Vibrio parahaemolyticus RIMD 2210633 chromosome I

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184901-185000 (1-100) 185001-185100 (101-200) 185101-185200 (201-300) 185201-185300 (301-400) 185301-185400 (401-500)
185401-185500 (501-600) 185501-185600 (601-700) 185601-185700 (701-800) 185701-185800 (801-900) 185801-185900 (901-1000)
185901-186000 (1001-1100) 186001-186100 (1101-1200) 186101-186200 (1201-1300) 186201-186300 (1301-1400) 186301-186400 (1401-1500)
186401-186500 (1501-1600) 186501-186600 (1601-1700) 186601-186700 (1701-1800) 186701-186800 (1801-1900) 186801-186900 (1901-2000)
186901-187000 (2001-2100) 187001-187100 (2101-2200) 187101-187200 (2201-2300) 187201-187300 (2301-2400) 187301-187400 (2401-2500)
187401-187500 (2501-2600) [187501-187600 (2601-2700)] 187601-187700 (2701-2800) 187701-187800 (2801-2900) 187801-187900 (2901-3000)
187901-187980 (3001-3080)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
187501 hypothetical VP2601 D-erythrose 4-phosphate dehydrogenase
catalyzes the formation of 4-phosphoerythronate from D-erythrose 4-phosphate
genbank 28899375 NP_798980.1 345 2743901 2744938
187502 hypothetical VP2602 iron-regulated outer membrane virulence protein homolog
similar to DBJ:BAB60695.1 (AB052655) percent identity 99 in 652 aa
genbank 28899376 NP_798981.1 652 2745069 2747027
187503 hypothetical VP2603 iron-regulated virulence regulatory protein homolog
similar to DBJ:BAB60694.1 (AB052655) percent identity 100 in 297 aa
genbank 28899377 NP_798982.1 297 2747164 2748057
187504 hypothetical VP2605 transketolase
catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyxeraldehyde 3-phosphate
genbank 28899378 NP_798983.1 664 2748135 2750129
187505 hypothetical VP2604 hypothetical protein
unknown
genbank 28899379 NP_798984.1 76 2750128 2750358
187506 hypothetical VP2606 S-adenosylmethionine synthetase
methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP
genbank 28899380 NP_798985.1 384 2750446 2751600
187507 hypothetical VP2607 putative cytochrome c oxidase, subunit I
similar to GB:AAK64982.1 (AE007224) percent identity 34 in 234 aa
genbank 28899381 NP_798986.1 265 2751945 2752742
187508 hypothetical VP2608 hypothetical protein
similar to GB:AAF93644.1 (AE004133) percent identity 62 in 154 aa
genbank 28899382 NP_798987.1 165 2752809 2753306
187509 hypothetical VP2609 extracellular deoxyribonuclease precursor
similar to GB:AAF19759.1 (AF063303) percent identity 79 in 226 aa
genbank 28899383 NP_798988.1 231 2753426 2754121
187510 hypothetical VP2610 hypothetical protein
similar to GB:AAF93642.1 (AE004133) percent identity 88 in 243 aa
genbank 28899384 NP_798989.1 243 2754246 2754977
187511 hypothetical VP2611 glutathione synthetase
The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
genbank 28899385 NP_798990.1 316 2754992 2755942
187512 hypothetical VP2612 hypothetical protein
similar to GB:AAF93640.1 (AE004133) percent identity 74 in 187 aa
genbank 28899386 NP_798991.1 189 2756050 2756619
187513 hypothetical VP2613 Holliday junction resolvase-like protein
similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
genbank 28899387 NP_798992.1 141 2756668 2757093
187514 hypothetical VP2614 twitching motility protein PilT
similar to GB:AAF93636.1 (AE004132) percent identity 83 in 368 aa
genbank 28899388 NP_798993.1 368 2757118 2758224
187515 hypothetical VP2615 twitching motility protein PilT
similar to GB:AAF93635.1 (AE004132) percent identity 87 in 345 aa
genbank 28899389 NP_798994.1 346 2758255 2759295
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
187516 hypothetical VP2616 FkuA
similar to DBJ:BAA09062.1 (D50472) percent identity 93 in 233 aa
