BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= SPy_1460 hypothetical protein
(471 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_269542.1| hypothetical protein SPy_1460 [Streptococc... 986 0.0
ref|YP_282552.1| phage terminase [Streptococcus pyogenes MG... 984 0.0
ref|YP_060535.1| Phage terminase [Streptococcus pyogenes MG... 983 0.0
ref|NP_664919.1| putative terminase - phage associated [Str... 983 0.0
ref|NP_607550.1| hypothetical protein spyM18_1474 [Streptoc... 983 0.0
ref|YP_602793.1| phage terminase [Streptococcus pyogenes MG... 979 0.0
ref|YP_001128235.1| putative phage terminase [Streptococcus... 963 0.0
ref|YP_329267.1| prophage LambdaSa03, terminase, large subu... 930 0.0
ref|NP_687612.1| hypothetical protein SAG0585 [Streptococcu... 929 0.0
ref|ZP_00875005.1| Phage Terminase [Streptococcus suis 89/1... 780 0.0
ref|ZP_02920662.1| hypothetical protein STRINF_01543 [Strep... 710 0.0
ref|ZP_01826425.1| hypothetical protein CGSSp11BS70_06735 [... 706 0.0
ref|NP_695057.1| putative terminase [Lactococcus phage r1t]... 700 0.0
ref|NP_996704.1| TerL [Lactococcus phage phiLC3] >gi|455046... 699 0.0
ref|NP_862877.1| gp38 [Streptococcus phage SM1] >gi|3244162... 696 0.0
ref|ZP_02918401.1| hypothetical protein BIFDEN_01707 [Bifid... 175 6e-42
ref|ZP_01772587.1| Hypothetical protein COLAER_01597 [Colli... 170 2e-40
ref|YP_001285578.1| gp2 [Propionibacterium phage PA6] >gi|9... 153 3e-35
ref|YP_001800806.1| hypothetical protein cu1412 [Corynebact... 147 2e-33
ref|YP_880086.1| phage terminase, large subunit, putative [... 136 4e-30
ref|ZP_00120832.1| hypothetical protein Blon03000707 [Bifid... 130 3e-28
ref|ZP_02029188.1| hypothetical protein BIFADO_01641 [Bifid... 129 6e-28
ref|NP_569740.1| putative terminase gp4 [Mycobacterium phag... 123 3e-26
ref|YP_655519.1| gp2 [Mycobacterium phage Halo] >gi|9198053... 115 5e-24
ref|NP_737451.1| putative phage associated protein [Coryneb... 106 4e-21
ref|YP_061505.1| phage-related terminase [Leifsonia xyli su... 96 5e-18
ref|NP_817883.1| gp32 [Mycobacterium phage Corndog] >gi|294... 92 1e-16
ref|YP_001552334.1| gp5 [Mycobacterium phage Giles] >gi|159... 91 3e-16
ref|YP_655891.1| gp26 [Mycobacterium phage Wildcat] >gi|919... 87 3e-15
ref|NP_818312.1| gp11 [Mycobacterium phage Omega] >gi|29425... 80 2e-13
ref|YP_001456732.1| gp2, terminase [Corynebacterium phage B... 75 1e-11
ref|YP_063142.1| phage-related terminase [Leifsonia xyli su... 70 5e-10
ref|YP_001538502.1| phage-related terminase [Salinispora ar... 57 5e-06
ref|YP_001294797.1| probable terminase [Microbacterium phag... 49 6e-04
emb|CAI44887.1| putative terminase ATPase subunit [Human he... 48 0.001
ref|NP_040165.1| DNA packaging terminase subunit 1 [Human h... 48 0.001
gb|ABH08471.1| putative terminase ATPase subunit [Human her... 48 0.001
ref|NP_817679.1| gp2 [Mycobacterium phage Che9c] >gi|294248... 47 0.003
ref|NP_077457.1| DNA packaging terminase subunit 1 [Cercopi... 46 0.007
ref|NP_944422.2| DNA packaging terminase subunit 1 [Psittac... 43 0.041
ref|YP_850658.1| helicase family protein [Listeria welshime... 43 0.061
ref|NP_045342.1| DNA packaging terminase subunit 1 [Bovine ... 42 0.070
ref|NP_954931.1| DNA packaging terminase subunit 1 [Bovine ... 41 0.16
ref|YP_001548152.1| protein of unknown function DUF264 [Met... 41 0.17
gb|ABI63477.1| UL15 [Human herpesvirus 1] 41 0.18
ref|NP_044616.1| DNA packaging terminase subunit 1 [Human h... 41 0.20
ref|NP_045262.1| DNA packaging terminase subunit 1 [Equid h... 41 0.20
ref|YP_053090.1| DNA packaging terminase subunit 1 [Equid h... 41 0.20
ref|YP_443861.1| DNA packaging terminase subunit 1 [Cercopi... 41 0.26
ref|NP_851874.1| DNA packaging terminase subunit 1 [Cercopi... 40 0.38
gb|AAO38880.1| UL15 [Pseudorabies virus] 40 0.43
ref|NP_044484.1| DNA packaging terminase subunit 1 [Human h... 40 0.49
ref|YP_068358.1| DNA packaging terminase subunit 1 [Suid he... 40 0.52
ref|YP_164457.1| DNA packaging terminase subunit 1 [Cercopi... 39 0.73
ref|ZP_02688711.1| hypothetical protein LmonFSL_15775 [List... 38 1.4
ref|NP_785918.1| prophage Lp3 protein 15, terminase large s... 37 2.5
ref|ZP_02525767.1| lichenysin synthetase A [Bacillus cereus... 37 2.5
ref|YP_921784.1| hypothetical protein Noca_0555 [Nocardioid... 37 2.6
ref|ZP_02321202.1| helicase family protein [Listeria monocy... 37 4.5
ref|ZP_01933647.1| hypothetical protein LMMG_02022 [Listeri... 36 4.9
ref|NP_466036.1| hypothetical protein lmo2513 [Listeria mon... 36 5.0
ref|ZP_00233707.1| competence protein, putative [Listeria m... 36 5.5
ref|ZP_01931069.1| hypothetical protein LMIG_01586 [Listeri... 36 5.7
ref|YP_015074.1| helicase family protein [Listeria monocyto... 36 5.8
gb|AAY57689.1| ORF45 [Human herpesvirus 3] >gi|66866114|gb|... 36 6.1
ref|ZP_01928443.1| hypothetical protein LMHG_01562 [Listeri... 36 7.8
ref|NP_572214.1| CG15930 CG15930-PA [Drosophila melanogaste... 35 9.5
>ref|NP_269542.1| hypothetical protein SPy_1460 [Streptococcus pyogenes M1 GAS]
gb|AAK34263.1| conserved hypothetical protein - phage associated [Streptococcus
pyogenes M1 GAS]
Length = 471
Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/471 (100%), Positives = 471/471 (100%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL
Sbjct: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY
Sbjct: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL
Sbjct: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS
Sbjct: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK
Sbjct: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV
Sbjct: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC
Sbjct: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
>ref|YP_282552.1| phage terminase [Streptococcus pyogenes MGAS5005]
gb|AAZ51807.1| phage terminase [Streptococcus pyogenes MGAS5005]
Length = 471
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/471 (99%), Positives = 471/471 (100%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL
Sbjct: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYIV+LWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY
Sbjct: 61 WVHQKYGYAIPRRNGKTEVVYIVELWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL
Sbjct: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS
Sbjct: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK
Sbjct: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV
Sbjct: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC
Sbjct: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
>ref|YP_060535.1| Phage terminase [Streptococcus pyogenes MGAS10394]
gb|AAT87352.1| Phage terminase [Streptococcus pyogenes MGAS10394]
Length = 476
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/471 (99%), Positives = 471/471 (100%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL
Sbjct: 6 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 65
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYIV+LWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY
Sbjct: 66 WVHQKYGYAIPRRNGKTEVVYIVELWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 125
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL
Sbjct: 126 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 185
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS
Sbjct: 186 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 245
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 246 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 305
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK
Sbjct: 306 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 365
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VVIDGASGQELLAQEMK+QGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV
Sbjct: 366 VVIDGASGQELLAQEMKEQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 425
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC
Sbjct: 426 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 476
>ref|NP_664919.1| putative terminase - phage associated [Streptococcus pyogenes
MGAS315]
ref|NP_795519.1| putative terminase [Streptococcus pyogenes phage 315.3]
ref|NP_802011.1| conserved hypothetical protein (phage associated) [Streptococcus
pyogenes SSI-1]
gb|AAM79722.1| putative terminase - phage-associated [Streptococcus pyogenes
MGAS315]
dbj|BAC63844.1| conserved hypothetical protein (phage associated) [Streptococcus
pyogenes SSI-1]
Length = 471
Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/471 (99%), Positives = 471/471 (100%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL
Sbjct: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYIV+LWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY
Sbjct: 61 WVHQKYGYAIPRRNGKTEVVYIVELWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL
Sbjct: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS
Sbjct: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK
Sbjct: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VVIDGASGQELLAQEMK+QGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV
Sbjct: 361 VVIDGASGQELLAQEMKEQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC
Sbjct: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
>ref|NP_607550.1| hypothetical protein spyM18_1474 [Streptococcus pyogenes MGAS8232]
gb|AAL98049.1| conserved hypothetical phage protein [Streptococcus pyogenes
MGAS8232]
Length = 471
Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/471 (99%), Positives = 471/471 (100%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL
Sbjct: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYIV+LWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY
Sbjct: 61 WVHQKYGYAIPRRNGKTEVVYIVELWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL
Sbjct: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS
Sbjct: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK
Sbjct: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VVIDGASGQELLAQE+KDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV
Sbjct: 361 VVIDGASGQELLAQELKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHW+CYTTKPKRKQRTSC
Sbjct: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWVCYTTKPKRKQRTSC 471
>ref|YP_602793.1| phage terminase [Streptococcus pyogenes MGAS10750]
gb|ABF38249.1| phage terminase [Streptococcus pyogenes MGAS10750]
Length = 476
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/471 (99%), Positives = 470/471 (99%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQ NMLIPIMA+DE+GL
Sbjct: 6 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQENMLIPIMAVDEDGL 65
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYIV+LWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY
Sbjct: 66 WVHQKYGYAIPRRNGKTEVVYIVELWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 125
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL
Sbjct: 126 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 185
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS
Sbjct: 186 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 245
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 246 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 305
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK
Sbjct: 306 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 365
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV
Sbjct: 366 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 425
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC
Sbjct: 426 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 476
>ref|YP_001128235.1| putative phage terminase [Streptococcus pyogenes str. Manfredo]
emb|CAM29999.1| putative phage terminase [Streptococcus pyogenes str. Manfredo]
Length = 471
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/471 (97%), Positives = 466/471 (98%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQ NMLIPIMA+DE+GL
Sbjct: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQENMLIPIMAVDEDGL 60
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYIV+LWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY
Sbjct: 61 WVHQKYGYAIPRRNGKTEVVYIVELWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFK+SGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL
Sbjct: 121 VDGEDFISNKAKGQERIEFKSSGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSV EM I+DV
Sbjct: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVDEMQPIHDVK 240
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWYI+NPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 241 SWYIANPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK
Sbjct: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VVIDGASGQELLAQEMK+QGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV
Sbjct: 361 VVIDGASGQELLAQEMKEQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC
Sbjct: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
>ref|YP_329267.1| prophage LambdaSa03, terminase, large subunit, putative
[Streptococcus agalactiae A909]
gb|ABA45946.1| prophage LambdaSa03, terminase, large subunit, putative
[Streptococcus agalactiae A909]
Length = 471
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/471 (92%), Positives = 459/471 (97%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTK KLGNQRPTQSVNLHFAK+LAHEAINYYKKTGLSCY WQ NMLIP+MAI+E+ L
Sbjct: 1 MVTKTKAKLGNQRPTQSVNLHFAKTLAHEAINYYKKTGLSCYLWQENMLIPMMAINEDNL 60
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYI++LWALHKGLKILHTAHRISTSH+SFEKVKKYLEMSGY
Sbjct: 61 WVHQKYGYAIPRRNGKTEVVYILELWALHKGLKILHTAHRISTSHSSFEKVKKYLEMSGY 120
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFK+SG+VIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL
Sbjct: 121 VDGEDFISNKAKGQERIEFKSSGSVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFE+YRK+CLKG++RYSGWAEWSV EM I+DV
Sbjct: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFESYRKECLKGDRRYSGWAEWSVDEMQPIHDVK 240
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWY++NPSMG+HLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 241 SWYVANPSMGYHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAAR SENKVFVE IDCLS+RNGTQWIINFLKSADIAK
Sbjct: 301 ELKSKLFVGIKFGQDGNNVSLSIAARASENKVFVEAIDCLSIRNGTQWIINFLKSADIAK 360
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VVIDGASGQELLAQEM++ GLKKPELPKVAEIITAN MWEQGIMQETICH+DQPSLTAVV
Sbjct: 361 VVIDGASGQELLAQEMREHGLKKPELPKVAEIITANTMWEQGIMQETICHNDQPSLTAVV 420
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC
Sbjct: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
>ref|NP_687612.1| hypothetical protein SAG0585 [Streptococcus agalactiae 2603V/R]
gb|AAM99484.1|AE014218_1 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
Length = 471
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/471 (92%), Positives = 459/471 (97%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTK KLGNQRPTQSVNLHFAK+LAHEAINYYKKTGLSCY WQ NMLIP+MAI+E+ L
Sbjct: 1 MVTKTKAKLGNQRPTQSVNLHFAKTLAHEAINYYKKTGLSCYLWQENMLIPMMAINEDNL 60
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTEVVYI++LWALHKGLKILHTAHRISTSH+SFEKVKKYLEMSGY
Sbjct: 61 WVHQKYGYAIPRRNGKTEVVYILELWALHKGLKILHTAHRISTSHSSFEKVKKYLEMSGY 120
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
VDGEDFISNKAKGQERIEFK+SG+VIQFRTRTSNGGLGEGFDLLIIDEAQEYT+EQESAL
Sbjct: 121 VDGEDFISNKAKGQERIEFKSSGSVIQFRTRTSNGGLGEGFDLLIIDEAQEYTAEQESAL 180
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMTIMCGTPPTMVSTGTVFE+YRK+CLKG++RYSGWAEWSV EM I+DV
Sbjct: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFESYRKECLKGDRRYSGWAEWSVDEMQPIHDVK 240
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWY++NPSMG+HLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP
Sbjct: 241 SWYVANPSMGYHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
ELKSKLFVGIKFGQDGNNVSLSIAAR SENKVFVE IDCLSVRNGTQWIINFLKSADIAK
Sbjct: 301 ELKSKLFVGIKFGQDGNNVSLSIAARASENKVFVEAIDCLSVRNGTQWIINFLKSADIAK 360
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VV+DGASGQELLAQEM++ GLKKPELPKVAEIITAN MWEQGIMQETICH+DQPSLTAVV
Sbjct: 361 VVVDGASGQELLAQEMREHGLKKPELPKVAEIITANTMWEQGIMQETICHNDQPSLTAVV 420
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC
Sbjct: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTSC 471
>ref|ZP_00875005.1| Phage Terminase [Streptococcus suis 89/1591]
gb|EAP40834.1| Phage Terminase [Streptococcus suis 89/1591]
Length = 471
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/470 (76%), Positives = 413/470 (87%)
Query: 1 MVTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGL 60
MVTKTKT+LGNQRPTQSV LH+ +SLAHEAI Y+KTG +CYPWQVN+L IM ID NGL
Sbjct: 1 MVTKTKTRLGNQRPTQSVTLHYVESLAHEAIELYQKTGRNCYPWQVNLLENIMGIDNNGL 60
Query: 61 WVHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGY 120
WVHQKYGYAIPRRNGKTE VYI++LWALH GL+ILHTAHRISTSH+SFE +KK LE GY
Sbjct: 61 WVHQKYGYAIPRRNGKTEDVYILELWALHHGLRILHTAHRISTSHSSFEALKKLLEDMGY 120
Query: 121 VDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESAL 180
V+ DF+SNKAKGQERIEFK++G+VIQ+RTRTSNGGLGEGFDLLIIDEAQEYT EQESAL
Sbjct: 121 VEDVDFVSNKAKGQERIEFKSTGSVIQYRTRTSNGGLGEGFDLLIIDEAQEYTVEQESAL 180
Query: 181 KYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVS 240
KYTVTDSDNPMT+MCGTPPTMVSTGTVF +R L G YSGW+EWSV ++ +ND+
Sbjct: 181 KYTVTDSDNPMTVMCGTPPTMVSTGTVFTNFRTKVLAGKSEYSGWSEWSVEDIKDVNDID 240
Query: 241 SWYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
SWY++NPS+G+HL ERKI+AE+G+DE+DHNIQRLGYWPSFNQKS ISE EW +LKV+ VP
Sbjct: 241 SWYLTNPSLGYHLTERKIKAEIGDDELDHNIQRLGYWPSFNQKSAISENEWKRLKVDDVP 300
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAK 360
EL KLFVGIK+GQDG+NVS+SIAART + K+F+E IDC SVRNG QWIINFL++ADI K
Sbjct: 301 ELSGKLFVGIKYGQDGSNVSMSIAARTIDKKIFIEVIDCQSVRNGMQWIINFLQTADIEK 360
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
VV+DGA+GQ LLA EMKD L++P +P V+EIITAN +WEQ I+QET+ H++QPSLT VV
Sbjct: 361 VVVDGANGQTLLANEMKDFKLREPIMPTVSEIITANSVWEQAIVQETLRHANQPSLTEVV 420
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTS 470
TNC+KR IGSNGGFGYKSLYDDRDISLMDSALLAHW+CY TKPKRKQR S
Sbjct: 421 TNCDKRNIGSNGGFGYKSLYDDRDISLMDSALLAHWVCYMTKPKRKQRIS 470
>ref|ZP_02920662.1| hypothetical protein STRINF_01543 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gb|EDT47242.1| hypothetical protein STRINF_01543 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 470
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/469 (69%), Positives = 389/469 (82%)
Query: 2 VTKTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLW 61
+ + K KLGNQ PTQSV L F KSL+HEAI Y++TGL YPWQ N+L +M I+E+GLW
Sbjct: 1 MAEIKKKLGNQNPTQSVILPFDKSLSHEAIEIYERTGLKSYPWQQNLLKSVMGIEEDGLW 60
Query: 62 VHQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYV 121
HQK+GY+IPRRNGKTE++Y+++LW L+ GL ILHTAHRISTSH+SFEKVK+YLE G
Sbjct: 61 THQKFGYSIPRRNGKTEIIYMLELWGLYHGLNILHTAHRISTSHSSFEKVKRYLEKMGLE 120
Query: 122 DGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALK 181
DG+ F S +AKGQERIE +G V+Q+RTRTSNGGLGEGFDLL+IDEAQEYT+EQESALK
Sbjct: 121 DGKSFNSIRAKGQERIELYETGGVVQYRTRTSNGGLGEGFDLLVIDEAQEYTTEQESALK 180
Query: 182 YTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVSS 241
YTVTDSDNPMTIMCGTPPT VS+GTVF YR+ CL G +Y GWAEWSV E +I+D+ +
Sbjct: 181 YTVTDSDNPMTIMCGTPPTPVSSGTVFTKYRETCLFGRGKYLGWAEWSVSEEKEIDDIDA 240
Query: 242 WYISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVPE 301
WY SNPSMGFHLNERKIEAELGED++DHN+QRLGYWP++NQKS ISE EW LK++ +P+
Sbjct: 241 WYNSNPSMGFHLNERKIEAELGEDKLDHNVQRLGYWPTYNQKSAISETEWNALKIDDLPQ 300
Query: 302 LKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAKV 361
L+ +LFVGIK+GQDG NV+LS+A RT + +FVET+DC SVRNG WIINFLK ADIA++
Sbjct: 301 LQGQLFVGIKYGQDGTNVALSVAVRTKDKHIFVETVDCQSVRNGNHWIINFLKQADIAQI 360
Query: 362 VIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVT 421
VIDGASGQ++L E+KD +K LP V EII AN MWEQ I Q+T+CH+ QPSLT V T
Sbjct: 361 VIDGASGQKILNDELKDFHIKNTILPTVKEIIVANSMWEQAIYQQTLCHASQPSLTKVAT 420
Query: 422 NCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTS 470
NC+KR IGSNGGFGY+S +DD DISLMDSALLAHW C TTKPK+KQ+ S
Sbjct: 421 NCDKRNIGSNGGFGYRSHFDDMDISLMDSALLAHWACATTKPKKKQKVS 469
>ref|ZP_01826425.1| hypothetical protein CGSSp11BS70_06735 [Streptococcus pneumoniae
SP11-BS70]
gb|EDK62252.1| hypothetical protein CGSSp11BS70_06735 [Streptococcus pneumoniae
SP11-BS70]
Length = 470
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/467 (69%), Positives = 388/467 (83%), Gaps = 2/467 (0%)
Query: 6 KTKLGNQRPTQSVNLHFAK--SLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVH 63
+ KLGNQ PTQSV L + K S A EA+ Y++TGLSCY WQVN+L IMA+D+NGLWVH
Sbjct: 3 RKKLGNQNPTQSVILKYVKKNSKAKEAVEIYERTGLSCYAWQVNLLTSIMAVDKNGLWVH 62
Query: 64 QKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDG 123
QK+GY+IPRRNGK+E++Y+ +LW LH GL ILHTAHRISTSH+SFEKVK+YLE GYVDG
Sbjct: 63 QKFGYSIPRRNGKSELLYLFELWGLHNGLNILHTAHRISTSHSSFEKVKRYLEKMGYVDG 122
Query: 124 EDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYT 183
EDF S +AKGQERIE G ++QFRTRTSNGGLGEGFDLL+IDEAQEYT+EQESALKYT
Sbjct: 123 EDFSSIRAKGQERIELFDGGGIVQFRTRTSNGGLGEGFDLLVIDEAQEYTTEQESALKYT 182
Query: 184 VTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVSSWY 243
VTDS NP+TIMCGTPPT VS GTVF YRK+CL G +YSGWAEWSV E +I+DV +WY
Sbjct: 183 VTDSSNPITIMCGTPPTPVSNGTVFTNYRKNCLFGKGKYSGWAEWSVSEEKEIDDVDAWY 242
Query: 244 ISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVPELK 303
SNPSMG+HLNERKIEAELG+D++DHN+QRLGYWP +NQKS ISE EW +L V+ +P+L
