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Cancer Genome Anatomy Project |
| NCI > CGAP > GAI > SNP Maps > Chr 19 > SNPs Localized to Interval 1 |
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D19S209 - D19S216 0.0 cM - 5.9 cM / 29.59 cR - 35.88 cR |
| UniGene | Gene Symbol | Description | SNP IDs | SNP Summary | CGAP Gene Info |
| Confirmed SNPs | |||||
| Hs.406534 | HMG20B | High-mobility group 20B | CGAP-C-12821 |
SNPs | Gene Info |
| Validated SNPs | |||||
| Hs.203910 | SGTA | Small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha | CGAP-C-48784 CGAP-C-48785 CGAP-C-612375 |
SNPs | Gene Info |
| Hs.591387 | KIAA1881 | KIAA1881 | CGAP-C-60289 |
SNPs | Gene Info |
| Hs.657032 | NCLN | Nicalin homolog (zebrafish) | CGAP-C-49027 |
SNPs | Gene Info |
| Hs.591384 | ZBTB7A | Zinc finger and BTB domain containing 7A | CGAP-C-606665 |
SNPs | Gene Info |
| Hs.194385 | STAP2 | Signal transducing adaptor family member 2 | CGAP-C-268730 |
SNPs | Gene Info |
| Hs.501452 | EBI3 | Epstein-Barr virus induced 3 | CGAP-C-47813 CGAP-C-56390 |
SNPs | Gene Info |
| Hs.465643 | TNFAIP8L1 | Tumor necrosis factor, alpha-induced protein 8-like 1 | CGAP-C-261349 |
SNPs | Gene Info |
| Hs.25527 | TJP3 | Tight junction protein 3 (zona occludens 3) | CGAP-C-604815 |
SNPs | Gene Info |
| Hs.28144 | FSD1 | Fibronectin type III and SPRY domain containing 1 | CGAP-C-607011 |
SNPs | Gene Info |
| Hs.465627 | MAP2K2 | Mitogen-activated protein kinase kinase 2 | CGAP-C-47852 CGAP-C-47853 |
SNPs | Gene Info |
| Hs.654784 | GNA11 | Guanine nucleotide binding protein (G protein), alpha 11 (Gq class) | CGAP-C-51175 CGAP-C-247767 CGAP-C-629784 |
SNPs | Gene Info |
| Hs.7423 | SHD | Src homology 2 domain containing transforming protein D | CGAP-C-243973 |
SNPs | Gene Info |
| Hs.435255 | UBXN6 | UBX domain protein 6 | CGAP-C-58336 CGAP-C-266992 |
SNPs | Gene Info |
| Hs.172753 | DIRAS1 | DIRAS family, GTP-binding RAS-like 1 | CGAP-C-614804 |
SNPs | Gene Info |
| Hs.515082 | FEM1A | Fem-1 homolog a (C. elegans) | CGAP-C-630333 |
SNPs | Gene Info |
| Hs.140452 | M6PRBP1 | Mannose-6-phosphate receptor binding protein 1 | CGAP-C-51578 |
SNPs | Gene Info |
| Hs.68257 | GTF2F1 | General transcription factor IIF, polypeptide 1, 74kDa | CGAP-C-257645 |
SNPs | Gene Info |
| Hs.515575 | PLAC2 | Placenta-specific 2 (non-protein coding) | CGAP-C-234966 |
SNPs | Gene Info |
| Hs.584744 | CAPS | Calcyphosine | CGAP-C-623833 |
SNPs | Gene Info |
| Hs.515092 | CLPP | ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) | CGAP-C-608167 |
SNPs | Gene Info |
| Predicted SNPs | |||||
| Hs.282177 | PIP5K1C | Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma | CGAP-C-2413498 CGAP-C-2413499 CGAP-C-2413500 CGAP-C-2413505 |