genbank 28899390 NP_798995.1 237 2759324 2760037
187517 hypothetical VP2617 pyrroline-5-carboxylate reductase
catalyzes the formation of L-proline from pyrroline-5-carboxylate
genbank 28899391 NP_798996.1 272 2760157 2760975
187518 hypothetical VP2618 FkuB
similar to DBJ:BAA09064.1 (D50472) percent identity 95 in 185 aa
genbank 28899392 NP_798997.1 185 2761028 2761585
187519 hypothetical VP2619 hypothetical protein
similar to GB:AAF93631.1 (AE004132) percent identity 72 in 94 aa
genbank 28899393 NP_798998.1 96 2761585 2761875
187520 hypothetical VP2620 hypothetical protein
similar to GB:AAF93630.1 (AE004132) percent identity 67 in 143 aa
genbank 28899394 NP_798999.1 143 2762003 2762434
187521 hypothetical VP2621 putative deoxyribonucleotide triphosphate pyrophosphatase
HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
genbank 28899395 NP_799000.1 200 2762552 2763154
187522 hypothetical VP2622 coproporphyrinogen III oxidase
catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
genbank 28899396 NP_799001.1 392 2763173 2764351
187523 hypothetical VP2623 glutaminase
catalyzes the formation of glutamate from glutamine
genbank 28899397 NP_799002.1 306 2764413 2765333
187524 hypothetical VP2624 hypothetical protein
similar to DBJ:BAB82300.1 (AP003194) percent identity 60 in 342 aa
genbank 28899398 NP_799003.1 342 2765426 2766454
187525 hypothetical VP2625 tRNA (guanine-N(7)-)-methyltransferase
catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
genbank 28899399 NP_799004.1 239 2766466 2767185
187526 hypothetical VP2626 A/G-specific adenine glycosylase
similar to GB:AAF93625.1 (AE004132) percent identity 75 in 357 aa
genbank 28899400 NP_799005.1 358 2767389 2768465
187527 hypothetical VP2627 hypothetical protein
similar to GB:AAF93624.1 (AE004132) percent identity 87 in 90 aa
genbank 28899401 NP_799006.1 90 2768485 2768757
187528 hypothetical VP2628 membrane-bound lytic murein transglycosylase C
similar to GB:AAF93623.1 (AE004132) percent identity 83 in 375 aa
genbank 28899402 NP_799007.1 379 2768846 2769985
187529 hypothetical VP2629 methyl-accepting chemotaxis protein
similar to GB:AAF93622.1 (AE004132) percent identity 78 in 539 aa
genbank 28899403 NP_799008.1 541 2771153 2772778
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
187530 hypothetical VP2630 succinate-semialdehyde dehydrogenase
similar to GB:AAK03620.1 (AE006190) percent identity 53 in 452 aa
genbank 28899404 NP_799009.1 477 2773653 2775086
187531 hypothetical VP2631 putative HD-GYP hydrolase domain containing protein
similar to GB:AAF95639.1 (AE004319) percent identity 72 in 417 aa
genbank 28899405 NP_799010.1 417 2781776 2783029
187532 hypothetical VP2632 transcriptional regulator, LacI family
similar to GB:AAF94445.1 (AE004208) percent identity 77 in 333 aa
genbank 28899406 NP_799011.1 336 2783178 2784188
187533 hypothetical VP2633 hypothetical protein
similar to GB:AAF94444.1 (AE004207) percent identity 62 in 245 aa
genbank 28899407 NP_799012.1 251 2784294 2785049
187534 hypothetical VP2634 6-phospho-beta-glucosidase
similar to GB:AAF94443.1 (AE004207) percent identity 86 in 438 aa
genbank 28899408 NP_799013.1 440 2785068 2786390
187535 hypothetical VP2635 PTS system, cellobiose-specific IIA component
similar to GB:AAF94442.1 (AE004207) percent identity 83 in 103 aa
genbank 28899409 NP_799014.1 103 2786401 2786712
187536 hypothetical VP2636 PTS system, cellobiose-specific IIC component
similar to GB:AAF94441.1 (AE004207) percent identity 90 in 447 aa
genbank 28899410 NP_799015.1 447 2786762 2788105
187537 hypothetical VP2637 PTS system, cellobiose-specific IIB component
