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Library:1934 (dbEST ID)
Organism: | Mus musculus |
Strain: | C57BL/6J |
Developmental stage: | 27-32 days |
Vector: | pT7T3D-PacI |
Vector type: | Phagemid |
Cloning site 1: | Not I |
Cloning site 2: | Eco RI |
Lab host: | DH10B (Life Technologies) |
The NIH_BMAP_MOB_N library is a normalized library constructed from mouse olfactory bulbs. The tag is a string of 5 nucleotides present between the Not I site and the oligo-dT track. The library was constructed as described by Bonaldo, Lennon and Soares, Genome Research 6: 791-806, 1996. Tissue provided by Ms. Annie Novakovich, Zivic-Miller Laboratories.
Source: Chin, H, National Institute of Mental Health
1,271 ESTs from this library were grouped into 804 UniGene entries (putative genes) [UniGene build #178, 06-Feb-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).
ESTs | TPM | UniGene Entry | ||
---|---|---|---|---|
5 | 3934 | Mm.8569 | Transmembrane protein 158. | |
5 | 3934 | Mm.335368 | Transcribed locus, strongly similar to NP_032933.1 peptidylprolyl isomerase A [Mus musculus]. | |
5 | 3934 | Mm.260504 | MAP/microtubule affinity-regulating kinase 4. | |
5 | 3934 | Mm.252063 | Myelin basic protein. | |
4 | 3147 | Mm.644 | Myocyte enhancer factor 2B. | |
4 | 3147 | Mm.41639 | Protein tyrosine phosphatase, receptor type Z, polypeptide 1. | |
4 | 3147 | Mm.41459 | Spermatogenesis associated 2-like. | |
4 | 3147 | Mm.40461 | Myelin-associated oligodendrocytic basic protein. | |
4 | 3147 | Mm.343934 | Growth hormone. | |
4 | 3147 | Mm.262252 | Small EDRK-rich factor 2. | |
4 | 3147 | Mm.253403 | Solute carrier family 38, member 10. | |
4 | 3147 | Mm.245897 | Potassium channel tetramerisation domain containing 13. | |
4 | 3147 | Mm.21094 | Glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A. | |
4 | 3147 | Mm.10091 | Protein kinase inhibitor, gamma. | |
3 | 2360 | Mm.87027 | Cell cycle exit and neuronal differentiation 1. | |
3 | 2360 | Mm.831 | Signal sequence receptor, delta. | |
3 | 2360 | Mm.7723 | Poly(A) binding protein, nuclear 1. | |
3 | 2360 | Mm.40577 | Protein phosphatase 1 (formerly 2C)-like. | |
3 | 2360 | Mm.396243 | Ribosomal protein L3. | |
3 | 2360 | Mm.389540 | Ubiquitin-conjugating enzyme E2R 2. | |
3 | 2360 | Mm.381 | Adipose differentiation related protein. | |
3 | 2360 | Mm.371641 | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d. | |
3 | 2360 | Mm.355894 | Signal peptide peptidase 3. | |
3 | 2360 | Mm.339676 | SERTA domain containing 2. | |
3 | 2360 | Mm.33729 | Solute carrier family 25 (mitochondrial carrier, glutamate), member 22. | |
3 | 2360 | Mm.33304 | Potassium channel, subfamily K, member 2. | |
3 | 2360 | Mm.329243 | Calmodulin 2. | |
3 | 2360 | Mm.32780 | Megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human). | |
3 | 2360 | Mm.310424 | Transcribed locus. | |
3 | 2360 | Mm.30210 | Proteasome (prosome, macropain) subunit, alpha type 6. | |
3 | 2360 | Mm.29801 | Elongation factor 1 homolog (ELF1, S. cerevisiae). | |
3 | 2360 | Mm.29755 | Inner centromere protein. | |
3 | 2360 | Mm.29609 | CDK2-associated protein 2. | |
3 | 2360 | Mm.289248 | Transcription elongation factor B (SIII), polypeptide 1. | |
3 | 2360 | Mm.28924 | Phosphatidylinositol glycan anchor biosynthesis, class Y-like. | |
3 | 2360 | Mm.288183 | Required for meiotic nuclear division 5 homolog B (S. cerevisiae). | |
3 | 2360 | Mm.28561 | Protein kinase C, zeta. | |
3 | 2360 | Mm.28270 | Cell division cycle 5-like (S. pombe). | |
3 | 2360 | Mm.280068 | Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. | |
3 | 2360 | Mm.277661 | Low density lipoprotein receptor-related protein associated protein 1. | |
3 | 2360 | Mm.261906 | SplA/ryanodine receptor domain and SOCS box containing 2. | |
