R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|1076603|pir||S52203 vsf-1 protein - tomato
Length = 435
Frame 3 hits (HSPs): ________
Annotated Domains: ___________________________________________
__________________________________________________
Database sequence: | | | | 435
0 150 300
__________________
Annotated Domains:
DOMO DM05813: 64..435
Entrez domain: fos/jun DNA-binding domain homol 283..323
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 316..337
__________________
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.043, P = 0.042
Identities = 19/59 (32%), Positives = 32/59 (54%), Frame = +3
Query: 27 AEVRRLRRTVAELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQT 203
AEV+RL+ E E L + M QQ + +FQ+Q QQ P+Q++ + + + + T
Sbjct: 374 AEVQRLKLAAGEHREEGRLPNNMTQQTPVKHNIFQMQRQQ-PSQMQQLSVGKASAASAT 431
>gi|1838976|emb|CAA52015.1| (X73635) vsf-1 [Lycopersicon esculentum]
Length = 444
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 444
0 150 300
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.044, P = 0.043
Identities = 19/59 (32%), Positives = 32/59 (54%), Frame = +3
Query: 27 AEVRRLRRTVAELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQT 203
AEV+RL+ E E L + M QQ + +FQ+Q QQ P+Q++ + + + + T
Sbjct: 383 AEVQRLKLAAGEHREEGRLPNNMTQQTPVKHNIFQMQRQQ-PSQMQQLSVGKASAASAT 440
>gi|3425907|emb|CAA05898.1| (AJ003142) transcription factor VSF-1 [Lycopersicon
esculentum]
Length = 444
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 444
0 150 300
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.044, P = 0.043
Identities = 19/59 (32%), Positives = 32/59 (54%), Frame = +3
Query: 27 AEVRRLRRTVAELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQT 203
AEV+RL+ E E L + M QQ + +FQ+Q QQ P+Q++ + + + + T
Sbjct: 383 AEVQRLKLAAGEHREEGRLPNNMTQQTPVKHNIFQMQRQQ-PSQMQQLSVGKASAASAT 440
>gi|4103794|gb|AAD01858.1| (AF027621) posF21 [Arabidopsis thaliana]
Length = 59
Frame 3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | 59
0 20 40
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 0.18, P = 0.16
Identities = 17/47 (36%), Positives = 24/47 (51%), Frame = +3
Query: 72 ESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQ 212
+++L+++ QQL I Q Q Q QQ Q +H Q Q Q Q Q
Sbjct: 1 QTILAAKQFQQLQIHSQKQQQQQQQQQQQQQHQQQQQQQQQYQFQQQ 47
Score = 66 (23.2 bits), Expect = 0.76, P = 0.53
Identities = 18/49 (36%), Positives = 26/49 (53%), Frame = +3
Query: 72 ESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
+++L+++ QQL I Q Q Q QQ Q +H Q Q+Q Q Q Q
Sbjct: 1 QTILAAKQFQQLQIHSQKQQQQQQQQQQQQQHQQ----QQQQQQQYQFQ 45
>gi|7299036|gb|AAF54238.1| (AE003678) CG11718 gene product [Drosophila
melanogaster]
Length = 819
Frame 3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | 819
0 150 300 450 600 750
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 0.32, P = 0.28
Identities = 21/53 (39%), Positives = 28/53 (52%), Frame = +3
Query: 81 LSSRMAQQL---AISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHNGKAT 239
+ R+ QQL + QQ Q QH+ H L+H Q+ S +Q Q Q Q H G T
Sbjct: 497 MRQRLVQQLHRQRLQQQQLQQQHEPH---LQHQQIARSRTQSQPQKQPTMHEGVLT 549
>gi|7291175|gb|AAF46608.1| (AE003451) CG9817 gene product [Drosophila
melanogaster]
Length = 2090
Frame 3 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | | 2090
0 500 1000 1500 2000
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.34, P = 0.29
Identities = 20/50 (40%), Positives = 24/50 (48%), Frame = +3
Query: 78 LLSSRMAQQLAISQQVFQLQHQQ-HPNQLRHVQLDNSHSQEQTQTQSQCH 224
L + QQ Q Q QHQQ H QL+H QL H+Q+ Q Q H
Sbjct: 948 LHQQQQQQQQQQQQSQHQQQHQQQHAQQLQHQQLQQQHAQQHQQQQHHLH 997
>gi|544374|sp|P36417|GBF_DICDI G-BOX BINDING FACTOR (GBF)
>gi|1076833|pir||A53185 G-box-binding factor - slime mold
(Dictyostelium discoideum) >gi|456562|gb|AAA21021.1| (L29075) G-box
binding factor [Dictyostelium discoideum]
Length = 708
Frame 3 hits (HSPs): ____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 708
0 150 300 450 600
__________________
Annotated Domains:
DOMO DM07531: 228..420
DOMO DM07531: 422..571
Entrez Repetitive region: 1. 339..368
Entrez Repetitive region: 2. 481..510
Entrez Domain: POLY-SER. 11..21
Entrez Domain: GLN-RICH. 115..263
Entrez Domain: POLY-ASN. 270..292
Entrez Domain: POLY-ASN. 549..557
PRODOM PD067741: GBF_DICDI 22..112
PRODOM PD000002: MYSP(25) MYSA(19) INVO(17) 114..239
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 241..452