similar to GB:AAF94440.1 (AE004207) percent identity 92 in 101 aa
genbank 28899411 NP_799016.1 101 2788183 2788488
187538 hypothetical VP2638 deacetylase DA1
similar to EMB:CAC29092.1 (AJ292005) percent identity 99 in 427 aa
genbank 28899412 NP_799017.1 427 2788736 2790019
187539 hypothetical VP2639 putative short-chain dehydrogenase
similar to GB:AAG04047.1 (AE004500) percent identity 31 in 215 aa
genbank 28899413 NP_799018.1 221 2790596 2791261
187540 hypothetical VP2640 hypothetical protein
similar to GB:AAK03181.1 (AE006150) percent identity 35 in 423 aa
genbank 28899414 NP_799019.1 422 2791565 2792833
187541 hypothetical VP2641 hypothetical protein
similar to GB:AAF95640.1 (AE004319) percent identity 71 in 158 aa
genbank 28899415 NP_799020.1 159 2793015 2793494
187542 hypothetical VP2642 putative permease
similar to GB:AAF95641.1 (AE004319) percent identity 77 in 356 aa
genbank 28899416 NP_799021.1 356 2793544 2794614
187543 hypothetical VP2643 putative permease
similar to GB:AAF95642.1 (AE004319) percent identity 76 in 366 aa
genbank 28899417 NP_799022.1 366 2794618 2795718
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
187544 hypothetical VP2644 leucyl aminopeptidase
catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
genbank 28899418 NP_799023.1 502 2795920 2797428
187545 hypothetical VP2645 DNA polymerase III subunit chi
binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
genbank 28899419 NP_799024.1 149 2797543 2797992
187546 hypothetical VP2646 valyl-tRNA synthetase
catalyzes the formation of valyl-tRNA(Val) from valine and tRNA(Val)
genbank 28899420 NP_799025.1 952 2798087 2800945
187547 hypothetical VP2647 hypothetical protein
similar to GB:AAF93599.1 (AE004130) percent identity 66 in 127 aa
genbank 28899421 NP_799026.1 134 2801156 2801560
187548 hypothetical VP2648 putative acetyltransferase
similar to GB:AAL23292.1 (AE008910) percent identity 64 in 157 aa
genbank 28899422 NP_799027.1 172 2802058 2802576
187549 hypothetical VP2649 hypothetical protein
similar to GB:AAF93598.1 (AE004130) percent identity 63 in 266 aa
genbank 28899423 NP_799028.1 266 2802596 2803396
187550 hypothetical VP2650 hypothetical protein
similar to GB:AAF93597.1 (AE004130) percent identity 86 in 137 aa
genbank 28899424 NP_799029.1 137 2803543 2803956
187551 hypothetical VP2651 hypothetical protein
unknown
genbank 28899425 NP_799030.1 45 2803992 2804129
187552 hypothetical VP2652 arginine deiminase
catalyzes the degradation of arginine to citruline and ammonia
genbank 28899426 NP_799031.1 407 2804532 2805755
187553 hypothetical VP2653 ornithine carbamoyltransferase
catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
genbank 28899427 NP_799032.1 334 2805911 2806915
187554 pyrB hypothetical VP2654 aspartate carbamoyltransferase catalytic subunit
Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate
genbank 28899428 NP_799033.1 309 2807192 2808121
187555 hypothetical VP2655 aspartate carbamoyltransferase regulatory subunit
Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate
genbank 28899429 NP_799034.1 153 2808137 2808598
187556 hypothetical VP2656 hypothetical protein
similar to GB:AAF95654.1 (AE004321) percent identity 90 in 129 aa
genbank 28899430 NP_799035.1 129 2808762 2809151
187557 hypothetical VP2657 1-acyl-sn-glycerol-3-phosphate acyltransferase
similar to GB:AAF95655.1 (AE004321) percent identity 79 in 239 aa
genbank 28899431 NP_799036.1 241 2809226 2809951
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
187558 hypothetical VP2658 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation
genbank 28899432 NP_799037.1 418 2810107 2811363
187559 hypothetical VP2659 BolA/YrbA family protein
