Vibrio vulnificus CMCP6 chromosome I

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189733-189832 (1-100) 189833-189932 (101-200) 189933-190032 (201-300) 190033-190132 (301-400) [190133-190232 (401-500)]
190233-190332 (501-600) 190333-190432 (601-700) 190433-190532 (701-800) 190533-190632 (801-900) 190633-190732 (901-1000)
190733-190832 (1001-1100) 190833-190932 (1101-1200) 190933-191032 (1201-1300) 191033-191132 (1301-1400) 191133-191232 (1401-1500)
191233-191332 (1501-1600) 191333-191432 (1601-1700) 191433-191532 (1701-1800) 191533-191632 (1801-1900) 191633-191732 (1901-2000)
191733-191832 (2001-2100) 191833-191932 (2101-2200) 191933-192032 (2201-2300) 192033-192132 (2301-2400) 192133-192232 (2401-2500)
192233-192332 (2501-2600) 192333-192432 (2601-2700) 192433-192532 (2701-2800) 192533-192632 (2801-2900) 192633-192658 (2901-2926)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190133 hypothetical VV10423 GTP-binding protein EngA
COG1160
genbank 27363891 NP_759419.1 496 419178 420668
190134 hypothetical VV10424 hypothetical protein
contains WD40-like repeat; COG1520
genbank 27363892 NP_759420.1 386 420870 422030
190135 hypothetical VV10425 hypothetical protein
COG2976
genbank 27363893 NP_759421.1 204 422043 422657
190136 hisS hypothetical VV10426 histidyl-tRNA synthetase
Catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
genbank 27363894 NP_759422.1 412 422727 423965
190137 hypothetical VV10427 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate
genbank 27363895 NP_759423.1 372 424031 425149
190138 hypothetical VV10428 hypothetical protein
COG1426
genbank 27363896 NP_759424.1 316 425155 426105
190139 hypothetical VV10429 Predicted Fe-S-cluster redox enzyme
COG0820
genbank 27363897 NP_759425.1 374 426471 427595
190140 hypothetical VV10430 nucleoside diphosphate kinase
catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
genbank 27363898 NP_759426.1 141 427792 428217
190141 hypothetical VV10431 aminopeptidase B
catalyzes the removal of an N-terminal amino acid from a peptide or arylamide
genbank 27363899 NP_759427.1 428 428281 429567
190142 hypothetical VV10432 hypothetical protein
COG2975
genbank 27363900 NP_759428.1 64 429732 429926
190143 hypothetical VV10433 Ferredoxin
COG0633
genbank 27363901 NP_759429.1 112 430008 430346
190144 hscA hypothetical VV10434 chaperone protein HscA
involved in the maturation of iron-sulfur cluster-containing proteins
genbank 27363902 NP_759430.1 617 430358 432211
190145 hscB hypothetical VV10435 co-chaperone HscB
J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
genbank 27363903 NP_759431.1 171 432233 432748
190146 hypothetical VV10436 HesB family protein
COG0316
genbank 27363904 NP_759432.1 107 432809 433132
190147 hypothetical VV10437 NifU homolog involved in Fe-S cluster formation
COG0822
genbank 27363905 NP_759433.1 127 433205 433588
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190148 hypothetical VV10438 cysteine desulfurase
involved in the biosynthesis of iron-sulfur clusters
genbank 27363906 NP_759434.1 404 433632 434846
190149 hypothetical VV10439 Predicted transcriptional regulator
COG1959
genbank 27363907 NP_759435.1 168 434877 435383
190150 hypothetical VV10440 rRNA methylase
TrmH family; COG0565
genbank 27363908 NP_759436.1 242 435501 436229
190151 hypothetical VV10441 Inositol monophosphate family protein
COG0483
genbank 27363909 NP_759437.1 267 436474 437277
190152 hypothetical VV10442 protein export protein SecF
with SecD and SecG facilitates the delivery of the preprotein to the translocase by SecA, SecDF is also important for the release of the preprotein from the translocase
genbank 27363910 NP_759438.1 315 437410 438357
190153 hypothetical VV10443 protein export protein SecD