PRODOM PD109686: GBF_DICDI 454..514
PRODOM PD069892: GBF_DICDI 591..707
__________________
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.35, P = 0.30
Identities = 19/43 (44%), Positives = 23/43 (53%), Frame = +3
Query: 99 QQLAISQQVFQ-LQHQQHPNQLRHVQLDNSHSQEQTQTQSQCH 224
QQ+ QQ Q +Q QQH Q++H QL Q Q Q Q Q H
Sbjct: 160 QQMQQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQH 202
>gi|7292164|gb|AAF47576.1| (AE003472) CG13923 gene product [Drosophila
melanogaster]
Length = 346
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 346
0 150 300
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 0.35, P = 0.30
Identities = 22/54 (40%), Positives = 26/54 (48%), Frame = +3
Query: 69 GESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHNG 230
G +LL QQ I QQ Q QHQQ Q H+ L Q++ Q Q Q H G
Sbjct: 147 GPALLFQERIQQEYIIQQ--QQQHQQIQQQQHHLALLQQQQQQEQQQQIQQHQG 198
>gi|7290746|gb|AAF46192.1| (AE003438) CG14441 gene product [Drosophila
melanogaster]
Length = 1125
Frame 3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1125
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 0.36, P = 0.30
Identities = 22/50 (44%), Positives = 26/50 (52%), Frame = +3
Query: 72 ESLLSSRMAQQLAISQQVFQLQHQQHPNQ-LRH-VQLDNSHSQEQTQTQS 215
E L R Q+L + QQ Q Q QQ Q LRH D SH Q+Q Q Q+
Sbjct: 934 ERLKQQRQQQELLLQQQQQQQQQQQQQQQQLRHHTPADTSHYQQQQQQQT 983
>gi|4103804|gb|AAD01863.1| (AF027626) posF21 [Arabidopsis thaliana]
Length = 60
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | 60
0 20 40
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.36, P = 0.31
Identities = 18/48 (37%), Positives = 26/48 (54%), Frame = +3
Query: 72 ESLLSSRMAQQLAI-SQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQ 212
+++L+++ QQL I SQ+ Q Q QQ Q +H Q Q Q Q Q
Sbjct: 1 QTILAAKQFQQLQIHSQKQQQQQQQQQQQQQQHQQQQQQQQQYQFQQQ 48
Score = 57 (20.1 bits), Expect = 6.8, P = 1.0
Identities = 15/46 (32%), Positives = 20/46 (43%), Frame = +3
Query: 81 LSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
+ S+ QQ QQ Q QHQQ Q + Q Q+ Q + Q
Sbjct: 14 IHSQKQQQQQQQQQQQQQQHQQQQQQQQQYQFQQQQMQQLMQQRLQ 59
>gi|126721|sp|P21519|MAM_DROME NEUROGENIC PROTEIN MASTERMIND
>gi|103241|pir||A33106 neurogenic locus mam protein - fruit fly
(Drosophila melanogaster) >gi|8204|emb|CAA38152.1| (X54251) nuclear
protein [Drosophila melanogaster]
Length = 1596
Frame 3 hits (HSPs): __
Annotated Domains: _______________________________________________ __
__________________________________________________
Database sequence: | | | | | 1596
0 500 1000 1500
__________________
Annotated Domains:
Entrez Domain: GLN-RICH. 20..84
Entrez Domain: ARG/LYS-RICH (BASIC). 127..190
Entrez Domain: GLN-RICH. 196..219
Entrez Domain: ASN-RICH. 259..304
Entrez Domain: GLY/ASN-RICH. 355..388
Entrez Domain: GLN-RICH. 392..406
Entrez Domain: GLY-RICH. 407..440
Entrez Domain: GLN-RICH. 651..671
Entrez Domain: GLN-RICH. 700..714
Entrez Domain: GLN-RICH. 759..816
Entrez Domain: 5 X 2 AA TANDEM REPEATS OF G-V. 987..996
Entrez Domain: ALA-RICH. 1060..1079
Entrez Domain: 8 X 2 AA TANDEM REPEATS OF V-G. 1092..1107
Entrez Domain: 7 X 2 AA TANDEM REPEATS OF G-V. 1237..1252
Entrez Domain: POLY-THR. 1492..1496
Entrez Domain: ASP/GLU-RICH (ACIDIC). 1559..1592
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 21..83
PRODOM PD028194: MAM(1) Q24754(1) 120..192
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 194..233
PRODOM PD026430: MAM_DROME 235..257
PRODOM PD026647: MAM(1) Q24754(1) 307..353
PRODOM PD032089: MAM(1) Q24754(1) 441..554
PRODOM PD080452: MAM_DROME 570..590
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 625..815
PRODOM PD051762: MAM_DROME 817..888
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 890..1061
PRODOM PD044896: MAM_DROME 1145..1166
PRODOM PD025980: MAM_DROME 1205..1231
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 1270..1501
PRODOM PD026618: MAM(1) Q24754(1) 1548..1591
__________________
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 0.42, P = 0.34
Identities = 24/60 (40%), Positives = 31/60 (51%), Frame = +3
Query: 60 ELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSH--SQEQTQTQSQCHNGK 233
+ GG + S +Q A++QQ Q Q QQH N H Q H Q+Q Q Q Q HN +
Sbjct: 2 DAGGLPVFQSA-SQAAAVAQQQQQQQQQQHLNLQLHQQHLGLHLQQQQQLQLQQQQHNAQ 60
Query: 234 A 236
A
Sbjct: 61 A 61
>gi|84942|pir||A34692 ecdysone-induced protein E74A - fruit fly (Drosophila