similar to GB:AAF95657.1 (AE004321) percent identity 76 in 84 aa
genbank 28899433 NP_799038.1 84 2811373 2811627
187560 hypothetical VP2660 putative anti-sigma B factor antagonist
similar to GB:AAF95658.1 (AE004321) percent identity 59 in 99 aa
genbank 28899434 NP_799039.1 106 2811631 2811951
187561 hypothetical VP2661 hypothetical protein
similar to GB:AAF95659.1 (AE004321) percent identity 69 in 212 aa
genbank 28899435 NP_799040.1 212 2811951 2812589
187562 hypothetical VP2662 putative ABC superfamily transport protein
similar to GB:AAF95660.1 (AE004321) percent identity 81 in 162 aa
genbank 28899436 NP_799041.1 162 2812592 2813080
187563 hypothetical VP2663 putative ABC superfamily transport protein
similar to GB:AAF95661.1 (AE004321) percent identity 87 in 258 aa
genbank 28899437 NP_799042.1 263 2813083 2813874
187564 hypothetical VP2664 ABC transporter, ATP-binding protein
similar to GB:AAF95662.1 (AE004321) percent identity 83 in 267 aa
genbank 28899438 NP_799043.1 267 2813864 2814667
187565 hypothetical VP2665 putative sodium/calcium exchanger protein
similar to GB:AAF95664.1 (AE004322) percent identity 76 in 319 aa
genbank 28899439 NP_799044.1 321 2815056 2816021
187566 hypothetical VP2666 putative polysialic acid capsule expression protein
similar to GB:AAF95665.1 (AE004322) percent identity 78 in 324 aa
genbank 28899440 NP_799045.1 323 2816058 2817029
187567 hypothetical VP2667 hypothetical protein
similar to GB:AAF95667.1 (AE004322) percent identity 57 in 187 aa
genbank 28899441 NP_799046.1 187 2817120 2817683
187568 hypothetical VP2668 putative ABC superfamily transport protein
similar to GB:AAF95668.1 (AE004322) percent identity 56 in 163 aa
genbank 28899442 NP_799047.1 164 2817664 2818158
187569 hypothetical VP2669 ABC transporter, ATP-binding protein
similar to GB:AAC46369.1 (AF013987) percent identity 92 in 241 aa
genbank 28899443 NP_799048.1 241 2818160 2818885
187570 hypothetical VP2670 DNA-directed RNA polymerase subunit N
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
genbank 28899444 NP_799049.1 488 2818936 2820402
187571 hypothetical VP2671 putative sigma-54 modulation protein
similar to DBJ:BAA21884.1 (AB006709) percent identity 94 in 95 aa
genbank 28899445 NP_799050.1 95 2820427 2820714
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
187572 hypothetical VP2672 nitrogen regulatory IIA protein PtsN
similar to GB:AAF72889.1 (AF227983) percent identity 97 in 148 aa
genbank 28899446 NP_799051.1 148 2820717 2821163
187573 hypothetical VP2673 hypothetical protein
similar to GB:AAF72890.1 (AF227983) percent identity 91 in 287 aa
genbank 28899447 NP_799052.1 287 2821178 2822041
187574 hypothetical VP2674 phosphocarrier protein NPr
similar to GB:AAF95674.1 (AE004322) percent identity 74 in 90 aa
genbank 28899448 NP_799053.1 91 2822044 2822319
187575 hypothetical VP2675 magnesium transporter
similar to GB:AAF95675.1 (AE004322) percent identity 90 in 451 aa
genbank 28899449 NP_799054.1 451 2822539 2823894
187576 hypothetical VP2676 PmbA protein
similar to GB:AAF95676.1 (AE004322) percent identity 86 in 447 aa
genbank 28899450 NP_799055.1 447 2823971 2825314
187577 hypothetical VP2677 hypothetical protein
similar to GB:AAF95677.1 (AE004323) percent identity 77 in 168 aa
genbank 28899451 NP_799056.1 175 2825425 2825952
187578 hypothetical VP2678 D-lactate dehydrogenase
Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes
genbank 28899452 NP_799057.1 320 2826025 2826987
187579 hypothetical VP2679 ribosomal large subunit pseudouridine synthase A
similar to GB:AAF95647.1 (AE004320) percent identity 72 in 247 aa
genbank 28899453 NP_799058.1 250 2827022 2827774
