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pfam07055: scADH 
Short-chain alcohol dehydrogenase. This family contains a number of bacterial short-chain alcohol dehydrogenases that are approximately 400 residues long. Alcohol dehydrogenases display a wide variety of substrate specificities, and play an important role in a broad range of physiological processes. Short-chain alcohol dehydrogenases form part of a group of alcohol dehydrogenases that are dependent upon NADP.
Statistics
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PSSM-Id: 70516
View PSSM: pfam07055
Aligned: 10 rows
Created: 8-Jan-2008
Updated: 9-Jan-2008
Structure
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Aligned Rows:
pfam07055 is not assigned to any domain superfamily.
Sequence Alignment?
Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62287996   2 AIIHPK-VRGFICTTTHPKGCELNVRDQIEATRKLGVREDGPKKVLVIGASSGYGLAARITAAFGFK-ADTLGVFFEKPG 79
gi 62287993   1 MIIHPK-TRGFICTTTHPVGCEYNVLEQIQSTRARGVRSNGPKKVVVIGASSGYGLATRISAAFGFG-ADTLGVFFEKPG 78
gi 62287995   1 MIIKPR-IRGFICTTTHPVGCEANVKEQIAYTKAQGPIKNAPKRVLVVGASSGYGLSSRIAAAFGGG-ASTIGVFFEKEG 78
gi 62288004   1 MIIKPR-VRGFICVTTHPAGCEANVKQQIDYVEAKGPVVNGPKKVLVIGSSTGYGLAARITAAFGSG-ADTLGVFFERPG 78
gi 62288002   1 MIIKPR-VRGFICVTAHPTGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCG-ADTLGVFFERPG 78
gi 62288001   1 MIVEPK-FRGFICTTSHPIGCKKNVENQIEYVKENGKI-EGAKRVLVLGASTGYGLASAIVASEACD-AEVLGVSFEREA 77
gi 62287954   1 MIVKAKfVKGFI-RDVHPYGCRREVLNQIDYCKKAIGF-RGPKKVLIVGASSGFGLATRISVAFGGPeAHTIGVSYETGA 78
gi 62287994   1 MRIEPL-IQGVVARSAHPYGCHASIKEQIEYVKKAPKIKSGPKRVLIIGASSGFGLAARIALTFGGAeADTIGVSFERGP 79
gi 62287998   1 MRIEPI-IQGVVARSAHPFGCEAAIKKQIAFVKNAPQISQGPKRVLILGASSGFGLAARIALTFGGAqADTIGVSFERGP 79
gi 62288005   1 MHIKPI-IQGVVARSAHPYGCEQAVLQQIQYVKQANPIKSGPKRVLILGASSGFGLAARIALTFGGAqADTIGVSFERAP 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62287996  80 TETKAGTAGWYNAAAFDKFAKAEGLYSKSINGDAFSDEARAKVIELIKNEMGGKVDLVIYSLASPVRKLP-QTG----EV 154
gi 62287993  79 TEKKPGTAGWYNAAAFDKSAKNAGLYSRSINGDAFSDEMRAKVIEIIKSEMGGHVDLVVYSLASPLRKMP-STG----EI 153
gi 62287995  79 TEKKPGTAGFYNAAAFEKLAREEGLYAKSLNGDAFSNEAKQKTIDLIKEDLG-QVDMVVYSLASPVRKMP-ETG----EL 152
gi 62288004  79 SESKPGTAGWYNSAAFEKFAHEKGLYARSINGDAFSDEVKRLTIETIKRDLG-KVDLVVYSLAAPRRTHP-KSG----EV 152
gi 62288002  79 EEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLG-QVDQVIYSLASPRRTHP-KTG----EV 152
gi 62288001  78 KGKRTASAGWYNIESLKKFVEGEGKKFISVNGDAFSNEVKSEVIDLIKENMG-KVDLVIYSLAAPKRKDP-VSG----EV 151
gi 62287954  79 TDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEF-GKIDLFVYSLAAPRRKDY-KTG----NV 152
gi 62287994  80 SEKGVGSAGWYNNIFFKQEATHAGRTAINIVGDAFSDSVRNEVIEAIETYFEGEVDLVIYSLAAGVRPKP-HSD----TF 154
gi 62287998  80 SEKGTGSAGWYNNVFFKREAEKEGRIAINIVGDAFASETRTQVIEAIETYFEGEVDLVIYSLATGMRPISnQPG----EF 155
gi 62288005  80 SETQTGSAGYYNNLFFKQHAEQAGRIAVNLEGDVFSVDMREQVIEAIETYFEGEVDLIIYSIASGMRRKP-RSEkadpEF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62287996 155 IRSALKPIGQPYKSTAIDTNKDTIIEASIEPATEQEIADTVTVMGGQDWQLWIDALAGANVLAEGARTVAFSYIGSDITW 234
gi 62287993 154 KRSVLKPIGVAHTSNAIDTNKDQIIQATVEPATEQEIADTVAVMGGQDWELWINALAQADVLAPQTRTVAFSYIGTEITW 233
gi 62287995 153 IRSALKPIGETYTSTAVDTNKDVIIEASVEPATEEEIKDTVTVMGGEDWELWINALSDAGVLAEGCKTVAYSYIGTELTW 232
