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UniSTS:78900 Links
SHGC-32613
Homo sapiens chromosome 3, locus PTPRG
Pan troglodytes chromosome 3, locus PTPRG

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TTCTCTCCCACTCTTTTCGTC
Reverse primer:TAGATCATGCTGACTGCCCG
PCR product size:150 (bp), Homo sapiens
GenBank Accession:G25790 G27613 H90744

   Homo sapiens
Name: SHGC-32613
Also known as: EST393155 SGC32613
Polymorphism info:  

Cross References Help
Gene GeneID:5793
 Symbol:PTPRG
 Description:protein tyrosine phosphatase, receptor type, G
 Position:3p21-p14

Mapping InformationHelp
SHGC-32613 Sequence Map: Chr 3 Map Viewer
  Position: 61758463-61758612 (bp)
 
SHGC-32613 Sequence Map: Chr 3|Celera Map Viewer
  Position: 61796303-61796452 (bp)
 
SHGC-32613 Sequence Map: Chr 3|HuRef Map Viewer
  Position: 61882353-61882502 (bp)
 
SHGC-32613 NCBI RH Map: Chr 3 Map Viewer
  Position: 596.4 (cR)
  Lod score: 2.02
 
SHGC-32613 Stanford-G3 Map: Chr 3 Map Viewer
  Position: 2851 (cR10000)
  Lod score: F
  Reference Interval: 50
 
SGC32613 Whitehead-RH Map: Chr 3 Map Viewer
  Position: 229.7 (cR3000)
  Lod score: P1.40
 
SHGC-32613 GeneMap99-G3 Map: Chr 3 Map Viewer
  Position: 2749 (cR10000)
  Lod score: F
  Reference Interval: D3S1547-D3S1261
 
SGC32613 GeneMap99-GB4 Map: Chr 3 Map Viewer
  Position: 198.02 (cR3000)
  Lod score: 0.02
  Reference Interval: D3S1547-D3S1261

Electronic PCR results Help
mRNA (1)
AK129954.1 107 .. 256 (150 bp)  
 
Genomic (5 of 9)[Show All Hits]
G25790.1 1 .. 150 (150 bp)  
G27613.1 1 .. 150 (150 bp)  
AC098482.2 18942 .. 19091 (150 bp)  
CH003450.1 61975878 .. 61976027 (150 bp)  
CH003498.1 66563303 .. 66563452 (150 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (2)
AC068168.2 72158 .. 72307 (150 bp)  
AC069295.6 26300 .. 26449 (150 bp)  
 
ESTs (4)
H90744.1 1 .. 150 (150 bp)  
AA866149.1 5 .. 154 (150 bp)  
BF431170.1 5 .. 154 (150 bp)  
DB310397.1 5 .. 154 (150 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01033452.1 406 .. 555 (150 bp)  
AADC01029650.1 30513 .. 30662 (150 bp)  
AADB02003848.1 397408 .. 397557 (150 bp)  
ABBA01024337.1 37734 .. 37883 (150 bp)  
 

   Pan troglodytes
Name: SHGC-32613
Polymorphism info:  

Cross References Help
Gene GeneID:460484
 Symbol:PTPRG
 Description:protein tyrosine phosphatase, receptor type, G
 Position: 

Mapping InformationHelp
SHGC-32613 Sequence Map: Chr 3 Map Viewer
  Position: 63225198-63225347 (bp)

Electronic PCR results Help
Genomic (1)
CM000317.1 63225198 .. 63225347 (150 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01277399.1 2786 .. 2935 (150 bp)  
AACZ02036934.1 3627 .. 3776 (150 bp)  
 

 

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