Sbjct: 243 NSNPSMGYHLNERKIEAELGDDKLDHNVQRLGYWPEYNQKSAISETEWNELCVDSIPDLS 302
Query: 304 SKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAKVVI 363
KLFVG+K+GQDG NV+LSIA RT + ++FVETIDC SVRNG WI++F+K AD+A +V+
Sbjct: 303 GKLFVGVKYGQDGANVALSIAVRTVDERIFVETIDCQSVRNGNDWILDFVKRADVATIVV 362
Query: 364 DGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNC 423
DGASGQ++L +E+K + +K LP V EII AN MWEQGI Q+T+CH+ QPSL + TNC
Sbjct: 363 DGASGQKILDEELKKERMKSVILPTVKEIIVANSMWEQGIYQKTLCHAGQPSLKKITTNC 422
Query: 424 EKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQRTS 470
EKR IGSNGGFGY+S + D DISLMDSALLAHW C TTKPK+KQ+ S
Sbjct: 423 EKRNIGSNGGFGYRSHFADMDISLMDSALLAHWACMTTKPKKKQKIS 469
>ref|NP_695057.1| putative terminase [Lactococcus phage r1t]
gb|AAB18704.1| ORF29 [Lactococcus phage r1t]
Length = 469
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/461 (70%), Positives = 383/461 (83%)
Query: 8 KLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQKYG 67
+ GNQ PTQSV L F ++ EAI Y+K+ CYPWQ N+L +MAIDE+GLW HQK+G
Sbjct: 6 RFGNQYPTQSVILPFTETKYQEAIEIYEKSKHECYPWQKNLLKEVMAIDEDGLWTHQKFG 65
Query: 68 YAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFI 127
Y+IPRRNGKTE+VYI++LW+L +GL ILHTAHRISTSH+S+EK+KKYLE SGYV+GEDF
Sbjct: 66 YSIPRRNGKTEIVYILELWSLVQGLSILHTAHRISTSHSSYEKLKKYLEDSGYVEGEDFK 125
Query: 128 SNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDS 187
S KAKGQER+E SG VIQFRTRTS+GGLGEGFD+L+IDEAQEYT+EQESALKYTVTDS
Sbjct: 126 SIKAKGQERLELIESGGVIQFRTRTSSGGLGEGFDILVIDEAQEYTTEQESALKYTVTDS 185
Query: 188 DNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNP 247
DNPMTIMCGTPPT VS+GTVF YR + + G +YSGWAEWSV ++ I+DV +WY SNP
Sbjct: 186 DNPMTIMCGTPPTPVSSGTVFTNYRDNTIAGKAKYSGWAEWSVEDVKDIHDVEAWYNSNP 245
Query: 248 SMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVPELKSKLF 307
SMG+HLNERKIEAELGED++DHN+QRLGYWP +NQKSVISE+EW LKV ++P +K KLF
Sbjct: 246 SMGYHLNERKIEAELGEDKLDHNVQRLGYWPKYNQKSVISEQEWNALKVNRLPVIKGKLF 305
Query: 308 VGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAKVVIDGAS 367
VGIK+G DG NV++SIA +T KVFVETIDC S+RNG QWIINFLK AD+ KVVIDG S
Sbjct: 306 VGIKYGNDGANVAMSIAVKTLSGKVFVETIDCQSIRNGNQWIINFLKKADVEKVVIDGQS 365
Query: 368 GQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEKRQ 427
GQ +L EMKD LK+P LP V EII AN +WEQGI Q+ CHS QPSL+ VVTNC+KR
Sbjct: 366 GQSILTSEMKDFKLKEPILPTVKEIINANSLWEQGIFQKNFCHSGQPSLSTVVTNCDKRN 425
Query: 428 IGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQR 468
IG++GGFGYKS +DD DISLMDSALLAHW C KPK+KQ+
Sbjct: 426 IGTSGGFGYKSQFDDMDISLMDSALLAHWACSNNKPKKKQQ 466
>ref|NP_996704.1| TerL [Lactococcus phage phiLC3]
gb|AAS66808.1| large subunit terminase; TerL [Bacteriophage phi LC3]
Length = 469
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/461 (70%), Positives = 381/461 (82%)
Query: 8 KLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQKYG 67
+ GNQ PTQSV L F ++ EAI Y+K+ CYPWQ N+L IMAIDE+GLW HQK+G
Sbjct: 6 RFGNQYPTQSVILPFTETKYQEAIEIYEKSKHECYPWQKNLLKEIMAIDEDGLWTHQKFG 65
Query: 68 YAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFI 127
Y+IPRRNGKTE+VYI++LWAL +GL ILHTAHRISTSH+S+EK+KKYLE SGYV+GEDF
Sbjct: 66 YSIPRRNGKTEIVYILELWALEQGLSILHTAHRISTSHSSYEKLKKYLEDSGYVEGEDFK 125
Query: 128 SNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDS 187
S KAKGQER+E SG VIQFRTRTS+GGLGEGFD+L IDEAQEYT+EQESALKYTVTDS
Sbjct: 126 SIKAKGQERLELIESGGVIQFRTRTSSGGLGEGFDILFIDEAQEYTTEQESALKYTVTDS 185
Query: 188 DNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNP 247
DNPMTIMCGTPPT VS+GTVF YR + L G +YSGWAEWSV ++ I+DV +WY SNP
Sbjct: 186 DNPMTIMCGTPPTPVSSGTVFTNYRDNTLAGKAKYSGWAEWSVEDVKDIHDVEAWYNSNP 245
Query: 248 SMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVPELKSKLF 307
SMG+HLNERKIEAELGED++DHN+QRLGYWP +NQKSVISE+EW LKV ++P +K KLF
Sbjct: 246 SMGYHLNERKIEAELGEDKLDHNVQRLGYWPKYNQKSVISEQEWNALKVNRLPVIKGKLF 305
Query: 308 VGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAKVVIDGAS 367
VGIK+G DG NV++SIA +T KVFVETIDC S+RNG QWIINFLK AD+ KVVIDG S
Sbjct: 306 VGIKYGNDGANVAMSIAVKTLSGKVFVETIDCQSIRNGNQWIINFLKKADVEKVVIDGQS 365
Query: 368 GQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEKRQ 427
GQ +L EMKD LK+P LP V EII AN +WEQGI Q+ CHS QPSL+ VVTNC+KR
Sbjct: 366 GQSILTSEMKDFKLKEPILPTVKEIINANSLWEQGIFQKNFCHSGQPSLSTVVTNCDKRN 425
Query: 428 IGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTKPKRKQR 468
IG++GGFGYKS +DD DISLMDSALLAHW C K K+KQ+
Sbjct: 426 IGTSGGFGYKSQFDDMDISLMDSALLAHWACSNNKLKKKQQ 466
>ref|NP_862877.1| gp38 [Streptococcus phage SM1]
gb|AAP81920.1| gp38 [Streptococcus mitis phage SM1]
Length = 459
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/456 (69%), Positives = 388/456 (85%), Gaps = 2/456 (0%)
Query: 5 TKTKLGNQRPTQSVNLHFAK--SLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWV 62
+ KLGNQ PTQSV L + K S A EAI Y++TGLSCY WQ N+L+P+MA+D+NGLWV
Sbjct: 2 ARKKLGNQNPTQSVILKYVKKNSKAKEAIELYERTGLSCYAWQKNLLLPMMAVDKNGLWV 61
Query: 63 HQKYGYAIPRRNGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVD 122
HQK+GY+IPRRNGK+E++YI ++W LH+GL ILHTAHRISTSHASFEKVK+YLE GYVD
Sbjct: 62 HQKFGYSIPRRNGKSELLYIGEIWGLHEGLNILHTAHRISTSHASFEKVKRYLEKMGYVD 121
Query: 123 GEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKY 182
GEDF S +AKGQERIE ++G VIQFRTRTSNGGLGEGFD+LIIDEAQEYT+EQESALKY
Sbjct: 122 GEDFNSIRAKGQERIELYSTGGVIQFRTRTSNGGLGEGFDMLIIDEAQEYTTEQESALKY 181
Query: 183 TVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVSSW 242
TVTDS+NP+TIMCGTPPT VS+GTVF YR+ CL G +YSGWAEWSV + +I+DV +W
Sbjct: 182 TVTDSENPITIMCGTPPTPVSSGTVFTKYRETCLFGKGKYSGWAEWSVSDEKEIDDVEAW 241
Query: 243 YISNPSMGFHLNERKIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVPEL 302
Y SNPSMG+HLNERKIEAELGED++DHNIQRLG+WP++NQKS ISE EW +LK++ +PEL
Sbjct: 242 YNSNPSMGYHLNERKIEAELGEDKLDHNIQRLGFWPTYNQKSAISETEWNELKMDDIPEL 301
Query: 303 KSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAKVV 362
KL VGIK+GQDG NV++SIAART++ + FVET+DC SVRNG +W++ FL+ AD+A++V
Sbjct: 302 SGKLSVGIKYGQDGTNVAMSIAARTNDGRFFVETVDCQSVRNGNEWMVAFLRQADVAQIV 361
Query: 363 IDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTN 422
IDGASGQ++L +E+KD +K LP V EII AN +WEQGI Q+TICH+ QPSL+ V TN
Sbjct: 362 IDGASGQKILDEELKDYRIKNVILPTVKEIIVANALWEQGIYQKTICHAGQPSLSKVATN 421
Query: 423 CEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWIC 458
C+KR IGSNGGFGY+S +DD +ISLMDSALLAHW C
Sbjct: 422 CDKRNIGSNGGFGYRSHFDDMNISLMDSALLAHWAC 457
>ref|ZP_02918401.1| hypothetical protein BIFDEN_01707 [Bifidobacterium dentium ATCC
27678]
gb|EDT45869.1| hypothetical protein BIFDEN_01707 [Bifidobacterium dentium ATCC
27678]
Length = 463
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 210/459 (45%), Gaps = 32/459 (6%)
Query: 38 GLSCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVVYIVQLW-ALHKGLKILH 96
G+ C PWQ +L +A D G + +PR+NGK +V +L+ A +G +ILH
Sbjct: 8 GMECDPWQRIVLKDWLATDTQGHLLATDAVVVLPRQNGKNGLVEEAELYKAAVQGRRILH 67
Query: 97 TAHRISTSHASFEKVKKYLEMSGYVDGEDFIS--NKAKGQERIEFKASGAVIQFRTRTSN 154
TAH + T+ F ++++Y + + Y + + + + GQE I K +G I+F R+ +
Sbjct: 68 TAHEVKTARRHFLRMQEYFDNADYPELKALVRYIRQTNGQEAIVLK-NGGSIEFIARSKS 126
Query: 155 GGLGEGFDLLIIDEAQEYTSEQESALKYTVT--DSDNPMTI-MCGTPPTMVSTGTVFEAY 211
G G D L +DEAQE T EQ AL+ ++ S +P T+ M P + Y
Sbjct: 127 SGRGFTCDDLTLDEAQELTDEQLEALRPVISAAPSGDPQTLFMGTPTPPTSPGTVLVRMY 186
Query: 212 RKDCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFHLNERKIEAELGEDEIDHNI 271
+ W EW+V + D W NP++G L E IEAE +
Sbjct: 187 KAAHSDAPPARLAWLEWAVDAVGDPLDRRRWRRVNPALGIRLKEEVIEAEAASFSPESFA 246
Query: 272 -QRLGYWPSF-NQKSVISEKEWAKLKVEQVPELKSKLFVGIKFGQDGNNVSLSIAARTSE 329
+RLG+W + S +WA+ P + +KFG DG++VSL+ R
Sbjct: 247 RERLGWWDVHTDSDSDYPITDWAECSTNTPPSDGYAAYA-VKFGFDGSHVSLAACLRPEA 305
Query: 330 NKV--FVETIDCLSVRNGTQWIINFLKSADIAK----------VVIDGASGQELLAQEMK 377
VE +D S++ G W+++FL D A V +DG SG L Q +
Sbjct: 306 EGTPPHVELVDYRSMKAGVGWLVDFLTGEDPAHGGPRWKSSLGVTVDGRSGSATLTQALL 365
Query: 378 DQG-----LKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEKRQIGSNG 432
D G L+ P V E I +EQ + Q + QP + + + R IG +G
Sbjct: 366 DAGVYQRLLRTPNAGTVGESIVG---FEQAVQQHALTQFSQPIIDTAASYAKHRPIGRSG 422
Query: 433 GFGYKSLYDDRDISLMDSALLAHWICYTTK--PKRKQRT 469
FGY+ ++ D +++ LA+ + T+K P RKQR
Sbjct: 423 LFGYEPSRENIDTDPLEALALAYGLARTSKRHPGRKQRA 461
>ref|ZP_01772587.1| Hypothetical protein COLAER_01597 [Collinsella aerofaciens ATCC
25986]
gb|EBA39302.1| Hypothetical protein COLAER_01597 [Collinsella aerofaciens ATCC
25986]
Length = 455
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 216/460 (46%), Gaps = 45/460 (9%)
Query: 44 WQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVVYIVQLWALHK-GLKILHTAHRIS 102
WQ +L A D G + G +PR+NGK V+ I +++ L G ILHTAHR+
Sbjct: 6 WQSLVLSDWCACDAEGRPAYVTCGLDVPRQNGKNAVIEIYEVFRLAVCGWHILHTAHRVK 65
Query: 103 TSHASFEKVKKYL------EMSGYVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGG 156
T+ +F ++ +Y E+S V+ + G+E I + +G I+F RT+ G
Sbjct: 66 TAKKAFNRLVRYFTDKEHPELSCLVE----RIRRTNGEEAI-YLTNGGSIKFSARTN--G 118
Query: 157 LGEGFD---LLIIDEAQEYTSEQESALKYTVTDSDNP--MTIMCGTPPTMVSTGTVFEAY 211
GFD L++ DEAQE T Q A+ YT+ S I GTPP GTVF
Sbjct: 119 SARGFDDIQLVVFDEAQELTDSQYDAIMYTLAASATGERQIIYTGTPPNEDCPGTVFART 178
Query: 212 RKDCLKGNKRYSGWAEWSVPEMVK----INDVSSW-YISNPSMGFHLNERKIEAELGEDE 266
R L G+ + W W+ E + +DV Y SNPSMG L+ E
Sbjct: 179 RAAILAGDIPSTEWCSWATDECPRQDATFDDVVDLIYESNPSMGIILSLDFTRTEFAGGS 238
Query: 267 I-DHNIQRLGYW-PSFNQKSVISEKEWAKLKVEQVPE-LKSKLFVGIKFGQDGNNVSLS- 322
I +RLG++ P+ I + W ++ + + + K G+KF +DG+ +LS
Sbjct: 239 ITGFAHERLGWFSPAAMLTRAIPRESWGAALIDAIGDRYRGKKAFGVKFSRDGSTYALSG 298
Query: 323 --IAARTSENKVFVETIDCLSVRNGT----QWIINFLKSADIAKVVIDGASGQELLAQEM 376
+ R + K VE I + G +W+ + +A + VVIDG SG + L +
Sbjct: 299 CKLGQRALKGKAAVELIRVGTTAGGARELAEWLYDRRTTASV--VVIDGMSGADALIDRL 356
Query: 377 KDQGLKKPE----LPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEKRQIGSNG 432
+ +K P P+ +++ A + + + T+ H+ P+L C +R+IGS G
Sbjct: 357 AE--MKPPRGYVVRPQTRDVVAAAVGFVDALNDGTLAHTYDPTLEESARKCVRRKIGSRG 414
Query: 433 GFGYKSLYDDR-DISLMDSALLAHWICYTTK--PKRKQRT 469
G+G+ S D ++S LA W TTK P+RKQRT
Sbjct: 415 GWGFGSPEDATVPPEPLESCSLALWGARTTKRNPRRKQRT 454
>ref|YP_001285578.1| gp2 [Propionibacterium phage PA6]
gb|ABE68571.1| gp2 [Propionibacterium phage PA6]
Length = 503
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 229/475 (48%), Gaps = 41/475 (8%)
Query: 9 LGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQKYGY 68
+G+Q P V ++ S +A + GL+ PWQ +L +A+ NG G
Sbjct: 5 VGSQVPRHRVAAAYSVSAGGDAGELGRAYGLTPDPWQQQVLDDWLAVGSNGRLASGVCGV 64
Query: 69 AIPRRNGKTEVVYIVQLW-ALHKGLKILHTAHRISTSHASFEKVKKYLEMS-GYVDGEDF 126
+PR+NGK ++ IV+L+ A +G +ILHTAH + ++ +F +++ + E + D
Sbjct: 65 FVPRQNGKNAILEIVELFKATIQGRRILHTAHELKSARKAFMRLRSFFENERQFPDLYRM 124
