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An organized view of the transcripome



Library:739 (dbEST ID)

Placenta II

Library Description

Organism:Homo sapiens
Developmental stage:fetus
Organ:placenta
Tissue:placenta
Vector:pBluescript SK-
Cloning site 1:EcoRI
Cloning site 2:XhoI

Source: Kerlavage, AR, The Institute for Genomic Research

Gene Content Analysis

669 ESTs from this library were grouped into 412 UniGene entries (putative genes) [UniGene build #218, 05-Jan-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs TPM   UniGene Entry
1 1495 Hs.650174 Major histocompatibility complex, class I, E.
1 1495 Hs.648974 Zinc finger protein 852.
1 1495 Hs.647430 Scavenger receptor class F, member 1.
1 1495 Hs.647044 Transducin (beta)-like 2.
1 1495 Hs.645344 Transcribed locus, strongly similar to NP_775462.2 ribosomal protein L13A [Rattus norvegicus].
1 1495 Hs.643683 Integral membrane protein 2B.
1 1495 Hs.64016 Protein S (alpha).
1 1495 Hs.636480 Tubulin, beta.
1 1495 Hs.633514 TIMP metallopeptidase inhibitor 2.
1 1495 Hs.633217 Transcribed locus.
1 1495 Hs.632726 Ribosomal protein S26.
1 1495 Hs.632314 Paired immunoglobin-like type 2 receptor beta.
1 1495 Hs.632282 Solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5.
1 1495 Hs.628678 Vimentin.
1 1495 Hs.620596 Solute carrier family 35, member E1.
1 1495 Hs.612332 Sterile alpha motif domain containing 4B.
1 1495 Hs.609604 Transcribed locus.
1 1495 Hs.609247 Transcribed locus.
1 1495 Hs.600840 CDNA clone IMAGE:4902949.
1 1495 Hs.599281 Transcribed locus.
1 1495 Hs.597488 Transcribed locus.
1 1495 Hs.597166 Transcribed locus.
1 1495 Hs.595781 Transcribed locus.
1 1495 Hs.594925 Transcribed locus.
1 1495 Hs.592081 STIP1 homology and U-box containing protein 1.
1 1495 Hs.591650 Zinc finger protein 654.
1 1495 Hs.591528 Similar to ribosomal protein L35.
1 1495 Hs.591504 Ring finger protein 19B.
1 1495 Hs.591488 Chromosome 1 open reading frame 25.
1 1495 Hs.587979 Prostate tumor overexpressed 1.
1 1495 Hs.586950 CDNA FLJ38419 fis, clone FEBRA2009846.
1 1495 Hs.584939 Transcribed locus, strongly similar to NP_058849.1 ribosomal protein S3a [Rattus norvegicus].
1 1495 Hs.584901 G-protein signaling modulator 2 (AGS3-like, C. elegans).
1 1495 Hs.584801 Splicing factor, arginine/serine-rich 2.
1 1495 Hs.584748 CDC-like kinase 3.
1 1495 Hs.576320 Chromosome 4 open reading frame 34.
1 1495 Hs.570979 Transcribed locus, strongly similar to XP_422423.1 PREDICTED: similar to ribosomal protein S8 [Gallus gallus].
1 1495 Hs.567352 Transcribed locus, strongly similar to NP_084027.1 ribosomal protein L18A [Mus musculus].
1 1495 Hs.567261 MAP/microtubule affinity-regulating kinase 2.
1 1495 Hs.555915 Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2.
1 1495 Hs.547172 MAM domain containing 2.
1 1495 Hs.546289 Ribosomal protein S12.
1 1495 Hs.546288 Ribosomal protein S9.
1 1495 Hs.546259 H3 histone, family 3A.
1 1495 Hs.544577 Glyceraldehyde-3-phosphate dehydrogenase.
1 1495 Hs.534579 Coiled-coil domain containing 107.
1 1495 Hs.534450 ORM1-like 2 (S. cerevisiae).
1 1495 Hs.534255 Transcribed locus, strongly similar to NP_004039.1 beta-2-microglobulin precursor [Homo sapiens].
1 1495 Hs.534041 Ribosomal RNA processing 7 homolog A (S. cerevisiae).