3 | 2360 | Mm.261333 | Signal-induced proliferation-associated 1 like 1. | |
3 | 2360 | Mm.255667 | Secretagogin, EF-hand calcium binding protein. | |
3 | 2360 | Mm.239793 | Zinc finger with KRAB and SCAN domains 17. | |
3 | 2360 | Mm.230296 | Protein phosphatase 1F (PP2C domain containing). | |
3 | 2360 | Mm.22673 | Fc receptor, IgE, high affinity I, gamma polypeptide. | |
3 | 2360 | Mm.225050 | Neuron navigator 3. | |
3 | 2360 | Mm.223674 | Synaptophysin. | |
3 | 2360 | Mm.21911 | REX2, RNA exonuclease 2 homolog (S. cerevisiae). | |
3 | 2360 | Mm.21549 | Heat shock protein 8. | |
3 | 2360 | Mm.2152 | HIV TAT specific factor 1. | |
3 | 2360 | Mm.208700 | POU domain, class 2, transcription factor 2. | |
3 | 2360 | Mm.205625 | ATPase type 13A2. | |
3 | 2360 | Mm.19133 | Amyloid beta (A4) precursor-like protein 2. | |
3 | 2360 | Mm.18590 | Tetraspanin 7. | |
3 | 2360 | Mm.185453 | Eukaryotic translation initiation factor 4, gamma 2. | |
3 | 2360 | Mm.1776 | Ferritin heavy chain 1. | |
3 | 2360 | Mm.139675 | Tumor-suppressing subchromosomal transferable fragment 4. | |
3 | 2360 | Mm.118 | Sin3 associated polypeptide. | |
3 | 2360 | Mm.1008 | Prostaglandin D2 synthase (brain). | |
2 | 1574 | Mm.927 | Budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae). | |
2 | 1574 | Mm.8856 | Neuraminidase 1. | |
2 | 1574 | Mm.8004 | Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3. | |
2 | 1574 | Mm.7491 | N-myc (and STAT) interactor. | |
2 | 1574 | Mm.72187 | RIKEN cDNA 4833424O15 gene. | |
2 | 1574 | Mm.7013 | Riboflavin kinase. | |
2 | 1574 | Mm.6967 | BCL2-like 2. | |
2 | 1574 | Mm.6787 | Splicing factor, arginine/serine-rich 3 (SRp20). | |
2 | 1574 | Mm.6667 | Single stranded DNA binding protein 4. | |
2 | 1574 | Mm.6666 | Zinc finger protein 316. | |
2 | 1574 | Mm.66264 | Syntaxin 6. | |
2 | 1574 | Mm.648 | Prion protein. | |
2 | 1574 | Mm.6105 | Phospholipid transfer protein. | |
2 | 1574 | Mm.55422 | NFKB activating protein. | |
2 | 1574 | Mm.52265 | Cystin 1. | |
2 | 1574 | Mm.50109 | RIKEN cDNA 1500015O10 gene. | |
2 | 1574 | Mm.4954 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2. | |
2 | 1574 | Mm.477482 | RIKEN cDNA 1110018J18 gene. | |
2 | 1574 | Mm.476996 | Leucine-rich repeat-containing G protein-coupled receptor 4. | |
2 | 1574 | Mm.476828 | TM2 domain containing 3. | |
2 | 1574 | Mm.475881 | STIP1 homology and U-Box containing protein 1. | |
2 | 1574 | Mm.474432 | Farnesyl diphosphate farnesyl transferase 1. | |
2 | 1574 | Mm.473629 | Transcribed locus. | |
2 | 1574 | Mm.472992 | Transcribed locus. | |
2 | 1574 | Mm.471766 | Zinc fingers and homeoboxes 3. | |
2 | 1574 | Mm.470368 | Transcribed locus. | |
2 | 1574 | Mm.469917 | Tubulin, beta 2a. | |
2 | 1574 | Mm.46744 | Cappuccino. | |
2 | 1574 | Mm.466983 | Transcribed locus. | |
2 | 1574 | Mm.465586 | Transcribed locus. | |
2 | 1574 | Mm.460392 | Transcribed locus. | |
2 | 1574 | Mm.460363 | Transcribed locus. | |
2 | 1574 | Mm.4598 | Brevican. | |
2 | 1574 | Mm.458078 | RIKEN cDNA 1500011B03 gene. | |
2 | 1574 | Mm.45688 | RIKEN cDNA E130308A19 gene. | |
2 | 1574 | Mm.456388 | Transcribed locus. | |
2 | 1574 | Mm.4550 | ATPase, Na+/K+ transporting, beta 1 polypeptide. | |
2 | 1574 | Mm.443726 | Transcribed locus. | |
2 | 1574 | Mm.443721 | Transcribed locus. | |
2 | 1574 | Mm.44227 | NADH dehydrogenase (ubiquinone) Fe-S protein 8. |
Source: NCBI UniGene
1,351 EST sequences from this library have been submitted to the public sequence database as of 06-Feb-2009.
Source: NCBI GenBank
Click the button to save sequences to a file (FASTA format)
Source: NCBI Clone Registry
Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al., Genome Res 6, 791-806 (1996).