rs# on all gene models to Batch Query all rs# to file.   Gene Model (mRNA alignment) information from genome sequence Total gene model (contig mRNA transcript): 1 mrna transcript protein mrna orientation Contig Contig Label List SNP NM_001013397.1 minus strand NP_001013415.1 reverse NW_001471505.1 Gallus_gallus-2.1 <- currently shown Include clinically associated in gene region cSNP has frequency double hit gene model (contig mRNA transcript): Contig Label Contig mrna protein mrna orientation transcript snp count Gallus_gallus-2.1 NW_001471505.1 NM_001013397.1 NP_001013415.1 reverse minus strand 15, coding Region Contig position mRNA pos dbSNP rs# cluster id Hetero- zygosity Validation 3D Clinically Associated Function dbSNP allele Protein residue Codon pos Amino acid pos PubMed 482644 5806 rs15035556 0.500 missense A Ile [I] 1 1930 contig reference T Phe [F] 1 1930 483933 5253 rs15035576 0.500 synonymous A Glu [E] 3 1745 contig reference G Glu [E] 3 1745 483954 5232 rs15035577 0.500 synonymous G Ala [A] 3 1738 contig reference C Ala [A] 3 1738 483955 5231 rs15035578 0.500 missense T Val [V] 2 1738 contig reference C Ala [A] 2 1738 483960 5226 rs15035579 0.500 synonymous T Asp [D] 3 1736 contig reference C Asp [D] 3 1736 483971 5215 rs15035580 0.500 synonymous T Leu [L] 1 1733 contig reference C Leu [L] 1 1733 483972 5214 rs15035581 0.500 synonymous G Lys [K] 3 1732 contig reference A Lys [K] 3 1732 485012 4866 rs15035583 0.500 synonymous G Arg [R] 3 1616 contig reference A Arg [R] 3 1616 485015 4863 rs15035584 0.500 synonymous G Leu [L] 3 1615 contig reference T Leu [L] 3 1615 485021 4857 rs15035585 0.500 synonymous G Glu [E] 3 1613 contig reference A Glu [E] 3 1613 487395 3837 rs15035589 0.500 synonymous C Ile [I] 3 1273 contig reference A Ile [I] 3 1273 494305 1257 rs15809578 0.500 synonymous T Tyr [Y] 3 413 contig reference C Tyr [Y] 3 413 495695 1056 rs14105641 0.500 synonymous T Ala [A] 3 346 contig reference C Ala [A] 3 346 498689 486 rs15809609 0.500 synonymous C Ile [I] 3 156 contig reference T Ile [I] 3 156 498699 476 rs15809610 0.500 frame shift - 2 153 contig reference C Pro [P] 2 153 exon_1 start codon 1

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Revised: May 25, 2006 1:38 PM .