SNPs | Gene Info |
| Hs.203910 | SGTA | Small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha | CGAP-C-2451699 CGAP-C-2451702 |
SNPs | Gene Info |
| Hs.423756 | SIRT6 | Sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) | CGAP-C-2395346 CGAP-C-2395347 |
SNPs | Gene Info |
| Hs.465645 | C19orf10 | Chromosome 19 open reading frame 10 | CGAP-C-2440975 CGAP-C-2440976 CGAP-C-2440977 CGAP-C-2440979 CGAP-C-2440980 CGAP-C-2440981 |
SNPs | Gene Info |
| Hs.569985 | - | Transcribed locus | CGAP-C-2448713 |
SNPs | Gene Info |
| Hs.515070 | EEF2 | Eukaryotic translation elongation factor 2 | CGAP-C-2420284 CGAP-C-2420286 CGAP-C-2420287 CGAP-C-2420291 CGAP-C-2420292 CGAP-C-2420300 CGAP-C-2420301 CGAP-C-2420302 |
SNPs | Gene Info |
| Hs.105779 | PIAS4 | Protein inhibitor of activated STAT, 4 | CGAP-C-2485623 CGAP-C-2485624 CGAP-C-2485625 |
SNPs | Gene Info |
| Hs.128425 | C19orf29OS | Chromosome 19 open reading frame 29 opposite strand | CGAP-C-2439206 CGAP-C-2439207 CGAP-C-2439208 |
SNPs | Gene Info |
| Hs.657032 | NCLN | Nicalin homolog (zebrafish) | CGAP-C-2402390 CGAP-C-2402393 CGAP-C-2402394 CGAP-C-2402395 CGAP-C-2402396 CGAP-C-2402397 CGAP-C-2402398 |
SNPs | Gene Info |
| Hs.715565 | C19orf29 | Chromosome 19 open reading frame 29 | CGAP-C-2439204 |
SNPs | Gene Info |
| Hs.591384 | ZBTB7A | Zinc finger and BTB domain containing 7A | CGAP-C-2453824 CGAP-C-2453825 |
SNPs | Gene Info |
| Hs.79018 | CHAF1A | Chromatin assembly factor 1, subunit A (p150) | CGAP-C-2489319 |
SNPs | Gene Info |
| Hs.194385 | STAP2 | Signal transducing adaptor family member 2 | CGAP-C-2448746 |
SNPs | Gene Info |
| Hs.501452 | EBI3 | Epstein-Barr virus induced 3 | CGAP-C-2404885 |
SNPs | Gene Info |
| Hs.170131 | NFIC | Nuclear factor I/C (CCAAT-binding transcription factor) | CGAP-C-2448715 CGAP-C-2448716 CGAP-C-2479193 CGAP-C-2479196 |
SNPs | Gene Info |
| Hs.465643 | TNFAIP8L1 | Tumor necrosis factor, alpha-induced protein 8-like 1 | CGAP-C-2441353 |
SNPs | Gene Info |
| Hs.655559 | LRG1 | Leucine-rich alpha-2-glycoprotein 1 | CGAP-C-2485890 CGAP-C-2485891 |
SNPs | Gene Info |
| Hs.21811 | CCDC94 | Coiled-coil domain containing 94 | CGAP-C-2389251 CGAP-C-2389252 |
SNPs | Gene Info |
| Hs.25527 | TJP3 | Tight junction protein 3 (zona occludens 3) | CGAP-C-2460310 CGAP-C-2460311 |
SNPs | Gene Info |
| Hs.28144 | FSD1 | Fibronectin type III and SPRY domain containing 1 | CGAP-C-2436222 |
SNPs | Gene Info |
| Hs.465627 | MAP2K2 | Mitogen-activated protein kinase kinase 2 | CGAP-C-2460936 |
SNPs | Gene Info |
| Hs.654784 | GNA11 | Guanine nucleotide binding protein (G protein), alpha 11 (Gq class) | CGAP-C-2395387 |
SNPs | Gene Info |
| Hs.406534 | HMG20B | High-mobility group 20B | CGAP-C-2426222 |
SNPs | Gene Info |