187580 hypothetical VP2680 hypothetical protein
unknown
genbank 28899454 NP_799059.1 38 2827821 2827937
187581 hypothetical VP2681 putative manganese transporter
similar to GB:AAK02765.1 (AE006104) percent identity 51 in 402 aa
genbank 28899455 NP_799060.1 421 2828103 2829368
187582 hypothetical VP2682 ATP-dependent helicase HepA
Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on
genbank 28899456 NP_799061.1 969 2829447 2832356
187583 hypothetical VP2683 hypothetical protein
similar to GB:AAF95649.1 (AE004321) percent identity 88 in 458 aa
genbank 28899457 NP_799062.1 458 2832914 2834290
187584 hypothetical VP2684 TldD protein
similar to GB:AAF93595.1 (AE004129) percent identity 88 in 481 aa
genbank 28899458 NP_799063.1 481 2834361 2835806
187585 hypothetical VP2685 putative carbon-nitrogen hydrolase
similar to GB:AAF93594.1 (AE004129) percent identity 58 in 270 aa
genbank 28899459 NP_799064.1 273 2835818 2836639
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
187586 hypothetical VP2686 hypothetical protein
similar to GB:AAF93593.1 (AE004129) percent identity 61 in 1293 aa
genbank 28899460 NP_799065.1 1292 2836674 2840552
187587 hypothetical VP2687 cytoplasmic axial filament protein
similar to GB:AAF93592.1 (AE004129) percent identity 92 in 489 aa
genbank 28899461 NP_799066.1 489 2840564 2842033
187588 maf hypothetical VP2688 Maf-like protein
overexpression in Bacillus subtilis inhibits septation in the dividing cell
genbank 28899462 NP_799067.1 189 2842052 2842621
187589 hypothetical VP2689 rod shape-determining protein MreD
similar to GB:AAF93590.1 (AE004129) percent identity 74 in 162 aa
genbank 28899463 NP_799068.1 162 2842626 2843114
187590 hypothetical VP2690 rod shape-determining protein MreC
similar to GB:AAF93589.1 (AE004129) percent identity 78 in 291 aa
genbank 28899464 NP_799069.1 298 2843104 2844000
187591 hypothetical VP2691 rod shape-determining protein MreB
similar to GB:AAC72350.1 (AF079234) percent identity 95 in 347 aa
genbank 28899465 NP_799070.1 347 2844138 2845181
187592 hypothetical VP2692 hypothetical protein
similar to GB:AAF93587.1 (AE004128) percent identity 21 in 458 aa
genbank 28899466 NP_799071.1 1453 2845333 2849694
187593 hypothetical VP2693 putative MshP protein
similar to GB:AAC72348.1 (AF079234) percent identity 28 in 142 aa
genbank 28899467 NP_799072.1 144 2849701 2850135
187594 hypothetical VP2694 putative type IV prepilin, MshO
similar to GB:AAC72347.1 (AF079234) percent identity 31 in 264 aa
genbank 28899468 NP_799073.1 237 2850125 2850838
187595 hypothetical VP2695 putative MSHA pilin protein MshD
similar to GB:AAF93584.1 (AE004128) percent identity 36 in 190 aa
genbank 28899469 NP_799074.1 182 2850839 2851387
187596 hypothetical VP2696 putative MSHA pilin protein MshC
similar to GB:AAF93583.1 (AE004128) percent identity 32 in 153 aa
genbank 28899470 NP_799075.1 161 2851402 2851887
187597 hypothetical VP2697 putative MSHA pilin protein MshA
unknown
genbank 28899471 NP_799076.1 80 2852003 2852245
187598 hypothetical VP2698 putative V10 pilin
similar to DBJ:BAB58971.1 (AB047757) percent identity 58 in 169 aa
genbank 28899472 NP_799077.1 165 2852305 2852802
187599 hypothetical VP2699 putative MSHA biogenesis protein MshF
similar to GB:AAF93580.1 (AE004128) percent identity 24 in 144 aa
genbank 28899473 NP_799078.1 153 2853097 2853558
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
187600 hypothetical VP2700 MSHA biogenesis protein MshG
similar to GB:AAF93579.1 (AE004128) percent identity 71 in 407 aa
genbank 28899474 NP_799079.1 407 2853562 2854785


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