melanogaster) >gi|157308|gb|AAA28493.1| (M37082) E74A protein
[Drosophila melanogaster]
Length = 829
Frame 3 hits (HSPs): _____
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | | | 829
0 150 300 450 600 750
__________________
Annotated Domains:
Entrez domain: ets DNA-binding domain homology 735..815
PROSITE ETS_DOMAIN_1: Ets-domain signature 1. 735..743
PROSITE ETS_DOMAIN_2: Ets-domain signature 2. 781..796
__________________
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.42, P = 0.34
Identities = 30/72 (41%), Positives = 34/72 (47%), Frame = +3
Query: 15 APWXAEVRRLRRTVAELGGESLLSSRMAQQLAI-SQQVFQLQHQQ--HPNQLR-HVQLDN 182
AP A +R G SL + QQ + SQQ QL HQQ H Q H QL
Sbjct: 537 APTAATAAASQRGTTINGYHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQL-- 594
Query: 183 SHSQEQTQTQSQCH 224
SH Q+Q Q Q Q H
Sbjct: 595 SHQQQQQQQQQQQH 608
>gi|119090|sp|P20105|E74A_DROME ECDYSONE-INDUCED PROTEIN 74EFA (ETS-RELATED
PROTEIN E74A)
Length = 829
Frame 3 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 829
0 150 300 450 600 750
__________________
Annotated Domains:
BLOCKS BL00345A: Ets-domain proteins. 729..747
BLOCKS BL00345B: Ets-domain proteins. 764..814
DOMO DM04000: ETSDNA-BINDINGDOMAIN 1..726
DOMO DM00281: ETS-DOMAIN 728..827
Entrez dna-binding site: ETS-DOMAIN. 733..815
Entrez Domain: POLY-ASN. 126..129
Entrez Domain: POLY-SER. 187..190
Entrez Domain: POLY-ALA. 191..201
Entrez Domain: POLY-ASN. 208..219
Entrez Domain: POLY-GLY. 227..232
Entrez Domain: POLY-GLN. 318..324
Entrez Domain: POLY-GLN. 352..361
Entrez Domain: POLY-GLN. 380..383
Entrez Domain: POLY-SER. 432..435
Entrez Domain: POLY-ALA. 456..470
Entrez Domain: POLY-GLN. 560..576
Entrez Domain: POLY-GLN. 585..588
Entrez Domain: POLY-GLN. 597..607
Entrez Domain: POLY-ALA. 641..649
Entrez Domain: POLY-SER. 653..657
Entrez Domain: POLY-ALA. 658..663
Entrez Domain: POLY-ALA. 667..679
PFAM Ets: Ets-domain 733..814
PRINTS ETSDOMAIN1: ETS-domain motif I - 4 733..746
PRINTS ETSDOMAIN2: ETS-domain motif II - 4 759..777
PRINTS ETSDOMAIN3: ETS-domain motif III - 4 778..796
PRINTS ETSDOMAIN4: ETS-domain motif IV - 4 797..815
PRODOM PD098794: E74A_DROME 1..185
PRODOM PD195507: E74A_DROME 239..303
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 305..360
PRODOM PD033878: E74A(1) E74B(1) 362..422
PRODOM PD028758: E74A(1) E74B(1) 471..550
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 552..639
PRODOM PD154098: E74A(1) E74B(1) 680..732
PRODOM PD000803: FLI1(3) ETS1(3) ETS2(3) 734..813
PROSITE ETS_DOMAIN_1: Ets-domain signature 1. 735..743
PROSITE ETS_DOMAIN_2: Ets-domain signature 2. 781..796
__________________
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.42, P = 0.34
Identities = 30/72 (41%), Positives = 34/72 (47%), Frame = +3
Query: 15 APWXAEVRRLRRTVAELGGESLLSSRMAQQLAI-SQQVFQLQHQQ--HPNQLR-HVQLDN 182
AP A +R G SL + QQ + SQQ QL HQQ H Q H QL
Sbjct: 537 APTAATAAASQRGTTINGYHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQL-- 594
Query: 183 SHSQEQTQTQSQCH 224
SH Q+Q Q Q Q H
Sbjct: 595 SHQQQQQQQQQQQH 608
>gi|119091|sp|P11536|E74B_DROME ECDYSONE-INDUCED PROTEIN 74EFB (ETS-RELATED
PROTEIN E74B) >gi|85124|pir||S04722 puff 74E protein - fruit fly
(Drosophila melanogaster) >gi|7514|emb|CAA33195.1| (X15087) 74E
protein (AA 1-883) [Drosophila melanogaster]
Length = 883
Frame 3 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 883
0 150 300 450 600 750
__________________
Annotated Domains:
BLOCKS BL00345A: Ets-domain proteins. 783..801
BLOCKS BL00345B: Ets-domain proteins. 818..868
DOMO DM04000: ETSDNA-BINDINGDOMAIN 60..780
DOMO DM00281: ETS-DOMAIN 782..881
Entrez Domain: ASP/GLU-RICH (ACIDIC). 78..280
Entrez Domain: ALA/GLN/SER-RICH. 281..759
Entrez Domain: ARG/LYS-RICH (BASIC). 760..883
Entrez dna-binding site: ETS-DOMAIN. 787..869
Entrez Domain: POLY-SER. 27..51
Entrez Domain: POLY-ALA. 72..79
Entrez Domain: POLY-ALA. 289..299
Entrez Domain: POLY-GLN. 372..378
Entrez Domain: POLY-GLN. 406..415
Entrez Domain: POLY-GLN. 434..437
Entrez Domain: POLY-SER. 486..489
Entrez Domain: POLY-ALA. 510..524
Entrez Domain: POLY-GLN. 614..630
Entrez Domain: POLY-GLN. 639..642
Entrez Domain: POLY-GLN. 651..661
Entrez Domain: POLY-ALA. 695..703
Entrez Domain: POLY-SER. 707..711
Entrez Domain: POLY-ALA. 712..717
Entrez Domain: POLY-ALA. 721..733
PFAM Ets: Ets-domain 787..868