Query: 127 ISN--KAKGQERI------------EFKASG-AVIQFRTRTSNGGLGEGFDLLIIDEAQE 171
+ + GQE I + SG ++F R+ G D L+ DEAQE
Sbjct: 125 VKSIRATNGQEAIVLHHPDCATFEKKCGCSGWGSVEFVARSRGSARGFTVDDLVCDEAQE 184
Query: 172 YTSEQESALKYTVT--DSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWS 229
+ EQ AL TV+ S +P I GTPP ++ G+V R L G KR++ W E+S
Sbjct: 185 LSDEQLEALLPTVSAAPSGDPQQIFLGTPPGPLADGSVVLRLRGQALGGGKRFA-WTEFS 243
Query: 230 VPEMVKINDVSSWYI-----SNPSMGFHLNERKIEAEL-GEDEIDHNIQRLGYWPSF-NQ 282
+P+ +DVS + +NP++G LN + E +RLG+W +
Sbjct: 244 IPDESDPDDVSRQWRKLAGDTNPALGRRLNFGTVSDEHESMSAAGFARERLGWWDRGQSA 303
Query: 283 KSVISEKEWAKLKVEQVPELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLS- 341
SV+ +WA+ V++ + K+F G+ F + G+ V+L+ A +T + V VE ID LS
Sbjct: 304 ASVVPADKWAQSAVDEASLVGGKVF-GVSFSRSGDRVALAGAGKT-DAGVHVEVIDGLSG 361
Query: 342 -VRNGTQWIINFL--KSADIAKVVIDGASGQELLAQEMKDQGL--KKPELPKVAEIITAN 396
+ +G + ++L + D ++++ G SG LL + + D+G+ + + + A
Sbjct: 362 TIVDGVGRLADWLAVRWGDTDRIMVAG-SGAVLLQKALTDRGIPGRGVVVADTGVYVEAC 420
Query: 397 MMWEQGIMQETICH----SDQPSLTAVVTNCEKRQIGSNGGFGYKSLYDDRDISL 447
+ +G+ I H S + L V + +++ GS G+G S D ++ L
Sbjct: 421 QAFLEGVRSGVISHPRADSRRDMLDIAVRSAVQKRKGSAWGWG-SSFKDGSEVPL 474
>ref|YP_001800806.1| hypothetical protein cu1412 [Corynebacterium urealyticum DSM 7109]
emb|CAQ05372.1| hypothetical protein [Corynebacterium urealyticum DSM 7109]
Length = 480
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 200/464 (43%), Gaps = 28/464 (6%)
Query: 7 TKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQKY 66
+ +G Q P+ S S A +AI + GL+ P+Q +L A +G +
Sbjct: 5 SAVGKQTPSYSFFPTITASDATDAIELSEAYGLTPDPFQRFVLESWKARRADGKLASSRV 64
Query: 67 GYAIPRRNGKTEVVYIVQLW-ALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGED 125
G ++PR+NGK + +L+ L G K+LHTAH TS +F ++ + D
Sbjct: 65 GLSVPRQNGKNGALEASELFDILVLGRKVLHTAHETKTSQQAFRRLASFFRPEVNPDLAR 124
Query: 126 FISN--KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYT 183
+ + GQE I + +G I+F RT N G G D L++DEAQE E AL
Sbjct: 125 QVEQIRQVNGQEAIVLR-NGGEIRFIARTKNSGRGFTADTLVLDEAQELNMEALGALLPA 183
Query: 184 VTD--SDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVSS 241
++ + +P I GTPP + G +F R D + W EWS ++D
Sbjct: 184 ISSGPAGDPQQIYLGTPPGPTNDGEIFTKLRNDGHEATDPRLSWIEWSADRGCDLDDTEQ 243
Query: 242 WYISNPSMGFHLNERKIEAELGE-DEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVP 300
W +NP++G L + E D+ +RLG W + VI + +W +
Sbjct: 244 WAQANPALGTRLMWDVVYDERAALDDETFARERLGMWSTEESARVIPQADWEACAEPNMR 303
Query: 301 ELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGT-QW----IINFLKS 355
+ ++ + + + S++ A T + +V D + R+GT W I+
Sbjct: 304 DAGGEVAIAVDISPARSTASIAAAGLTVDGAPWV---DVIETRHGTPDWLLERIVAICGR 360
Query: 356 ADIAKVVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMM-----WEQGIMQETICH 410
+ V+IDG L +K + + KV+ NM + ++ + H
Sbjct: 361 QPVRAVLIDGKGPAASLIDPLKRRKI------KVSITTGYNMAAAAADFYDAVLSHRLVH 414
Query: 411 SDQPSLTAVVTNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLA 454
DQP+L V + KR++G + K + + DI+ + SA LA
Sbjct: 415 LDQPALNVAVASARKRRLGDAWAWNRKDV--ESDITPLVSATLA 456
>ref|YP_880086.1| phage terminase, large subunit, putative [Mycobacterium avium 104]
gb|ABK64998.1| phage terminase, large subunit, putative [Mycobacterium avium 104]
Length = 485
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 212/462 (45%), Gaps = 31/462 (6%)
Query: 29 EAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVVYIVQL-WA 87
+A+ K G PWQ ++ MA D+ G W+ + G + R+NGK + +V+L W
Sbjct: 2 DALECAKIAGRENIPWQELVVREGMATDDAGRWLAFEVGVLVARQNGKNGGIEVVELGWM 61
Query: 88 LHK-GLKILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFISNKAKGQERIEFKASGAVI 146
+++ G+ ILHTAH T+ S +K++ + ++ E + G+E I K + ++I
Sbjct: 62 INEPGVSILHTAHEFQTAMESMDKLEALILSHPLLENEVAQIRRGNGRESIRLK-NESII 120
Query: 147 QFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPP---TMVS 203
+FRTRT +GG G D L+IDEA ++ ++A+ +T + NP G+ T
Sbjct: 121 RFRTRTKSGGRGFSVDRLVIDEAMIWSPASQAAIMPLLTTAKNPQIWYLGSAADEETHEY 180
Query: 204 TGTVFEAYRKDCLKGNKRYSGWAEWSVPE--------MVKINDVSSWYISNPSMGFHLNE 255
G + + R L G+ W EWS PE V D ++W +NPSM + + E
Sbjct: 181 CGK-WASLRARALAGDDPKLLWLEWSAPEPPEDPAARRVWREDRANWAAANPSMDYLVTE 239
Query: 256 RKIEAELG---EDEIDHNIQRL--GYWP-SFNQKSVISEKEWAKLKVEQVPELKSKLFVG 309
IE EL D ++RL G WP + ++W L + P+L +
Sbjct: 240 EYIEDELAAFRRDLAKWEVERLSVGRWPKDITDVHIFPIEKWDALG-DGSPDLVNIYPQV 298
Query: 310 IKFGQDGNNVSLSIAA--RTSENKVFVET--IDCLSVRNGTQWIINFLKSADIAKVVIDG 365
I +D +IA RT++ +E S + +++ + AD A +VI+
Sbjct: 299 IAVDRDPVTKLWAIAGATRTADGHAHIEIGYNQAASATEVVEKLVDIVTQADPAALVIES 358
Query: 366 ASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEK 425
S +L + + G+ +P + +E+ A + + I HS+Q L V + K
Sbjct: 359 RSPAAVLKPYLIEAGI-EPVMTNTSELALACEGIVEAVEAAQITHSNQAVLNEAVISASK 417
Query: 426 RQIGSNGGFGYKSLYDDRDISLMDSALLAHW--ICYTTKPKR 465
R + + F + + + LM +A LAHW + ++ P R
Sbjct: 418 RDLPGD-RFAWDRKPGGQIVQLM-AATLAHWGLLTFSAPPTR 457
>ref|ZP_00120832.1| hypothetical protein Blon03000707 [Bifidobacterium longum DJO10A]
Length = 477
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 188/448 (41%), Gaps = 35/448 (7%)
Query: 44 WQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVVYIVQLWALHK-----GLKILHTA 98
WQ + I+A +G W + +IPR+ GKT Y + A+H+ G++I+ TA
Sbjct: 39 WQRQINRIILAKSADGFWSARNTVLSIPRQTGKT---YDIGWVAIHRAARTPGMRIVWTA 95
Query: 99 HRISTSHASFEKVKKYL---EMSGYVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNG 155
S +FE + + EMSG VD + IS A G+E I F+ +G+ I FR R
Sbjct: 96 QHFSVIKDTFESLCAIVLRPEMSGLVDPDHGIS-LAAGKEEIRFR-NGSRIFFRARERGA 153
Query: 156 GLG-EGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKD 214
G + LL+IDEAQ + +++ T + NP TI GTPP G F R
Sbjct: 154 LRGVKKIALLVIDEAQHLSDSAMASMLPTQNRAWNPQTIYMGTPPGPRDNGEAFTRLRDK 213
Query: 215 CLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFHLNERKIEAELGEDEIDHNIQR- 273
G + + E++ D W +NPS H ++ I A L E+ + +R
Sbjct: 214 ARAGRTHSTLYVEFTADRDADPLDRQQWRKANPSYPSHTSDESI-ANLWENLTGDDFRRE 272
Query: 274 -LGYWPSFNQKSVISEKEWAKLKVEQVPELKSKLFVGIKFGQDGNNVSLSIAARTSENKV 332
LG W I ++W + +E+ + GI +++ R +N
Sbjct: 273 ALGIWDEHALSRAIDRRQWEEATIERR-RPGGVMSFGIDMNPQRTRLTIGACMRYDDNTA 331
Query: 333 FVETIDCLSV-RNGTQWIINFLKSA--DIAKVVIDGASGQELLAQEMKDQGLKKPELPKV 389
+E + ++GT W +N + A +VIDG S L ++ G+ V
Sbjct: 332 HIELAEYRDTNQDGTMWAVNLIDKVWEQTASLVIDGQSPATALLPDLAQAGV------TV 385
Query: 390 AEIITANMMWEQGIMQE-----TICH---SDQPSLTAVVTNCEKRQIGSNGGFGYKSLYD 441
+M G +Q+ T+ H Q L R IG NG FG+ D
Sbjct: 386 TVTAATDMGRACGRLQDMLRDGTLTHLPEDGQQPLWQAAAKATTRPIGKNGLFGWNRPDD 445
Query: 442 DRDISLMDSALLAHWICYTTKPKRKQRT 469
D DIS +++ LA TT+ Q T
Sbjct: 446 DTDISPLNAVTLALHGAMTTRRDPTQET 473
>ref|ZP_02029188.1| hypothetical protein BIFADO_01641 [Bifidobacterium adolescentis
L2-32]
gb|EDN82589.1| hypothetical protein BIFADO_01641 [Bifidobacterium adolescentis
L2-32]
Length = 477
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 185/442 (41%), Gaps = 35/442 (7%)
Query: 43 PWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVVYIVQLWALHK-----GLKILHT 97
PWQ + ++A +G W + +IPR+ GKT Y + A+H+ G++I+ T
Sbjct: 38 PWQRQINRIVLAKSADGFWSARNAVLSIPRQTGKT---YDIGWVAIHRAARTPGMRIVWT 94
Query: 98 AHRISTSHASFEKVKKYL---EMSGYVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSN 154
A S +FE + + EMSG VD + IS A G+E I F+ +G+ I FR R
Sbjct: 95 AQHFSVIKDTFESLCAIVLRPEMSGLVDPDHGIS-LAAGKEEIRFR-NGSRIFFRARERG 152
Query: 155 GGLG-EGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRK 213
G + LL+IDEAQ + +++ T + NP TI GTPP G F R
Sbjct: 153 ALRGVKKIALLVIDEAQHLSDSAMASMLPTQNRAYNPQTIYMGTPPGPRDNGEAFTRLRD 212
Query: 214 DCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFHLNERKIEAELGEDEIDHNIQR 273
G + + E++ D W +NPS H ++ I A L E+ + +R
Sbjct: 213 KARAGRTHSTLYVEFAADRDADPLDREQWRKANPSYPAHTSDESI-ANLWENLTGDDFRR 271
Query: 274 --LGYWPSFNQKSVISEKEWAKLKVEQVPELKSKLFVGIKFGQDGNNVSLSIAARTSENK 331
LG W I ++W + ++ + GI +++ R +
Sbjct: 272 EALGIWDEHALSRAIDRRQWEEATID-ARRPGGVMSFGIDMNPQRTRLTIGACMRYDDGT 330
Query: 332 VFVETIDCLSV-RNGTQWIINFLKSA--DIAKVVIDGASGQELLAQEMKDQGLKKPELPK 388
+E + +GT W +N + A +VIDG S L ++ + G+
Sbjct: 331 AHIELAEYRDTNHDGTMWAVNLIDKVWEQTAALVIDGQSPATALLPDLAEAGI------T 384
Query: 389 VAEIITANMMWEQGIMQE-----TICH---SDQPSLTAVVTNCEKRQIGSNGGFGYKSLY 440
V +M G +Q+ T+ H Q L R IG NG FG+
Sbjct: 385 VTVTAATDMGRACGRLQDMLRDGTLTHLPEDGQQPLWQAAAKATTRPIGKNGLFGWNRPD 444
Query: 441 DDRDISLMDSALLAHWICYTTK 462
DD DIS +++ LA TT+
Sbjct: 445 DDTDISPLNAVTLALHGAMTTR 466
>ref|NP_569740.1| putative terminase gp4 [Mycobacterium phage TM4]
gb|AAD17572.1| putative terminase gp4 [Mycobacteriophage TM4]
Length = 474
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 184/430 (42%), Gaps = 30/430 (6%)
Query: 38 GLSCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVV--YIVQLWALHKGLKIL 95
GL WQ ++ I A ++GL+ + +IPR+ GKT ++ + L ++
Sbjct: 37 GLGFDLWQDDLGKLICAKRDDGLYAADMFAMSIPRQTGKTYLLGALVFALCIKTPNTTVI 96
Query: 96 HTAHRISTSHASFEKVKKYLEMSGYVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNG 155
TAHR T+ +F ++ L + + G+E + FK +G+ I F R
Sbjct: 97 WTAHRTRTAAETFRSMQG-LAKRDKIAPHILNVHTGNGKEAVLFK-NGSRILFGARERGF 154
Query: 156 GLG-EGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKD 214
G G G D+LI DEAQ T + + NP+ ++ GTPP G VF R D
Sbjct: 155 GRGFAGVDVLIFDEAQILTENAMDDMVPATNAAPNPLILLAGTPPKPTDPGEVFTVMRLD 214
Query: 215 CLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFHLNERKI---EAELGEDEIDHNI 271
L G+ G+ E S E +D S W NPS + R I LG++
Sbjct: 215 ALAGDVDDVGYVEISADEDADPDDRSQWRKMNPSYPHRTSARAILRMRKALGDESFKR-- 272
Query: 272 QRLGYWPSFN-QKSVISEKEWAKLKVEQVP---ELKSKLFVGIKFGQDGNNVSLSIAA-- 325
+ +G WP + + V+ W L + P E + L V + G +++S+ A
Sbjct: 273 EAMGIWPKVSVHQPVVKSGRWHDL-FDLGPEDGEAPNALAVDMSHG-----LAISVGACW 326
Query: 326 -RTSENKVFVETIDCLSVRNGTQWIINFLKSADIAKVVIDGASGQELLAQEMKDQGLKKP 384
+ + E WI ++ V+ID S LA E+K + +K
Sbjct: 327 LMDDDGRHVEEVWAGTDTAAAVDWIAE--RAGRRIPVLIDSMSPAAALAPELKARKVKV- 383
Query: 385 ELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEKRQIGSNGGFGYKSLYDDRD 444
+L A++ ++E G+ +T+ H DQP+L + KR I GG+G +D RD
Sbjct: 384 KLTGAADMAKGCGLFENGVNADTLTHGDQPALNDALAGARKRPIRDAGGWG----WDRRD 439
Query: 445 ISLMDSALLA 454
+ + L+A
Sbjct: 440 PTCVIHPLVA 449
>ref|YP_655519.1| gp2 [Mycobacterium phage Halo]
gb|ABE67259.1| terminase [Mycobacterium phage Halo]
gb|ACB58161.1| hypothetical protein BPs1_2 [Mycobacterium phage BPs]
Length = 478
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 198/449 (44%), Gaps = 30/449 (6%)
Query: 35 KKTGLSCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVV--YIVQLWALHKGL 92
K G + WQ + I+A+D GL+ +IPR+ GKT ++ + L L GL
Sbjct: 32 KNIGWTFDRWQDGLGRLILALDGTGLYAADTSVISIPRQVGKTYLIGCIVFALALLTPGL 91
Query: 93 KILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFISNKAKGQERIEFKASGAVIQFRTRT 152
