Soares_NMPu

Library Description

1st strand cDNA was prepared from pregnant mouse uterus, and was then primed with a Not I - oligo(dT) primer. Double-stranded cDNA was ligated to Eco RI adaptors (Pharmacia), digested with Not I and cloned into the Not I and Eco RI sites of the modified pT7T3 vector. Library is normalized. Library was constructed by Bento Soares and M. Fatima Bonaldo.

Source: Marra M/Mouse EST Project, Washington University School of MedicineP

Gene Content Analysis

5,974 ESTs from this library were grouped into 3,901 UniGene entries (putative genes) [UniGene build #178, 06-Feb-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs	TPM		UniGene Entry
2	335		Mm.457984	Prolactin family 2, subfamily c, member 3.
2	335		Mm.457980	Major urinary protein 1.
2	335		Mm.45580	Aquaporin 5.
2	335		Mm.45565	Transcribed locus.
2	335		Mm.45539	Coiled-coil domain containing 132.
2	335		Mm.454219	Tenascin C.
2	335		Mm.4533	Apolipoprotein A-IV.
2	335		Mm.45060	Beta 1,3-galactosyltransferase-like.
2	335		Mm.45044	Serum response factor.
2	335		Mm.44630	Lipocalin 13.
2	335		Mm.4462	SH3-domain binding protein 1.
2	335		Mm.4454	ELK3, member of ETS oncogene family.
2	335		Mm.444377	Transcribed locus.
2	335		Mm.442545	Transcribed locus.
2	335		Mm.442517	Transcribed locus.
2	335		Mm.442441	RALBP1 associated Eps domain containing protein 2.
2	335		Mm.442438	Transcribed locus.
2	335		Mm.442108	Peptidyl arginine deiminase, type I.
2	335		Mm.44202	Yip1 interacting factor homolog A (S. cerevisiae).
2	335		Mm.441992	RIKEN cDNA 1500015A07 gene.
2	335		Mm.441714	Transcribed locus.
2	335		Mm.441522	Glucosamine-6-phosphate deaminase 1.
2	335		Mm.441439	E74-like factor 3.
2	335		Mm.441324	Transcribed locus, moderately similar to NP_666343.1 zinc finger protein 825 [Mus musculus].
2	335		Mm.441316	Transcribed locus, strongly similar to NP_038632.1 metaxin 1 [Mus musculus].
2	335		Mm.440764	Microfibrillar-associated protein 1A.
2	335		Mm.440702	Zinc finger E-box binding homeobox 2.
2	335		Mm.440699	Transcribed locus.
2	335		Mm.440378	RNA binding motif protein 4B.
2	335		Mm.440257	RIKEN cDNA 4933439C10 gene.
2	335		Mm.440216	Luc7 homolog (S. cerevisiae)-like.
2	335		Mm.440170	Occludin/ELL domain containing 1.
2	335		Mm.440146	Transcribed locus.
2	335		Mm.440114	Transcribed locus.
2	335		Mm.440071	RIKEN cDNA 0610006I08 gene.
2	335		Mm.440063	DDRGK domain containing 1.
2	335		Mm.440025	Transcribed locus, weakly similar to XP_001473904.1 PREDICTED: hypothetical protein [Mus musculus].
2	335		Mm.439974	Acetoacetyl-CoA synthetase.
2	335		Mm.439957	Complement component 1, q subcomponent, alpha polypeptide.
2	335		Mm.439922	RIKEN cDNA 0610031J06 gene.
2	335		Mm.439919	CutA divalent cation tolerance homolog (E. coli).
2	335		Mm.439861	Transcribed locus, strongly similar to XP_001233127.1 PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Gallus gallus].
2	335		Mm.439806	Transmembrane protein 185B.
2	335		Mm.439800	Nucleoporin 98.
2	335		Mm.439782	Calpain, small subunit 1.
2	335		Mm.439714	A disintegrin and metallopeptidase domain 12 (meltrin alpha).
2	335		Mm.439702	Non-metastatic cells 1, protein (NM23A) expressed in.
2	335		Mm.439690	Tubulin, alpha 1A.
2	335		Mm.439669	Galactose-1-phosphate uridyl transferase.