1 1495 Hs.533782 Keratin 8.
1 1495 Hs.533717 Delta-like 1 homolog (Drosophila).
1 1495 Hs.533624 H3 histone, family 3A.
1 1495 Hs.531856 Centromere protein L.
1 1495 Hs.529517 Lactotransferrin.
1 1495 Hs.529322 ATG16 autophagy related 16-like 1 (S. cerevisiae).
1 1495 Hs.528007 U2 small nuclear RNA auxiliary factor 2.
1 1495 Hs.527193 Ribosomal protein S23.
1 1495 Hs.526521 Malate dehydrogenase 1, NAD (soluble).
1 1495 Hs.525549 BTB (POZ) domain containing 7.
1 1495 Hs.523004 Prosaposin.
1 1495 Hs.522699 Cytochrome c oxidase subunit VIIb.
1 1495 Hs.521969 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa.
1 1495 Hs.520814 Tensin 3.
1 1495 Hs.520205 Eukaryotic translation initiation factor 2-alpha kinase 1.
1 1495 Hs.519738 Transcribed locus, strongly similar to XP_862901.1 PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 5 [Canis familiaris].
1 1495 Hs.518464 Proteasome (prosome, macropain) 26S subunit, non-ATPase, 2.
1 1495 Hs.518326 Stress-associated endoplasmic reticulum protein 1.
1 1495 Hs.516769 EF-hand domain family, member D1.
1 1495 Hs.516217 UDP-glucose pyrophosphorylase 2.
1 1495 Hs.515104 Syntaxin binding protein 2.
1 1495 Hs.514581 Actin, gamma 1.
1 1495 Hs.514489 WW domain binding protein 2.
1 1495 Hs.514220 Granulin.
1 1495 Hs.513617 Matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase).
1 1495 Hs.512773 Usher syndrome 1C binding protein 1.
1 1495 Hs.512461 G protein-coupled receptor 107.
1 1495 Hs.510939 Solute carrier family 12 (potassium/chloride transporters), member 6.
1 1495 Hs.510635 Immunoglobulin heavy constant gamma 1 (G1m marker).
1 1495 Hs.510078 Serum/glucocorticoid regulated kinase 1.
1 1495 Hs.509622 Ral guanine nucleotide dissociation stimulator-like 2.
1 1495 Hs.509585 Transcribed locus, strongly similar to NP_037098.1 heat shock 10 kDa protein 1 [Rattus norvegicus].
1 1495 Hs.507584 Polymerase (RNA) I polypeptide D, 16kDa.
1 1495 Hs.507122 SET domain containing 1B.
1 1495 Hs.505934 Transmembrane BAX inhibitor motif containing 4.
1 1495 Hs.503546 Fatty acid desaturase 1.
1 1495 Hs.501203 TIA1 cytotoxic granule-associated RNA binding protein-like 1.
1 1495 Hs.500721 MMS19 nucleotide excision repair homolog (S. cerevisiae).
1 1495 Hs.494691 Profilin 1.
1 1495 Hs.494614 BAT2 domain containing 1.
1 1495 Hs.491148 Pericentriolar material 1.
1 1495 Hs.490551 Ubiquitin associated protein 2-like.
1 1495 Hs.489142 Collagen, type I, alpha 2.
1 1495 Hs.488240 Uridine phosphorylase 1.
1 1495 Hs.486360 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G.
1 1495 Hs.485262 Mitochondrial carrier homolog 1 (C. elegans).
1 1495 Hs.485233 Transcribed locus.
1 1495 Hs.485081 Hypothetical protein LOC100132742.
1 1495 Hs.484289 Hypothetical protein FLJ10404.
1 1495 Hs.482868 Tetratricopeptide repeat domain 37.
1 1495 Hs.482587 Secretory carrier membrane protein 1.

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Source: NCBI UniGene

EST Sequences

741 EST sequences from this library have been submitted to the public sequence database as of 05-Jan-2009.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

  • placenta
  • normal
  • adult
  • female
  • non-normalized
  • bulk

Source: NCBI Clone Registry



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