Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss6572012	WI_SSAHASNP|NT_009731.13_460780		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	02/12/03	10/10/03	111	Genomic			unknown
ss12192238	WI_SSAHASNP|chr12.NT_009759.15_6167672		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	07/04/03	10/25/06	116	Genomic			unknown
ss15517095	SC_SNP|NT_009759.15_6167672		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	11/14/03	11/22/03	120	Genomic			unknown
ss16339198	PGA-UW-FHCRC|CD9-005775		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	12/19/03	04/07/04	120	Genomic			unknown
ss20938396	SSAHASNP|WGSA-200403-chr12.chr12.NT_009759.15_6167672		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	03/19/04	03/19/04	121	Genomic			unknown
ss24207172	PERLEGEN|afd0897162		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	08/10/04	09/13/04	123	Genomic			unknown
ss40248653	ABI|hCV2645818		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	07/16/05	07/16/05	126	Genomic			unknown
ss69099730	PERLEGEN|PGP00897162		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	01/30/07	03/31/08	127	Genomic			unknown
ss74840206	AFFY|SNP_M-598226		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	08/09/07	08/09/07	128	Genomic			unknown
ss76524466	AFFY|AFFY_6_1M_SNP_A-8385389		fwd/T	A/G	acacataccacataca	caatagaactctccta	08/28/07	08/30/07	130	Genomic			unknown
ss78049320	HGSV|Cor12878_SNV_20070510.chr12_6183672		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	10/17/07	10/17/07	129	Genomic			unknown
ss78531946	HGSV|Cor18507_SNV_20070510.chr12_6183672		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	10/19/07	10/19/07	129	Genomic			unknown
ss81760263	HGSV|Cor19240_SNV_20070510.chr12_6183672		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	11/30/07	12/01/07	130	Genomic			unknown
ss84238878	HGSV|Cor19129_SNV_20070510.chr12_6183672		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	12/06/07	12/06/07	130	Genomic			unknown
ss84271624	HGSV|Cor18517_SNV_20070510.chr12_6183672		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	12/06/07	12/06/07	130	Genomic			unknown
ss88937627	BCMHGSC_JDW|JWB-0512426		fwd/T	A/G	aacccaacacccctacacataccacataca	caatagaactctcctacacaacccaaaata	02/26/08	02/28/08	129	Genomic			unknown

Fasta sequence   (Legend)

 GCAAAAGAGG GAAAGGTTTG GCTATACTGA CAGAGCCCAA TCCCCTCCCC ACCTCCCTCA
 GCCCCTTTGC TTACTGTCTC TCATGCCTCG CTCACTGATG GAAACAGCAG TGTGGGGCTG
 GGAGGTCTCT TTCCCAAGAA ACCATATCCC CTAGACCTAG GGGAGGCTGG Tgcgaaacac
 agagacctac actgggaatt cagagacctg gatgtgagcc cagctctgtc ctcaactcac
 tttgaaacct tgggttggtc acttctgtgc tctaagcctc agtttcctca tctgtaaaac
 aatagcttgg aacaaatggt ctcaaaaggt cctttcaagc tcagtctatg aACCCAACAC
 CCCTACACAT ACCACATACA
 R
 CAATAGAACT CTCCTACACA ACCCAAAATA GGAACCAAta ttgggtacga tgtatactat
 gttggtgatg gtcacattaa aagcccagac ttcaccatgt gtaacaaaac tacattcgtg
 tcccctaaat ctataaataa taatataata aacaaaaTAC AAGCCCTGAA TTGGAAATGG
 GAGATGGATA CCAAGGCTTG AGTCCTCAGA ACTTAGCTTT TCTTGGCCTT TACCTCTGGA
 GCAAGAGCCC AGCTGGTGCT TTTCTTTGCT GTTGCTTCTC AGTTCCCTCT CCTCACCCTG
 GGTGGGGTCT CTCTCAGGG

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_009759->NM_001769 function

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss12192238	HapMap-CEU	European	120	IG	0.233	0.450	0.317	0.479	0.458	0.542
	HapMap-HCB	Asian	82	IG	0.220	0.463	0.317	0.752	0.451	0.549
	HapMap-JPT	Asian	84	IG	0.405	0.476	0.119		0.643	0.357
	HapMap-YRI	Sub-Saharan African	118	IG		0.068	0.932	1.000	0.034	0.966
	CHMJ	Asian	74	IG					0.392	0.608
ss16339198	PGA-AFRICAN-PANEL	African American	42	IG		0.095	0.905	1.000	0.048	0.952
	PGA-EUROPEAN-PANEL	European	46	IG	0.304	0.609	0.087	0.200	0.609	0.391
ss24207172	AFD_EUR_PANEL	European	46	IG	0.261	0.652	0.087	0.100	0.587	0.413
	AFD_AFR_PANEL	African American	46	IG		0.130	0.870	0.752	0.065	0.935
	AFD_CHN_PANEL	Asian	48	IG	0.125	0.667	0.208	0.100	0.458	0.542
ss69099730	HapMap-CEU	European	120	GF	0.233	0.450	0.317		0.458	0.542
	HapMap-HCB	Asian	90	GF	0.222	0.467	0.311		0.456	0.544
	HapMap-JPT	Asian	90	GF	0.400	0.489	0.111		0.644	0.356
	HapMap-YRI	Sub-Saharan African	120	GF		0.083	0.917		0.042	0.958

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	YES