADEIRRKMELEFYEGAFLPFDREDRIMLVESIDKVADVIESAAFTVSLGKVAF 109
#
# Query: 106 YDEYMTKFIQAIQASTVEIEKAVDLV--FDKKLKDVRKLAIQIKDYESQCDDVYRESLIQ 163
# E+ F ++ + I + V + L + + +I+ +E + D + R+ +
# Sbjct: 110 PAEFRDDFRAMMKVTGKTIRALHECVESLETDLGEAMRKVHEIERFEDEADIIERKIITG 169
#
# Query: 164 LF----QNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESIVMK 204
# L+ Q+ +K + ++E+ K+ +I+D + ++ I+ K
# Sbjct: 170 LYSAYRQDRIGVVKFLDMKEITRKVANISDRAEDASDRALIIIAK 214
#
#
# >TM0914
# Length = 213
#
# Score = 40.8 bits (94), Expect = 0.002
# Identities = 39/176 (22%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
#
# Query: 33 INSVEDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALD 92
# + +D+ + + + E+ D + K ME+ P R D+L L +D V + +
# Sbjct: 37 LEDTDDIESLYLRTQRLESEADRLRRKTEMEMYSGAFLPNFRGDLLGLIESVDKVANKAE 96
#
# Query: 93 ETA--FSLEICQITH--YDEYMTKFIQAIQASTVEIEKAVDLVFDKKLKDVRKLAIQIKD 148
# A L+ ++ H D +++ +++A ++ A+ +F+ L+ V + + ++
# Sbjct: 97 YVADLIVLQKPEVPHELKDLILSQMEYSLKAYE-SLKSALKFLFE-DLERVEEFVLAVEK 154
#
# Query: 149 YESQCDDVYRESLIQLFQNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESIVMK 204
# YE D V R +L +LF+ + + + ++E+ + DIAD + V++ E I++K
# Sbjct: 155 YEHDEDAVERTALRKLFEMDIERSVKLEVKELIRSIGDIADRTEDVSDRAEIILLK 210
#
#
# >PM0250
# Length = 226
#
# Score = 38.9 bits (89), Expect = 0.007
# Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
#
# Query: 45 KIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLD-------DVMDALDETAFS 97
# KI E E D++ ++ ++L PI+R D+LEL + D D+ + F+
# Sbjct: 53 KISECERQADTLKREIRLKLPRGLFMPIDRTDLLELVTQQDKLANFAKDISGRMIGRHFA 112
#
# Query: 98 LEICQITHYDEYMTKFIQA-IQASTV--EIEKAVDLVFDKKLKDVRKLAIQ----IKDYE 150
# + +++Y+ + + A IQA V E+E+ ++ F + D+ I I+D
# Sbjct: 113 IPESMQPEFEKYVKRSLDAIIQAHRVIDEMEQLLETGFKGRELDLVNRMINELDAIEDDT 172
#
# Query: 151 SQCDDVYRESLIQLFQNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESIVMKN 205
# Q R+ L+ L ++ +PI ++ L + E + +AD Q V + +E ++ ++
# Sbjct: 173 DQMQIKLRKMLLGL-ESRYNPIDVMFLYKTLEWVGVLADQAQRVGSRIELMLARS 226
#
#
# >VC2441
# Length = 228
#
# Score = 38.9 bits (89), Expect = 0.007
# Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