++ TAHR T+ +F +K + + V+ + A+G E I + +G+ I F R
Sbjct: 92 TVIWTAHRTKTAKETFGSMKA-MCATPLVNAHVRNVSDARGDEGI-YLHNGSRILFGARE 149
Query: 153 SNGGLG-EGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPPTMVSTGTVFEAY 211
+ GLG G +L++DEAQ T + L T+ +NP+ ++ GTPP +G VF
Sbjct: 150 NGFGLGFAGVGILVLDEAQRLTDKAMDDLIPTMNTVENPLILLTGTPPRPTDSGEVFTML 209
Query: 212 RKDCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFHLNERKIEAELGEDEIDHNI 271
R+D L G + + E+S E +D + +NPS +ER I + ++ + +
Sbjct: 210 RQDALDGESEGTLYVEFSADEGAHPDDRAQLRKANPSYPHRTSERAIR-RMRKNLTEESF 268
Query: 272 QR--LGYWPSFNQKSVISEKEWAKLKVEQVPELKSKLFVGIKFGQDGNNVSLSIAARTSE 329
R G W + V++ W +L+ + G+K +G V +S + S
Sbjct: 269 LREAFGIWDKVVHRPVVTAARWRRLE-------STGPAAGVK--PNGFGVDMSHSRMVSV 319
Query: 330 NKVFVETIDCLS--------VRNGTQWIINFLKSADIAK-VVIDGASGQELLAQEMKDQG 380
N V+++ + WI + K A VVID S L ++++ G
Sbjct: 320 NAVWLDGDQAHTEEVWAGDDTDAAVAWIADAWKRAGRRTVVVIDSESPAASLVVDLENAG 379
Query: 381 LKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLT-AVVTNCEKRQIGSNGGFGYKSL 439
+ + A + A E + T+ H Q S+T AVV N ++R I GG+G+
Sbjct: 380 VNV-YVTSAANMAAACGAVENRLKAGTLTHGGQMSVTDAVVKNGKRRPIRGAGGWGWDRR 438
Query: 440 YDDRDISLMDSALLAHWICYTTKPKRKQR 468
I + LA + TK KR R
Sbjct: 439 NPSSQIHQAVAMTLA--LYGATKHKRATR 465
>ref|NP_737451.1| putative phage associated protein [Corynebacterium efficiens
YS-314]
dbj|BAC17651.1| putative phage associated protein [Corynebacterium efficiens
YS-314]
Length = 528
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 201/491 (40%), Gaps = 42/491 (8%)
Query: 4 KTKTKLGNQRPTQSVNLHFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVH 63
K T G Q P V E + ++ G S PWQ +I I G WVH
Sbjct: 3 KWPTLTGRQEPEILVMADGDDREGREVVELGRRAGSSLLPWQCGNVIGISLKTPAGTWVH 62
Query: 64 QKYGYAIPRRNGKTEV-VYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVD 122
Q +PR+NGK+E+ V I+ + IL+TAH ++ E++ K +EM +
Sbjct: 63 QTCILIVPRQNGKSEILVDIILHRVFVQDETILYTAHEWKSAQPIAERLIKMIEMRPSLA 122
Query: 123 GEDFISNKAKGQERIEFKA----------------SGAVIQFRTRTSNGGLG-EGFDLLI 165
++G+ +I K +G V+ FRTR+ G G + D LI
Sbjct: 123 KRVKKILNSQGEAKIILKGPRDPKRPKLDSKGNPKAGQVV-FRTRSPKAGRGLDEVDTLI 181
Query: 166 IDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPPTMVST----GTVFEAYRKDCLKGNKR 221
DEA + T ++ +++ T + +P I + S G + R L G
Sbjct: 182 YDEAFDTTDDEVASIGPTQDVAKDPQVIYASSAVDKESAAHQNGVQLSSLRNLALSGEDP 241
Query: 222 YSGWAEWSVPEMVKIND-VSSWYISNPSMGFHLNERKIE-------AELGEDEIDHNIQR 273
AE+ PE D V +W +SNPS G NERKI+ + G+ D
Sbjct: 242 GIYLAEYRAPENHPGRDNVKTWKLSNPSFGVLKNERKIKNLMRNMNSPRGQKSFDVEALG 301
Query: 274 LGYWPSFNQ-----KSVISEKEWAKLKVEQVPELKSKLFVGIKFGQDG-NNVSLSIAART 327
+G + FNQ VI +A+L+ Q + + + F D + + A
Sbjct: 302 IGDYFEFNQLTDDDLLVIDLDRFAELRDPQA-VATGESCLAVDFSNDRVDRTAAVAVAVR 360
Query: 328 SENKVF--VETIDCLSVRNGTQWIINFLKSADIAKVVIDGASGQELLAQEMKDQGLKKPE 385
+ N++ V + +I+ ++ D VVID S + L + ++ +G+ +PE
Sbjct: 361 AGNRIHGQVGYHGPAHIPTLVDFIVQAVEHNDPLAVVIDPKSAAQALIRPLQKKGI-EPE 419
Query: 386 LPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEKRQIGSNGGFGYKSLYDDRDI 445
L + +++ Q I T H + P + + R+IG +GG + D DI
Sbjct: 420 LMTASRVVSGTNGLLQHIDDGTFSHDNDPRVADAIAVARLREIG-DGGIAWTRRKSDGDI 478
Query: 446 SLMDSALLAHW 456
+ + S A W
Sbjct: 479 TTLVSLTNAVW 489
>ref|YP_061505.1| phage-related terminase [Leifsonia xyli subsp. xyli str. CTCB07]
gb|AAT88400.1| phage-related terminase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 361
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 133/312 (42%), Gaps = 26/312 (8%)
Query: 44 WQVNMLIPIMAIDENGLWVHQKYG--YAIPRRNGKTEVVY---IVQLWALHKGLKILHTA 98
WQ I+A NG + G +IPR+ KT +V IV L + L +L TA
Sbjct: 49 WQQGASKLILAKRANGDYAATIGGITLSIPRQVAKTYMVSRINIVALCTIFPNLTVLWTA 108
Query: 99 HRISTSHASFEKVKKYLEMSGYVDGEDFISN--KAKGQERIEFKASGAVIQFRTRTSNGG 156
HR TS +F ++ ++ G F+ N G++ IEF +G+VI F R G
Sbjct: 109 HRTRTSTKTFASLRGFV---GRKSVAPFVRNVRAVNGEQEIEF-TNGSVIMFGAREQ--G 162
Query: 157 LGEGFD---LLIIDEAQEYTSEQESALKYTVTDSDNP---MTIMCGTPPTMVSTGTVFEA 210
G GFD + + DEAQ T + + S P + GTPP V G F+
Sbjct: 163 FGRGFDEVDIEVFDEAQILTEKALEDMVAATNQSRFPAGALLFFMGTPPRPVDPGEAFKQ 222
Query: 211 YRKDCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFHLNER---KIEAELGEDEI 267
R++ L G + + E S +D W I+NPS + ++ L DE
Sbjct: 223 RRREALLGGSDDAVYIECSADTDADPDDREQWEIANPSYPHRTPLKSMLRLRKNLPSDE- 281
Query: 268 DHNIQRLGYWPSFNQKS-VISEKEWAKLKVEQVPELKSKLFVGIKFGQDGNNVSLSIAAR 326
+ LG W + S IS WA L E +P+ G+ F QDG +SL A +
Sbjct: 282 SWKREALGIWDTDQVGSRFISASRWADL--EGIPDPDESPAYGVAFSQDGMRMSLGGAFK 339
Query: 327 TSENKVFVETID 338
V VE +D
Sbjct: 340 GESETVHVELLD 351
>ref|NP_817883.1| gp32 [Mycobacterium phage Corndog]
gb|AAN01964.1| gp32 [Mycobacteriophage Corndog]
Length = 503
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 185/434 (42%), Gaps = 30/434 (6%)
Query: 35 KKTGLSCYPWQVNMLIPIMAIDENGLWVHQ--KYGYAIPRRNGKTEVVYIVQLWAL---H 89
++ GLS WQ + ++A +G+ H +G +IPR+ GKT + V L+ L +
Sbjct: 67 ERLGLSLDRWQDGIAGLLLAYRPDGVLAHTVGGFGVSIPRQCGKTHTLTAV-LFGLCVEY 125
Query: 90 KGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFIS--NKAKGQERIEFKASGAVIQ 147
G+ + T+H + T+ +F+ V+ Y + FI G E +EF A+G+ I
Sbjct: 126 PGVLAIWTSHHVKTNTETFQAVQAYAKRERVAP---FIRKVTLGSGDEAVEF-ANGSRIL 181
Query: 148 FRTRTSNGGLG-EGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPPTMVSTGT 206
F R G G G D+L+ DEAQ T + T+ S + I GTPP
Sbjct: 182 FGARERGFGRGIPGVDVLMSDEAQILTQRAMQDMLATLNTSRLGLHIYVGTPPKPTDNSE 241
Query: 207 VFEAYRKDCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFH---LNERKIEAELG 263
+F R++ G W E + ++D+ W +NPS ++ +++ L
Sbjct: 242 MFSVMRREAETGEATDIVWIECGAEDTGDLDDIEQWMNANPSCPHRTPVVSIQRLRRRLD 301
Query: 264 EDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVPELKSKLFVGIKFGQDGNNVSLSI 323
+D + LG W + ++ S W+ L V + ++ + + D + + +
Sbjct: 302 DDGFRR--EALGIWDA-SESSSFDLAAWSDLGDRGV-DAPTRAALVLDMSPDRRHCWIGV 357
Query: 324 AARTSEN---KVFVETIDCLSVRNGTQWIINFLKSADIAKVVIDGASGQELLAQEMKDQG 380
A + KV + ++ + + + + DI V I + + L + +
Sbjct: 358 AGDVDTDDGEKVLLMAMETTAA-TAVEKVRQLVNERDIVDVAITNGAARA-LEPALVEAA 415
Query: 381 LKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEKRQIGSNGGFGYKSLY 440
++ L + A++ A ++GI +++CH DQ L + R + S G ++
Sbjct: 416 IEYQRLSQ-ADVAAAYSTLQEGIKNKSVCHLDQAELNNAMMMTRTRFMTS----GESEVF 470
Query: 441 DDRDISLMDSALLA 454
D R+ S+ S +A
Sbjct: 471 DRRNYSVNLSPAVA 484
>ref|YP_001552334.1| gp5 [Mycobacterium phage Giles]
gb|ABW88400.1| gp5 [Mycobacterium phage Giles]
Length = 544
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 185/469 (39%), Gaps = 68/469 (14%)
Query: 40 SCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVVYIVQLWAL-HKGLKILHTA 98
+ + WQ + IMA +GLW H IPR+NGKT+++ + ++ L G KI++TA
Sbjct: 74 ALFGWQWDAARKIMATRPDGLWAHPDVCLIIPRQNGKTQLIALRIIYGLFFLGEKIVYTA 133
Query: 99 HRISTSHASFEKV-----------KKYLEMSGYVDGEDFISNKAKGQERIEFKASGAVIQ 147
R T ++++ ++ M G DG GQ + +G +
Sbjct: 134 QRWQTVKDVYDRIVEIIKRRPSLLRRLKPMPGVPDG-----YSEAGQHGEIYTTNGGSLD 188
Query: 148 FRTRTSNGGLGEG-FDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPPTMVSTGT 206
RT G G+ DL I DEA + L + NP TI +ST
Sbjct: 189 MGPRTKAVGRGQTKIDLAIFDEAYDIKDVLVGGLTGAQKAATNPQTI-------YISTAA 241
Query: 207 VFEAYRKDC--LKGNKR---------YSGWAEWSVPEMVKINDVSSWYISNPSMGFHLNE 255
V + DC L G +R Y+ AEW P + +D +W ++ PS G + E
Sbjct: 242 VASEH-PDCGVLAGMRRNGQRKEPDLYA--AEWCAPPGMARDDPEAWRLACPSFGITVRE 298
Query: 256 RKIEAELGEDEIDHNIQRL--------GYWPSF--NQKSVISEKEWAKLKVEQVPELKSK 305
R + E + + + G WP N + +I W L V Q P L
Sbjct: 299 RDLAREYRMARANARLLAIYDADYLGWGEWPPDPENTEPIIDPDWWEALTVLQ-PALVGD 357
Query: 306 LFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNG--TQWIINFLKSADIAKVVI 363
+ + I+ D ++ RT + +V VE + G ++ ++ + A +++
Sbjct: 358 ICIAIERTLDTRYWCIAAGQRTIDGRVHVEVGYWRAANIGVVAAALLELVELWNPAAIIV 417
Query: 364 DGASGQELLAQEMKDQG--LKKPELPKVAEIITANMMWEQGIMQET----ICHSDQPSLT 417
D S + + M +QG ++ PK+A M+ QG + + H Q +T
Sbjct: 418 DDRSKAKPIVGVMFNQGIEIETASTPKLA-------MYTQGFIDAVNAADVTHIGQKIIT 470
Query: 418 AVVTNCEKRQIGSNGGFGYKSLYDDRDISLMDSALLAHWIC--YTTKPK 464
+ R++ G + ++ + + LAH Y +PK
Sbjct: 471 DGIAGAAMREL-PRGDLVFDEKESGAPVAPLKAIALAHGAVLEYAAEPK 518
>ref|YP_655891.1| gp26 [Mycobacterium phage Wildcat]
gb|ABE67631.1| gp26 [Mycobacteriophage Wildcat]
Length = 537
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 167/404 (41%), Gaps = 44/404 (10%)
Query: 8 KLGNQRPTQSVNL--HFAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQK 65
+ G QRP + + SL +A+ + + G PWQ +L ++ +D G W +
Sbjct: 26 RYGYQRPPEGHCFIPPYTTSLGDKAMWFLHQVGFELDPWQEFVLRNMLNLDAQGHWAASE 85
Query: 66 YGYAIPRRNGKTEVVYIVQLWALHKGLKIL--HTAHRISTSHASFEKVKKYLE------- 116
+PR+NGKT ++ +L L+ L HTA + + SF ++K +E
Sbjct: 86 ALLLVPRQNGKTAIIEARELVGLYVVCDKLCIHTAVLFNAARESFYRLKARIENNETLNK 145
Query: 117 MSGYVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQ 176
++ + G D +S + K ++ +G + + R + G D++++DEA
Sbjct: 146 ITRFRSGNDNMSIEVKPKKESRHPNAGGRVIYMARGTAVARGFSADVIVLDEAFALDEAS 205
Query: 177 ESALKYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSGWAEWSVPEMVKI 236
+A+ Y + NP I + T + T E ++ + + EW +
Sbjct: 206 IAAIDYATSARANPFIIYASS--TGLEDSTELEKLHDRGMRQDPDML-FMEWCATTR-DL 261
Query: 237 NDVSSWYISNPSMGFHLNERKIEAELGE-DEIDHNIQRLGYWPSFNQKSVISEKEWAKL- 294
+D ++Y SNP++G+ ++ +I E + +RLG W +VI +W L
Sbjct: 262 DDEENYYRSNPALGYRISIERIRKERNRHSDKTFGRERLGLWNDNAFNAVIPADQWKSLC 321
Query: 295 ----------KVEQVPELKSKL----FVGIKFGQDGNNVSLSIAARTSENKVFVETIDCL 340
+VE S++ V I D + ++S A + + +V I+ L
Sbjct: 322 LCHGTVHDEHRVEGAEAGWSRIVTPTVVAIDSAPDSSLTTISWAGKNQDGQV---QIEIL 378
Query: 341 SVRNGTQWIINFLK----------SADIAKVVIDGASGQELLAQ 374
+G W + F+ +A VV GA+ +L+ +
Sbjct: 379 QEASGVGWAVEFVAMLYDPQRVETPPPLAVVVQAGATAGQLIPE 422
>ref|NP_818312.1| gp11 [Mycobacterium phage Omega]
gb|AAN12655.1| gp11 [Mycobacterium phage Omega]
Length = 850
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 157/408 (38%), Gaps = 71/408 (17%)
Query: 102 STSHASFEKVKKYLEMSGYVDGEDFISNKAKGQERIEF---KASGAVIQFRTRTSNGGLG 158
+T+ E+++ + SG + + +A G E IE GA + F+TRT GLG
Sbjct: 446 NTAVNGMERLESLIAKSGL----KYKAKQAHGAESIEILDGPNPGARVMFQTRTDRSGLG 501
Query: 159 EGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTP------PTMVSTGTVFEAYR 212
D +I DEA T AL TV+ NP + GT P + G V
Sbjct: 502 LTADRVIFDEAMTITPGSLKALLPTVSSRPNPQIVYTGTAADQRTQPYCHTFGGVRYRAL 561
Query: 213 KDCLKGNKRYSGWAEWSVPEMV---KINDVSSWYISNPSMGFHLNERKIEAELGE---DE 266
+ G ++ + EWS P+ + K D W ++NP +G+ E KI E E +
Sbjct: 562 EQLRTGERKRLCFLEWSAPDDLPEEKFGDPQYWAMANPGLGYRQTEEKILDEYEEMWANL 621
Query: 267 IDHNIQRLGY--WPSFN-QKSVISEKEWAKLK-------------VEQVPELKSKLFVGI 310
D + RLG WP F + S I +W +L + + PE VG
Sbjct: 622 RDFGVDRLGIGDWPQFGAEMSEIPLDKWRRLNNPSPDLAGARALILYRTPEGGPWAIVGS 681
Query: 311 KFGQDGN-NVSLSIAARTSENKV---FVETI------DCLSVRNGTQWIINFLKSADIAK 360
