R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|9759413|dbj|BAB09868.1| (AB008268) beta-ureidopropionase [Arabidopsis
thaliana]
Length = 405
Frame 3 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 405
0 150 300
Plus Strand HSPs:
Score = 589 (207.3 bits), Expect = 2.9e-56, P = 2.9e-56
Identities = 110/158 (69%), Positives = 130/158 (82%), Frame = +3
Query: 45 QNGEEKEETTASFCGYDSLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSL 224
+NGE E S CGYDSLH+LL NL P +QEV+RLL G NCG++LE + LPESA +L
Sbjct: 4 ENGETSAE--GSICGYDSLHQLLSANLKPELYQEVNRLLLGRNCGRSLEQIVLPESAKAL 61
Query: 225 SAEHGFDIQAFSFCADKELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEA 404
S++H FD+QA SF ADKE +R PR+VRVGLIQNSI LPTTA F+DQ + IF+KLKPII+A
Sbjct: 62 SSKHDFDLQAASFSADKEQMRNPRVVRVGLIQNSIALPTTAPFSDQTRGIFDKLKPIIDA 121
Query: 405 AGSSGVNVLCLQEAWMMPFAFCTREKRWCEFAEPVDGE 518
AG +GVN+LCLQEAW MPFAFCTRE+RWCEFAEPVDGE
Sbjct: 122 AGVAGVNILCLQEAWTMPFAFCTRERRWCEFAEPVDGE 159
Score = 561 (197.5 bits), Expect = 2.7e-53, P = 2.7e-53
Identities = 109/165 (66%), Positives = 129/165 (78%), Frame = +3
Query: 45 QNGEEKEETTASFCGYDSLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSL 224
+NGE E S CGYDSLH+LL NL P +QEV+RLL G NCG++LE + LPESA +L
Sbjct: 4 ENGETSAE--GSICGYDSLHQLLSANLKPELYQEVNRLLLGRNCGRSLEQIVLPESAKAL 61
Query: 225 SAEHGFDIQAFSFCADKELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEA 404
S++H FD+QA SF ADKE +R PR+VRVGLIQNSI LPTTA F+DQ + IF+KLKPII+A
Sbjct: 62 SSKHDFDLQAASFSADKEQMRNPRVVRVGLIQNSIALPTTAPFSDQTRGIFDKLKPIIDA 121
Query: 405 AGSSGVNVLCLQEAWMMPFAFCTREKRWCEFAEPVDGEFAEPVDG 539
AG +GVN+LCLQEAW MPFAFCTRE+RWCEFAEPVDG
Sbjct: 122 AGVAGVNILCLQEAWTMPFAFCTRERRWCEFAEPVDG-------- 158
>gi|7298937|gb|AAF54141.1| (AE003676) CG3027 gene product [Drosophila
melanogaster]
Length = 406
Frame 3 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | 406
0 150 300
Plus Strand HSPs:
Score = 344 (121.1 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 70/139 (50%), Positives = 97/139 (69%), Frame = +3
Query: 96 SLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSLSAEHGFDIQAFSFCADK 275
+L+ L+ +L P +EV R+L G+ + LE LP SA ++ ++GFDI+ + F A +
Sbjct: 8 NLNDCLEKHLPPDELKEVKRILYGVEEDQTLE---LPTSAKDIAEQNGFDIKGYRFTARE 64
Query: 276 ELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEAAGSSGVNVLCLQEAWMM 455
E R+ RIVRVG IQNSIV+PTTA Q++AI+ K+K +I+AA +G N++C QEAW M
Sbjct: 65 EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 124
Query: 456 PFAFCTREK-RWCEFAEPVD 512
PFAFCTREK WCEFAE +
Sbjct: 125 PFAFCTREKFPWCEFAEEAE 144
>gi|3108075|gb|AAC15764.1| (AF060797) putative beta-ureidopropionase [Manduca
sexta]
Length = 185
Frame 3 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | 185
0 50 100 150
Plus Strand HSPs:
Score = 324 (114.1 bits), Expect = 3.5e-28, P = 3.5e-28
Identities = 67/139 (48%), Positives = 93/139 (66%), Frame = +3
Query: 96 SLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSLSAEHGFDIQAFSFCADK 275
SL ++++NL+ E +R+ G LE V L +S+ + + E F++ A++F A K
Sbjct: 6 SLEAIIENNLSGRDLDEFNRIYYGRK--NHLE-VKLKDSSLAAAKEADFEVAAYAFPAKK 62
Query: 276 ELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEAAGSSGVNVLCLQEAWMM 455
E R PRIV+VG+IQ+SI PT +QKKAIF+K+K II+ AG GVN++C QE W M
Sbjct: 63 EQTRPPRIVKVGVIQHSIGAPTDRPVNEQKKAIFDKVKKIIDVAGQEGVNIICFQELWNM 122
Query: 456 PFAFCTREKR-WCEFAEPVD 512
PFAFCTREK+ WCEFAE +