PRINTS ETSDOMAIN1: ETS-domain motif I - 4 787..800
PRINTS ETSDOMAIN2: ETS-domain motif II - 4 813..831
PRINTS ETSDOMAIN3: ETS-domain motif III - 4 832..850
PRINTS ETSDOMAIN4: ETS-domain motif IV - 4 851..869
PRODOM PD045437: E74B_DROME 1..25
PRODOM PD096671: E74B_DROME 84..247
PRODOM PD194900: E74B_DROME 300..357
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 359..414
PRODOM PD033878: E74A(1) E74B(1) 416..476
PRODOM PD028758: E74A(1) E74B(1) 525..604
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 606..693
PRODOM PD154098: E74A(1) E74B(1) 734..786
PRODOM PD000803: FLI1(3) ETS1(3) ETS2(3) 788..867
PROSITE ETS_DOMAIN_1: Ets-domain signature 1. 789..797
PROSITE ETS_DOMAIN_2: Ets-domain signature 2. 835..850
__________________
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.45, P = 0.36
Identities = 30/72 (41%), Positives = 34/72 (47%), Frame = +3
Query: 15 APWXAEVRRLRRTVAELGGESLLSSRMAQQLAI-SQQVFQLQHQQ--HPNQLR-HVQLDN 182
AP A +R G SL + QQ + SQQ QL HQQ H Q H QL
Sbjct: 591 APTAATAAASQRGTTINGYHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQL-- 648
Query: 183 SHSQEQTQTQSQCH 224
SH Q+Q Q Q Q H
Sbjct: 649 SHQQQQQQQQQQQH 662
>gi|84943|pir||B34692 ecdysone-induced protein E74B - fruit fly (Drosophila
melanogaster) >gi|157310|gb|AAA28494.1| (M37083) E74B protein
[Drosophila melanogaster] >gi|7293965|gb|AAF49324.1| (AE003523)
Eip74EF gene product [Drosophila melanogaster]
Length = 883
Frame 3 hits (HSPs): _____
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | | | 883
0 150 300 450 600 750
__________________
Annotated Domains:
Entrez domain: ets DNA-binding domain homology 789..869
PROSITE ETS_DOMAIN_1: Ets-domain signature 1. 789..797
PROSITE ETS_DOMAIN_2: Ets-domain signature 2. 835..850
__________________
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.45, P = 0.36
Identities = 30/72 (41%), Positives = 34/72 (47%), Frame = +3
Query: 15 APWXAEVRRLRRTVAELGGESLLSSRMAQQLAI-SQQVFQLQHQQ--HPNQLR-HVQLDN 182
AP A +R G SL + QQ + SQQ QL HQQ H Q H QL
Sbjct: 591 APTAATAAASQRGTTINGYHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQL-- 648
Query: 183 SHSQEQTQTQSQCH 224
SH Q+Q Q Q Q H
Sbjct: 649 SHQQQQQQQQQQQH 662
>gi|7299916|gb|AAF55090.1| (AE003706) CG7552 gene product [Drosophila
melanogaster]
Length = 88
Frame 3 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 88
0 20 40 60 80
Plus Strand HSPs:
Score = 67 (23.6 bits), Expect = 0.59, P = 0.45
Identities = 14/38 (36%), Positives = 16/38 (42%), Frame = +3
Query: 111 ISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCH 224
+ Q Q QH HP+ LR Q H Q Q Q H
Sbjct: 4 LQQTASQSQHHLHPHHLRPQQQQQQHHHHHQQQQQQQH 41
>gi|6680025 ref|NP_032158.1| glutamine repeat protein 1 [Mus musculus]
>gi|1245105|gb|AAC52934.1| (U46463) glutamine repeat protein-1 [Mus
musculus]
Length = 171
Frame 3 hits (HSPs): __________________ _________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 0.61, P = 0.46
Identities = 24/63 (38%), Positives = 27/63 (42%), Frame = +3
Query: 36 RRLRRTVAELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQS 215
RR RR + L G + QQ QQ Q QHQQH Q + Q H Q Q Q
Sbjct: 18 RRKRRAYSRLDG----AKEQHQQ---HQQHQQDQHQQHQQQQQQQQQQQQHQQHQQHQQH 70
Query: 216 QCH 224
Q H
Sbjct: 71 QQH 73
Score = 72 (25.3 bits), Expect = 5.0, P = 0.99
Identities = 15/30 (50%), Positives = 17/30 (56%), Frame = +3
Query: 135 QHQQHPNQLRHVQLDNSHSQEQTQTQSQCH 224
QHQQH Q +H Q H Q+Q Q Q Q H
Sbjct: 96 QHQQHQQQQQHQQ-HQQHQQQQQQQQHQQH 124
>gi|7293625|gb|AAF48997.1| (AE003512) CG14223 gene product [Drosophila
melanogaster]
Length = 581
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | 581
0 150 300 450
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 0.70, P = 0.51
Identities = 20/47 (42%), Positives = 22/47 (46%), Frame = +3
Query: 99 QQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQ----TQTQSQCHN 227
Q + S Q Q QHQ H Q +H N H Q Q Q QSQ HN
Sbjct: 198 QHILASHQQQQQQHQHHHQQQQHHNHHNHHHQHQQTNHAQAQSQTHN 244
>gi|4103802|gb|AAD01862.1| (AF027625) posF21 [Arabidopsis thaliana]
Length = 58
Frame 3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | 58
0 20 40
Plus Strand HSPs:
Score = 66 (23.2 bits), Expect = 0.76, P = 0.53
Identities = 17/47 (36%), Positives = 24/47 (51%), Frame = +3
Query: 72 ESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQ 212
+++L+++ QQL I Q Q Q QQ Q +H Q Q Q Q Q