+ DG +V + A ++V F++ I + L R G +I +++A
Sbjct: 682 QRCTDGRIHVEVGYAGTDPVDRVVDKFIQAITAWGPEEILVGRGGAAEVIPQIEAAGFTV 741
Query: 361 VVIDGASGQELLAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVV 420
+ + + + D L PE P + H DQ SL A +
Sbjct: 742 YSPNQSEEAQACGGFLND-ALVDPENP-------------------LLSHGDQHSLNAAI 781
Query: 421 TNCEKRQIGSNGGFGYKSLYDDRDISLMDS-----ALLAHWICYTTKP 463
T KR + S GGF + + LM ALL H I P
Sbjct: 782 TRAVKRDLPS-GGFVWDCIEPSTYAQLMGVTLGRWALLKHAINAKPTP 828
>ref|YP_001456732.1| gp2, terminase [Corynebacterium phage BFK20]
emb|CAB93907.2| gp2, terminase [Corynebacterium phage BFK20]
Length = 542
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 157/375 (41%), Gaps = 48/375 (12%)
Query: 25 SLAHEAINYYKKT-GLSCYPWQVNMLIPIMAIDENGLWVHQKYG---YAIPRRNGKTEVV 80
SL E I++ ++ G+ PWQ I + +D + ++ + R+NGKT V+
Sbjct: 28 SLGFEVIDFAREILGIELRPWQEWFFIHALELDPEKNYEDFRFRQLVLLVGRQNGKTLVM 87
Query: 81 YIVQLWALHKG--LKILHTAHRISTSHAS----FEKVKKYLEMSGYVD-----GEDF-IS 128
I+ LW L +I+ A +S + A+ F K +++ ++ GE
Sbjct: 88 VILGLWKLFIDGCSEIVTAAQDLSVAEATLSNAFMLAKANPDLNQWLPWRMERGEMVPFM 147
Query: 129 NKAKGQERIEFKAS---------GAVIQFRTRTSN--GGLGEGFDLLIIDEAQEYTSEQE 177
A G +IE + GA+ ++ +N GG +L ++DE +E+T Q
Sbjct: 148 RTANGSNQIELAYAPVPEALDVFGAMPKWFVVATNRGGGRSHSAELAMLDELREHTDFQ- 206
Query: 178 SALKYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLK----GNKRYSGWA--EWSVP 231
S T ++ P + G V R CLK G S A EWS P
Sbjct: 207 SWGAITPAVAERPRNQVYGFSNAGDEKSVVLRKQRNICLKEISDGITDQSQLAIFEWSAP 266
Query: 232 EMVKINDVSSWYISNPSMGFHLNERKIEAELG-------EDEIDHNIQRLGY---WPSFN 281
E I D W +NPS+G+ + K L +DE D N+ R+ Y W
Sbjct: 267 EECSIFDRDGWAAANPSLGYGNRDEKTMLSLARAALDPEDDEADENLFRIEYLCQWVKTL 326
Query: 282 QKSVISEKEWAKLK-VEQVPELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCL 340
++ + W LK + + + + V + DG + S++IA+ + V +ET+
Sbjct: 327 EQGKVKRDTWDALKDSDSRRDEDAPIEVAVDVDVDGRSTSITIASYREDGHVHLETV--- 383
Query: 341 SVRNGTQWIINFLKS 355
+ R G W+ +L++
Sbjct: 384 AHRTGYHWVTEWLRA 398
>ref|YP_063142.1| phage-related terminase [Leifsonia xyli subsp. xyli str. CTCB07]
gb|AAT90037.1| phage-related terminase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 467
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 158/396 (39%), Gaps = 37/396 (9%)
Query: 94 ILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFISNKAKGQERIEFKASGAVIQFRTRTS 153
++ +AH T+ +F ++ + S +D A G E IE K G+ ++F+ RTS
Sbjct: 75 VIWSAHEFGTAQEAFRDMQALIASSPDLDRRVRKIRTAAGSESIEMK-DGSRLRFKARTS 133
Query: 154 NGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTPPTMVSTGTVFEAYRK 213
GG G +I+DEA + AL T+ +P + + + +G + +
Sbjct: 134 GGGRGLTGSKVILDEAFALDAAMMGALLPTLISVPDPQVVYASS-AGLAKSGILRGVRDR 192
Query: 214 DCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFH----------LNERK------ 257
C G G+AEW + + V + + P ++ RK
Sbjct: 193 GC--GGVDRMGYAEWLAQKRECASKVCNHAVGTPGCALDDKVLWRKACPISARKDPEQMQ 250
Query: 258 ----IEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVPELKSKLFVGIKFG 313
+ L DE LG+W S+I E W L VE ++ + +
Sbjct: 251 AIANLRMALPPDEFMREC--LGWWDEPLGDSIIGEGLWRSLLVEDSTIDRAAFALDVSPE 308
Query: 314 QDGNNVSLSIAARTSENKVFVETID---CLSVRNGTQWIINFLK--SADIAKVVIDGASG 368
+D S+ +A ++ +E L R GT W+ + L SAD + ++ A+G
Sbjct: 309 RDW--ASIVVAGVNQYGRIHIEITSRDGVLDHRTGTGWVKDRLAQISADRGGLAVNIAAG 366
Query: 369 QEL--LAQEMKDQGLKKPELPKVAEIITANMMWEQGIMQETICHSDQPSLTAVVTNCEKR 426
LA +++ G++ + ++++A + + E + H Q LT V K+
Sbjct: 367 SAAKSLAPDLEATGVRVERI-AARDVVSACGRFYDLAIDEQLSHLVQDDLTNAVIGARKK 425
Query: 427 QIGSNGGFGYKSLYDDRDISLMDSALLAHWICYTTK 462
+G F + DI+ + +A LA W T++
Sbjct: 426 NLGER-AFMWVRSGSVGDITPLYAATLAVWAADTSR 460
>ref|YP_001538502.1| phage-related terminase [Salinispora arenicola CNS-205]
ref|YP_001538553.1| phage-related terminase [Salinispora arenicola CNS-205]
gb|ABV99511.1| phage-related terminase [Salinispora arenicola CNS-205]
gb|ABV99562.1| phage-related terminase [Salinispora arenicola CNS-205]
Length = 495
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 187/496 (37%), Gaps = 80/496 (16%)
Query: 23 AKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGK---TEV 79
A S EA++ G+ Q ++ +A +G W+ + PR+NGK EV
Sbjct: 6 AGSWGPEAVDLAATVGVRLDEGQAAIIHDGLARGADGKWLASEVADLEPRQNGKGVDLEV 65
Query: 80 VYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFISNKAKG------ 133
+ L + + L I+ TAH T+H F + M GY D D + + +
Sbjct: 66 RALAGLLLVKEPL-IVWTAHEFKTAHQGF------VRMRGYFDNFDHLRKRVRTIRSSTH 118
Query: 134 QERIEFKASGAVIQFRTRTSNGGLG-EGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMT 192
I K +G + F R+ G G G L +DEA T+EQ +A+ Y + + NP
Sbjct: 119 STEIILK-TGQTLAFLARSGGSGRGFAGVSPLFLDEAFALTAEQVAAIVYATSAAANPQV 177
Query: 193 IMCGTPPTMVSTGTVFEAYRKDCLKGNKRYSG--WAEWSVP-------EMVKINDVSSWY 243
+ P S E R+ +G + G + EWS +V+ N S
Sbjct: 178 WYMSSAPLGGS-----EVLREVVTRGRRGTRGLVYYEWSASGRYDDLFTLVEANKALSDE 232
Query: 244 ISNPSMGFHLNERKIEA----------ELGEDEIDHNI----------QRLGYWPSFNQK 283
+ + G L R A + E I + +RLG +
Sbjct: 233 AEDTTEGRALRGRLFAAVAEANRAFGVRIFESSILREVRATGVAQFLRERLGVYSELETG 292
Query: 284 SVISEKEWAKLKVEQVPELKSK--LFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLS 341
+ I + W +L PE + + + + + + + ++ + ++ ++ +
Sbjct: 293 AAIDQATWRQLA---DPESRREGVVAIAVDIAPERDWAAIGLYGHRADGLGHLQLVYYGP 349
Query: 342 VRNGTQWIINFLKSADIAKVVIDGASGQEL-LAQEMKDQGLKKPE------LPKVAEIIT 394
V I F + D V + A G L ++++ +G+++PE P+ +++
Sbjct: 350 VAGLVDKIAEFRSALD--PVAVGMARGTHASLREDLRARGIERPEDRDEDKEPRRGDLVV 407
Query: 395 ---ANMMWEQGIMQETICHSD-----QPSLTAVVTNCEKRQIGSNGGFGYKSLYDDR--D 444
A+M G M + +D L A V + R+ G + + DR D
Sbjct: 408 LGGADMAAACGQMLDATRQADLRYVPAAQLDAAVATAKTRRTGDAVAWARQ----DRAVD 463
Query: 445 ISLMDSALLAHWICYT 460
I+ + + A W Y
Sbjct: 464 ITGLVAVTEARWAYYA 479
>ref|YP_001294797.1| probable terminase [Microbacterium phage Min1]
gb|ABR10467.1| probable terminase [Microbacterium phage Min1]
Length = 530
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 137/351 (39%), Gaps = 44/351 (12%)
Query: 39 LSCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVVYIVQLWALH--------- 89
+ +PWQ +LI ++ +D G +K + R+NGKT + ++ + L+
Sbjct: 39 VCLFPWQKWLLIHMLELDAFGRLRFRKALVIVGRQNGKTLIAAVLAAYWLYVDAGRWPDQ 98
Query: 90 ---KGLKILHTAHRISTSHASFEKVKKY---------LEMSGYVDGEDFISNKAKGQERI 137
+ ++ A ++ + + +V+++ + D + F
Sbjct: 99 LPEQDFIVVGAAQKLDIAMKPWRQVRRWGAPDDPKVGIARDRVPDLQAFTYPPRTTNGET 158
Query: 138 EFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQE-YTSEQESALKYTVTDSDNPMTIMCG 196
E + G + RT G G+ LI+DE +E Y E SA++ + + + +
Sbjct: 159 ELRTHGGA-AYLPRTFEGARGQSAARLILDELREQYDYEGWSAIEKSANAMFDSLLVAFS 217
Query: 197 TPPTMVSTGTVFEAYRKDCLKG-NKRYSGW--AEWSVPEMVKINDVSSWYISNPSMGFHL 253
T S V R+ +G + R + W AEWS ++D ++ +NPS G+
Sbjct: 218 NAGTKRSR--VLRDVRQIGHEGVDDRETQWFIAEWSAEPDASLDDERAFAQANPSAGYLA 275
Query: 254 NER-----KIEAELGEDEIDHNIQRLGYWPSFNQKSVISEKEWAKLKVEQVPELKSKLFV 308
+ AE E ++ I+ LG W + + I +EW K + V + +++
Sbjct: 276 GMTIAGLMRAAAEAKEKNVER-IEVLGQWVTAKVDNFIDSEEW-KSRHRDVASIFARIPN 333
Query: 309 G------IKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRNGTQWIINFL 353
G I D L+ A T + FV R G W++ L
Sbjct: 334 GARTVWAIDMSHDRRTTWLAAAVLTEDGNPFVT---VRVKRTGWAWVVPTL 381
>emb|CAI44887.1| putative terminase ATPase subunit [Human herpesvirus 3]
gb|ABF21689.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF21762.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF21835.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABJ98890.1| ORF45/42 [Human herpesvirus 3]
Length = 747
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEM---SGYVD 122
+ +PRR+GKT V I + A +G+K+ +TAH + FE +K LE + YVD
Sbjct: 265 FLVPRRHGKTWFLVPLIALVMATFRGIKVGYTAHIRKATEPVFEGIKSRLEQWFGANYVD 324
Query: 123 ---GEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
GE + G AS + +NG G+ F+LL +DEA
Sbjct: 325 HVKGESITFSFTDGSYSTAVFAS-------SHNTNGIRGQDFNLLFVDEA 367
>ref|NP_040165.1| DNA packaging terminase subunit 1 [Human herpesvirus 3]
sp|P09294|VTER_VZVD Probable DNA packaging protein [Contains: Gene 42 protein]
emb|CAB55553.1| putative ATPase subunit of terminase [Human herpesvirus 3 (strain
Dumas)]
gb|AAT07724.1| DNA packaging protein [Human herpesvirus 3]
gb|AAT07800.1| DNA packaging protein [Human herpesvirus 3]
gb|ABF21543.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF21616.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF21908.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF21981.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF22054.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF22127.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF22200.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABF22273.1| putative ATPase subunit of terminase [Human herpesvirus 3]
Length = 747
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEM---SGYVD 122
+ +PRR+GKT V I + A +G+K+ +TAH + FE +K LE + YVD
Sbjct: 265 FLVPRRHGKTWFLVPLIALVMATFRGIKVGYTAHIRKATEPVFEGIKSRLEQWFGANYVD 324
Query: 123 ---GEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
GE + G AS + +NG G+ F+LL +DEA
Sbjct: 325 HVKGESITFSFTDGSYSTAVFAS-------SHNTNGIRGQDFNLLFVDEA 367
>gb|ABH08471.1| putative terminase ATPase subunit [Human herpesvirus 3]
gb|ABW06896.1| DNA packaging protein [Human herpesvirus 3]
Length = 743
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEM---SGYVD 122
+ +PRR+GKT V I + A +G+K+ +TAH + FE +K LE + YVD
Sbjct: 261 FLVPRRHGKTWFLVPLIALVMATFRGIKVGYTAHIRKATEPVFEGIKSRLEQWFGANYVD 320
Query: 123 ---GEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
GE + G AS + +NG G+ F+LL +DEA
Sbjct: 321 HVKGESITFSFTDGSYSTAVFAS-------SHNTNGIRGQDFNLLFVDEA 363
>ref|NP_817679.1| gp2 [Mycobacterium phage Che9c]
gb|AAN12562.1| gp2 [Mycobacterium phage Che9c]
Length = 515
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 141/371 (38%), Gaps = 41/371 (11%)
Query: 22 FAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKTEVVY 81
++++ E + G P Q L + ID NG ++ R+N KT
Sbjct: 15 YSETYGPEVADLCDLAGFPPDPEQELGLNALFGIDSNGRSTAFEFVVIAARQNLKTGFEK 74
Query: 82 IVQL-WALHKGLKILH-TAHRISTSHASFEKVKKYLEMSGYV-----DGEDFISNKAKGQ 134
L W +++ +AH ++ + +F + +E + + DG + G
Sbjct: 75 QAALGWLFITEQRLISWSAHEMTPTREAFNDLVNLIESTPSLAKRLEDGPTNGVFRGAGT 134
Query: 135 ERIEFKAS-----GAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
E I K S G + F+ RT++GG G + +I+DE +L T++ +
Sbjct: 135 EAIALKPSKACPDGQRVIFKARTNSGGRGLTGNKVILDEGFALRHAHMGSLMPTLSAVPD 194
Query: 190 PMTIMCGTPPTMVSTGTVFEAY---RKDCLKGNKRYSGWAEWSVPEMVKINDVSSWYI-- 244
P ++ G+ + + + R + L KR G+ E+ PE +D Y+
Sbjct: 195 PQ-LLIGSSACHADSEVLHKLVKRGRSEELAPRKRL-GYLEFCAPENACEDDECPHYVGY 252
Query: 245 -------------SNPSMGFHLNERKIEAELGE-DEIDHNIQRLGYW--PSFNQKSVISE 288
+NP G + +E E D + +RLG+ P+ +IS+
Sbjct: 253 PGCAMDKREYIIMANPQAGRRITWEYLEGERDSLDPAEFGRERLGWHDKPAIEDAPLISK 312
Query: 289 KEWAKLKVEQVPELKSKLFVGIKFGQDGNNVSLSIAARTSENKVFVETIDCLSVRN---- 344
WA K++ + +L G+ + ++ +A + K+ V + N
Sbjct: 313 DGWAT-KMDPKSQPGPRLAFGVYVNKLQTAAAIGVAGYREDGKIHVGIVPAARGGNVATL 371
Query: 345 -GTQWIINFLK 354
G WI +K
Sbjct: 372 PGINWIPARMK 382
>ref|NP_077457.1| DNA packaging terminase subunit 1 [Cercopithecine herpesvirus 9]
gb|AAG27219.1|AF275348_40 unknown [Cercopithecine herpesvirus 9]
Length = 745
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 21/131 (16%)
Query: 50 IPIMAIDENGLWVHQKYG-YAIPRRNGKTEVVYIVQLWAL----HKGLKILHTAHRISTS 104
IPI + E L Q+ + +PRR+GKT +IV L AL +G+K+ +TAH +
Sbjct: 246 IPICS-SEIALQFKQRSTVFLVPRRHGKTW--FIVSLIALLMSTFRGIKVGYTAHIRKAT 302
Query: 105 HASFEKVKKYLEM------SGYVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLG 158
FE++K LE +V GE + + G S AV + +NG G
Sbjct: 303 EPVFEEIKARLEQWFGTERIEHVKGESITFSFSDG------CCSTAVFS-SSHNTNGIRG 355
Query: 159 EGFDLLIIDEA 169
+ F+LL +DEA
Sbjct: 356 QTFNLLFVDEA 366
>ref|NP_944422.2| DNA packaging terminase subunit 1 [Psittacid herpesvirus 1]
Length = 795
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGED 125
+ +PRR+GKT V I L + +GL+I +TAH + FE++ Y + + GED
Sbjct: 316 FLVPRRHGKTWFLVPLISLLVSCFEGLRIGYTAHLRKATKPVFEEI--YARLCRWY-GED 372
Query: 126 FISNKAKGQERIEFK----ASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
+ ++ KG E I F A +++ ++ +NG G+ F+ L +DEA
Sbjct: 373 RV-HQIKG-ETIAFSFKNGARSSIVFASSQNTNGLRGQDFNFLFVDEA 418
>ref|YP_850658.1| helicase family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
emb|CAK21879.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 439
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 74 NGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLE----MSGYVDGEDFISN 129
+GKTE+++ WAL +G +I + R+ + ++K+ + Y D ED
Sbjct: 124 SGKTEMMFEGMDWALRQGFRICLASPRVDVCLELYPRLKEVFPSKNMVCLYGDSED---- 179
Query: 130 KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
K +G++ + + +I+F E F+++ IDE + ++ L Y V +
Sbjct: 180 KYQGEQFV-LATTHQLIRFY---------EAFEVIFIDEVDAFPYAKDPFLNYAVEKARK 229
Query: 190 PMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
GT T+V T T + ++++C G +R+
Sbjct: 230 KE----GT--TIVITATPEQKWQEECTSGKRRF 256
>ref|NP_045342.1| DNA packaging terminase subunit 1 [Bovine herpesvirus 1]
emb|CAA88116.1| unnamed protein product [Bovine herpesvirus 1]
emb|CAA06117.1| UL15 protein [Bovine herpesvirus type 1.1]
Length = 735
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGED 125
+ +PRR+GKT V I A KG+KI +TAH + FE++ L + GE
Sbjct: 254 FLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATEPVFEEIVARLRQ--WFGGER 311
Query: 126 FISNKAKGQERIEFK----ASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
+ KG E I F A ++ + +NG G+ F+LL +DEA
Sbjct: 312 V--DHVKG-EVISFSFPDGARSTIVFASSHNTNGIRGQDFNLLFVDEA 356
>ref|NP_954931.1| DNA packaging terminase subunit 1 [Bovine herpesvirus 5]
gb|AAR86145.1| UL15 DNA cleavage, packaging protein [Bovine herpesvirus 5]
Length = 737
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYL------EMSG 119
+ +PRR+GKT V I A KG+KI +TAH + FE++ L E
Sbjct: 256 FLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATEPVFEEIVARLRQWFGSERVD 315
Query: 120 YVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
+V GE + G A ++ + +NG G+ F+LL +DEA
Sbjct: 316 HVKGEVISFSFPDG-------ARSTIVFASSHNTNGIRGQDFNLLFVDEA 358
>ref|YP_001548152.1| protein of unknown function DUF264 [Methanococcus maripaludis C6]
gb|ABX00920.1| protein of unknown function DUF264 [Methanococcus maripaludis C6]
Length = 505
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 70 IPRRNGKTEVVYIV--QLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFI 127
I RR GKTEV+ V + + ++G +L A + + ++K+K+ LE + + +
Sbjct: 84 IGRRGGKTEVMGGVGPKFCSKYRGFSVLVVAPVYNQAKTMYKKIKRGLESNK--ESRQLV 141
Query: 128 SNKAKGQERIEFKA----SGAVIQFRTRTSNGGL-GEGFDLLIIDEAQEYTSEQESAL 180
K +G + F +G+ I+F++ + L EG+DL+I+DEA E SA+
Sbjct: 142 KPKKEGFKESPFPLITFYNGSTIEFKSAETPDNLRSEGYDLIIVDEAAFVDDEIISAV 199
>gb|ABI63477.1| UL15 [Human herpesvirus 1]
Length = 735
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 22 FAKSLAHEAINYYKKTGLSCYPWQVNML------IPIMAIDENGLWVHQKYGYAIPRRNG 75
F K + A + L + QVN IP+ + + + + +PRR+G
Sbjct: 204 FQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDAAVCHFRQRATVFLVPRRHG 263
Query: 76 KTEVVYIVQLWAL----HKGLKILHTAHRISTSHASFEKVKKYLEM---SGYVDGEDFIS 128
KT ++V L AL +G+KI +TAH + FE++ L S VD
Sbjct: 264 KTW--FLVPLIALSLASFRGIKIGYTAHIRKATEPVFEEIDACLRGWFGSARVD------ 315
Query: 129 NKAKGQERIEFK---ASGAVIQF-RTRTSNGGLGEGFDLLIIDEA 169
KG E I F S + I F + +NG G+ F+LL +DEA
Sbjct: 316 -HVKG-ETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEA 358
>ref|NP_044616.1| DNA packaging terminase subunit 1 [Human herpesvirus 1]
sp|P04295|VTER_HHV11 Probable DNA packaging protein (Terminase)
emb|CAA32330.1| UL15 [Human herpesvirus 1]
Length = 735
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 22 FAKSLAHEAINYYKKTGLSCYPWQVNML------IPIMAIDENGLWVHQKYGYAIPRRNG 75
F K + A + L + QVN IP+ + + + + +PRR+G
Sbjct: 204 FQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDAAVRHFRQRATVFLVPRRHG 263
Query: 76 KTEVVYIVQLWAL----HKGLKILHTAHRISTSHASFEKVKKYLEM---SGYVDGEDFIS 128
KT ++V L AL +G+KI +TAH + FE++ L S VD
Sbjct: 264 KTW--FLVPLIALSLASFRGIKIGYTAHIRKATEPVFEEIDACLRGWFGSARVD------ 315
Query: 129 NKAKGQERIEFK---ASGAVIQF-RTRTSNGGLGEGFDLLIIDEA 169
KG E I F S + I F + +NG G+ F+LL +DEA
Sbjct: 316 -HVKG-ETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEA 358
>ref|NP_045262.1| DNA packaging terminase subunit 1 [Equid herpesvirus 4]
gb|AAC59564.1| 47/44 [Equine herpesvirus 4]
Length = 734
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEM------SG 119
+ +PRR+GKT V I A KG+KI +TAH + F+++ L
Sbjct: 257 FLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATEPVFDEIGARLRQWFGNSPVD 316
Query: 120 YVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
+V GE+ + G + AS + +NG G+ F+LL +DEA
Sbjct: 317 HVKGENISFSFPDGSKSTIVFAS-------SHNTNGIRGQDFNLLFVDEA 359
>ref|YP_053090.1| DNA packaging terminase subunit 1 [Equid herpesvirus 1]
sp|P28969|VTER_EHV1B Probable DNA packaging protein (Terminase)
sp|P84396|VTER_EHV1V Probable DNA packaging protein (Terminase)
gb|AAS45929.1| putative terminase [Equid herpesvirus 1]
gb|AAT67302.1| DNA packaging protein [Equid herpesvirus 1]
Length = 734
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEM------SG 119
+ +PRR+GKT V I A KG+KI +TAH + F+++ L
Sbjct: 257 FLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATEPVFDEIGARLRQWFGNSPVD 316
Query: 120 YVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
+V GE+ + G + AS + +NG G+ F+LL +DEA
Sbjct: 317 HVKGENISFSFPDGSKSTIVFAS-------SHNTNGIRGQDFNLLFVDEA 359
>ref|YP_443861.1| DNA packaging terminase subunit 1 [Cercopithecine herpesvirus 16]
gb|ABA29268.1| UL15 [Cercopithecine herpesvirus 16]
Length = 735
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 22 FAKSLAHEAINYYKKTGLSCYPWQVNML------IPIMAIDENGLWVHQKYGYAIPRRNG 75
F K + A + L + QVN IP+ + + + + +PRR+G
Sbjct: 204 FQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDAAVRHFRQRATVFLVPRRHG 263
Query: 76 KTEVVYIVQLWAL----HKGLKILHTAHRISTSHASFEKVKKYLEM---SGYVDGEDFIS 128
KT +IV L AL +G+KI +TAH + F+++ L+ S VD
Sbjct: 264 KTW--FIVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLQGWFGSSRVD------ 315
Query: 129 NKAKGQERIEFK---ASGAVIQF-RTRTSNGGLGEGFDLLIIDEA 169
KG E I F S + I F + +NG G+ F+LL +DEA
Sbjct: 316 -HVKG-ETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEA 358
>ref|NP_851874.1| DNA packaging terminase subunit 1 [Cercopithecine herpesvirus 1]
dbj|BAC58054.1| UL15 [Cercopithecine herpesvirus 1]
gb|AAP41433.1| UL15 [Cercopithecine herpesvirus 1]
Length = 738
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 21/113 (18%)
Query: 68 YAIPRRNGKTEVVYIVQLWAL----HKGLKILHTAHRISTSHASFEKVKKYLEM---SGY 120
+ +PRR+GKT +IV L AL +G+KI +TAH + F+++ L+ S
Sbjct: 255 FLVPRRHGKTW--FIVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLQGWFGSSR 312
Query: 121 VDGEDFISNKAKGQERIEFK---ASGAVIQF-RTRTSNGGLGEGFDLLIIDEA 169
VD KG E I F S + I F + +NG G+ F+LL +DEA
Sbjct: 313 VD-------HVKG-ETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEA 357
>gb|AAO38880.1| UL15 [Pseudorabies virus]
Length = 753
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEM------SG 119
+ +PRR+GKT V I A +G+++ +TAH + FE++ L
Sbjct: 286 FLVPRRHGKTWFLVPLIALALATFRGIRVGYTAHIRKATEPVFEEIHARLRRWCRDARVD 345
Query: 120 YVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
+V GE+ G A ++ + +NG G+ F+LL +DEA
Sbjct: 346 HVKGENITVTFPDG-------ARSTIVFASSHNTNGIRGQDFNLLFVDEA 388
>ref|NP_044484.1| DNA packaging terminase subunit 1 [Human herpesvirus 2]
emb|CAB06775.1| UL15 [Human herpesvirus 2]
Length = 734
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 22 FAKSLAHEAINYYKKTGLSCYPWQVNML------IPIMAIDENGLWVHQKYGYAIPRRNG 75
F K + A + L + QVN IP+ + + + + +PRR+G
Sbjct: 204 FQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHG 263
Query: 76 KTEVVYIVQLWAL----HKGLKILHTAHRISTSHASFEKVKKYLEM---SGYVDGEDFIS 128
KT ++V L AL +G+KI +TAH + F+++ L S VD
Sbjct: 264 KTW--FLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVD------ 315
Query: 129 NKAKGQERIEFK---ASGAVIQF-RTRTSNGGLGEGFDLLIIDEA 169
KG E I F S + I F + +NG G+ F+LL +DEA
Sbjct: 316 -HVKG-ETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEA 358
>ref|YP_068358.1| DNA packaging terminase subunit 1 [Suid herpesvirus 1]
tpg|DAA02178.1| TPA_exp: UL15 protein [Suid herpesvirus 1]
Length = 735
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEM------SG 119
+ +PRR+GKT V I A +G+++ +TAH + FE++ L
Sbjct: 270 FLVPRRHGKTWFLVPLIALALATFRGIRVGYTAHIRKATEPVFEEIHARLRRWCRDARVD 329
Query: 120 YVDGEDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEA 169
+V GE+ G A ++ + +NG G+ F+LL +DEA
Sbjct: 330 HVKGENITVTFPDG-------ARSTIVFASSHNTNGIRGQDFNLLFVDEA 372
>ref|YP_164457.1| DNA packaging terminase subunit 1 [Cercopithecine herpesvirus 2]
gb|AAU88080.1| UL15 [Cercopithecine herpesvirus 2]
Length = 735
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 68 YAIPRRNGKTEVVYIVQLWAL----HKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDG 123
+ +PRR+GKT +IV L AL +G+KI +TAH + F+++ L G+
Sbjct: 256 FLVPRRHGKTW--FIVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLR--GWFGA 311
Query: 124 EDFISNKAKGQERIEFK---ASGAVIQF-RTRTSNGGLGEGFDLLIIDEA 169
+ KG E I F S + I F + +NG G+ F+LL +DEA
Sbjct: 312 ARV--DHVKG-ETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEA 358
>ref|ZP_02688711.1| hypothetical protein LmonFSL_15775 [Listeria monocytogenes FSL
J2-071]
Length = 376
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Query: 74 NGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLE----MSGYVDGEDFISN 129