#
# Query: 26 NFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLD 85
# NFF N E +I E D + ++ ++L P++R DMLEL + D
# Sbjct: 36 NFFEVCNKGDWEKAGEIRAQISHLEKEADVLKREIRLKLPRGLFMPVDRSDMLELLTQQD 95
#
# Query: 86 DVMDALDETAFSLEICQITHYDEYMTKFIQAI--------QASTV--EIEKAVDLVFD-K 134
# + + + A + Q+ + FI + QA V E+++ ++ F +
# Sbjct: 96 KLANLAKDIAGRVYGRQLVIPEPLQENFIAYVRRCLDAANQAQNVINELDELLETGFKGR 155
#
# Query: 135 KLKDVRKLAIQIKDYESQCDDV---YRESLIQLFQNEKDPIKLIRLREVYEKLEDIADSC 191
# ++ V ++ Q+ E D + R+ L+ + +++ +PI ++ L ++ E + IAD
# Sbjct: 156 EVTLVAEMIHQLDVIEDDTDSMQIRLRQQLMAI-ESKMNPIDVMFLYKILEWVGGIADQA 214
#
# Query: 192 QSVANTLESIVMKN 205
# Q V LE ++ ++
# Sbjct: 215 QRVGARLELMLSRS 228
#
#
# >PA5208
# Length = 225
#
# Score = 38.1 bits (87), Expect = 0.013
# Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
#
# Query: 50 ETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETA-----------FSL 98
# E D + + M L + P+ R D+LEL + D V + + A L
# Sbjct: 58 EQEADRLKKHVRMHLPKSLFLPVPRSDLLELLSVQDKVANRAKDIAGLMLGRRMRIPLPL 117
#
# Query: 99 EICQITHYDEYMTKFIQAIQASTVEIEKAVDLVF-DKKLKDVRKLAIQIKDYESQCDDVY 157
# + + + + QA++ E+ + ++ F ++ V + +++ E+ D +
# Sbjct: 118 QGQMLAYVQRSVDASAQALRVVN-ELNELLETGFGGRETSLVESMVEELEAIENDTDRIQ 176
#
# Query: 158 RESLIQLFQNEKD--PIKLIRLREVYEKLEDIADSCQSVANTLESIVMK 204
# E +LF+ E + P+ ++ L ++ E + D+AD Q V N LE ++ +
# Sbjct: 177 VEVRRELFRLESELPPVDVMFLYQIIEWIGDVADRAQRVGNRLEQLLAR 225
#
#
# >MJ0629
# Length = 214
#
# Score = 37.4 bits (85), Expect = 0.021
# Identities = 39/146 (26%), Positives = 69/146 (46%), Gaps = 12/146 (8%)
#
# Query: 32 NINSVEDLHTFSN--------KIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNR 83
# ++ S+E L + N +I + E GD + + L AF+ P R ++
# Sbjct: 30 SLKSIELLKDYMNSKDEKILKEIIKIEEEGDETTKNIRINLEKAFL-PNMRRELSRSAEL 88
#
# Query: 84 LDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQASTVEIEKAVDLVFD--KKLKDVRK 141
# LD+ +D+L A E+ + +DEY+ I + TV++ + +D V D +K D+
# Sbjct: 89 LDETLDSLKHAAMLYELLK-EEFDEYLKNEIDLVLMITVDMFQHLDRVLDVIEKGGDLDP 147
#
# Query: 142 LAIQIKDYESQCDDVYRESLIQLFQN 167
# + +IKD E DDVY+ + + N
# Sbjct: 148 IIKEIKDKEKFIDDVYQNRIYKYLIN 173
#
#
# >HI1603
# Length = 226
#
# Score = 37.4 bits (85), Expect = 0.025
# Identities = 40/192 (20%), Positives = 89/192 (45%), Gaps = 13/192 (6%)
#
# Query: 27 FFATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDD 86
# FF T + E +I + E DS+ ++ ++L PI+R D+LEL + D
# Sbjct: 35 FFQTTFSKNWEQAEEKRLEISQCEREADSLKREIRLKLPRGLFLPIDRTDLLELVTQQDK 94
#
# Query: 87 VMDALDETAFSLEICQITHYDEYMTKFIQAIQASTVEIEKAVDLV--FDKKL------KD 138
# + + + A + Q +E +F+ ++ S I +A ++ DK L ++
# Sbjct: 95 LANYAKDIAGRMIGRQFGIPEEMQEEFLHYVKRSLDAIHQAHRVIEEMDKLLETGFKGRE 154
#
# Query: 139 VRKLAIQIKDYESQCDD-----VYRESLIQLFQNEKDPIKLIRLREVYEKLEDIADSCQS 193
# ++ + I++ +S DD + ++ ++ +PI ++ L ++ E + +AD Q
# Sbjct: 155 