Sbjct: 123 PFAFCTREKQPWCEFAESAE 142
>gi|11417872 ref|XP_009883.1| beta-ureidopropionase [Homo sapiens]
Length = 404
Frame 3 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 404
0 150 300
Plus Strand HSPs:
Score = 310 (109.1 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 70/152 (46%), Positives = 91/152 (59%), Frame = +3
Query: 60 KEETTASFCG--YDSLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSLSAE 233
K T + G + SL L+ +L QEV R+L G K L + LP A ++
Sbjct: 14 KHWRTVAMAGAEWKSLEECLEKHLPLPDLQEVKRVLYG----KELRKLDLPREAFEAASR 69
Query: 234 HGFDIQAFSFCADKELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEAAGS 413
F++Q ++F A +E LR PRIV VGL+QN I LP A A+Q A+ ++K I+E A
Sbjct: 70 EDFELQGYAFEAAEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAM 129
Query: 414 SGVNVLCLQEAWMMPFAFCTREKR-WCEFAEPV-DG 515
GVN++C QEAW MPFAFCTREK W EFAE DG
Sbjct: 130 CGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDG 165
>gi|7706509 ref|NP_057411.1| beta-ureidopropionase [Homo sapiens]
>gi|6288771|gb|AAF06735.1|AF163312_1 (AF163312)
beta-ureidopropionase [Homo sapiens] >gi|6635205|dbj|BAA88634.1|
(AB013885) beta-ureidopropionase [Homo sapiens]
Length = 384
Frame 3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 384
0 150 300
Plus Strand HSPs:
Score = 308 (108.4 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 67/142 (47%), Positives = 87/142 (61%), Frame = +3
Query: 90 YDSLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSLSAEHGFDIQAFSFCA 269
+ SL L+ +L QEV R+L G K L + LP A ++ F++Q ++F A
Sbjct: 6 WKSLEECLEKHLPLPDLQEVKRVLYG----KELRKLDLPREAFEAASREDFELQGYAFEA 61
Query: 270 DKELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEAAGSSGVNVLCLQEAW 449
+E LR PRIV VGL+QN I LP A A+Q A+ ++K I+E A GVN++C QEAW
Sbjct: 62 AEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAW 121
Query: 450 MMPFAFCTREKR-WCEFAEPV-DG 515
MPFAFCTREK W EFAE DG
Sbjct: 122 TMPFAFCTREKLPWTEFAESAEDG 145
>gi|6288790|gb|AAF06739.1| (AF169560) beta-ureidopropionase [Homo sapiens]
Length = 387
Frame 3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 387
0 150 300
Plus Strand HSPs:
Score = 308 (108.4 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 67/142 (47%), Positives = 87/142 (61%), Frame = +3
Query: 90 YDSLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSLSAEHGFDIQAFSFCA 269
+ SL L+ +L QEV R+L G K L + LP A ++ F++Q ++F A
Sbjct: 6 WKSLEECLEKHLPLPDLQEVKRVLYG----KELRKLDLPREAFEAASREDFELQGYAFEA 61
Query: 270 DKELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEAAGSSGVNVLCLQEAW 449
+E LR PRIV VGL+QN I LP A A+Q A+ ++K I+E A GVN++C QEAW
Sbjct: 62 AEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAW 121
Query: 450 MMPFAFCTREKR-WCEFAEPV-DG 515
MPFAFCTREK W EFAE DG
Sbjct: 122 TMPFAFCTREKLPWTEFAESAEDG 145
>gi|416730|sp|Q03248|BUP_RAT BETA-UREIDOPROPIONASE (BETA-ALANINE SYNTHASE)
(N-CARBAMOYL-BETA-ALANINE AMIDOHYDROLASE) >gi|285064|pir||S27881
beta-alanine synthase - rat >gi|203106|gb|AAA40804.1| (M97662)
beta-alanine synthase [Rattus norvegicus]
Length = 393
Frame 3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 393
0 150 300
Plus Strand HSPs:
Score = 305 (107.4 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 65/142 (45%), Positives = 90/142 (63%), Frame = +3
Query: 90 YDSLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSLSAEHGFDIQAFSFCA 269
+ SL + L+ +L P +V R+L G K + LP A ++E F+++ ++F A
Sbjct: 6 WQSLEQCLEKHLPPDDLSQVKRILYG----KQTRNLDLPRKALEAASERNFELKGYAFGA 61
Query: 270 DKELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEAAGSSGVNVLCLQEAW 449
KE R P+IVRVGL+QN I LPT+A A+Q A+ ++++ I E A GVN++C QEAW
Sbjct: 62 AKEQQRCPQIVRVGLVQNRIPLPTSAPVAEQVSALHKRIEEIAEVAAMCGVNIICFQEAW 121
Query: 450 MMPFAFCTREKR-WCEFAEPV-DG 515
MPFAFCTREK W EFAE DG
Sbjct: 122 NMPFAFCTREKLPWTEFAESAEDG 145
>gi|7499051|pir||T16068 hypothetical protein F13H8.7 - Caenorhabditis elegans
>gi|722377|gb|AAC46683.1| (U23139) highly similar to
beta-ureidopropionase (SP:BUP_RAT) [Caenorhabditis elegans]
Length = 387
Frame 3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 387
0 150 300
Plus Strand HSPs:
Score = 265 (93.3 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 62/140 (44%), Positives = 83/140 (59%), Frame = +3
Query: 90 YDSLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSLSAEHGFDIQAFSFCA 269
+D + L + L+ EV R+L G +ALE S+ E L+ + F + + A
Sbjct: 8 FDGVETALAEKLDGVSLDEVERILYGRPY-RALEISSIAEK---LAQDGDFQLSGYIVDA 63
Query: 270 DKELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEAAGSSGVNVLCLQEAW 449
KE R PR+VRV IQN I PTT +Q+ AI +++ +IEAA S+G NV+ LQEAW
Sbjct: 64 QKEQTRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAW 123
Query: 450 MMPFAFCTREKR-WCEFAEPV 509
MPFAFCTRE+ W EFAE V
Sbjct: 124 TMPFAFCTRERLPWTEFAESV 144
>gi|7304000|gb|AAF59043.1| (AE003835) CG13755 gene product [Drosophila
melanogaster]
Length = 60
Frame -1 hits (HSPs): ________________ _____________________
__________________________________________________
Database sequence: | | | | 60
0 20 40
Minus Strand HSPs:
Score = 44 (15.5 bits), Expect = 0.44, Sum P(2) = 0.36
Identities = 10/16 (62%), Positives = 10/16 (62%), Frame = -1
Query: 537 HQQVQQIPHQQVQQIH 490
HQQ QQ QQ QQ H
Sbjct: 13 HQQHQQQQQQQQQQQH 28
Score = 44 (15.5 bits), Expect = 0.44, Sum P(2) = 0.36
Identities = 10/25 (40%), Positives = 14/25 (56%), Frame = -1
Query: 270 QHKRKRPGCQNH-VPQRGKLQILGE 199
QH KR C+ H + L++LGE
Sbjct: 33 QHATKRRRCRQHWIKHLQLLRLLGE 57
Score = 40 (14.1 bits), Expect = 1.1, Sum P(2) = 0.67
Identities = 10/14 (71%), Positives = 10/14 (71%), Frame = -1
Query: 537 HQQVQQIPHQQVQQ 496
HQQ QQ HQQ QQ
Sbjct: 10 HQQHQQ--HQQQQQ 21
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.325 0.139 0.432
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.361 0.160 0.684
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.347 0.155 0.482
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.344 0.151 0.496
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.339 0.147 0.498
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.331 0.136 0.425
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 179 178 10. 76 3 12 22 0.11 34
31 0.11 37
+2 0 179 178 10. 76 3 12 22 0.11 34
31 0.11 37
+1 0 180 179 10. 76 3 12 22 0.11 34
31 0.12 37
-1 0 180 179 10. 76 3 12 22 0.11 34
31 0.12 37
-2 0 179 179 10. 76 3 12 22 0.11 34
31 0.12 37
-3 0 179 178 10. 76 3 12 22 0.11 34
31 0.11 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 9
No. of states in DFA: 592 (58 KB)
Total size of DFA: 204 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 184.01u 0.93s 184.94t Elapsed: 00:00:38
Total cpu time: 184.05u 0.95s 185.00t Elapsed: 00:00:38
Start: Wed Feb 6 15:43:52 2002 End: Wed Feb 6 15:44:30 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000