Sbjct: 1 QTILAAKQFQQLQIHSQK-QQQQQQQQQQQQHQQQQQQQQQYQFQQQ 46
>gi|7296073|gb|AAF51368.1| (AE003586) CG18131 gene product [Drosophila
melanogaster]
Length = 440
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 440
0 150 300
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 0.95, P = 0.61
Identities = 24/64 (37%), Positives = 28/64 (43%), Frame = +3
Query: 39 RLRRTVAELGGESLL--SSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQ 212
R + T G S L S QQ I Q Q Q QQH Q H Q + H Q++ Q Q
Sbjct: 173 RRQATPEHEGAASNLPGSGFQQQQRQIPQHQQQHQQQQHHQQQHHQQQHHQHQQQKHQQQ 232
Query: 213 SQCH 224
Q H
Sbjct: 233 QQQH 236
>gi|4103798|gb|AAD01860.1| (AF027623) posF21 [Arabidopsis thaliana]
Length = 56
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | 56
0 20 40
Plus Strand HSPs:
Score = 65 (22.9 bits), Expect = 0.97, P = 0.62
Identities = 17/48 (35%), Positives = 26/48 (54%), Frame = +3
Query: 72 ESLLSSRMAQQLAI-SQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQ 212
+++L+++ QQL I SQ+ Q Q QQH Q + Q Q+Q Q
Sbjct: 1 QTILAAKQFQQLQIHSQKQQQQQQQQHQQQQQQQQQQQYQFQQQQMQQ 48
Score = 61 (21.5 bits), Expect = 2.6, P = 0.92
Identities = 17/49 (34%), Positives = 25/49 (51%), Frame = +3
Query: 72 ESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
+++L+++ QQL I Q Q Q QQ +H Q Q+Q Q Q Q
Sbjct: 1 QTILAAKQFQQLQIHSQKQQQQQQQ-----QHQQQQQQQQQQQYQFQQQ 44
Score = 56 (19.7 bits), Expect = 9.1, P = 1.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Frame = +3
Query: 72 ESLLSSRMAQQLAI----SQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
+++L+++ QQL I QQ Q QHQQ Q + Q Q Q Q +
Sbjct: 1 QTILAAKQFQQLQIHSQKQQQQQQQQHQQQQQQQQQQQYQFQQQQMQQLMQQR 53
>gi|4262101|gb|AAD14401.1|S82497_1 (S82497) spinocerebellar ataxia type 1 [Homo
sapiens]
Length = 57
Frame 3 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | 57
0 20 40
Plus Strand HSPs:
Score = 65 (22.9 bits), Expect = 0.97, P = 0.62
Identities = 17/40 (42%), Positives = 20/40 (50%), Frame = +3
Query: 99 QQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
QQ QQ Q QHQQ Q + Q + H Q+Q Q Q Q
Sbjct: 10 QQQQQQQQQQQHQHQQQQQQQQQQQ-QHQHQQQQQQQQQQ 48
>gi|7301353|gb|AAF56481.1| (AE003752) CG5079 gene product [Drosophila
melanogaster]
Length = 148
Frame 3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 148
0 50 100
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 1.0, P = 0.65
Identities = 20/48 (41%), Positives = 24/48 (50%), Frame = +3
Query: 87 SRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHNG 230
SR+ QQ + Q Q+Q QQH Q Q + QEQ Q Q Q H G
Sbjct: 55 SRLQQQQLLHQHQQQIQQQQHEQQ----QQEQQQQQEQQQQQQQ-HEG 97
>gi|2996042|gb|AAC08423.1| (AF054614) homeobox protein NK7.1 [Drosophila
melanogaster]
Length = 641
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 641
0 150 300 450 600
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 1.5, P = 0.78
Identities = 20/57 (35%), Positives = 26/57 (45%), Frame = +3
Query: 57 AELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHN 227
A L + S +A I + Q Q QQ QL H+Q + H Q+Q Q Q Q N
Sbjct: 9 AHLEAAEMASGALAHNYGIVKD--QQQQQQQQQQLHHLQQQHHHQQQQQQQQQQQSN 63
>gi|7299875|gb|AAF55051.1| (AE003704) NK7.1 gene product [Drosophila
melanogaster]
Length = 722
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 722
0 150 300 450 600
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 1.8, P = 0.83
Identities = 20/57 (35%), Positives = 26/57 (45%), Frame = +3
Query: 57 AELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHN 227
A L + S +A I + Q Q QQ QL H+Q + H Q+Q Q Q Q N
Sbjct: 9 AHLEAAEMASGALAHNYGIVKD--QQQQQQQQQQLHHLQQQHHHQQQQQQQQQQQSN 63
>gi|7297728|gb|AAF52979.1| (AE003629) CG17093 gene product [Drosophila
melanogaster]
Length = 731
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 731
0 150 300 450 600
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 1.8, P = 0.83
Identities = 22/67 (32%), Positives = 33/67 (49%), Frame = +3
Query: 27 AEVRRLRRTVAELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQ 206
AEV+ ++ + G SL S+ Q+ + + Q Q H Q++ S SQEQ Q
Sbjct: 594 AEVQEQLQSQTQASGTSLTQSQQQSQVQAVEALAQSLTQAHA-QIQEQAQSQSQSQEQDQ 652
Query: 207 TQSQCHN 227
+QSQ N
Sbjct: 653 SQSQAPN 659
>gi|7294269|gb|AAF49620.1| (AE003530) CG13452 gene product [Drosophila
melanogaster]
Length = 82
Frame 3 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | | | 82
0 20 40 60 80
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 2.0, P = 0.87
