Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss397342	KWOK|OVLP-000621-235536		fwd/B	A/T	accccttcaccacatcatgtgctgccagtc	tcacttctgctgttgccaccaaccctcgcg	06/30/00	10/10/03	79	Genomic			99 %
ss750867	SC_JCM|AC011999.4_78574		fwd/B	A/T	accccttcaccacatcatgtgctgccagtc	tcacttctgctgttgccaccaacccttgcg	07/27/00	10/10/03	85	Genomic			unknown
ss1156506	KWOK|OVLP-000804-484641		fwd/B	A/T	accccttcaccacatcatgtgctgccagtc	tcacttctgctgttgccaccaaccctcgcg	09/02/00	10/10/03	86	Genomic			99 %
ss1708885	KWOK|OVLP-000925-573382		fwd/B	A/T	accccttcaccacatcatgtgctgccagtc	tcacttctgctgttgccaccaaccctcgcg	10/05/00	08/14/07	87	Genomic			99 %
ss44362425	ABI|hCV1061811		fwd/	A/T	accccttcaccacatcatgtgctgccagtc	tcacttctgctgttgccaccaacccttgcg	07/18/05	07/18/05	126	Genomic			unknown
ss66479538	AFFY|SNP_A-2290327		rev/T	A/T	gcaacagcagaagtga	gactggcagcacatga	10/29/06	08/14/07	127	Genomic			unknown
ss76294069	AFFY|AFFY_6_1M_SNP_A-2290327		rev/	A/T	gcaacagcagaagtga	gactggcagcacatga	08/28/07	08/30/07	129	Genomic			unknown

Fasta sequence   (Legend)

 CTTTGCATAG AGTCAACGTT GAAGGACAAG CAACTTCAAA TTTCCAAGCA ACAAAATTAT
 GTTCGGGTGG TTTTCTGAAA GCGAGATCTT AAGAACCACC TGTATCAGAA TCCCATGAAG
 AGCTTGTTTA GTGTGCAAAT TTACAGATTG TCCCCCCTCA GAAATGCTCA TTTAGgagtt
 cctgtccttt gcggggacat ggatgaagct ggaaaccatc attctcagca aactaacaca
 ggaacagaaa accaaacact gcatgttctc actcaaaagt gggagttgaa caatgagaac
 acatggacac agggagggga acgtcacaca ccagggcctg tcgggggtgg gaggtaaggg
 gagggagagg attaggacaa atacctaatg catgtggggc ttaaaaccta gatgatgggt
 tgataggtgc agcaaaccac catggacatg tatacctatg taacaaactt gcatgttcag
 tacatgtatc ccagaactta aagtaaaata TAAACCAATA ATAAAAAGGA AATGCTCATT
 CAGGAGTTTT GGGGTGGGGG TTCAGGAGGC TGCAGCCTTA ACAATTACCT CTGGTGATTT
 TGACACAGGT AGCACAGCAG CCAAACTTGG AGAGATTTGT TCACAGCACT GCATCACCAA
 CCTTACTTTC TGTTAGGCCT TTAATCACtt tttttttttt tttttttttc tgagacaggg
 tcttgctcta tcacccaggc tggagtacag tggcacgatc ttggctcact gcaatctctg
 tatcctgggt tcaagcaatc ctctctgcct tggcctcctg agtagctggg accacagaca
 tgctccatta tgcccaacta attaaaaaca ttttttttag aggcaggctg gtctcgaact
 cctgagctca agcaatctgc ctgcctcggc ctcccaaagt gctgggatta caggtgtgag
 ccactgcgcc cggccTTTTA ATCACTTTTA AACCAGCAAC CCTAATCTGC CTGTCCCTTG
 AATGGATCCG GATAAAGGTG TGGCAAACAA GCCTCCTGTC ACAGTGGGGT GTGACAGTCA
 CGGCATCACC CCTTCACCAC ATCATGTGCT GCCAGTC
 W
 TCACTTCTGC TGTTGCCACC AACCCTCGCG TTTCCCTTTG TCACTTCCCC CTTGCCACCA
 CCAACGGCCA CTGTCCCTCT GCTCCTCACC CTCCATAGCT GAGTCAGATC CAGCATTGGG
 CACTTGAGGA AGAAGCCACT GTGGAAGGCG GGATGAGGGT GTTCCCATTC TACATTCACA
 AGCCCACAGC TTGGAGAAGA

GeneView

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail			Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/T	HWP	A	T
ss1708885	HapMap-CEU	European	120	IG	1.000			1.000
	HapMap-HCB	Asian	90	IG	1.000			1.000
	HapMap-JPT	Asian	90	IG	1.000			1.000
	HapMap-YRI	Sub-Saharan African	116	IG	0.862	0.138		0.931	0.069
ss66479538	HapMap-CEU	European	118	GF	1.000			1.000
	HapMap-HCB	Asian	90	GF	0.978	0.022		0.989	0.011
	HapMap-JPT	Asian	90	GF	1.000			1.000
	HapMap-YRI	Sub-Saharan African	120	GF	0.850	0.150		0.925	0.075
ss750867	TSC_42_AA		84	AF				1.000
	TSC_42_C		84	AF				1.000
	TSC_42_A		84	AF				1.000

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
	UNKNOWN	UNKNOWN	UNKNOWN