LOCUS NP_294814 356 aa linear BCT 21-JUL-2008
DEFINITION GGDEF family protein [Deinococcus radiodurans R1].
ACCESSION NP_294814
VERSION NP_294814.1 GI:15806110
DBSOURCE REFSEQ: accession NC_001263.1
KEYWORDS .
SOURCE Deinococcus radiodurans R1
ORGANISM Deinococcus radiodurans R1
Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales;
Deinococcaceae; Deinococcus.
REFERENCE 1 (residues 1 to 356)
AUTHORS White,O., Eisen,J.A., Heidelberg,J.F., Hickey,E.K., Peterson,J.D.,
Dodson,R.J., Haft,D.H., Gwinn,M.L., Nelson,W.C., Richardson,D.L.,
Moffat,K.S., Qin,H., Jiang,L., Pamphile,W., Crosby,M., Shen,M.,
Vamathevan,J.J., Lam,P., McDonald,L., Utterback,T., Zalewski,C.,
Makarova,K.S., Aravind,L., Daly,M.J., Minton,K.W.,
Fleischmann,R.D., Ketchum,K.A., Nelson,K.E., Salzberg,S.,
Smith,H.O., Venter,J.C. and Fraser,C.M.
TITLE Genome sequence of the radioresistant bacterium Deinococcus
radiodurans R1
JOURNAL Science 286 (5444), 1571-1577 (1999)
PUBMED 10567266
REFERENCE 2 (residues 1 to 356)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-SEP-2001) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 356)
AUTHORS White,O., Eisen,J.A., Heidelberg,J.F., Hickey,E.K., Peterson,J.D.,
Dodson,R.J., Haft,D.H., Gwinn,M.L., Nelson,W.C., Richardson,D.L.,
Moffat,K.S., Qin,H., Jiang,L., Pamphile,W., Crosby,M., Shen,M.,
Vamathevan,J.J., Lam,P., McDonald,L., Utterback,T., Zalewski,C.,
Makarova,K.S., Aravind,L., Daly,M.J., Minton,K.W.,
Fleischmann,R.D., Ketchum,K.A., Nelson,K.E., Salzberg,S.,
Smith,H.O., Venter,J.C. and Fraser,C.M.
TITLE Direct Submission
JOURNAL Submitted (08-NOV-1999) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AAF10664.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..356
/organism="Deinococcus radiodurans R1"
/strain="R1"
/db_xref="taxon:243230"
/chromosome="1"
Protein 1..356
/product="GGDEF family protein"
/calculated_mol_wt=39156
Region <52..107
/region_name="5TM-5TMR_LYT"
/note="5TMR of 5TMR-LYT; pfam07694"
/db_xref="CDD:116308"
Region 199..344
/region_name="GGDEF"
/note="Diguanylate-cyclase (DGC) or GGDEF domain:
Originally named after a conserved residue pattern, and
initially described as domain of unknown function 1
(DUF1). It is widely present in bacteria and often links
to a wide range of non-homologous domains in...; cd01949"
/db_xref="CDD:30164"
Site order(233,236..237,241,245,267,269..272)
/site_type="active"
/db_xref="CDD:30164"
Site order(260,263,291)
/site_type="other"
/note="I-site"
/db_xref="CDD:30164"
CDS 1..356
/locus_tag="DR_1090"
/coded_by="NC_001263.1:1098196..1099266"
/note="similar to PID:576655 PID:576657 percent identity:
61.73; identified by sequence similarity; putative"
/transl_table=11
/db_xref="GeneID:1797629"
ORIGIN
1 mlltliinfc llttmmylls ltyksaedit ataihvprll llavmavvlm lypaevapgv
61 iidmravpia ylalrkgvwa gllaliplll yrfhlggvgt wsavfsavgv vllggllhrs
121 vdlsaprldw rslwwrlllv fmpngilipv lrgdpaallt vylpllvvty agflvslgiq
181 rnryrllsli atyeqqahqd alsdlpnrrq fdldfvrmdv gdllclvdid hfkkindtyg
241 haagdevltq lggvlkgrlr shdqayrygg eefavifrsp gnaapellae rlrqavehts
301 ftalaghplt vsigvtrrga apldtcflea dqalyaakta grnqvrvwpl eqppea
//