Identities = 14/35 (40%), Positives = 17/35 (48%), Frame = +3
Query: 117 QQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQC 221
QQ+ Q Q Q P QL+ Q Q Q QS+C
Sbjct: 38 QQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQSKC 72
Score = 60 (21.1 bits), Expect = 3.3, P = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%), Frame = +3
Query: 66 GGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQ-LDNSHSQEQTQTQSQ 218
GG+ ++ QQ QQ Q Q QQ P QL+ Q L +Q Q Q Q
Sbjct: 13 GGQDSAAAPQPQQ----QQKQQQQRQQQPQQLQQPQQLQQPQQLQQPQQQQQ 60
>gi|4103792|gb|AAD01857.1| (AF027620) posF21 [Arabidopsis thaliana]
>gi|4103800|gb|AAD01861.1| (AF027624) posF21 [Arabidopsis thaliana]
Length = 57
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | 57
0 20 40
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 2.0, P = 0.87
Identities = 17/47 (36%), Positives = 23/47 (48%), Frame = +3
Query: 72 ESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQ 212
+++L+++ QQL I Q Q Q QQ Q H Q Q Q Q Q
Sbjct: 1 QTILAAKQFQQLQIHSQKQQQQQQQQQQQ--HQQQQQQQQQYQFQQQ 45
Score = 56 (19.7 bits), Expect = 9.1, P = 1.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Frame = +3
Query: 72 ESLLSSRMAQQLAI-------SQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
+++L+++ QQL I QQ Q QHQQ Q + Q Q+ Q + Q
Sbjct: 1 QTILAAKQFQQLQIHSQKQQQQQQQQQQQHQQQQQQQQQYQFQQQQMQQLMQQRLQ 56
>gi|7295103|gb|AAF50429.1| (AE003555) ImpE1 gene product [Drosophila
melanogaster]
Length = 1468
Frame 3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | 1468
0 500 1000
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 2.0, P = 0.87
Identities = 22/65 (33%), Positives = 34/65 (52%), Frame = +3
Query: 30 EVRRLRRTVAEL-GGESLLSSRMA-QQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQT 203
E +LR V E+ GE L + +A ++ ++QQ QL QQH + + Q + H EQ
Sbjct: 126 ETTKLRPEVVEVDNGEKLEAVDLAHEETELTQQQNQLDEQQHQEEEQKHQEEEQHRIEQQ 185
Query: 204 QTQSQ 218
Q Q +
Sbjct: 186 QNQEE 190
>gi|6746588|gb|AAF27637.1|AF217281_1 (AF217281) ecdysone-inducible gene E1
[Drosophila melanogaster]
Length = 1616
Frame 3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 1616
0 500 1000 1500
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 2.2, P = 0.89
Identities = 22/65 (33%), Positives = 34/65 (52%), Frame = +3
Query: 30 EVRRLRRTVAEL-GGESLLSSRMA-QQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQT 203
E +LR V E+ GE L + +A ++ ++QQ QL QQH + + Q + H EQ
Sbjct: 274 ETTKLRPEVVEVDNGEKLEAVDLAHEETELTQQQNQLDEQQHQEEEQKHQEEEQHRIEQQ 333
Query: 204 QTQSQ 218
Q Q +
Sbjct: 334 QNQEE 338
>gi|2088611|gb|AAB88603.1| (U95799) ERK/MAP protein kinase [Candida
dubliniensis]
Length = 62
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 62
0 20 40 60
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 2.6, P = 0.92
Identities = 14/38 (36%), Positives = 16/38 (42%), Frame = +3
Query: 129 QLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHNGKATA 242
Q QH QH L+ Q +Q Q Q Q Q TA
Sbjct: 11 QQQHHQHQQMLQQQQQAQQQAQAQVQAQQQAAAATTTA 48
Score = 57 (20.1 bits), Expect = 6.8, P = 1.0
Identities = 15/40 (37%), Positives = 18/40 (45%), Frame = +3
Query: 120 QVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHNGKAT 239
Q QLQ Q H +Q Q + Q Q Q Q+Q AT
Sbjct: 6 QHHQLQQQHHQHQQMLQQQQQAQQQAQAQVQAQQQAAAAT 45
>gi|10728524|gb|AAF46312.2| (AE003442) fs(1)h gene product [Drosophila
melanogaster]
Length = 1937
Frame 3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 1937
0 500 1000 1500
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 2.7, P = 0.93
Identities = 23/61 (37%), Positives = 29/61 (47%), Frame = +3
Query: 42 LRRTVAE-LGGESLLSSRMAQQLAISQQVFQLQHQQ-HPNQLRHVQLDNSHSQEQTQTQS 215
L T A L E L + QQ+ + QQ Q Q QQ H Q +H Q + Q+Q TQ
Sbjct: 1382 LNMTAASFLDLEPSLQQQQMQQMQLQQQHHQQQQQQTHQQQQQHQQQHHQQQQQQQLTQQ 1441
Query: 216 Q 218
Q
Sbjct: 1442 Q 1442
>gi|9665128|gb|AAF97312.1|AC007843_15 (AC007843) Unknown protein [Arabidopsis
thaliana]
Length = 674
Frame 3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 674
0 150 300 450 600
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 3.5, P = 0.97
Identities = 21/50 (42%), Positives = 29/50 (58%), Frame = +3
Query: 81 LSSRMAQQLAIS---QQVFQL-QHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
LSS Q ++S QQ+ Q+ Q QQ +QL Q++ SHSQ+Q Q Q
Sbjct: 407 LSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQ 456