gi 62288004 153 FSSTLKPIGKSVSFRGLDTDKEVIKDVVLEAASDQEVADTVAVMGGEDWQMWIDALLEADVLADGAKTTAFTYLGEKITH 232
gi 62288002 153 FNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH 232
gi 62288001 152 YSSCLKTVGAPFTSKTLDFHTGEIQNITINPATEEEIEGTRKVMGGEDWMLWIEALKEANVLENGVKTIAYSYIGPEVTY 231
gi 62287954 153 YTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY 232
gi 62287994 155 WRSVIKPIGESVTGASILLENDQWVETTLEPATEEEAEATIKVMGGEDWESWIDTLINTESVAQGCKTIAFSYMGPEVTH 234
gi 62287998 156 WRSVIKPFGQTVTGASFDLEHDRWIDTTLESATEEEALHTIKVMGGEDWESWIDTLINAESIAQGCQTIAFSYVGPEITH 235
gi 62288005 159 WRSAIKPIGEAVSGATLLLENDTWIETTLQPASEEEIEGTLRVMGGDDWENWIDTLINAESLAEGCKTIAFSYMGPDVTH 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62287996 235 PIYWHGALGQAKQDLDETALRLNQKLAGeVKGG-ANVAVLKSVVTQASSAIPVMPLYLSMVFKIMQEKGVHEGTQDQLDR 313
gi 62287993 234 PIYWHGALGKAKADLDATSRRLDARLQF-LGGG-ANVAVLKSVVTQASAAIPALPLYIAIVFKVMKEKGLHEGTIEQADR 311
gi 62287995 233 PIYWDGALGKAKMDLDRAAKALNEKLGA-TGGS-ANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGVHEGCMEQIYR 310
gi 62288004 233 DIYWNGSIGAAKKDLDQKVLGIRDKLAP-LGGD-ARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEQGTHEGCIEQVDG 310
gi 62288002 233 DIYWNGSIGAAKKDLDQKVLAIRESLAA-HGGGdARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYS 311
gi 62288001 232 PIYREGTIGRAKNDLEKTAGEITKVLKS-LNGE-GYISVNKALVTQASSAIPIVSLYISILYKVMKEKGTHEGCIEQIYR 309
gi 62287954 233 KIYREGTIGIAKKDLEDKAKLINEKLNRvIGGR-AFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIER 311
gi 62287994 235 PIYLDGTLGRAKIDLHQTSHALNLKLAN-FDGG-AYATVCKALVTKASVFIPALSPYLLALYRVMKEKGTHERCIEQMQR 312
gi 62287998 236 PIYLDGTLGRAKIDLHQTSHSLNLKLAN-FDGA-AYATVCKALVTKASVFIPALSPYLLALYRVMKDEKCHEGCIEQMQR 313
gi 62288005 239 PIYLDGTLGRAKIDLHQTSHALNLKLAN-FDGG-AYAVVCKALVTKASVFIPGLSPYLLALYQVMKNKGTHEGCIEQMQR 316
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 62287996 314 MYRDRMYRTDgaPAEVDEKGRLRLDDWELRDDVQNACKALWPQVTTENLFELTDYAGYKKQFLNLFGFERADVDYDKDV 392
gi 62287993 312 LLRERLYREDgqPAAIDEEHRLRLDDWELREDVQAACKVIWEQVTNENLFQLTDYANYKRDFLKLFGFERADVDYDADV 390
gi 62287995 311 MFSQRLYKEDgsAAEVDDMNRLRLDDWELREDIQQHCRELWPQITTENLKELTDYVEYKEEFLKLFGFGVEGVDYEADV 389
gi 62288004 311 LYRESLYg---aEPRLDEEGRLRADYKELQPEVQSRVEELWDKVTNENLYELTDFAGYKSEFLNLFGFEVAGVDYEQDV 386
gi 62288002 312 LYKDSLCg---dSPHMDQEGRLRADYKELDPEVQNQVQQLWDQVTNDNIYQLTDFVGYKSEFLNLFGFGIDGVDYDADV 387
gi 62288001 310 MFKE-LYEG---NLNLDSENRIRIDDLEMAEDVQKAIEEIWPQITSENVFELSDAEDFKKEFFKLFGFGLEGVDYSEDV 384
gi 62287954 312 MFSEKIYSNE--KIQFDDKGRLRMDDLELRKDVQDEVDRIWSNITPENFKELSDYKGYKKEFMNLNGFDLDGVDYSKDL 388
gi 62287994 313 LFTTKLYDQP--KVPVDGERLIRIDDLELDPQTQAEVSHLLEQMNTENFKECGDYQGFKDEFMKLNGFNFDDVDYSQDI 389
gi 62287998 314 LFATKLYGQD--HISVDGERLVRMDDWELAPHIQNKVNQILEEMDANNFQVIGDYQGFKNEFLQLNGFGFDEVDYSQDI 390
gi 62288005 317 LFSDKLYGHS--RIPLDSERLIRMDDWEMNPDTQVQVRERLQQMNASNFQQLGDYAGFKREFMQLNGFEFDQIDYSQSV 393
Citing CDD
Marchler-Bauer A, Anderson JB, Derbyshire MK, DeWeese-Scott C, Gonzales NR, Gwadz M, Hao L, He S, Hurwitz DI, Jackson JD, Ke Z, Krylov D, Lanczycki CJ, Liebert CA, Liu C, Lu F, Lu S, Marchler GH, Mullokandov M, Song JS, Thanki N, Yamashita RA, Yin JJ, Zhang D, Bryant SH. (2007) CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 35: D237-40
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