LKLVNDMIQELDSIEDDTDQMQIKLRKMLYTIESRYNPIDVMFLYKIIEWVGVLADQAQR 214
#
# Query: 194 VANTLESIVMKN 205
# V + +E ++ ++
# Sbjct: 215 VGSRIELMLARS 226
#
#
# >PH0637
# Length = 226
#
# Score = 36.6 bits (83), Expect = 0.039
# Identities = 39/183 (21%), Positives = 81/183 (43%), Gaps = 17/183 (9%)
#
# Query: 37 EDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAF 96
# E++ ++ K+ + E D + ++ + + P++R D+LE + D + DA ++TA
# Sbjct: 46 ENMKEYAKKVDDLEDIADKIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTAK 105
#
# Query: 97 SLEICQITHYDEYMTKFIQAIQASTVEIEKAVDLVF---------------DKKLKDVRK 141
# L I + + D I E KA LV+ +K++K K
# Sbjct: 106 WLLIKR--NLDSIPNDIKDIILKMGKESIKAAKLVYEAIKQLDNVLESGFAEKEIKKEYK 163
#
# Query: 142 LAIQIKDYESQCDDVYRESLIQLFQNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESI 201
# + QI++ ES+ D + + + +F +E D + + + L +I+D + A + +
# Sbjct: 164 IIKQIEEVESKIDGLDSKLMEIVFTSELDWKDGLYILNIARTLSNISDKAKDTAERIRVL 223
#
# Query: 202 VMK 204
# + K
# Sbjct: 224 MNK 226
#
#
# >STM2559
# Length = 714
#
# Score = 33.9 bits (76), Expect = 0.22
# Identities = 23/72 (31%), Positives = 42/72 (57%), Gaps = 6/72 (8%)
#
# Query: 57 VHKMIMELNDAFITPIEREDMLEL---TNRLDDVMDALDETAFSLEIC-QITHYDEYMTK 112
# +H+ + LN + P +RED+L+L +RL V+ D ++LE+C +I+ +EYM
# Sbjct: 22 LHRALEGLNFRIVYPNDREDLLKLIENNSRLCGVI--FDWDKYNLELCEEISKLNEYMPL 79
#
# Query: 113 FIQAIQASTVEI 124
# + A ST+++
# Sbjct: 80 YAFANSYSTLDV 91
#
#
# >CPn0681
# Length = 224
#
# Score = 33.9 bits (76), Expect = 0.24
# Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 12/140 (8%)
#
# Query: 37 EDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAF 96
# E+L + + + E D + + M L PI R +LE+ + D + D ++ A
# Sbjct: 43 EELLEMAKLVSDKEYQADCIKNDMRNHLPAGLFMPISRAGILEIISIQDSIADTAEDVAI 102
#
# Query: 97 SLEICQITHYDEYMTKFIQAIQASTVEIEKAVDLVFD-----------KKLKDVRKLAIQ 145
# L I ++ Y T F + ++ + E + L+ + +K R L +
# Sbjct: 103 LLTIRRLNFYPSMETLFFRFLEKNLEAFELTMTLLHEFNQLLESSFGGRKADKARLLVGR 162
#
# Query: 146 IKDYESQCDDVYRESLIQLF 165
# + E + D + RE L+Q+F
# Sbjct: 163 VAKSEHESDVLQRE-LMQIF 181
#
#
# >CT691
# Length = 224
#
# Score = 33.5 bits (75), Expect = 0.30
# Identities = 27/152 (17%), Positives = 61/152 (39%), Gaps = 11/152 (7%)
#
# Query: 28 FATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDV 87
# F+ E + + + E D M + + L P+ R +LE+ + D +
# Sbjct: 34 FSALKEGDYERVGVLAQLVSSKERQADGMKNDVRRHLASGVFLPVSRAALLEIISIQDSL 93
#
# Query: 88 MDALDETAFSLEICQITHY----------DEYMTKFIQAIQASTVEIEKAVDLVFDKKLK 137
# D ++ A L + ++ Y + + +A+ + E+++ ++ F
# Sbjct: 94 ADCAEDIAILLTVKELQFYPEFEELFFEFLQKTVQSFEAVAKTIREMDRLLESSFGGNRA 153
#
# Query: 138 D-VRKLAIQIKDYESQCDDVYRESLIQLFQNE 168
# D R L ++ + E +CD + RE + F ++
# Sbjct: 154 DKTRVLVSEVSNLEHECDLLQRELMKVFFSDD 185
#
#
# >PAB0929
# Length = 223
#
# Score = 32.3 bits (72), Expect = 0.75
# Identities = 14/59 (23%), Positives = 32/59 (53%)
#
# Query: 37 EDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETA 95
# E++ ++ K+ + E D + ++ + + P++R D+LE + D + DA ++TA
# Sbjct: 43 EEMKDYAKKVDDLEDVADRIKSELRDSITSKLLMPVQRTDILEYLHMQDKIADAAEDTA 101
#
#
# >BB0220
# Length = 594
#
# Score = 32.0 bits (71), Expect = 0.94
# Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
#
# Query: 57 VHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEIC---QITHYDEYMTKF 113
# V K+IMEL++A E+ M + DD++ + FSLE+C + + +E T
# Sbjct: 518 VKKIIMELSEAR----EKGAMALFGEKYDDLVSVYEIDGFSLEVCGGPHVENTNELGTFK 573
#
# Query: 114 IQAIQASTVEIEKAVDLVFDK 134
# IQ Q+S+ I + ++ D+
# Sbjct: 574 IQKEQSSSSGIRRIKAILIDE 594
#
#
# >MYPU_4080
# Length = 485
#
# Score = 30.8 bits (68), Expect = 2.0
# Identities = 40/184 (21%), Positives = 80/184 (42%), Gaps = 18/184 (9%)
#
# Query: 19 VNLHEGANFFATYNINSVEDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDML 78
# +N +E FF ++ ++ + Y+T +V +LN++ I ++ ++
# Sbjct: 35 LNSYERVLFFRILKTEDAAEIFSYLS----YDTR-KVLVENFTDDLNESIINELKSNEIA 89
#
# Query: 79 EL-----TNRLDDVMDALDETAFSLEICQITHYDEYMTKFIQAIQASTVEIEKAVDLVFD 133
# +L +N ++ V+ ++D + ++ QI YDE I ++ S + E + D
# Sbjct: 90 DLLEEAPSNLINKVLSSIDNSEKRRKVNQILKYDENQVGSIMSVDMSVLWEEMTMREALD 149
#
# Query: 134 KKLKDVRKLAIQIKDYESQCDDVYRESLIQLFQNEKDPIKLIRLREVYEKLEDIADSCQS 193
# K KD RK Q++ Y D + L+ E I + YEK++++ S S
# Sbjct: 150 KIKKD-RKAKAQLEHYFFVVDK--KRKLLGSVALED-----IIFEDPYEKIKNVMFSVNS 201
#
# Query: 194 VANT 197
# + T
# Sbjct: 202 ILTT 205
#
#
# >TVN0064
# Length = 188
#
# Score = 30.8 bits (68), Expect = 2.1
# Identities = 31/172 (18%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
#
# Query: 43 SNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDA-----------L 91
# + ++KE E GD + + ++ I+P +++++L + DD++D
# Sbjct: 12 NEEVKEIEKVGDELNISIKQDITKGGISPNLMDNLIQLVEKSDDILDTSYFISREIKRMF 71
#
# Query: 92 DETAFSLEICQITHYDEYMTKFIQAIQASTVEIEKAVDLVFDKKLKDVRKLAIQIKDYES 151
# + ++ C Y T FI ++ + ++ ++ + +R+ I I+ E
# Sbjct: 72 LDYGRGMDRCSSIIQKCYST-FISMLEYNKGALKHLNAMLTAENDDKIREERIAIEKLEE 130
#
# Query: 152 QCDDVYRESLIQLFQNEKDPIKLI--RLREVYEKLEDIADSCQSVANTLESI 201
# + D++ ++ +++N D L+ L ++ K++D+ D C+ A+ + +I
# Sbjct: 131 KVDELKDDTFDYIYRNADDIPYLVFSHLVDLTHKVDDMLDDCEDAADLIITI 182
#
#
# >CAC0675
# Length = 120
#
# Score = 30.4 bits (67), Expect = 2.5
# Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
