Vibrio cholerae O1 biovar eltor str. N16961 chromosome II

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220303-220402 (1-100) 220403-220502 (101-200) 220503-220602 (201-300) 220603-220702 (301-400) 220703-220802 (401-500)
220803-220902 (501-600) [220903-221002 (601-700)] 221003-221102 (701-800) 221103-221202 (801-900) 221203-221302 (901-1000)
221303-221395 (1001-1093)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220903 hypothetical VCA0613 hypothetical protein
identified by Glimmer2; putative
genbank 15601371 NP_233002.1 37 547882 547995
220904 hypothetical VCA0614 formate--tetrahydrofolate ligase
similar to GB:J02911 SP:P21164 PID:144816; identified by sequence similarity; putative
genbank 15601372 NP_233003.1 599 548029 549828
220905 hypothetical VCA0615 bifunctional methionine sulfoxide reductase A/B protein
this fusion consists of methionine sulfoxide A reductase at the N-terminus and B at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion
genbank 15601373 NP_233004.1 394 549956 551140
220906 folE hypothetical VCA0616 GTP cyclohydrolase I
involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
genbank 15601374 NP_233005.1 230 551233 551925
220907 hypothetical VCA0617 molybdopterin biosynthesis MoeA protein
similar to GB:M21151 SP:P12281 PID:145539 GB:U00096 PID:1651376; identified by sequence similarity; putative
genbank 15601375 NP_233006.1 435 551966 553273
220908 hypothetical VCA0618 molybdopterin biosynthesis protein MoeB
ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
genbank 15601376 NP_233007.1 254 553276 554040
220909 hypothetical VCA0619 hypothetical protein
identified by Glimmer2; putative
genbank 15601377 NP_233008.1 122 554224 554592
220910 hypothetical VCA0620 thiosulfate sulfurtransferase SseA, putative
similar to SP:P31142 GB:U00096 PID:1788869 PID:1799924; identified by sequence similarity; putative
genbank 15601378 NP_233009.1 276 554614 555444
220911 hypothetical VCA0621 transcriptional regulator, SorC family
similar to SP:P39140 PID:558556 PID:1408505 GB:AL009126; identified by sequence similarity; putative
genbank 15601379 NP_233010.1 331 555529 556524
220912 hypothetical VCA0622 hypothetical protein
identified by Glimmer2; putative
genbank 15601380 NP_233011.1 36 556523 556633
220913 hypothetical VCA0623 transaldolase
Maintains the balance of metabolites in the pentose-phosphate pathway
genbank 15601381 NP_233012.1 316 557117 558067
220914 hypothetical VCA0624 transketolase
catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyxeraldehyde 3-phosphate
genbank 15601382 NP_233013.1 680 558116 560158
220915 hypothetical VCA0625 TonB receptor-related protein
similar to PID:1638846; identified by sequence similarity; putative
genbank 15601383 NP_233014.1 784 560275 562629
220916 hypothetical VCA0626 hypothetical protein
identified by Glimmer2; putative
genbank 15601384 NP_233015.1 34 562599 562703
220917 hypothetical VCA0627 rRNA methylase, putative
similar to GP:3328978; identified by sequence similarity; putative
genbank 15601385 NP_233016.1 170 562843 563355
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220918 hypothetical VCA0628 SecA-related protein
similar to GB:X79725 SP:P47994 PID:499335; identified by sequence similarity; putative
genbank 15601386 NP_233017.1 724 563793 565967
220919 hypothetical VCA0629 hypothetical protein
identified by Glimmer2; putative
genbank 15601387 NP_233018.1 346 566238 567278
220920 hypothetical VCA0630 D-3-phosphoglycerate dehydrogenase-related protein
similar to GB:Pyro_h; identified by sequence similarity; putative
genbank 15601388 NP_233019.1 323 567291 568262