with SecF and SecG facilitaes the delivery of the preprotein to the translocase by SecA, SecDF is also important for the release of the preprotein from the translocase
genbank 27363911 NP_759439.1 607 438372 440195
190154 yajC hypothetical VV10444 preprotein translocase subunit YajC
member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex
genbank 27363912 NP_759440.1 109 440250 440579
190155 hypothetical VV10445 queuine tRNA-ribosyltransferase
Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermo
genbank 27363913 NP_759441.1 412 440697 441935
190156 hypothetical VV10446 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step. The ribosyl moiety of AdoMet is transferred and isomerized to the epoxycyclopentane residue of oQ
genbank 27363914 NP_759442.1 350 442049 443101
190157 hypothetical VV10447 Secreted trypsin-like serine protease
COG5640
genbank 27363915 NP_759443.1 386 443318 444478
190158 hypothetical VV10448 Putative acetoin utilization protein AcuB
COG0517
genbank 27363916 NP_759444.1 151 444746 445201
190159 hypothetical VV10449 isocitrate lyase
Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates
genbank 27363917 NP_759445.1 437 445309 446622
190160 hypothetical VV10450 malate synthase
Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle
genbank 27363918 NP_759446.1 545 446750 448387
190161 hypothetical VV10451 Transcriptional regulator
LysR family; COG0583
genbank 27363919 NP_759447.1 301 448992 449897
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190162 hypothetical VV10453 Peroxiredoxin
AhpC/Tsa family; COG0450
genbank 27363920 NP_759448.1 202 450095 450703
190163 hypothetical VV10454 Copper homeostasis protein
COG3142
genbank 27363921 NP_759449.1 250 450965 451717
190164 hypothetical VV10455 hypothetical protein
COG2326
genbank 27363922 NP_759450.1 258 451771 452547
190165 hypothetical VV10456 Putative transcriptional regulator
COG0583
genbank 27363923 NP_759451.1 313 452558 453499
190166 hypothetical VV10457 hypothetical protein genbank 27363924 NP_759452.1 232 453629 454327
190167 hypothetical VV10458 hypothetical protein genbank 27363925 NP_759453.1 224 454386 455060
190168 hypothetical VV10459 hypothetical protein genbank 27363926 NP_759454.1 154 455199 455663
190169 hypothetical VV10460 Phosphate uptake regulator
COG0704
genbank 27363927 NP_759455.1 232 455667 456365
190170 hypothetical VV10461 ABC-type phosphate transport system, ATPase component
COG1117
genbank 27363928 NP_759456.1 272 456390 457208
190171 hypothetical VV10462 ABC-type phosphate transport system, permease component
ABC-type phosphate transport system, auxiliary component; COG4985; COG0581
genbank 27363929 NP_759457.1 556 457210 458880
190172 hypothetical VV10463 ABC-type uncharacterized transport system, permease component
COG4590
genbank 27363930 NP_759458.1 730 458908 461100
190173 hypothetical VV10464 polyphosphate kinase
catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
genbank 27363931 NP_759459.1 700 461298 463400
190174 hypothetical VV10465 Exopolyphosphatase
COG0248
genbank 27363932 NP_759460.1 479 463444 464883
190175 hypothetical VV10466 ABC-type phosphate transport system, periplasmic component
COG0226
genbank 27363933 NP_759461.1 317 464935 465888
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190176 hypothetical VV10467 Signal transduction histidine kinase
COG0642
genbank 27363934 NP_759462.1 402 465885 467093
190177 hypothetical VV10468 Response regulator
contains a CheY-like receiver domain and a winged-helix DNA-binding domain; COG0745
genbank 27363935 NP_759463.1 229 467204 467893
190178 rdgC hypothetical VV10469 recombination associated protein
Required for efficient pilin antigenic variation