| Hs.7423 | SHD | Src homology 2 domain containing transforming protein D | CGAP-C-2453438 CGAP-C-2453439 |
SNPs | Gene Info |
| Hs.78769 | THOP1 | Thimet oligopeptidase 1 | CGAP-C-2476929 CGAP-C-2476931 CGAP-C-2476932 |
SNPs | Gene Info |
| Hs.435255 | UBXN6 | UBX domain protein 6 | CGAP-C-2455260 CGAP-C-2455264 CGAP-C-2455265 |
SNPs | Gene Info |
| Hs.656901 | C19orf28 | Chromosome 19 open reading frame 28 | CGAP-C-2405850 CGAP-C-2405852 CGAP-C-2405853 CGAP-C-2405854 |
SNPs | Gene Info |
| Hs.172753 | DIRAS1 | DIRAS family, GTP-binding RAS-like 1 | CGAP-C-2437600 CGAP-C-2437602 |
SNPs | Gene Info |
| Hs.465607 | APBA3 | Amyloid beta (A4) precursor protein-binding, family A, member 3 | CGAP-C-2420777 CGAP-C-2420778 CGAP-C-2420779 CGAP-C-2420780 |
SNPs | Gene Info |
| Hs.664978 | C19orf71 | Chromosome 19 open reading frame 71 | CGAP-C-2457392 |
SNPs | Gene Info |
| Hs.515082 | FEM1A | Fem-1 homolog a (C. elegans) | CGAP-C-2482623 |
SNPs | Gene Info |
| Hs.29344 | TICAM1 | Toll-like receptor adaptor molecule 1 | CGAP-C-2436223 CGAP-C-2436225 CGAP-C-2436227 CGAP-C-2436228 |
SNPs | Gene Info |
| Hs.140452 | M6PRBP1 | Mannose-6-phosphate receptor binding protein 1 | CGAP-C-2404911 |
SNPs | Gene Info |
| Hs.713525 | MLLT1 | Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 | CGAP-C-2426926 CGAP-C-2426927 |
SNPs | Gene Info |
| Hs.284297 | DUS3L | Dihydrouridine synthase 3-like (S. cerevisiae) | CGAP-C-2459748 CGAP-C-2459750 CGAP-C-2459751 CGAP-C-2459752 |
SNPs | Gene Info |
| Hs.23978 | SAFB | Scaffold attachment factor B | CGAP-C-2455464 CGAP-C-2455466 |
SNPs | Gene Info |
| Hs.356626 | C19orf70 | Chromosome 19 open reading frame 70 | CGAP-C-2425569 |
SNPs | Gene Info |
| Hs.631840 | HSD11B1L | Hydroxysteroid (11-beta) dehydrogenase 1-like | CGAP-C-2407668 |
SNPs | Gene Info |
| Hs.654816 | JMJD2B | Jumonji domain containing 2B | CGAP-C-2422249 |
SNPs | Gene Info |
| Hs.712625 | PTPRS | Protein tyrosine phosphatase, receptor type, S | CGAP-C-2395316 CGAP-C-2395319 |
SNPs | Gene Info |
| Hs.708128 | KHSRP | KH-type splicing regulatory protein | CGAP-C-2461834 CGAP-C-2461847 CGAP-C-2461852 CGAP-C-2461853 |
SNPs | Gene Info |
| Hs.110837 | TUBB4 | Tubulin, beta 4 | CGAP-C-2409867 |
SNPs | Gene Info |
| Hs.111099 | ALKBH7 | AlkB, alkylation repair homolog 7 (E. coli) | CGAP-C-2456506 CGAP-C-2456507 CGAP-C-2456508 |
SNPs | Gene Info |
| Hs.406062 | NDUFA11 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa | CGAP-C-2466551 |
SNPs | Gene Info |
| Hs.465709 | RFX2 | Regulatory factor X, 2 (influences HLA class II expression) | CGAP-C-2395084 CGAP-C-2395085 |
SNPs | Gene Info |
| Hs.584744 | CAPS | Calcyphosine | CGAP-C-2436401 |
SNPs | Gene Info |
| Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov ) |