#
# Query: 32 NINSVEDLHTFSNKIKEYETAGDSMVHKMI---MELNDAFITPIEREDMLELTNRLDDVM 88
# N ++E+ NK+ ++ T S +I ELN ITP +R D+ R++ +
# Sbjct: 8 NRKAIEEYCCDLNKLSDFLTQYVSSYRLLIGGACELNQ--ITPAKRSDVKHALERVNKLG 65
#
# Query: 89 DALDETAFSLEICQITHYDEY 109
# D +DE +S+E CQ Y EY
# Sbjct: 66 DIIDELIYSIEKCQ-CEYIEY 85
#
#
# >NMB0284
# Length = 456
#
# Score = 30.4 bits (67), Expect = 2.6
# Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
#
# Query: 114 IQAIQASTVEIEKAVDLVFDKKLKDVRKLAI--QIKDYESQCDDVYRESLIQLFQNEKDP 171
# ++AI+A+T KA++ K+ +V ++A + + +D+ S + Q ++
# Sbjct: 81 VKAIEATTNHDVKAIEYWLKKRFAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREA 140
#
# Query: 172 IKLIRLREVYEKLEDIADSCQSV 194
# + L +L E+ EKL +A +V
# Sbjct: 141 VLLPKLAEIIEKLTAMAHDLAAV 163
#
#
# >NMA2203
# Length = 456
#
# Score = 30.4 bits (67), Expect = 2.6
# Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
#
# Query: 114 IQAIQASTVEIEKAVDLVFDKKLKDVRKLAI--QIKDYESQCDDVYRESLIQLFQNEKDP 171
# ++AI+A+T KA++ K+ +V ++A + + +D+ S + Q ++
# Sbjct: 81 VKAIEATTNHDVKAIEYWLKKRFAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREA 140
#
# Query: 172 IKLIRLREVYEKLEDIADSCQSV 194
# + L +L E+ EKL +A +V
# Sbjct: 141 VLLPKLAEIIEKLTAMAHDLAAV 163
#
#
# >SMc02230
# Length = 960
#
# Score = 30.4 bits (67), Expect = 3.1
# Identities = 29/136 (21%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
#
# Query: 38 DLHTFSNKIKEY-ETAGDSMVHKMIMELND--AFITPIERED-MLELTNR---LDDVMDA 90
# D+ S IKE A + + +E +D + + + RED M + NR ++D ++A
# Sbjct: 172 DIERLSAGIKELGRQASPAEADALRIEFDDLRSMLEGLAREDSMRRMENRWTGVEDRLNA 231
#
# Query: 91 LDETAFSLEICQITHYDEYMTKF--------IQAIQASTVEIEKAVDLVFDKKLKDVRKL 142
# D+ + DE + ++ +++ V + +A++++ + D R+L
# Sbjct: 232 FDQNRDDELVALAYRLDEIKAQINSLDRGAGVEVLESKLVAVAQAIEMLGRQIQPDERRL 291
#
# Query: 143 AIQIKDYESQCDDVYR 158
# A Q D + + D++ R
# Sbjct: 292 APQFADLDKRLDEISR 307
#
#
# >TM1652
# Length = 553
#
# Score = 30.0 bits (66), Expect = 3.8
# Identities = 15/53 (28%), Positives = 28/53 (52%)
#
# Query: 36 VEDLHTFSNKIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVM 88
# V D F KI+E++ ++V+ +IM+ I P+ E+ RLD+++
# Sbjct: 222 VADGVVFERKIEEFDEGEKTVVNYLIMDPEKVTIKPVVSENGFGTIERLDEMV 274
#
#
# >AF2149
# Length = 211
#
# Score = 29.6 bits (65), Expect = 5.3
# Identities = 13/48 (27%), Positives = 26/48 (54%)
#
# Query: 48 EYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETA 95
# E E GD++ ++++++ P R D L LD+++D L++ A
# Sbjct: 53 EAEKLGDAIRRDIVLKIHSGAFIPALRSDFCNLAEELDEILDELEDIA 100
#
#
# >PM1132
# Length = 1032
#
# Score = 29.3 bits (64), Expect = 5.7
# Identities = 14/32 (43%), Positives = 24/32 (74%), Gaps = 1/32 (3%)
#
# Query: 173 KLIRLREVYE-KLEDIADSCQSVANTLESIVM 203
# KL+RLR++ + +L +DS ++VAN ES+V+
# Sbjct: 250 KLVRLRDIADVELNKSSDSSRAVANGFESVVL 281
#
#
# >YOR165w
# Length = 776
#
# Score = 28.9 bits (63), Expect = 7.6
# Identities = 26/137 (18%), Positives = 66/137 (47%), Gaps = 13/137 (9%)
#
# Query: 46 IKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQITH 105
# + +Y+ + ME +A T + ++ +++ +++L E + +++
# Sbjct: 344 LTKYDEQASRYARNVYMEKREALNTKLNS----HISGTINEFLESLMEKLWDDLKLEVSS 399
#
# Query: 106 YDEYMTKFIQAIQASTVEIEKAVDLVFDKKLKDVRKLAIQIKDYESQC---DDVYRESLI 162
# D+ T F++++ A +IEK F++ ++ +KL + I + E C DD+ E I
# Sbjct: 400 RDKATTSFVESVAAGKSKIEKE----FNESMETFKKLGLLISNEEITCKFSDDI--EERI 453
#
# Query: 163 QLFQNEKDPIKLIRLRE 179
# + ++ + K+ R+++
# Sbjct: 454 KQLRDAELKAKIGRIKK 470
#
#
# >PAE3187
# Length = 218
#
# Score = 28.9 bits (63), Expect = 8.3
# Identities = 28/163 (17%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
#
# Query: 45 KIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQIT 104
# KI E GD +V ++ + + P +L L + +D+++D + A + +
# Sbjct: 53 KITALEREGDEIVRDVVDRVAQGAVVPTVTNVVLVLLDNVDNILDMIYFAAKEIRRGRHL 112
#
# Query: 105 HYDEYMTKFIQAIQASTVEIEKAV-----DLVFDKKLKDVRKLAIQIKDYESQCDDVYRE 159
# ++ + + A +++ + + ++ K +D+R+ A I E + D++
# Sbjct: 113 WTNDAIYSIVSAELKEMLDLVRTMLEYLQTMIKTNKAEDLRRYARIISSLEEEIDEIKEN 172
#
# Query: 160 SLIQLFQNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESIV 202
# L +++ + ++ + + + IAD+ Q A L ++V
# Sbjct: 173 ILDKVYALSLNAVEFNHIVSLIYTADKIADNIQDAAYHLATVV 215
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.319 0.134 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,343,452
Number of Sequences: 192987
Number of extensions: 768122
Number of successful extensions: 3057
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 2997
Number of HSP's gapped (non-prelim): 95
length of query: 206
length of database: 59,019,183
effective HSP length: 105
effective length of query: 101
effective length of database: 38,755,548
effective search space: 3914310348
effective search space used: 3914310348
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
S2: 63 (28.9 bits)