genbank 27363936 NP_759464.1 298 468130 469026
190179 hypothetical VV10470 Putative protease
COG0826
genbank 27363937 NP_759465.1 446 469229 470569
190180 hypothetical VV10471 Ferredoxin
COG1145
genbank 27363938 NP_759466.1 84 470573 470827
190181 mepA hypothetical VV10472 penicillin-insensitive murein endopeptidase
D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in peiplasm
genbank 27363939 NP_759467.1 255 470862 471629
190182 hypothetical VV10482 ClpB protein
COG0542
genbank 27363946 NP_759474.1 857 477719 480292
190183 hypothetical VV10483 hypothetical protein
COG1496
genbank 27363947 NP_759475.1 238 480409 481125
190184 hypothetical VV10484 Pseudouridylate synthase, 23S RNA-specific
COG0564
genbank 27363948 NP_759476.1 325 481129 482106
190185 hypothetical VV10485 DNA uptake lipoprotein
COG4105
genbank 27363949 NP_759477.1 241 482244 482969
190186 hypothetical VV10486 Ribosome-associated protein Y
PSrp-1; COG1544
genbank 27363950 NP_759478.1 107 483322 483645
190187 hypothetical VV10487 Prephenate dehydratase
Chorismate mutase; COG1605; COG0077
genbank 27363951 NP_759479.1 392 483889 485067
190188 hypothetical VV10488 hypothetical protein
COG1986
genbank 27363952 NP_759480.1 183 485077 485628
190189 hypothetical VV10489 Trp operon repressor
When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription
genbank 27363953 NP_759481.1 102 485659 485967
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190190 hypothetical VV10490 Soluble lytic murein transglycosylase
COG0741
genbank 27363954 NP_759482.1 633 485983 487884
190191 hypothetical VV10491 ATPase component of ABC transporter with duplicated ATPase domains
COG0488
genbank 27363955 NP_759483.1 555 488255 489922
190192 hypothetical VV10492 hypothetical protein genbank 27363956 NP_759484.1 114 490069 490413
190193 hypothetical VV10493 Membrane protein
similar to to metalloendopeptidase; TagE; COG0739
genbank 27363957 NP_759485.1 328 490460 491446
190194 hypothetical VV10494 Prephenate dehydrogenase
Chorismate mutase; COG1605; COG0287
genbank 27363958 NP_759486.1 375 491519 492646
190195 hypothetical VV10495 3-deoxy-7-phosphoheptulonate synthase
catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate
genbank 27363959 NP_759487.1 356 492666 493736
190196 hypothetical VV10496 beta-hexosaminidase
hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
genbank 27363960 NP_759488.1 328 493932 494918
190197 hypothetical VV10497 Predicted molecular chaperone
similar to to HSP70-fold metalloproteases; COG2377
genbank 27363961 NP_759489.1 387 494970 496133
190198 hypothetical VV10498 NhaP-type Na+/H+ and K+/H+ antiporters
COG0025
genbank 27363962 NP_759490.1 598 496175 497971
190199 hypothetical VV10499 hypothetical protein genbank 27363963 NP_759491.1 113 497998 498339
190200 hypothetical VV10500 hypothetical protein genbank 27363964 NP_759492.1 63 498349 498540
190201 hypothetical VV10501 Carbon starvation protein, predicted membrane protein
COG1966
genbank 27363965 NP_759493.1 494 498576 500060
190202 hypothetical VV10502 Putative regulator of cell autolysis
COG3275
genbank 27363966 NP_759494.1 560 500229 501911
190203 hypothetical VV10503 Response regulator of the LytR/AlgR family
COG3279
genbank 27363967 NP_759495.1 242 501931 502659
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190204 hypothetical VV10504 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
catalzes the conversion 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate
genbank 27363968 NP_759496.1 320 502728 503690
190205 hypothetical VV10505 FKBP-type peptidyl-prolyl cis-trans isomerase 2
COG1047
genbank 27363969 NP_759497.1 126 503711 504091
190206 lspA hypothetical VV10506 signal peptidase II
lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
genbank 27363970 NP_759498.1 168 504384 504890
190207 hypothetical VV10507 isoleucyl-tRNA synthetase
catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)
genbank 27363971 NP_759499.1 948 504969 507815
190208 hypothetical VV10508 hypothetical protein
COG0196
genbank 27363972 NP_759500.1 311 507880 508815
190209 hypothetical VV10509 Putative virulence factor
MviN; COG0728
genbank 27363973 NP_759501.1 511 508887 510422
190210 rpsT hypothetical VV10511 30S ribosomal protein S20
binds directly to the 16S ribosomal RNA
genbank 27363974 NP_759502.1 86 510700 510960
190211 hypothetical VV10512 Transcription activator HlyU
COG0640
genbank 27363975 NP_759503.1 98 511083 511379
190212 hypothetical VV10513 Transcription activator NhaR
COG0583
genbank 27363976 NP_759504.1 283 511508 512359
190213 hypothetical VV10514 Na+/phosphate symporter
NptA; COG1283
genbank 27363977 NP_759505.1 386 512768 513928
190214 hypothetical VV10515 hypothetical protein
COG3930
genbank 27363978 NP_759506.1 381 514051 515196
190215 hypothetical VV10516 thymidylate synthase
catalyzes the formation of dihydrofolate from 5,10-methylenetetrahydrofolate
genbank 27363979 NP_759507.1 283 515255 516106
190216 hypothetical VV10517 prolipoprotein diacylglyceryl transferase
transfers the N-acyl diglyceride moiety to the prostepctive N-terminalcysteine in prolipoprotein
genbank 27363980 NP_759508.1 243 516116 516847
190217 hypothetical VV10518 Predicted permease
COG0730
genbank 27363981 NP_759509.1 263 516971 517762
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190218 hypothetical VV10519 Phosphoenolpyruvate-protein phosphotransferase
COG3605
genbank 27363982 NP_759510.1 696 517769 519859
190219 hypothetical VV10520 dinucleoside polyphosphate hydrolase
Hydrolyzes diadenosine polyphosphate
genbank 27363983 NP_759511.1 172 520018 520536
190220 hypothetical VV10521 DNA mismatch repair protein
MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair
genbank 27363984 NP_759512.1 227 521155 521838
190221 hypothetical VV10522 hypothetical protein genbank 27363985 NP_759513.1 103 521825 522136
190222 hypothetical VV10523 Oxidoreductase Tas, aldo/keto reductase family
COG0667
genbank 27363986 NP_759514.1 344 522345 523379
190223 hypothetical VV10524 hypothetical protein genbank 27363987 NP_759515.1 83 523419 523670
190224 hypothetical VV10525 Sigma-54 dependent transcriptional regulator
VpsR; COG1221
genbank 27363988 NP_759516.1 444 524182 525516
190225 lysS hypothetical VV10526 lysyl-tRNA synthetase
catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
genbank 27363989 NP_759517.1 510 525715 527247
190226 hypothetical VV10527 Protein chain release factor B
COG1186
genbank 27363990 NP_759518.1 289 527280 528149
190227 hypothetical VV10528 Single-stranded DNA-specific exonuclease
COG0608
genbank 27363991 NP_759519.1 561 528522 530207
190228 hypothetical VV10529 Protein-disulfide isomerase
COG1651
genbank 27363992 NP_759520.1 246 530313 531053
190229 hypothetical VV10530 tyrosine recombinase
Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from xerC binding sites by a short central region, forming t
genbank 27363993 NP_759521.1 305 531125 532042
190230 hypothetical VV10531 flavodoxin
An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
genbank 27363994 NP_759522.1 172 532202 532720
190231 hypothetical VV10532 Branched-chain amino acid permease
COG1114
genbank 27363995 NP_759523.1 437 532832 534145
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190232 hypothetical VV10533 Predicted O-methyltransferase
COG4123
genbank 27363996 NP_759524.1 239 534454 535173


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