2	335		Mm.43778	Ribosomal protein S14.
2	335		Mm.4356	Calponin 1.
2	335		Mm.435546	WD repeat domain 20a.
2	335		Mm.4336	Exostoses (multiple) 2.
2	335		Mm.43358	Pre B-cell leukemia transcription factor 1.
2	335		Mm.431947	Oviductal glycoprotein 1.
2	335		Mm.431314	Transcribed locus, strongly similar to NP_058848.1 ribosomal protein S17 [Rattus norvegicus].
2	335		Mm.43081	Mitogen-activated protein kinase 8 interacting protein 3.
2	335		Mm.4292	Kruppel-like factor 10.
2	335		Mm.426637	Translin.
2	335		Mm.426226	Transcribed locus, strongly similar to NP_037098.1 heat shock 10 kDa protein 1 [Rattus norvegicus].
2	335		Mm.426078	Gene model 967, (NCBI).
2	335		Mm.425747	TRNA methyltransferase 61 homolog A (S. cerevisiae).
2	335		Mm.425473	Predicted gene, 100042856.
2	335		Mm.425279	Transmembrane emp24 domain trafficking protein 2.
2	335		Mm.424	ATPase, Na+/K+ transporting, beta 3 polypeptide.
2	335		Mm.422979	Heterogeneous nuclear ribonucleoprotein F.
2	335		Mm.422886	Histocompatibility 2, K1, K region.
2	335		Mm.422680	Histone cluster 2, H3c1.
2	335		Mm.42247	RNA binding motif, single stranded interacting protein 2.
2	335		Mm.4219	Mannosidase 2, alpha B1.
2	335		Mm.42126	MAP kinase-interacting serine/threonine kinase 2.
2	335		Mm.42102	Tubby like protein 1.
2	335		Mm.42080	Kallikrein related-peptidase 4 (prostase, enamel matrix, prostate).
2	335		Mm.41890	Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
2	335		Mm.41780	Guanine nucleotide binding protein (G protein), gamma 10.
2	335		Mm.41735	Ubiquitin-like 7 (bone marrow stromal cell-derived).
2	335		Mm.41687	COMM domain containing 4.
2	335		Mm.41642	Regulator of G-protein signaling 4.
2	335		Mm.41464	RIKEN cDNA 2310003C23 gene.
2	335		Mm.41453	Vacuolar protein sorting 36 (yeast).
2	335		Mm.41438	Ubiquitin-conjugating enzyme E2Q (putative) 1.
2	335		Mm.4141	Very low density lipoprotein receptor.
2	335		Mm.413163	Transcribed locus, moderately similar to NP_065628.1 WD repeat domain 46 [Mus musculus].
2	335		Mm.41272	Receptor accessory protein 3.
2	335		Mm.411740	Transcribed locus.
2	335		Mm.410189	Thioredoxin interacting protein.
2	335		Mm.40989	Hyaluronic acid binding protein 4.
2	335		Mm.407497	Transcribed locus.
2	335		Mm.4071	Ribosomal protein SA.
2	335		Mm.406828	Transcribed locus.
2	335		Mm.404761	Jumonji, AT rich interactive domain 1A (Rbp2 like).
2	335		Mm.40312	Potassium voltage gated channel, Shaw-related subfamily, member 3.
2	335		Mm.402673	Transcribed locus, strongly similar to XP_285515.3 PREDICTED: hypothetical protein [Mus musculus].
2	335		Mm.402671	Transcribed locus.
2	335		Mm.402215	Solute carrier family 30 (zinc transporter), member 5.
2	335		Mm.400464	Coatomer protein complex, subunit beta 2 (beta prime).
2	335		Mm.400	Cytochrome c oxidase, subunit VIb polypeptide 1.
2	335		Mm.40	COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana).
2	335		Mm.399829	Ribosomal protein S3A.
2	335		Mm.3986	Growth hormone receptor.

Source: NCBI UniGene

EST Sequences

6,589 EST sequences from this library have been submitted to the public sequence database as of 06-Feb-2009.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

• uterus
• adult
• female
• normalized
• normal

Source: NCBI Clone Registry