>gi|8778478|gb|AAF79486.1|AC022492_30 (AC022492) F1L3.13 [Arabidopsis thaliana]
Length = 734
Frame 3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 734
0 150 300 450 600
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 3.8, P = 0.98
Identities = 21/50 (42%), Positives = 29/50 (58%), Frame = +3
Query: 81 LSSRMAQQLAIS---QQVFQL-QHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
LSS Q ++S QQ+ Q+ Q QQ +QL Q++ SHSQ+Q Q Q
Sbjct: 404 LSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQ 453
>gi|1079053|pir||S47857 basic protein, cytosolic - fruit fly (Drosophila
melanogaster) >gi|495219|gb|AAA18501.1| (U09789) cytoplasmic basic
protein [Drosophila melanogaster]
Length = 737
Frame 3 hits (HSPs): ____
Annotated Domains: _____ ___
__________________________________________________
Database sequence: | | | | | | 737
0 150 300 450 600
__________________
Annotated Domains:
DOMO DM00063: ZINCFINGER,C3HC4TYPE, 540..603
DOMO DM00829: NEUROHYPOPHYSIALHORMONES 644..673
PROSITE MIP: MIP family signature. 558..566
__________________
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 3.8, P = 0.98
Identities = 17/38 (44%), Positives = 19/38 (50%), Frame = +3
Query: 111 ISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCH 224
+ QQ QLQHQQ Q H Q Q+Q Q Q Q H
Sbjct: 260 VQQQQHQLQHQQQQQQQHHHQHQQQQHQQQQQHQMQHH 297
>gi|7303732|gb|AAF58781.1| (AE003829) CG18381 gene product [Drosophila
melanogaster]
Length = 531
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 531
0 150 300 450
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 4.0, P = 0.98
Identities = 22/52 (42%), Positives = 25/52 (48%), Frame = +3
Query: 75 SLLSSRMAQQLAISQQVFQLQHQQ---HPNQLRHVQLDNSHSQEQTQTQSQCH 224
SLL A + I +Q Q QHQQ HP Q +H H Q T QSQ H
Sbjct: 82 SLLHKPQATTIQIVKQQHQQQHQQQHQHPQQ-QHQPQQQQHRQHLTIQQSQTH 133
>gi|10726612|gb|AAF55629.2| (AE003724) CG6026 gene product [Drosophila
melanogaster]
Length = 1542
Frame 3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 1542
0 500 1000 1500
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 4.1, P = 0.98
Identities = 19/46 (41%), Positives = 22/46 (47%), Frame = +3
Query: 81 LSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
L + QQ QQ Q QHQQ Q +H Q H Q+Q Q Q Q
Sbjct: 432 LEKQQQQQQQQQQQHHQQQHQQQHQQQQHQQHQQQHIQQQHQHQQQ 477
>gi|7292314|gb|AAF47721.1| (AE003477) BtbVII gene product [Drosophila
melanogaster]
Length = 828
Frame 3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 828
0 150 300 450 600 750
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 4.4, P = 0.99
Identities = 22/55 (40%), Positives = 26/55 (47%), Frame = +3
Query: 69 GESLLSSRMAQQLAISQQ--VFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHN 227
G+SL SS AQQ QQ Q QQH + + QL Q Q Q Q Q H+
Sbjct: 164 GDSLWSSSEAQQFQQQQQQQAQQQAQQQHHHHQQQQQLQQQQQQAQQQQQQQQHH 218
>gi|7512059|pir||T13998 gene mastermind protein - fruit fly (Drosophila
virilis) >gi|157834|gb|AAC37201.1| (M92914) mastermind [Drosophila
virilis]
Length = 1655
Frame 3 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | 1655
0 500 1000 1500
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 4.4, P = 0.99
Identities = 20/43 (46%), Positives = 23/43 (53%), Frame = +3
Query: 99 QQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQCHN 227
QQ QQ Q QHQQH Q +H Q H Q+Q Q Q Q H+
Sbjct: 374 QQQQHQQQQHQ-QHQQHQQQQQHQQ--QQHQQQQHQQQQQQHH 413
>gi|484951|pir||PN0479 cell division cycle-2-related protein kinase (EC
2.7.1.-) ERK1 - mouse (fragment)
Length = 51
Frame 2 hits (HSPs): ___________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 51
0 20 40
__________________
Annotated Domains:
Entrez domain: protein kinase homology (fragmen 1..51
__________________
Plus Strand HSPs:
Score = 58 (20.4 bits), Expect = 5.3, P = 1.0
Identities = 15/27 (55%), Positives = 17/27 (62%), Frame = +2
Query: 242 LLISTLIPCMLNVCDMNLNRIL---HDQT 319
LLI+T PC L +CD L RI HD T
Sbjct: 9 LLINT--PCDLKICDFGLARIADPEHDHT 35
>gi|547569|emb|CAA45889.1| (X64605) protein kinase [Mus musculus]
Length = 39
Frame 2 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | 39
0 20
Plus Strand HSPs:
Score = 58 (20.4 bits), Expect = 5.3, P = 1.0
Identities = 15/27 (55%), Positives = 17/27 (62%), Frame = +2
Query: 242 LLISTLIPCMLNVCDMNLNRIL---HDQT 319
LLI+T PC L +CD L RI HD T
Sbjct: 3 LLINT--PCDLKICDFGLARIADPEHDHT 29
>gi|7291062|gb|AAF46499.1| (AE003447) CG15315 gene product [Drosophila