220921 hypothetical VCA0631 hypothetical protein
identified by Glimmer2; putative
genbank 15601389 NP_233020.1 171 568278 568793
220922 hypothetical VCA0632 MutT/nudix family protein
similar to GB:U00096 PID:1742868 PID:1788056; identified by sequence similarity; putative
genbank 15601390 NP_233021.1 149 568826 569275
220923 hypothetical VCA0633 glpM protein
similar to GB:L06231 PID:1066871 SP:P52112; identified by sequence similarity; putative
genbank 15601391 NP_233022.1 116 569315 569665
220924 hypothetical VCA0634 hypothetical protein
identified by Glimmer2; putative
genbank 15601392 NP_233023.1 241 569857 570582
220925 hypothetical VCA0635 transcriptional regulator, LysR family
similar to GB:U00096 PID:1788100; identified by sequence similarity; putative
genbank 15601393 NP_233024.1 313 570592 571533
220926 hypothetical VCA0636 hypothetical protein
identified by Glimmer2; putative
genbank 15601394 NP_233025.1 96 571530 571820
220927 hypothetical VCA0637 oxygen-insensitive NAD(P)H nitroreductase
similar to GB:M63808 SP:Q01234 PID:148362; identified by sequence similarity; putative
genbank 15601395 NP_233026.1 217 571824 572477
220928 hypothetical VCA0638 transporter, AcrB/D/F family
similar to GB:AE000657; identified by sequence similarity; putative
genbank 15601396 NP_233027.1 1067 572693 575896
220929 hypothetical VCA0639 AcrA/AcrE family protein
similar to GB:AE000657; identified by sequence similarity; putative
genbank 15601397 NP_233028.1 334 575853 576857
220930 hypothetical VCA0640 hypothetical protein
identified by Glimmer2; putative
genbank 15601398 NP_233029.1 154 576967 577431
220931 hypothetical VCA0641 hypothetical protein
identified by Glimmer2; putative
genbank 15601399 NP_233030.1 139 577436 577855
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220932 hypothetical VCA0642 transcriptional regulator, ArsR family
similar to GB:X66866 PID:403332 SP:P52695; identified by sequence similarity; putative
genbank 15601400 NP_233031.1 105 577872 578189
220933 hypothetical VCA0643 hypothetical protein
identified by Glimmer2; putative
genbank 15601401 NP_233032.1 88 578263 578529
220934 hypothetical VCA0644 NADH oxidase, putative
similar to GB:AE000782; identified by sequence similarity; putative
genbank 15601402 NP_233033.1 567 578595 580298
220935 hypothetical VCA0645 hypothetical protein
identified by Glimmer2; putative
genbank 15601403 NP_233034.1 126 580391 580771
220936 hypothetical VCA0646 conserved hypothetical protein/hemolysin, putative
identified by Glimmer2; putative
genbank 15601404 NP_233035.1 605 580887 582704
220937 hypothetical VCA0647 hypothetical protein
identified by Glimmer2; putative
genbank 15601405 NP_233036.1 148 582629 583075
220938 hypothetical VCA0648 hypothetical protein
identified by Glimmer2; putative
genbank 15601406 NP_233037.1 248 583086 583832
220939 hypothetical VCA0649 hypothetical protein
identified by Glimmer2; putative
genbank 15601407 NP_233038.1 180 583832 584374
220940 hypothetical VCA0650 hypothetical protein
identified by Glimmer2; putative
genbank 15601408 NP_233039.1 378 584463 585599
220941 hypothetical VCA0651 hypothetical protein
identified by Glimmer2; putative
genbank 15601409 NP_233040.1 193 585596 586177
220942 hypothetical VCA0652 hypothetical protein
identified by Glimmer2; putative
genbank 15601410 NP_233041.1 145 586449 586886
220943 hypothetical VCA0653 PTS system, sucrose-specific IIBC component
similar to GB:M76768 SP:P22825 PID:155262; identified by sequence similarity; putative
genbank 15601411 NP_233042.1 479 587052 588491
220944 hypothetical VCA0654 sucrose operon repressor ScrR, putative
