S100 calcium binding protein A11 (calgizzarin) (S100a11)

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UGID:881638 UniGene Mm.280038 Mus musculus (mouse) S100a11

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S100 calcium binding protein A11 (calgizzarin) (S100a11)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_058020.1	S100 calcium binding protein A11 (calizzarin)	M. musculus	100.0	97
NP_005611.1	S100 calcium binding protein A11	H. sapiens	89.2	102
NP_998168.1	hypothetical protein LOC406276	D. rerio	49.5	95

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	embryonic tissue; tongue; thyroid; intestine; testis; uterus; liver; lymph node; muscle; kidney; pancreas; eye; prostate; mixed; mammary gland; skin; uncharacterized tissue; stomach; extraembryonic tissue; molar; joint; heart; spleen; salivary gland; inner ear; brain; lung

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	3
Map position:	3 E-F
UniSTS entry:	Chr 18	S100a11
UniSTS entry:	Chr 9	(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC086903.1	Mus musculus S100 calcium binding protein A11 (calgizzarin), mRNA (cDNA clone MGC:107585 IMAGE:6764162), complete cds	PA
AK164352.1	Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130064D04 product:S100 calcium binding protein A11 (calizzarin), full insert sequence	P
U41341.1	Mus musculus endothelial monocyte-activating polypeptide I mRNA, complete cds	P
AK003889.1	Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110021C22 product:S100 calcium binding protein A11, full insert sequence	P
BC021916.1	Mus musculus S100 calcium binding protein A11 (calgizzarin), mRNA (cDNA clone MGC:27685 IMAGE:4913795), complete cds	PA
NM_016740.3	Mus musculus S100 calcium binding protein A11 (calgizzarin) (S100a11), mRNA	P

EST sequences (10 of 210) [Show all sequences]

BY082624.1	Clone K630039A09	mixed	5' read	P
BY093368.1	Clone K630095M24	mixed	5' read	P
BY093382.1	Clone K630095O07	embryonic tissue	5' read	P
BY347924.1	Clone L830004K03	joint	5' read	P
BY348891.1	Clone L830009L15	joint	5' read	P
BY352473.1	Clone L830029O17	joint	5' read	P
BY439370.1	Clone I920161O07	extraembryonic tissue	3' read	P
BY551034.1	Clone F730217J11	skin	3' read	A
BY552659.1	Clone F730225P15	skin	3' read	PA
BY703008.1	Clone 0610010K10	kidney	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria