Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss8279475	SC_SNP|NT_025965.9_279007		fwd/B	C/T	gctccctctggctccaccattaatccctca	cctcgctttcttctctacccagcagccaga	04/17/03	10/25/06	114	Genomic			unknown
ss66814184	ILLUMINA|HumanHap300v1.1_rs5987128		fwd/T	C/T	gctccctctggctccaccattaatccctca	cctcgctttcttctctacccagcagccaga	11/09/06	11/09/06	127	Genomic			unknown
ss69268764	PERLEGEN|PGP13247260		fwd/B	C/T	gctccctctggctccaccattaatccctca	cctcgctttcttctctacccagcagccaga	01/30/07	03/31/08	127	Genomic			unknown
ss70852898	ILLUMINA|HumanHap550v3.0__rs5987128		fwd/B	C/T	gctccctctggctccaccattaatccctca	cctcgctttcttctctacccagcagccaga	04/20/07	03/31/08	130	Genomic			unknown
ss71438603	ILLUMINA|HumanHap650Yv3.0_rs5987128		fwd/B	C/T	gctccctctggctccaccattaatccctca	cctcgctttcttctctacccagcagccaga	04/23/07	04/23/07	127	Genomic			unknown
ss75815874	ILLUMINA|ILMN_Human_1M_rs5987128		fwd/B	C/T	gctccctctggctccaccattaatccctca	cctcgctttcttctctacccagcagccaga	08/28/07	08/29/07	129	Genomic			unknown
ss76896392	SI_EXO|NT_011726.13_3760202		fwd/B	C/T	gctccctctggctccaccattaatccctca	cctcgctttcttctctacccagcagccaga	09/20/07	09/20/07	129	Genomic			unknown
ss79213469	ILLUMINA|HumanHap300v2.0_rs5987128		fwd/B	C/T	gctccctctggctccaccattaatccctca	cctcgctttcttctctacccagcagccaga	04/18/07	11/18/07	130	Genomic			unknown

Fasta sequence   (Legend)

 CCCGCCAGCC GCCCAAGCAC GCAGTGGCCC AGCGCGGCCG CGGCGCCGCA GGGCACCTTG
 TAAGGCAATC GCCGGGATCC GGCTCGGGTG CCGGCCGCCA CCGCCCAGCC CACTGCTCGC
 TCGCGCCGCC TCCCGGAGCT GCGGCCCGGC TGGGCCGGCC CCAGGGCCTT TGCACCACCG
 GTGGCTGTCT CCCGGAGAGC TCTTCGGCCA CAGGTCGGCA AGGCTCTCTG CCTTCCAGTC
 TCTGCCTTCA CCGCCTCTCC GAGGACAGGC TGACCCGGCC ACTTGCCCGA AAGCAGCCTC
 CATGCCTAGC TCCAGGACCC TGCAACCCTG CACCACAGCT CTGCCACCCT GGGCTCCCGG
 CActcactgg gctccctctg gctccaccat taatccctca
 Y
 cctcgctttc ttctctaccc agcagccaga gcattccttt tattgagatc atgtcaccct
 cctgcagctc tctatgtcaa tccaagtcaa agcatgagtc cttagggggc ggcctaacga
 ctgccctggc ccctcctcct ccacctcttc cccggccaca ctggcctcct GACGGCCCTA
 GCCTTTGCTC CCCTGCCTGG AATGTTCTTC GATCAGATAT CTGCCTGGCT TGGCTCCTCG
 TTCCATCAGA TCTCGGCTCA AATGTCCCCT CCTCAAACCG GCCTCCCCCG CCCTGCCCCT
 GCCAATTCTC TCCGCATAAC CCTGCCCTGT CTTTAGAACG TCCAACCGCA AAAATCACCT
 TCTTCGCCTG GTCTTCCTCA CCAAAGCGTC CGCTCCCAGA

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_011726->NM_001039582 function
HuRef	NW_001842419->NM_001039582 function
Celera	NW_927732->NM_001039582 function

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	C/C	C/T	T/T	HWP	C	T
ss69268764	HapMap-CEU	European	67	IG	0.108	0.459	0.243	0.317	0.388	0.612
	HapMap-HCB	Asian	52	IG	0.034	0.552	0.207	0.025	0.365	0.635
	HapMap-JPT	Asian	50	IG	0.143	0.464	0.179	0.273	0.420	0.580
	HapMap-YRI	Sub-Saharan African	66	IG	0.083	0.583	0.167	0.020	0.409	0.591
ss8279475	HapMap-CEU	European	120	IG	0.783	0.150	0.067	0.584	0.858	0.142
	HapMap-HCB	Asian	90	IG	0.844	0.111	0.044	0.020	0.900	0.100
	HapMap-JPT	Asian	88	IG	0.841	0.068	0.091	0.527	0.875	0.125
	HapMap-YRI	Sub-Saharan African	120	IG	0.783	0.150	0.067	0.584	0.858	0.142

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
	UNKNOWN	UNKNOWN	UNKNOWN