similar to GB:L14685 PID:289864; identified by sequence similarity; putative
genbank 15601412 NP_233043.1 330 588792 589784
220945 hypothetical VCA0655 sucrose-6-phosphate dehydrogenase
similar to GB:M74035 PID:155269; identified by sequence similarity; putative
genbank 15601413 NP_233044.1 548 589860 591506
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220946 hypothetical VCA0656 aminoimidazole riboside kinase
phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least
genbank 15601414 NP_233045.1 323 591628 592599
220947 hypothetical VCA0657 aerobic glycerol-3-phosphate dehydrogenase
similar to SP:P13035 GB:M21277 GB:M55989 GB:M96795 PID:146181; identified by sequence similarity; putative
genbank 15601415 NP_233046.1 512 592946 594484
220948 hypothetical VCA0658 methyl-accepting chemotaxis protein
similar to GB:X61367 PID:48195; identified by sequence similarity; putative
genbank 15601416 NP_233047.1 536 594586 596196
220949 hypothetical VCA0659 protein F-related protein
similar to PID:2062640; identified by sequence similarity; putative
genbank 15601417 NP_233048.1 207 596382 597005
220950 hypothetical VCA0660 hypothetical protein
identified by Glimmer2; putative
genbank 15601418 NP_233049.1 40 597006 597128
220951 hypothetical VCA0661 peptidyl-prolyl cis-trans isomerase-related protein
similar to GB:U14003 SP:P39311 PID:537048 GB:U00096 PID:1790652; identified by sequence similarity; putative
genbank 15601419 NP_233050.1 157 597218 597691
220952 hypothetical VCA0662 CbbY family protein
similar to GB:U00096 PID:1789046; identified by sequence similarity; putative
genbank 15601420 NP_233051.1 212 597772 598410
220953 hypothetical VCA0663 methyl-accepting chemotaxis protein
similar to PID:1255679; identified by sequence similarity; putative
genbank 15601421 NP_233052.1 587 598557 600320
220954 hypothetical VCA0664 hypothetical protein
identified by Glimmer2; putative
genbank 15601422 NP_233053.1 62 600261 600449
220955 hypothetical VCA0665 C4-dicarboxylate transporter, anaerobic
similar to GB:U00096 SP:Q47134 PID:1429374 PID:1778538 PID:1786839; identified by sequence similarity; putative
genbank 15601423 NP_233054.1 459 600714 602093
220956 hypothetical VCA0666 L-serine dehydratase 1
similar to GB:M28695 SP:P16095 PID:290464 GB:U00096 PID:1736451; identified by sequence similarity; putative
genbank 15601424 NP_233055.1 476 602191 603621
220957 hypothetical VCA0667 sodium/solute symporter
similar to PID:1653432; identified by sequence similarity; putative
genbank 15601425 NP_233056.1 513 603572 605113
220958 hypothetical VCA0668 hypothetical protein
identified by Glimmer2; putative
genbank 15601426 NP_233057.1 35 605152 605259
220959 hypothetical VCA0669 sugar transporter family protein
similar to SP:P41036 PID:606163 PID:639470 GB:U00096 PID:1789618; identified by sequence similarity; putative
genbank 15601427 NP_233058.1 431 605452 606747
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220960 hypothetical VCA0670 hypothetical protein
identified by Glimmer2; putative
genbank 15601428 NP_233059.1 51 606706 606861
220961 hypothetical VCA0671 hypothetical protein
identified by Glimmer2; putative
genbank 15601429 NP_233060.1 338 606844 607860
220962 hypothetical VCA0672 hypothetical protein
identified by Glimmer2; putative
genbank 15601430 NP_233061.1 36 607960 608070
220963 hypothetical VCA0673 transcriptional regulator, LacI family
similar to GB:AL009126; identified by sequence similarity; putative
genbank 15601431 NP_233062.1 343 608100 609131
220964 hypothetical VCA0675 nitrate/nitrite sensor protein NarQ
similar to GB:M94724 SP:P27896 GB:X65714 PID:146928 PID:581139; identified by sequence similarity; putative