melanogaster]
Length = 89
Frame 3 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | | 89
0 20 40 60 80
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 6.3, P = 1.0
Identities = 18/55 (32%), Positives = 24/55 (43%), Frame = +3
Query: 54 VAELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
V+ G E ++ QQ QQ Q H + QL+ QL Q+Q Q Q Q
Sbjct: 24 VSPSGKEKEAATSQQQQEQQQQQQQQQHHNRQQQQLQLQQLQLQQQQQQLQQQQQ 78
>gi|7295282|gb|AAF50603.1| (AE003560) CG17742 gene product [Drosophila
melanogaster]
Length = 152
Frame 3 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | || 152
0 50 100 150
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 7.8, P = 1.0
Identities = 21/53 (39%), Positives = 25/53 (47%), Frame = +3
Query: 60 ELGGESLLSSRMAQQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
+LG S L SR + + QQ Q Q QQ Q H Q H Q+Q Q Q Q
Sbjct: 55 KLGQRSSLWSRPSSTTSQLQQEHQQQQQQ---QKHHQQQQQQHHQQQQQQQQQ 104
>gi|4502683 ref|NP_001773.1| CD72 antigen [Homo sapiens] >gi|11428017
ref|XP_005388.1| CD72 antigen [Homo sapiens]
>gi|116029|sp|P21854|CD72_HUMAN B-CELL DIFFERENTIATION ANTIGEN CD72
(LYB-2) >gi|105399|pir||A43532 B-cell surface antigen CD72 - human
>gi|187263|gb|AAA36189.1| (M54992) B cell differentiation antigen
[Homo sapiens]
Length = 359
Frame 3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 359
0 150 300
Plus Strand HSPs:
Score = 74 (26.0 bits), Expect = 8.3, P = 1.0
Identities = 22/64 (34%), Positives = 36/64 (56%), Frame = +3
Query: 36 RRLRRTVAELG--GESLLSSRMAQQLAISQQVFQLQ---HQQHPNQLRHVQLDNSHSQEQ 200
++LR + +LG E L SR ++LA SQ+ Q++ HQ QL+ Q D ++E
Sbjct: 141 QQLRLKITQLGQSAEDLQGSR--RELAQSQEALQVEQRAHQAAEGQLQACQADRQKTKET 198
Query: 201 TQTQSQ 218
Q++ Q
Sbjct: 199 LQSEEQ 204
>gi|7302805|gb|AAF57880.1| (AE003803) CG14477 gene product [Drosophila
melanogaster]
Length = 276
Frame 3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | 276
0 50 100 150 200 250
Plus Strand HSPs:
Score = 73 (25.7 bits), Expect = 8.7, P = 1.0
Identities = 17/47 (36%), Positives = 26/47 (55%), Frame = +3
Query: 87 SRMAQQLAISQQVFQLQHQQHPNQLRHVQ-LDNS-HSQEQTQTQSQC 221
S ++Q A + ++Q Q QQH Q +H Q L + H+Q+QT C
Sbjct: 78 SNASKQAAHASNMYQQQQQQHQQQQQHQQHLQHQQHAQQQTHITYHC 124
>gi|12321581|gb|AAG50844.1|AC073944_11 (AC073944) hypothetical protein
[Arabidopsis thaliana]
Length = 234
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 234
0 50 100 150 200
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 9.3, P = 1.0
Identities = 17/40 (42%), Positives = 20/40 (50%), Frame = +3
Query: 99 QQLAISQQVFQLQHQQHPNQLRHVQLDNSHSQEQTQTQSQ 218
QQL + QQ Q Q QQ Q H+Q Q+Q Q Q Q
Sbjct: 31 QQLFLQQQQLQQQQQQQQQQQFHLQQQQQTQQQQQQFQPQ 70
>gi|1304060|dbj|BAA07853.1| (D43795) CP-1 [Drosophila melanogaster]
Length = 519
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | 519
0 150 300 450
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 9.5, P = 1.0
Identities = 24/74 (32%), Positives = 37/74 (50%), Frame = +3
Query: 36 RRLRRTVAELGGESLLSSRMAQQLAISQQVFQL--QHQQHPNQLRHVQLDNSHS---QEQ 200
+R ++ +L + S+M+QQ QQ L QHQQ Q + Q +S+ Q Q
Sbjct: 189 QRYQQQQQQLRQQHQQMSQMSQQAHYPQQQSSLVRQHQQQQQQQQQQQRASSNQSQRQSQ 248
Query: 201 TQTQSQCHNGKATA 242
+Q+QSQ H + A
Sbjct: 249 SQSQSQSHAANSAA 262
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.342 0.141 0.445
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.341 0.143 0.525
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.148 0.498
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.360 0.158 0.541
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.350 0.146 0.636
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.354 0.159 0.566
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 113 111 10. 70 3 12 22 0.12 32
29 0.12 34
+2 0 113 112 10. 70 3 12 22 0.12 32
29 0.096 35
+1 0 113 112 10. 70 3 12 22 0.12 32
29 0.096 35
-1 0 113 111 10. 70 3 12 22 0.12 32
29 0.12 34
-2 0 113 111 10. 70 3 12 22 0.12 32
29 0.12 34
-3 0 113 112 10. 70 3 12 22 0.12 32
29 0.096 35
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 47
No. of states in DFA: 588 (58 KB)
Total size of DFA: 162 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 111.77u 1.00s 112.77t Elapsed: 00:00:36
Total cpu time: 111.82u 1.03s 112.85t Elapsed: 00:00:36
Start: Fri Jan 18 12:19:30 2002 End: Fri Jan 18 12:20:06 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000