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An organized view of the transcripome



Library:1389 (dbEST ID)

Mouse unfertilized egg cDNA

Library Description

Organism:Mus musculus
Strain:C57BL/6J
Developmental stage:unfertilized egg

Source: Hirofumi Doi, Japan Science and Technology Corporation (JST)

Gene Content Analysis

2,088 ESTs from this library were grouped into 1,201 UniGene entries (putative genes) [UniGene build #178, 06-Feb-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs TPM   UniGene Entry
1 479 Mm.477473 SET domain, bifurcated 1.
1 479 Mm.477470 Mortality factor 4 like 1.
1 479 Mm.476879 Predicted gene, 100040847.
1 479 Mm.476831 Serine/arginine-rich protein specific kinase 1.
1 479 Mm.476779 Cleavage and polyadenylation specific factor 6.
1 479 Mm.476732 Phosphoglycerate mutase 1.
1 479 Mm.476015 Motile sperm domain containing 1.
1 479 Mm.475978 Proteasome (prosome, macropain) activator subunit 4.
1 479 Mm.475098 X-linked lymphocyte-regulated 3A.
1 479 Mm.474972 Sal-like 4 (Drosophila).
1 479 Mm.474729 Transcribed locus, strongly similar to NP_001025991.1 Nedd4 family interacting protein 2 [Gallus gallus].
1 479 Mm.474505 Transcribed locus, strongly similar to NP_031531.1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 [Mus musculus].
1 479 Mm.474462 Atlastin GTPase 1.
1 479 Mm.4742 Proliferation-associated 2G4.
1 479 Mm.474046 Transcribed locus.
1 479 Mm.474033 Transcribed locus.
1 479 Mm.473923 Transcribed locus.
1 479 Mm.473861 Transcribed locus.
1 479 Mm.473860 Transcribed locus, strongly similar to NP_060736.1 transmembrane protein 39A [Homo sapiens].
1 479 Mm.473838 Transcribed locus, strongly similar to XP_001473196.1 PREDICTED: similar to spermine synthase [Mus musculus].
1 479 Mm.473809 Transcribed locus.
1 479 Mm.473755 Bone morphogenetic protein 5.
1 479 Mm.473722 Expressed sequence AU022252.
1 479 Mm.473703 Carnitine deficiency-associated gene expressed in ventricle 3.
1 479 Mm.473316 Transcribed locus.
1 479 Mm.473315 Transcribed locus.
1 479 Mm.473006 Transcribed locus.
1 479 Mm.472991 Transcribed locus.
1 479 Mm.472967 Transcribed locus.
1 479 Mm.472869 Transcribed locus.
1 479 Mm.471993 Transcribed locus.
1 479 Mm.471930 Transcribed locus, strongly similar to NP_077183.1 pyruvate dehydrogenase (lipoamide) beta [Mus musculus].
1 479 Mm.471849 Transcribed locus.
1 479 Mm.471790 Transcribed locus.
1 479 Mm.471789 Transcribed locus.
1 479 Mm.471626 AE binding protein 2.
1 479 Mm.471013 Transcribed locus.
1 479 Mm.470568 Transcribed locus.
1 479 Mm.470167 Transcribed locus.
1 479 Mm.470166 Transcribed locus, strongly similar to XP_001481202.1 PREDICTED: hypothetical protein [Mus musculus].
1 479 Mm.470123 Transcribed locus.
1 479 Mm.470119 Transcribed locus.
1 479 Mm.469937 X-box binding protein 1.
1 479 Mm.468860 Transcribed locus.
1 479 Mm.468787 Transcribed locus.
1 479 Mm.468220 Transcribed locus, strongly similar to NP_904339.1 NADH dehydrogenase subunit 6 [Mus musculus].
1 479 Mm.466977 Transcribed locus.
1 479 Mm.466849 Transcribed locus, moderately similar to NP_904331.1 cytochrome c oxidase subunit II [Mus musculus].
1 479 Mm.466827 Transcribed locus, moderately similar to NP_904338.1 NADH dehydrogenase subunit 5 [Mus musculus].
1 479 Mm.465448 Transcribed locus.
1 479 Mm.465444 Transcribed locus.
1 479 Mm.46424 Mediator of RNA polymerase II transcription, subunit 11 homolog (S. cerevisiae).
1 479 Mm.4618 Trans-acting transcription factor 1.
1 479 Mm.459313 Transcribed locus.
1 479 Mm.459312 Transcribed locus, moderately similar to NP_002037.2 glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens].
1 479 Mm.459311 Transcribed locus.
1 479 Mm.459310 Transcribed locus.
1 479 Mm.459309 Transcribed locus.
1 479 Mm.459275 Transcribed locus, moderately similar to NP_904329.1 NADH dehydrogenase subunit 2 [Mus musculus].
1 479 Mm.459137 Transcribed locus.
1 479 Mm.458830 Oogenesin 1.
1 479 Mm.458807 Expressed sequence C87414.
1 479 Mm.458563 Transcribed locus.
1 479 Mm.458102 Dynein light chain Tctex-type 1.
1 479 Mm.458088 Ribosomal protein S27A.
1 479 Mm.454437 Transcribed locus.
1 479 Mm.454139 Transcribed locus, strongly similar to NP_444354.2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Mus musculus].
1 479 Mm.452336 Transcribed locus, strongly similar to NP_001014183.1 isocitrate dehydrogenase 2 (NADP+), mitochondrial [Rattus norvegicus].
1 479 Mm.452067 Transcribed locus, moderately similar to NP_653147.1 flavin containing monooxygenase 4 long isoform [Rattus norvegicus].
1 479 Mm.451950 Transcribed locus.
1 479 Mm.451217 Transcribed locus.
1 479 Mm.450689 Transcribed locus.
1 479 Mm.45039 Leucine rich repeat (in FLII) interacting protein 1.
1 479 Mm.449851 Transcribed locus.
1 479 Mm.4489 Potassium voltage-gated channel, subfamily H (eag-related), member 1.
1 479 Mm.448264 Transcribed locus.
1 479 Mm.445763 A disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17.
1 479 Mm.445691 Transcribed locus.
1 479 Mm.443725 Transcribed locus.
1 479 Mm.443 Methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase.
1 479 Mm.442360 Transcribed locus.
1 479 Mm.44236 F-box protein 7.
1 479 Mm.442359 Transcribed locus.
1 479 Mm.442358 Transcribed locus.
1 479 Mm.442357 Mus musculus, clone IMAGE:6703508, mRNA.
1 479 Mm.442353 Transcribed locus, strongly similar to NP_001094288.1 phosphotyrosine interaction domain containing 1 isoform 2 [Homo sapiens].
1 479 Mm.442351 Transcribed locus.
1 479 Mm.442350 Transcribed locus.
1 479 Mm.442349 Transcribed locus.
1 479 Mm.442341 Transcribed locus.
1 479 Mm.442339 Transcribed locus.
1 479 Mm.442337 Transcribed locus.
1 479 Mm.442335 Transcribed locus.
1 479 Mm.442334 Transcribed locus.
1 479 Mm.442333 Transcribed locus.
1 479 Mm.442332 Transcribed locus.
1 479 Mm.442331 Transcribed locus.
1 479 Mm.442330 Predicted gene, 100040428.
1 479 Mm.442329 Transcribed locus.
1 479 Mm.442328 Predicted gene, 100041986.

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Source: NCBI UniGene

EST Sequences

3,098 EST sequences from this library have been submitted to the public sequence database as of 06-Feb-2009.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

  • ovary
  • unfertilized ovum
  • C57 mouse
  • bulk
  • normal

Source: NCBI Clone Registry



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