genbank 15601432 NP_233063.1 583 609797 611548
220965 hypothetical VCA0676 iron-sulfur cluster-binding protein NapF
similar to SP:P33939 PID:453990 GB:U00096 PID:1736849 PID:1788536; identified by sequence similarity; putative
genbank 15601433 NP_233064.1 168 611706 612212
220966 hypothetical VCA0677 napD protein
similar to SP:P33938 PID:405935 GB:U00096 PID:1788535; identified by sequence similarity; putative
genbank 15601434 NP_233065.1 113 612218 612559
220967 hypothetical VCA0678 periplasmic nitrate reductase
similar to SP:P33937 PID:453989 GB:U00096 PID:1736847 PID:1788534; identified by sequence similarity; putative
genbank 15601435 NP_233066.1 829 612556 615045
220968 hypothetical VCA0679 periplasmic nitrate reductase, cytochrome c-type protein
similar to GB:X71385 SP:P39186 PID:402548; identified by sequence similarity; putative
genbank 15601436 NP_233067.1 171 615052 615567
220969 hypothetical VCA0680 periplasmic nitrate reductase, cytochrome c-type protein
similar to PID:1150572 SP:Q53178; identified by sequence similarity; putative
genbank 15601437 NP_233068.1 191 615585 616160
220970 hypothetical VCA0681 hypothetical protein
identified by Glimmer2; putative
genbank 15601438 NP_233069.1 431 616344 617639
220971 hypothetical VCA0682 transcriptional regulator UhpA
similar to GB:L10328 SP:P10940 GB:M89479 PID:148112 PID:148117; identified by sequence similarity; putative
genbank 15601439 NP_233070.1 208 617798 618424
220972 hypothetical VCA0683 sensor protein UhpB
similar to GB:M89480 SP:P27668 PID:154409; identified by sequence similarity; putative
genbank 15601440 NP_233071.1 527 618427 620010
220973 hypothetical VCA0684 regulatory protein UhpC
similar to GB:L10328 SP:P09836 GB:M89479 PID:148114 PID:148119; identified by sequence similarity; putative
genbank 15601441 NP_233072.1 436 620078 621388
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220974 hypothetical VCA0685 iron(III) ABC transporter, periplasmic iron-compound-binding protein
similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative
genbank 15601442 NP_233073.1 344 621501 622535
220975 hypothetical VCA0686 iron(III) ABC transporter, permease protein
similar to PID:1469285 PID:1477454; identified by sequence similarity; putative
genbank 15601443 NP_233074.1 700 622639 624741
220976 hypothetical VCA0687 iron(III) ABC transporter, ATP-binding protein
similar to SP:P37009 PID:1209001 PID:304903 GB:U00096 PID:1552831; identified by sequence similarity; putative
genbank 15601444 NP_233075.1 351 624753 625808
220977 hypothetical VCA0688 polyhydroxyalkanoic acid synthase
similar to GB:U04848 GB:L37761 PID:443736 PID:576785; identified by sequence similarity; putative
genbank 15601445 NP_233076.1 591 625894 627669
220978 hypothetical VCA0689 hypothetical protein
identified by Glimmer2; putative
genbank 15601446 NP_233077.1 115 627727 628074
220979 hypothetical VCA0690 acetyl-CoA acetyltransferase
Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
genbank 15601447 NP_233078.1 401 628104 629309
220980 hypothetical VCA0691 acetoacetyl-CoA reductase
Converts (R)-3-hydroxyacyl-CoA to 3-oxoacyl-CoA
genbank 15601448 NP_233079.1 246 629322 630062
220981 hypothetical VCA0693 protein export protein SecD
with SecF and SecG facilitaes the delivery of the preprotein to the translocase by SecA, SecDF is also important for the release of the preprotein from the translocase
genbank 15601449 NP_233080.1 612 631637 633475
220982 hypothetical VCA0694 hypothetical protein
identified by Glimmer2; putative
genbank 15601450 NP_233081.1 151 633547 634002