+GKTE+++ WAL +G +I + R+ + +++ + Y D ED
Sbjct: 61 SGKTEMMFEGMDWALRQGFRICVASPRVDVCLELYPRLQAVFPSIDMICLYGDSEDNYQG 120
Query: 130 KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
E+ + +I+F E F ++ IDE + ++ L+Y V
Sbjct: 121 -----EQFVIATTHQLIRFY---------ETFQVIFIDEVDAFPYAKDPFLEYAV----- 161
Query: 190 PMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
M T++ T T + ++++CL+G +++
Sbjct: 162 -MKARTKEGSTIIITATPEKKWQEECLEGKRKF 193
>ref|NP_785918.1| prophage Lp3 protein 15, terminase large subunit [Lactobacillus
plantarum WCFS1]
emb|CAD64769.1| prophage Lp3 protein 15, terminase large subunit [Lactobacillus
plantarum WCFS1]
Length = 567
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 214 DCLKGNKRYSGW--AEWSVPEMVKINDVSSWYISNPSMGF-HLNER---KIEAELGEDEI 267
D LKG + A W + + ++ D ++W +NP H+ +R KI+A++
Sbjct: 249 DVLKGKTEADRYFVAIWELDDREEVYDQANWIKANPLFSEPHVKQRMTEKIQADVDLAIK 308
Query: 268 DHN-----IQRLGYWPSFNQKSVISEKEWAKLKVEQVPELKSKL-FVGIKFGQDGNNVSL 321
+N ++ W ++ S IS +WA K+ +VP+L +++ ++GI + + ++
Sbjct: 309 QNNLIPILVKNFNMWLQASEDSYISADDWAAGKLAKVPDLHNRVAYIGIDLSKSNDLTAV 368
Query: 322 S 322
S
Sbjct: 369 S 369
>ref|ZP_02525767.1| lichenysin synthetase A [Bacillus cereus AH1134]
Length = 2178
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 214 DCLKGNKRYSGWAEWSVPEMVKINDVSSWYISNPSMGFHLNERKIEAELGEDEIDHNIQR 273
D + NKR +E +P N S W+I + G LN + ELGED+ + +Q
Sbjct: 1894 DVISRNKRID--SECLIPIQNGTNKDSQWFIVHGQGGGILNYYDLARELGEDKTVYGLQS 1951
Query: 274 LGYWPSFNQKSVISEKEWAKLKVEQVPELKSK---LFVGIKFGQDGNNVSLSIAARTSE- 329
+GY N+ +S +E A +E++ ++K + +G F G V+ +A + E
Sbjct: 1952 IGY--DDNRFPYLSVEEMAVRYIEEIKQVKKEGPYTLLGWSF---GGIVAFEMARKLEEI 2006
Query: 330 -NKV-FVETIDC-----------LSVRNGTQWIINFLKSADIAKVVIDGASGQELLAQEM 376
+KV F+ +D L++ N + + F I K+ + S ++L+ +
Sbjct: 2007 GDKVSFLGLLDVHPIEQGKEILSLNINNAFEELEKFNDQLGIEKISFEQMSEEQLIESLL 2066
Query: 377 K 377
K
Sbjct: 2067 K 2067
>ref|YP_921784.1| hypothetical protein Noca_0555 [Nocardioides sp. JS614]
gb|ABL80097.1| hypothetical protein Noca_0555 [Nocardioides sp. JS614]
Length = 509
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 5/185 (2%)
Query: 22 FAKSLAHEAINYYKKTGLSCYPWQVNMLIPIMAIDENGLWVHQKYGYAIPRRNGKT---E 78
+ ++ E + + G + P Q +L +D G + R+N KT E
Sbjct: 21 YVVTIGPEVADLVQLFGRTANPEQRLLLDGSFGMDRRGRLAAFEVFVEAARQNLKTGFFE 80
Query: 79 VVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEMSGYVDGEDFISNKAKGQERIE 138
+ + LH+ ++I TAH+ S + + +K+ +E S + + KG + IE
Sbjct: 81 FRALGKALLLHRPMQIW-TAHKESATDQALLDLKQMIEESAELSKRVKRITEGKGGKSIE 139
Query: 139 FKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDNPMTIMCGTP 198
F ++ FR RT G D + +DE ++ E +L T++ N +
Sbjct: 140 FTNRCTIV-FRPRTGKAGQSMSADDVDLDEYFAVEAKHEGSLLPTMSTRPNAQVGAASSA 198
Query: 199 PTMVS 203
P + S
Sbjct: 199 PHLGS 203
>ref|ZP_02321202.1| helicase family protein [Listeria monocytogenes FSL J2-064]
Length = 276
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Query: 74 NGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLE----MSGYVDGEDFISN 129
+GKTE+++ WAL +G +I + R+ ++K+ + Y D +D
Sbjct: 9 SGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPRLKEAFPSIDIVCLYGDSKDNYQG 68
Query: 130 KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
E+ + +I+F E F ++ IDE + ++ L+Y V
Sbjct: 69 -----EQFVIATTHQLIRFY---------EAFQVIFIDEVDAFPYAKDPFLEYAV----- 109
Query: 190 PMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
M T++ T T + ++++C++G + +
Sbjct: 110 -MKARTKEGSTIIITATPEKKWQEECVRGKRNF 141
>ref|ZP_01933647.1| hypothetical protein LMMG_02022 [Listeria monocytogenes F6900]
gb|EBA33695.1| hypothetical protein LMMG_02022 [Listeria monocytogenes F6900]
Length = 412
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Query: 74 NGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLE----MSGYVDGEDFISN 129
+GKTE+++ WAL +G +I + R+ ++K+ + Y D +D
Sbjct: 124 SGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPRLKEAFPSMDIVCLYGDSKDNYQG 183
Query: 130 KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
E+ + +I+F E F ++ IDE + ++ L+Y V
Sbjct: 184 -----EQFVIATTHQLIRFY---------ETFQVIFIDEVDAFPYAKDPFLEYAV----- 224
Query: 190 PMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
M T++ T T + ++++C++G + +
Sbjct: 225 -MKARAKEGSTIIITATPEKKWQEECIRGKRNF 256
>ref|NP_466036.1| hypothetical protein lmo2513 [Listeria monocytogenes EGD-e]
ref|ZP_01941451.1| hypothetical protein LMRG_01735 [Listeria monocytogenes 10403S]
emb|CAD00591.1| comFA [Listeria monocytogenes]
gb|EBA22649.1| hypothetical protein LMRG_01735 [Listeria monocytogenes 10403S]
Length = 439
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Query: 74 NGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLE----MSGYVDGEDFISN 129
+GKTE+++ WAL +G +I + R+ ++K+ + Y D +D
Sbjct: 124 SGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPRLKEAFPSMDIVCLYGDSKDNYQG 183
Query: 130 KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
E+ + +I+F E F ++ IDE + ++ L+Y V
Sbjct: 184 -----EQFVIATTHQLIRFY---------ETFQVIFIDEVDAFPYAKDPFLEYAV----- 224
Query: 190 PMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
M T++ T T + ++++C+KG + +
Sbjct: 225 -MKARTKEGSTIIITATPEKKWQEECVKGKRNF 256
>ref|ZP_00233707.1| competence protein, putative [Listeria monocytogenes str. 1/2a
F6854]
ref|ZP_01935559.1| hypothetical protein LMOG_01477 [Listeria monocytogenes J0161]
ref|ZP_01939215.1| hypothetical protein LMPG_01299 [Listeria monocytogenes J2818]
gb|EAL06499.1| competence protein, putative [Listeria monocytogenes str. 1/2a
F6854]
gb|EBA20162.1| hypothetical protein LMOG_01477 [Listeria monocytogenes J0161]
gb|EBA25030.1| hypothetical protein LMPG_01299 [Listeria monocytogenes J2818]
Length = 439
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Query: 74 NGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLE----MSGYVDGEDFISN 129
+GKTE+++ WAL +G +I + R+ ++K+ + Y D +D
Sbjct: 124 SGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPRLKEAFPSMDIVCLYGDSKDNYQG 183
Query: 130 KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
E+ + +I+F E F ++ IDE + ++ L+Y V
Sbjct: 184 -----EQFVIATTHQLIRFY---------ETFQVIFIDEVDAFPYAKDPFLEYAV----- 224
Query: 190 PMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
M T++ T T + ++++C++G + +
Sbjct: 225 -MKARAKEGSTIIITATPEKKWQEECIRGKRNF 256
>ref|ZP_01931069.1| hypothetical protein LMIG_01586 [Listeria monocytogenes FSL N3-165]
gb|EBA30888.1| hypothetical protein LMIG_01586 [Listeria monocytogenes FSL N3-165]
Length = 439
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 36/159 (22%)
Query: 74 NGKTEVVYIVQLWALHKGLKI----------LHTAHRISTSHASFEKVKKYLEMSGYVDG 123
+GKTE+++ WAL +G +I L R+ S S + V Y + G
Sbjct: 124 SGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPRLKESFPSIDIVCLYGDSKDNYQG 183
Query: 124 EDFISNKAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYT 183
E F+ + +I+F E F ++ IDE + ++ L+Y
Sbjct: 184 EQFV-----------IATTHQLIRFY---------ETFQVIFIDEVDAFPYAKDPFLEYA 223
Query: 184 VTDSDNPMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
V M T++ T T + ++++C++G + +
Sbjct: 224 V------MKARAKEGSTIIITATPEKKWQEECIRGKRNF 256
>ref|YP_015074.1| helicase family protein [Listeria monocytogenes str. 4b F2365]
ref|ZP_00231467.1| competence protein, putative [Listeria monocytogenes str. 4b H7858]
ref|ZP_01944949.1| hypothetical protein LMSG_02287 [Listeria monocytogenes HPB2262]
gb|AAT05251.1| helicase family protein [Listeria monocytogenes str. 4b F2365]
gb|EAL08690.1| competence protein, putative [Listeria monocytogenes str. 4b H7858]
gb|EBA36029.1| hypothetical protein LMSG_02287 [Listeria monocytogenes HPB2262]
Length = 439
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Query: 74 NGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLE----MSGYVDGEDFISN 129
+GKTE+++ WAL +G +I + R+ ++K+ + Y D +D
Sbjct: 124 SGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPRLKEAFPSIDIVCLYGDSKDNYQG 183
Query: 130 KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
E+ + +I+F E F ++ IDE + ++ L+Y V
Sbjct: 184 -----EQFVIATTHQLIRFY---------EAFQVIFIDEVDAFPYAKDPFLEYAV----- 224
Query: 190 PMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
M T++ T T + ++++C++G + +
Sbjct: 225 -MKARTKEGSTIIITATPEKKWQEECVRGKRNF 256
>gb|AAY57689.1| ORF45 [Human herpesvirus 3]
gb|AAY57761.1| ORF45 [Human herpesvirus 3]
gb|ABE03063.1| putative ATPase subunit of terminase [Human herpesvirus 3]
gb|ABE67178.1| unknown [Human herpesvirus 3]
Length = 356
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 68 YAIPRRNGKT--EVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLEM---SGYVD 122
+ +PRR+GKT V I + A +G+K+ +TAH + FE +K LE + YVD
Sbjct: 265 FLVPRRHGKTWFLVPLIALVMATFRGIKVGYTAHIRKATEPVFEGIKSRLEQWFGANYVD 324
>ref|ZP_01928443.1| hypothetical protein LMHG_01562 [Listeria monocytogenes FSL N1-017]
gb|EBA27881.1| hypothetical protein LMHG_01562 [Listeria monocytogenes FSL N1-017]
Length = 439
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 74 NGKTEVVYIVQLWALHKGLKILHTAHRISTSHASFEKVKKYLE----MSGYVDGEDFISN 129
+GKTE+++ WAL +G +I + R+ ++K+ + Y D +D
Sbjct: 124 SGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPRLKEAFPSIDIVCLYGDSKDNYQG 183
Query: 130 KAKGQERIEFKASGAVIQFRTRTSNGGLGEGFDLLIIDEAQEYTSEQESALKYTVTDSDN 189
E + +I+F E F ++ IDE + ++ L+Y V
Sbjct: 184 -----EHFVIATTHQLIRFY---------EAFQVIFIDEVDAFPYAKDPFLEYAV----- 224
Query: 190 PMTIMCGTPPTMVSTGTVFEAYRKDCLKGNKRY 222
M T++ T T + ++++C++G + +
Sbjct: 225 -MKARTKEGSTIIITATPEKKWQEECVRGKRNF 256
>ref|NP_572214.1| CG15930 CG15930-PA [Drosophila melanogaster]
gb|AAF46021.1| CG15930-PA [Drosophila melanogaster]
Length = 458
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 321 LSIAARTSENKVFVETIDCLSVRNGTQWIINFLKSADIAKVVIDGASGQELLAQEMKDQG 380
+++ +T+++K ET D VR + + N + D+A V ++G ++LLA + Q
Sbjct: 62 IALELKTTDSKPTAETDDQHHVRIFDKMLCNIVVPPDVADVQVNGKPLEQLLATVSERQA 121
Query: 381 LKKPELPKVAEIITAN 396
+ P K+ E+ T N
Sbjct: 122 MNNPGPMKMHELHTGN 137
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 2,222,278,849
Number of sequences in database: 6,515,104
Lambda K H
0.316 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6515104
Number of Hits to DB: 2,092,895,450
Number of extensions: 87898948
Number of successful extensions: 201470
Number of sequences better than 10.0: 76
Number of HSP's gapped: 202605
Number of HSP's successfully gapped: 76
Length of query: 471
Length of database: 2,222,278,849
Length adjustment: 138
Effective length of query: 333
Effective length of database: 1,323,194,497
Effective search space: 440623767501
Effective search space used: 440623767501
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)