220983 hypothetical VCA0695 hypothetical protein
identified by Glimmer2; putative
genbank 15601451 NP_233082.1 223 634079 634750
220984 hypothetical VCA0696 hypothetical protein
identified by Glimmer2; putative
genbank 15601452 NP_233083.1 36 634785 634895
220985 hypothetical VCA0697 sensory box/GGDEF family protein
similar to PID:1001780 PID:1001841; identified by sequence similarity; putative
genbank 15601453 NP_233084.1 642 635108 637036
220986 hypothetical VCA0698 hypothetical protein
identified by Glimmer2; putative
genbank 15601454 NP_233085.1 30 637033 637125
220987 glgC hypothetical VCA0699 glucose-1-phosphate adenylyltransferase
catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
genbank 15601455 NP_233086.1 407 637339 638562
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220988 hypothetical VCA0700 chitodextrinase
similar to GP:3928775; identified by sequence similarity; putative
genbank 15601456 NP_233087.1 1051 638828 641983
220989 hypothetical VCA0701 hypothetical protein
identified by Glimmer2; putative
genbank 15601457 NP_233088.1 43 642017 642148
220990 hypothetical VCA0702 iron-containing alcohol dehydrogenase
similar to PID:882540 GB:U00096 PID:1789386; identified by sequence similarity; putative
genbank 15601458 NP_233089.1 382 642655 643803
220991 hypothetical VCA0703 hypothetical protein
identified by Glimmer2; putative
genbank 15601459 NP_233090.1 229 643882 644571
220992 hypothetical VCA0704 phosphoglycerate transport system transcriptional regulatory protein PgtA
similar to GB:M13923 SP:P06184 PID:154255; identified by sequence similarity; putative
genbank 15601460 NP_233091.1 439 644568 645887
220993 hypothetical VCA0705 phosphoglycerate transport regulatory protein PgtB, putative
similar to PID:858753; identified by sequence similarity; putative
genbank 15601461 NP_233092.1 789 645805 648174
220994 hypothetical VCA0706 phosphoglycerate transport regulatory protein PgtC, putative
similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative
genbank 15601462 NP_233093.1 440 648171 649493
220995 hypothetical VCA0707 regulatory protein UhpC, putative
similar to GB:M89480 SP:P27669 GB:X52093 PID:154410; identified by sequence similarity; putative
genbank 15601463 NP_233094.1 459 649740 651119
220996 hypothetical VCA0708 pyruvate kinase
catalyzes the formation of phosphoenolpyruvate from pyruvate
genbank 15601464 NP_233095.1 486 651241 652701
220997 hypothetical VCA0709 sensor protein TorS
similar to SP:P39453 PID:1122856 GB:U00096 PID:1787227; identified by sequence similarity; putative
genbank 15601465 NP_233096.1 1020 652820 655882
220998 hypothetical VCA0710 periplasmic protein TorT
similar to GB:X78195 SP:P38683 PID:1122857 GB:U00096 PID:1787228; identified by sequence similarity; putative
genbank 15601466 NP_233097.1 349 655805 656854
220999 hypothetical VCA0711 methylglyoxal synthase
catalyzes the formation of methylglyoxal from glycerone phosphate
genbank 15601467 NP_233098.1 151 656909 657364
221000 hypothetical VCA0712 pyrazinamidase/nicotinamidase
similar to GB:M26934 SP:P21369 PID:145280 GB:U00096 PID:1788066; identified by sequence similarity; putative
genbank 15601468 NP_233099.1 206 657433 658053
221001 hypothetical VCA0713 hypothetical protein
identified by Glimmer2; putative
genbank 15601469 NP_233100.1 38 658175 658291
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
221002 hypothetical VCA0714 diacylglycerol kinase
similar to GB:L42023 SP:P44424 PID:1003561 PID:1222260 PID:1204587; identified by sequence similarity; putative
genbank 15601470 NP_233101.1 118 658358 658714


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